Citrus Sinensis ID: 016111
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | 2.2.26 [Sep-21-2011] | |||||||
| P51075 | 395 | Chalcone synthase OS=Betu | N/A | no | 0.987 | 0.987 | 0.672 | 1e-162 | |
| P51090 | 393 | Chalcone synthase OS=Viti | yes | no | 0.987 | 0.992 | 0.675 | 1e-161 | |
| P16107 | 398 | Chalcone synthase OS=Petr | N/A | no | 0.977 | 0.969 | 0.666 | 1e-161 | |
| Q9SEP4 | 391 | Chalcone synthase OS=Arab | N/A | no | 0.969 | 0.979 | 0.668 | 1e-159 | |
| Q9SEP2 | 395 | Chalcone synthase OS=Card | N/A | no | 0.969 | 0.969 | 0.668 | 1e-159 | |
| P17818 | 394 | Chalcone synthase OS=Matt | N/A | no | 0.969 | 0.972 | 0.665 | 1e-159 | |
| Q9ZS40 | 397 | Chalcone synthase 2 OS=Da | N/A | no | 0.977 | 0.972 | 0.656 | 1e-159 | |
| Q9XJ57 | 391 | Chalcone synthase 2 OS=Ci | no | no | 0.984 | 0.994 | 0.661 | 1e-159 | |
| P13114 | 395 | Chalcone synthase OS=Arab | yes | no | 0.969 | 0.969 | 0.665 | 1e-158 | |
| P13417 | 395 | Chalcone synthase 3 OS=Si | N/A | no | 0.967 | 0.967 | 0.667 | 1e-158 |
| >sp|P51075|CHSY_BETPN Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 570 bits (1470), Expect = e-162, Method: Compositional matrix adjust.
Identities = 263/391 (67%), Positives = 321/391 (82%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ + Q+ G AT+LAIGTA P NCI QADYPDYYFR+T SDHMT LK+KFKR+C
Sbjct: 1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY ++ E+IL +NPN+CAY SLD+RQ I+V EVPKLG+EAATKAIKEWGQ
Sbjct: 61 DKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAA+I+GA+PDT++ E+PLF++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
+S AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 ISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E+KLGLK++KL ATRHVLSEYGNM V FILDE+RR S E GKV
Sbjct: 300 WIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKV 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
TTGEGLEWGV+FG G G+TV+TVVL S P P
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSVPVP 390
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Betula pendula (taxid: 3505) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|P51090|CHSY_VITVI Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 320/391 (81%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E PLF++
Sbjct: 181 NAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ELPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHSVSAP 390
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The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Vitis vinifera (taxid: 29760) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P16107|CHSY_PETCR Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1 | Back alignment and function description |
|---|
Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust.
Identities = 258/387 (66%), Positives = 322/387 (83%), Gaps = 1/387 (0%)
Query: 3 KVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEK 62
++++ +N+Q+ G A ILAIGTA P NC+YQADYPDYYFR+TNS+HMT LK KFKR+CEK
Sbjct: 8 EIEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEK 67
Query: 63 SNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKS 122
S ++KRY H+TE+ LK+NPN+CAY+ SLD+RQD++V EVP+LG+EAA+KAIKEWGQ KS
Sbjct: 68 SMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQPKS 127
Query: 123 QITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNP 182
+ITHLIFC+ GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN
Sbjct: 128 KITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNA 187
Query: 183 GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242
GARVLVVCS+++ TFRGPSD++L L GQALFGDGAAA+I+G++PD ++ E+PLFQ++S
Sbjct: 188 GARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSV-ERPLFQLIS 246
Query: 243 GAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWI 302
AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF P GI DWNSLFWI
Sbjct: 247 AAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWI 306
Query: 303 VQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362
PGGPAI++Q+E KLGLK++K+ ATR VLS+YGNM V FILDE+R+KS EEGK TT
Sbjct: 307 AHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATT 366
Query: 363 GEGLEWGVMFGIGAGVTVDTVVLRSFP 389
GEGL+WGV+FG G G+TV+TVVL S P
Sbjct: 367 GEGLDWGVLFGFGPGLTVETVVLHSVP 393
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Petroselinum crispum (taxid: 4043) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9SEP4|CHSY_ARAAL Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1 | Back alignment and function description |
|---|
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 256/383 (66%), Positives = 314/383 (81%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A IL IGTANPPN + QA+YPDYYFR+TNSDHMT LK+KFKR+C+KS ++K
Sbjct: 9 RKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRK 68
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ H+TE+ LK+NP +CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH+
Sbjct: 69 RHMHLTEEFLKENPKMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHV 128
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 129 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVL 188
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAALI+G++PDT++ EKP+F++VS AQTI
Sbjct: 189 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTI 248
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NIEK LDEAF P GI DWNSLFWI PGG
Sbjct: 249 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGG 308
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+E KLGLK +K+ ATRHVLSEYGNM V FILDE+R+KSA++G TTGEGLE
Sbjct: 309 PAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGAATTGEGLE 368
Query: 368 WGVMFGIGAGVTVDTVVLRSFPF 390
WGV+FG G G+TV+TVVL S P
Sbjct: 369 WGVLFGFGPGLTVETVVLHSVPL 391
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Arabis alpina (taxid: 50452) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9SEP2|CHSY_CARAN Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1 | Back alignment and function description |
|---|
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 256/383 (66%), Positives = 315/383 (82%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++K
Sbjct: 13 RKAQRADGPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRK 72
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ HVTE+ LK+NPN+CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITHL
Sbjct: 73 RHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHL 132
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 133 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVL 192
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAALI+G++PDT++ EKP+F++VS AQTI
Sbjct: 193 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTI 252
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NIEK LDEAF P GI DWNSLFWI PGG
Sbjct: 253 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGG 312
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+E KLGLK++K+ ATRHV+ EYGNM V FILDE+R+KSA++G TTGEGLE
Sbjct: 313 PAILDQVEIKLGLKEEKMRATRHVMREYGNMSSACVLFILDEMRKKSAKDGVATTGEGLE 372
Query: 368 WGVMFGIGAGVTVDTVVLRSFPF 390
WGV+FG G G+TV+TVVL S P
Sbjct: 373 WGVLFGFGPGLTVETVVLHSVPL 395
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Cardamine amara (taxid: 50461) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P17818|CHSY_MATIN Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust.
Identities = 255/383 (66%), Positives = 315/383 (82%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A IL IGTANP N + QA+YPDYYFR+TNS+HMT LK+KF+R+C+KS ++K
Sbjct: 12 RKAQRADGPAGILGIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFQRMCDKSMIRK 71
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ H+TED LK+NPN+CAY SLD+RQDI+V EVPKLG+EAA +AIKEWGQ KS+ITHL
Sbjct: 72 RHMHLTEDFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVRAIKEWGQPKSKITHL 131
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 132 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVL 191
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAALI+G++PDT++ EKP+F++VS AQTI
Sbjct: 192 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTI 251
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NIEK L+EAF P GI DWNSLFWI PGG
Sbjct: 252 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGG 311
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+E KLGLK +K+ ATRHVLSEYGNM V FILDE+R+KSA++G TTGEGLE
Sbjct: 312 PAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAQDGVATTGEGLE 371
Query: 368 WGVMFGIGAGVTVDTVVLRSFPF 390
WGV+FG G G+TV+TVVLRS P
Sbjct: 372 WGVLFGFGPGLTVETVVLRSVPL 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Matthiola incana (taxid: 3724) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9ZS40|CHS2_DAUCA Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust.
Identities = 254/387 (65%), Positives = 319/387 (82%), Gaps = 1/387 (0%)
Query: 3 KVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEK 62
++++ + +Q+ G A ILAIGTA P NC+YQADYPDYYFR+TNS+HM+ LK KFKR+CEK
Sbjct: 7 EIEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEK 66
Query: 63 SNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKS 122
S ++KRY H+TE+ LK+NPN+CAY+ SLD+RQD++V EVP+LG+EAA KAIKEWG KS
Sbjct: 67 SMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAAAKAIKEWGHPKS 126
Query: 123 QITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNP 182
+ITHLIFC+ GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AENN
Sbjct: 127 KITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNT 186
Query: 183 GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242
GARVLVVCS+++ TFRGPSD++L L GQALFGDGAAA+I+G++PD ++ E+PLFQ++S
Sbjct: 187 GARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSV-ERPLFQLIS 245
Query: 243 GAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWI 302
AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF P GI DWNSLFWI
Sbjct: 246 AAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWI 305
Query: 303 VQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362
PGGPAI++Q+E KLGLK++K+ ATR VLS+YGNM V FILDE+R+KS EEGK TT
Sbjct: 306 AHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATT 365
Query: 363 GEGLEWGVMFGIGAGVTVDTVVLRSFP 389
G+GL+WGV+FG G G+TV+TVVL S P
Sbjct: 366 GDGLDWGVLFGFGPGLTVETVVLHSVP 392
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9XJ57|CHS2_CITSI Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1443), Expect = e-159, Method: Compositional matrix adjust.
Identities = 258/390 (66%), Positives = 320/390 (82%), Gaps = 1/390 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ +N Q+ G AT+LAIGTA P + + QADYPDYYFR+T S+HMT LK+KFKR+C
Sbjct: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY ++TE+ILK+NPN+CAY SLD+RQDI+V EVPKLG+EAATKAIKEWGQ
Sbjct: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHLIFC+ GVDMPGADYQLTK++GL PSVKR M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAA+I+GA+PDT++ E+PL+Q+
Sbjct: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS +QTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNS+F
Sbjct: 240 VSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E+KLGLK +KL ATR VLSEYGNM V FILDE+R+KS EE K
Sbjct: 300 WIAHPGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKA 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390
TTGEGL+WGV+FG G G+TV+TVVL S P
Sbjct: 360 TTGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Citrus sinensis (taxid: 2711) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P13114|CHSY_ARATH Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 255/383 (66%), Positives = 315/383 (82%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++K
Sbjct: 13 RQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRK 72
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ H+TE+ LK+NP++CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH+
Sbjct: 73 RHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHV 132
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 133 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVL 192
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAALI+G++PDT++ EKP+F++VS AQTI
Sbjct: 193 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTI 252
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NI K LDEAF P GI DWNSLFWI PGG
Sbjct: 253 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGG 312
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+E KLGLK++K+ ATRHVLSEYGNM V FILDE+RRKSA++G TTGEGLE
Sbjct: 313 PAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLE 372
Query: 368 WGVMFGIGAGVTVDTVVLRSFPF 390
WGV+FG G G+TV+TVVL S P
Sbjct: 373 WGVLFGFGPGLTVETVVLHSVPL 395
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P13417|CHS3_SINAL Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1440), Expect = e-158, Method: Compositional matrix adjust.
Identities = 255/382 (66%), Positives = 312/382 (81%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++K
Sbjct: 13 RKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRK 72
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ H+TE+ LK NPN+CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH+
Sbjct: 73 RHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHV 132
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 133 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVL 192
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAA+I+G++PDT++ EKP+F++VS AQTI
Sbjct: 193 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAAIIVGSDPDTSVGEKPIFEMVSAAQTI 252
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NIEK LDEAF P GI DWNSLFWI PGG
Sbjct: 253 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGG 312
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++ +E KLGLK +K+ ATRHVLSEYGNM V FILDE+RRKS E+G TTGEGLE
Sbjct: 313 PAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGVATTGEGLE 372
Query: 368 WGVMFGIGAGVTVDTVVLRSFP 389
WGV+FG G G+TV+TVVL S P
Sbjct: 373 WGVLFGFGPGLTVETVVLHSVP 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Sinapis alba (taxid: 3728) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | ||||||
| 3288721 | 393 | chalcone synthase [Vitis vinifera] | 0.987 | 0.992 | 0.675 | 1e-161 | |
| 346577498 | 393 | chalcone synthase [Dimocarpus longan] | 0.984 | 0.989 | 0.676 | 1e-160 | |
| 225451637 | 393 | PREDICTED: chalcone synthase [Vitis vini | 0.987 | 0.992 | 0.675 | 1e-160 | |
| 18376655 | 393 | chalcone synthase [Vitis vinifera] | 0.979 | 0.984 | 0.682 | 1e-160 | |
| 239949924 | 393 | CHS4 [Vitis labrusca x Vitis vinifera] | 0.987 | 0.992 | 0.670 | 1e-160 | |
| 6166004 | 395 | RecName: Full=Chalcone synthase; AltName | 0.987 | 0.987 | 0.672 | 1e-160 | |
| 375364633 | 389 | chalcone synthase [Acacia confusa] | 0.982 | 0.997 | 0.668 | 1e-160 | |
| 1705846 | 393 | RecName: Full=Chalcone synthase; AltName | 0.987 | 0.992 | 0.675 | 1e-160 | |
| 223953610 | 393 | chalcone synthase [Vitis rotundifolia] | 0.979 | 0.984 | 0.677 | 1e-159 | |
| 54311699 | 391 | chalcone synthase [Dictamnus albus] | 0.984 | 0.994 | 0.674 | 1e-159 |
| >gi|3288721|dbj|BAA31259.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 321/391 (82%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF++
Sbjct: 181 NAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKA 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHSVSAP 390
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|346577498|gb|AEO36981.1| chalcone synthase [Dimocarpus longan] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/390 (67%), Positives = 323/390 (82%), Gaps = 1/390 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M +++ + Q+ G A ILAIGTA P NC+ QADYPDYYFR+TNS+HMT LK+KF+R+C
Sbjct: 1 MAGIEEIRKAQRAEGPANILAIGTATPANCVLQADYPDYYFRITNSEHMTELKEKFQRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY H+TEDILK+NPN+CAY S+D+RQDI+V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 DKSMIKKRYMHLTEDILKENPNMCAYMAPSIDARQDIVVVEVPKLGKEAAQKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAA+IIGA+PDT++ E+PLFQ+
Sbjct: 181 NKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIIGADPDTSI-ERPLFQL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNS+F
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGINDWNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+EAKLGLK++KL ATRHVLSEYGNM V FILDE+RRK EEGK+
Sbjct: 300 WIAHPGGPAILDQVEAKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRKCLEEGKL 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390
TTGEGL+WGV+FG G G+TV+TVVL S P
Sbjct: 360 TTGEGLDWGVLFGFGPGLTVETVVLPSVPI 389
|
Source: Dimocarpus longan Species: Dimocarpus longan Genus: Dimocarpus Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451637|ref|XP_002276946.1| PREDICTED: chalcone synthase [Vitis vinifera] gi|122893266|gb|ABM67586.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 321/391 (82%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF++
Sbjct: 181 NAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHSVSAP 390
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18376655|dbj|BAB84112.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 319/388 (82%), Gaps = 1/388 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVGEIRKSQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF++
Sbjct: 181 NAGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPDTKI-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSF 388
TTGEGLEWGV+FG G G+TV+TVVL S
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSL 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|239949924|gb|ACS36661.1| CHS4 [Vitis labrusca x Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/391 (67%), Positives = 320/391 (81%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVC +++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF++
Sbjct: 181 NAGSRVLVVCPEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKA 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+T++TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTIETVVLHSVSAP 390
|
Source: Vitis labrusca x Vitis vinifera Species: Vitis labrusca x Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6166004|sp|P51075.2|CHSY_BETVE RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase gi|1834387|emb|CAA71904.1| chalcone synthase [Betula pendula] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/391 (67%), Positives = 321/391 (82%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ + Q+ G AT+LAIGTA P NCI QADYPDYYFR+T SDHMT LK+KFKR+C
Sbjct: 1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY ++ E+IL +NPN+CAY SLD+RQ I+V EVPKLG+EAATKAIKEWGQ
Sbjct: 61 DKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAA+I+GA+PDT++ E+PLF++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
+S AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 ISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E+KLGLK++KL ATRHVLSEYGNM V FILDE+RR S E GKV
Sbjct: 300 WIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKV 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
TTGEGLEWGV+FG G G+TV+TVVL S P P
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSVPVP 390
|
Source: Betula pendula Species: Betula pendula Genus: Betula Family: Betulaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375364633|gb|AFA55180.1| chalcone synthase [Acacia confusa] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/389 (66%), Positives = 323/389 (83%), Gaps = 1/389 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ +N Q+ G ATILA GTA P NC+ QADYPDYYFR+T S+HMT LK+KFKR+C
Sbjct: 1 MVTVEEIRNAQRSRGPATILAFGTATPSNCVLQADYPDYYFRITQSEHMTDLKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS +KKRY H+TE++LK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMIKKRYMHLTEELLKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT++ E+P+F++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSV-ERPIFEM 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNS+F
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
W+ PGGPAI++Q+EAKLGLK++KL+ TRH+LSEYG+M V FILDE+RR+S +EGK
Sbjct: 300 WVAHPGGPAILDQVEAKLGLKEEKLATTRHILSEYGDMSSACVIFILDELRRRSVKEGKA 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
TTGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSVP 388
|
Source: Acacia confusa Species: Acacia confusa Genus: Acacia Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1705846|sp|P51090.1|CHSY_VITVI RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase gi|499038|emb|CAA53583.1| chalcone synthase [Vitis vinifera] gi|295814493|gb|ADG35962.1| chalcone synthase [Vitis hybrid cultivar] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 320/391 (81%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G AT+LAIGTA P NC+YQADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS + KRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E PLF++
Sbjct: 181 NAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ELPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHSVSAP 390
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223953610|gb|ACN30003.1| chalcone synthase [Vitis rotundifolia] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 320/388 (82%), Gaps = 1/388 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + +N Q+ G AT++AIGTA PPNC+ Q+ YPDYYFR+TNS+H T LK+KFKR+C
Sbjct: 1 MVTVNEVRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 DKSMIKKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF++
Sbjct: 181 NAGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPDTKI-ERPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNSLF
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFNPIGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSF 388
TTGEGLEWGV+FG G G+TV+TVVL S
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSL 387
|
Source: Vitis rotundifolia Species: Vitis rotundifolia Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|54311699|emb|CAH61575.1| chalcone synthase [Dictamnus albus] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/390 (67%), Positives = 320/390 (82%), Gaps = 1/390 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ ++ G ATILAIGTA P N + QADYPDYYFR+T S+HMT LK+KFKR+C
Sbjct: 1 MATVEEIIKAKRAEGPATILAIGTATPANSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY H+TEDILK+NPN+CAY SLD+RQD++V EVPKLG+EAATKAIKEWGQ
Sbjct: 61 DKSMIKKRYMHLTEDILKENPNMCAYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAALI+GA+PDTT+ E+PL+Q+
Sbjct: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAALIVGADPDTTV-ERPLYQL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS +QTILP SD + G RE+GLT HL K+V ++S+NIEK L EAFSP GI DWNS+F
Sbjct: 240 VSASQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFSPIGINDWNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KLGLK++KL ATRHVLSEYGNM V FILDE+R+K EEGK
Sbjct: 300 WIAHPGGPAILDQVEEKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKCVEEGKA 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390
TTGEGL+WGV+FG G G+TV+TVVL S P
Sbjct: 360 TTGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
|
Source: Dictamnus albus Species: Dictamnus albus Genus: Dictamnus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | ||||||
| TAIR|locus:2159098 | 395 | TT4 "TRANSPARENT TESTA 4" [Ara | 0.967 | 0.967 | 0.667 | 4.8e-142 | |
| UNIPROTKB|Q8RVK9 | 389 | CHS "Naringenin-chalcone synth | 0.977 | 0.992 | 0.656 | 4.3e-141 | |
| UNIPROTKB|Q9FUB7 | 390 | Q9FUB7 "Chalcone synthase" [Hy | 0.977 | 0.989 | 0.651 | 4.4e-139 | |
| UNIPROTKB|P30074 | 389 | CHS2 "Chalcone synthase 2" [Me | 0.977 | 0.992 | 0.625 | 4.4e-132 | |
| UNIPROTKB|Q27Z07 | 390 | BIS "Biphenyl synthase" [Sorbu | 0.946 | 0.958 | 0.620 | 2.2e-121 | |
| UNIPROTKB|D2DRC4 | 390 | BIS2 "Biphenyl synthase 2" [So | 0.936 | 0.948 | 0.624 | 5.2e-120 | |
| UNIPROTKB|D2DRC5 | 388 | BIS3 "Biphenyl synthase 3" [So | 0.951 | 0.969 | 0.612 | 1.1e-119 | |
| UNIPROTKB|Q8SAS8 | 395 | Q8SAS8 "Trihydroxybenzophenone | 0.962 | 0.962 | 0.555 | 2.8e-114 | |
| UNIPROTKB|Q8LIL0 | 402 | LOC_Os07g17010 "Curcuminoid sy | 0.951 | 0.935 | 0.494 | 8.4e-97 | |
| TAIR|locus:2116845 | 392 | LAP5 "LESS ADHESIVE POLLEN 5" | 0.956 | 0.964 | 0.394 | 1.2e-72 |
| TAIR|locus:2159098 TT4 "TRANSPARENT TESTA 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
Identities = 255/382 (66%), Positives = 315/382 (82%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ G A ILAIGTANP N + QA+YPDYYFR+TNS+HMT LK+KFKR+C+KS ++K
Sbjct: 13 RQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRK 72
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ H+TE+ LK+NP++CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ KS+ITH+
Sbjct: 73 RHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHV 132
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AENN GARVL
Sbjct: 133 VFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVL 192
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVCS+++ TFRGPSD +L L GQALF DGAAALI+G++PDT++ EKP+F++VS AQTI
Sbjct: 193 VVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTI 252
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G RE+GLT HL K+V ++S+NI K LDEAF P GI DWNSLFWI PGG
Sbjct: 253 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGG 312
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+E KLGLK++K+ ATRHVLSEYGNM V FILDE+RRKSA++G TTGEGLE
Sbjct: 313 PAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLE 372
Query: 368 WGVMFGIGAGVTVDTVVLRSFP 389
WGV+FG G G+TV+TVVL S P
Sbjct: 373 WGVLFGFGPGLTVETVVLHSVP 394
|
|
| UNIPROTKB|Q8RVK9 CHS "Naringenin-chalcone synthase" [Cannabis sativa (taxid:3483)] | Back alignment and assigned GO terms |
|---|
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 254/387 (65%), Positives = 317/387 (81%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ + Q+ G ATI+AIGTA P NC+ Q++YPDYYFR+TNS+H T LK+KFKR+C
Sbjct: 1 MVTVEEFRKAQRAEGPATIMAIGTATPANCVLQSEYPDYYFRITNSEHKTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS ++KRY H+TE+ILK+NPN+CAY+ SLD+RQD++V EVPKLG+EAATKAIKEWGQ
Sbjct: 61 DKSMIRKRYMHLTEEILKENPNLCAYEAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDG+AALI+G++P + EKP+F++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGSAALIVGSDPIPEV-EKPIFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+NIEK L+EAF P GI DWNSLF
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFKPLGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E+KL LK +KL ATRHVLSEYGNM V FILDE+RRK E+G
Sbjct: 300 WIAHPGGPAILDQVESKLALKTEKLRATRHVLSEYGNMSSACVLFILDEMRRKCVEDGLN 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRS 387
TTGEGLEWGV+FG G G+TV+TVVL S
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHS 386
|
|
| UNIPROTKB|Q9FUB7 Q9FUB7 "Chalcone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 252/387 (65%), Positives = 313/387 (80%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ + Q+ G AT++AIGTA PPNC+ QA YPDYYFR+TNS+H LK+KF+R+C
Sbjct: 1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY ++ E++LK+NPN+CAY SLD+RQDI+V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 DKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR+M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGP+D +L L GQALFGDGAAA+IIG++P + EKPLF++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDPIPEV-EKPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP S+ + G RE+GLT HL K+V ++S+N+EK L EAF P GI DWNSLF
Sbjct: 240 VSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+EAKL LK +KL ATRHVLSEYGNM V FILDE+RRKS E+G
Sbjct: 300 WIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLK 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRS 387
TTGEG+EWGV+FG G G+TV+TVVL S
Sbjct: 360 TTGEGIEWGVLFGFGPGLTVETVVLHS 386
|
|
| UNIPROTKB|P30074 CHS2 "Chalcone synthase 2" [Medicago sativa (taxid:3879)] | Back alignment and assigned GO terms |
|---|
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 242/387 (62%), Positives = 305/387 (78%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G ATILAIGTANP NC+ Q+ YPD+YF++TNS+H T LK+KF+R+C
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +K+RY ++TE+ILK+NPN+C Y SLD+RQD++V EVP+LG+EAA KAIKEWGQ
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHLI C+ GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAALI+G++P + EKP+F++
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEI-EKPIFEM 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
V AQTI P S+ + G RE GLT HL K+V +VS+NI K L EAF P GI D+NS+F
Sbjct: 240 VWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KL LK +K++ATR VLSEYGNM V FILDE+R+KS + G
Sbjct: 300 WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLK 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRS 387
TTGEGLEWGV+FG G G+T++TVVLRS
Sbjct: 360 TTGEGLEWGVLFGFGPGLTIETVVLRS 386
|
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| UNIPROTKB|Q27Z07 BIS "Biphenyl synthase" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 234/377 (62%), Positives = 283/377 (75%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
A ILAIGTANPPN YQ DYPD+ FRVT ++H T L++KF RICEKS +KRY H+TE+I
Sbjct: 14 AKILAIGTANPPNVYYQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRKRYLHLTEEI 73
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
LK NP+I Y SLD RQD+L EVPKLG++AA KAIKEWGQ S+ITHLIFC+ VD
Sbjct: 74 LKANPSIYTYGAPSLDVRQDMLNSEVPKLGQQAALKAIKEWGQPISKITHLIFCTASCVD 133
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG 196
MPGAD+QL K+LGLNPSV R M+Y GCY GAT +R+AKDFAENN GARVLVVC++++
Sbjct: 134 MPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVLVVCAEITTV 193
Query: 197 TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVA 256
F G +D +L L GQALF DGA+A+I+GANP+ + E+PLF+IV+ QTI+P S+ V
Sbjct: 194 FFHGLTDTHLDILVGQALFADGASAVIVGANPEPKI-ERPLFEIVACRQTIIPNSEHGVV 252
Query: 257 GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG--IKDWNSLFWIVQPGGPAIVNQI 314
REMG T +LS V V N+ L + F KDWNSLF+ V PGGPAIV+Q+
Sbjct: 253 ANIREMGFTYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHPGGPAIVDQV 312
Query: 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374
E +LGLK+ KL ATRHVLSEYGNMG SV FILD++R+KS EEGK TTGEGLEWGV+ GI
Sbjct: 313 EEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDDMRKKSIEEGKSTTGEGLEWGVVIGI 372
Query: 375 GAGVTVDTVVLRSFPFP 391
G G+TV+T VLRS P
Sbjct: 373 GPGLTVETAVLRSESIP 389
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| UNIPROTKB|D2DRC4 BIS2 "Biphenyl synthase 2" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 233/373 (62%), Positives = 279/373 (74%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
A ILAIGTANPPN YQ DYPD+ FRVT ++H T L++KF RICEKS +KRY ++TE+I
Sbjct: 14 AKILAIGTANPPNVYYQEDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRKRYLYLTEEI 73
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
LK NP I Y SLD RQD+L EVPKLG+EAA KAIKEWGQ S+ITHLIFC+ VD
Sbjct: 74 LKANPCIYTYGAPSLDVRQDMLNPEVPKLGQEAALKAIKEWGQPISKITHLIFCTASCVD 133
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG 196
MPGAD+QL K+LGLNPSV R M+Y GCY GAT +R+AKDFAENN GARVLVVC++++
Sbjct: 134 MPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVLVVCAEITTV 193
Query: 197 TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVA 256
F G +D +L L GQALF DGA+A+I+GANP+ + E PLF+IV+ QTI+P S+ V
Sbjct: 194 FFHGLTDTHLDILVGQALFADGASAVIVGANPEPEI-ESPLFEIVACRQTIIPNSEHGVV 252
Query: 257 GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG--IKDWNSLFWIVQPGGPAIVNQI 314
REMG +LS V V N+ L + F KDWNSLF+ V PGGPAIV+Q+
Sbjct: 253 ANIREMGFNYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHPGGPAIVDQV 312
Query: 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374
E +LGLK+ KL ATRHVLSEYGNMG SV FILDE+R+KS EEGK TTGEGLEWGV+ GI
Sbjct: 313 EEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDEMRKKSIEEGKATTGEGLEWGVVIGI 372
Query: 375 GAGVTVDTVVLRS 387
G G+TV+T VLRS
Sbjct: 373 GPGLTVETAVLRS 385
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| UNIPROTKB|D2DRC5 BIS3 "Biphenyl synthase 3" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 234/382 (61%), Positives = 283/382 (74%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
KN+ Q A ILAIGTANPPN +Q DYPD+ FRVT ++H T L++KF RICEKS KK
Sbjct: 6 KNEPQH---AKILAIGTANPPNVFHQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTKK 62
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
RY H+TE++LK NPNI Y SL+ RQDI EVPKLG+EA+ KAIKEWGQ S+ITHL
Sbjct: 63 RYLHLTEEMLKANPNIYTYGAPSLNVRQDICNIEVPKLGQEASLKAIKEWGQPISKITHL 122
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
IFC+ VDMPG D+QL K+LGL+PSV R M+Y GCY GAT +RMAKDFAENN GARVL
Sbjct: 123 IFCTASCVDMPGCDFQLIKLLGLDPSVTRTMIYEAGCYAGATVLRMAKDFAENNKGARVL 182
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVC++++ F G +D +L L GQALF DGA+A+I+GANP+ + E+PLF+IV+ QTI
Sbjct: 183 VVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPEPEI-ERPLFEIVACRQTI 241
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG--IKDWNSLFWIVQP 305
LP S+ V REMG +LS +V V N+ + + F KDWNSLF+ V P
Sbjct: 242 LPNSEHGVVANIREMGFNYYLSGDVPKFVGGNVVDFMTKTFEKVDGKNKDWNSLFFSVHP 301
Query: 306 GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEG 365
GGPAIV+Q+E KLGLK+ KL ATRHVLSEYGNMG +V FILDE+R KS EEGK TTGEG
Sbjct: 302 GGPAIVDQVEEKLGLKEGKLRATRHVLSEYGNMGAPTVHFILDEMRNKSIEEGKTTTGEG 361
Query: 366 LEWGVMFGIGAGVTVDTVVLRS 387
LEWGV+ GIG G+TV+T VLRS
Sbjct: 362 LEWGVVIGIGPGLTVETAVLRS 383
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| UNIPROTKB|Q8SAS8 Q8SAS8 "Trihydroxybenzophenone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 211/380 (55%), Positives = 280/380 (73%)
Query: 10 QQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRY 69
Q +G A++LAIGT NP + I Q DYPD+YFR TNS+HMT LK+KFKRIC KS+++KR+
Sbjct: 13 QGEGKKRASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRH 72
Query: 70 FHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIF 129
F++TE+ILK+N I Y SLD+RQ IL EVPKLG+EAA KAI EWGQ S+ITH++F
Sbjct: 73 FYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVF 132
Query: 130 CSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVV 189
+ G MPGADY +T++LGLN +V+RVMLY QGC+ G TA+R+AKD AENN GARVLVV
Sbjct: 133 ATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVV 192
Query: 190 CSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249
C++ + TF P++++L + GQA+F DGAAALIIGA PD E+ +F I+S +QTI+P
Sbjct: 193 CAENTAMTFHAPNESHLDVIVGQAMFSDGAAALIIGACPDVASGERAVFNILSASQTIVP 252
Query: 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPA 309
GSD + F EMG++ L ++V + +NI ++EAFSP G+ DWNSLF+ + PGG
Sbjct: 253 GSDGAITAHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRG 312
Query: 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWG 369
I++ + LG+K + L ATRHVL EYGNMG V FILDE+R+ S GK TTG+G E+G
Sbjct: 313 IIDGVAGNLGIKDENLVATRHVLGEYGNMGSACVMFILDELRKSSKVNGKPTTGDGKEFG 372
Query: 370 VMFGIGAGVTVDTVVLRSFP 389
+ G+G G+TV+ VVL+S P
Sbjct: 373 CLIGLGPGLTVEAVVLQSVP 392
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| UNIPROTKB|Q8LIL0 LOC_Os07g17010 "Curcuminoid synthase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 190/384 (49%), Positives = 255/384 (66%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q+ GLA +LAIGTANPPNC+ Q ++PD+YFRVTNSDH+T LK KFKRIC++ V++
Sbjct: 18 RRSQRADGLAAVLAIGTANPPNCVTQEEFPDFYFRVTNSDHLTALKDKFKRICQEMGVQR 77
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
RY H TE++L +P D SLD+R DI VP+L EAA KAI EWG+ + ITHL
Sbjct: 78 RYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHL 137
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+ + G +PG D++L +LGL PSV+R ML+ GC+ G A+R+AKD AEN+ GARVL
Sbjct: 138 VVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVL 197
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VV ++L+L F GP + L Q LFGDGAAA+I+GA+ D E+PLF+IVS AQTI
Sbjct: 198 VVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDV--ERPLFEIVSAAQTI 255
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF----GIKDWNSLFWIV 303
+P SD + +F E L L + V ++ +N+E+CL + F P G WN LFW V
Sbjct: 256 IPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAV 315
Query: 304 QPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG 363
PG I++Q++A LGL+ KL+A+R VLS+YGNM G +V F LDE+RR+ E G
Sbjct: 316 HPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAA--AAG 373
Query: 364 EGLEWGVMFGIGAGVTVDTVVLRS 387
E E GVM G G+TVD ++L +
Sbjct: 374 EWPELGVMMAFGPGMTVDAMLLHA 397
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| TAIR|locus:2116845 LAP5 "LESS ADHESIVE POLLEN 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 151/383 (39%), Positives = 226/383 (59%)
Query: 7 GKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVK 66
G ++ G ATILA+G A P + Q D YF+ T D L KQK R+C+ + VK
Sbjct: 10 GSEKKSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDDPEL-KQKLTRLCKTTTVK 68
Query: 67 KRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITH 126
RY ++E+ILKK P + GS++ R DI V ++ EA+ IK WG+S S ITH
Sbjct: 69 TRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITH 128
Query: 127 LIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARV 186
+++ S +PG D L K LGL+P RV+LYF GC G +R+AKD AENNPG+RV
Sbjct: 129 VVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRV 188
Query: 187 LVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT 246
L+ S+ ++ F+ PS L G ALFGDGA A+IIG++PD + EKPLF++ + Q
Sbjct: 189 LLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDP-ICEKPLFELHTAIQN 247
Query: 247 ILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGI--KDWNSLFWIVQ 304
LP ++ + G+ E G+ LS+ + ++ +N+E + G+ K++N +FW V
Sbjct: 248 FLPETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVH 307
Query: 305 PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGE 364
PGGPAI+N+IE +L L +KLS +R L +YGN S+ ++L+ + +S + + E
Sbjct: 308 PGGPAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESKKVRNMNEEE 367
Query: 365 GLEWGVMFGIGAGVTVDTVVLRS 387
EWG++ G GVT + ++ R+
Sbjct: 368 N-EWGLILAFGPGVTFEGIIARN 389
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9XGX2 | CHS1_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6298 | 0.9822 | 0.9675 | N/A | no |
| Q9XGX1 | CHS7_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6382 | 0.9772 | 0.965 | N/A | no |
| P51090 | CHSY_VITVI | 2, ., 3, ., 1, ., 7, 4 | 0.6751 | 0.9873 | 0.9923 | yes | no |
| P13114 | CHSY_ARATH | 2, ., 3, ., 1, ., 7, 4 | 0.6657 | 0.9696 | 0.9696 | yes | no |
| P51075 | CHSY_BETPN | 2, ., 3, ., 1, ., 7, 4 | 0.6726 | 0.9873 | 0.9873 | N/A | no |
| Q9ZS40 | CHS2_DAUCA | 2, ., 3, ., 1, ., 7, 4 | 0.6563 | 0.9772 | 0.9722 | N/A | no |
| Q9SBL7 | CHS2_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6349 | 0.9822 | 0.9675 | N/A | no |
| Q9SBL6 | CHS3_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6349 | 0.9822 | 0.9675 | N/A | no |
| Q9SBL5 | CHS4_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6401 | 0.9822 | 0.9675 | N/A | no |
| Q9SBL4 | CHS5_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6323 | 0.9822 | 0.9675 | N/A | no |
| Q9SBL3 | CHS6_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6326 | 0.9898 | 0.9750 | N/A | no |
| P51082 | CHSB_PEA | 2, ., 3, ., 1, ., 7, 4 | 0.6563 | 0.9772 | 0.9922 | N/A | no |
| Q9ZRR8 | CHS1_CASGL | 2, ., 3, ., 1, ., 7, 4 | 0.6546 | 0.9797 | 0.9948 | N/A | no |
| P48392 | CHS3_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6398 | 0.9746 | 0.9553 | N/A | no |
| O04111 | CHSY_PERFR | 2, ., 3, ., 1, ., 7, 4 | 0.6487 | 0.9848 | 0.9948 | N/A | no |
| P48390 | CHS1_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6649 | 0.9645 | 0.9572 | N/A | no |
| P06515 | CHSY_ANTMA | 2, ., 3, ., 1, ., 7, 4 | 0.6435 | 0.9848 | 0.9974 | N/A | no |
| O23729 | CHS3_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6333 | 0.9772 | 0.9796 | N/A | no |
| A2ZEX7 | CHS1_ORYSI | 2, ., 3, ., 1, ., 7, 4 | 0.6227 | 0.9772 | 0.9698 | N/A | no |
| O22652 | CHSY_RAPSA | 2, ., 3, ., 1, ., 7, 4 | 0.6623 | 0.9670 | 0.9695 | N/A | no |
| Q9FSB9 | CHS1_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6684 | 0.9670 | 0.9720 | N/A | no |
| Q9FSB8 | CHS2_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6614 | 0.9772 | 0.9821 | N/A | no |
| Q8RVK9 | CHS_CANSA | 2, ., 3, ., 1, ., 7, 4 | 0.6563 | 0.9772 | 0.9922 | N/A | no |
| Q9FUB7 | CHSY_HYPAN | 2, ., 3, ., 1, ., 7, 4 | 0.6511 | 0.9772 | 0.9897 | N/A | no |
| P26018 | CHS1_HORVU | 2, ., 3, ., 1, ., 7, 4 | 0.6330 | 0.9772 | 0.9698 | N/A | no |
| Q9SEP4 | CHSY_ARAAL | 2, ., 3, ., 1, ., 7, 4 | 0.6684 | 0.9696 | 0.9795 | N/A | no |
| Q9SEP2 | CHSY_CARAN | 2, ., 3, ., 1, ., 7, 4 | 0.6684 | 0.9696 | 0.9696 | N/A | no |
| P24825 | CHS2_MAIZE | 2, ., 3, ., 1, ., 7, 4 | 0.6298 | 0.9822 | 0.97 | N/A | no |
| O22045 | CHSD_IPONI | 2, ., 3, ., 1, ., 7, 4 | 0.6478 | 0.9797 | 0.9974 | N/A | no |
| P16107 | CHSY_PETCR | 2, ., 3, ., 1, ., 7, 4 | 0.6666 | 0.9772 | 0.9698 | N/A | no |
| P53415 | CHS2_SECCE | 2, ., 3, ., 1, ., 7, 4 | 0.6347 | 0.9746 | 0.9771 | N/A | no |
| P48388 | CHS3_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6623 | 0.9797 | 0.9948 | N/A | no |
| P13417 | CHS3_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6675 | 0.9670 | 0.9670 | N/A | no |
| P13416 | CHS1_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6649 | 0.9670 | 0.9670 | N/A | no |
| P17818 | CHSY_MATIN | 2, ., 3, ., 1, ., 7, 4 | 0.6657 | 0.9696 | 0.9720 | N/A | no |
| P48385 | CHSY_CALCH | 2, ., 3, ., 1, ., 7, 4 | 0.6623 | 0.9645 | 0.9572 | N/A | no |
| P48387 | CHS2_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6537 | 0.9772 | 0.9922 | N/A | no |
| P48386 | CHS1_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6572 | 0.9797 | 0.9948 | N/A | no |
| Q2R3A1 | CHS1_ORYSJ | 2, ., 3, ., 1, ., 7, 4 | 0.6227 | 0.9772 | 0.9698 | yes | no |
| Q9ZRS4 | CHSY_CATRO | 2, ., 3, ., 1, ., 7, 4 | 0.6511 | 0.9772 | 0.9922 | N/A | no |
| O22047 | CHSE_IPOPU | 2, ., 3, ., 1, ., 7, 4 | 0.6666 | 0.9772 | 0.9922 | N/A | no |
| O22046 | CHSE_IPONI | 2, ., 3, ., 1, ., 7, 4 | 0.6692 | 0.9772 | 0.9922 | N/A | no |
| O23730 | CHS4_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6333 | 0.9772 | 0.9796 | N/A | no |
| O23731 | CHS8_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6333 | 0.9772 | 0.9796 | N/A | no |
| Q9LKP7 | CHSY_DIAMO | 2, ., 3, ., 1, ., 7, 4 | 0.6307 | 0.9848 | 0.9948 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gVvCHS1 | RecName- Full=Chalcone synthase; EC=2.3.1.74; AltName- Full=Naringenin-chalcone synthase;; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (By similarity) (393 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | MYBA1 | SubName- Full=Chromosome chr2 scaffold_97, whole genome shotgun sequence; (174 aa) | • | 0.483 | |||||||
 | F3H | RecName- Full=Naringenin,2-oxoglutarate 3-dioxygenase; EC=1.14.11.9; AltName- Full=Flavonone-3- [...] (363 aa) | • | 0.483 | |||||||
 | GSVIVG00024561001 | SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (717 aa) | • | 0.483 | |||||||
 | GSVIVG00023211001 | SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (710 aa) | • | 0.483 | |||||||
 | GSVIVG00018175001 | SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (723 aa) | • | 0.483 | |||||||
 | GSVIVG00016500001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (752 aa) | • | 0.483 | |||||||
 | GSVIVG00016492001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (797 aa) | • | 0.483 | |||||||
 | GSVIVG00016489001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (766 aa) | • | 0.483 | |||||||
 | UFGT | SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (457 aa) | • | 0.483 | |||||||
 | 4CL | SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (378 aa) | • | 0.483 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 395 | |||
| PLN03172 | 393 | PLN03172, PLN03172, chalcone synthase family prote | 0.0 | |
| PLN03173 | 391 | PLN03173, PLN03173, chalcone synthase; Provisional | 0.0 | |
| PLN03170 | 401 | PLN03170, PLN03170, chalcone synthase; Provisional | 0.0 | |
| pfam00195 | 227 | pfam00195, Chal_sti_synt_N, Chalcone and stilbene | 1e-146 | |
| PLN03171 | 399 | PLN03171, PLN03171, chalcone synthase-like protein | 1e-145 | |
| PLN03168 | 389 | PLN03168, PLN03168, chalcone synthase; Provisional | 1e-143 | |
| cd00831 | 361 | cd00831, CHS_like, Chalcone and stilbene synthases | 1e-140 | |
| PLN03169 | 391 | PLN03169, PLN03169, chalcone synthase family prote | 1e-109 | |
| pfam02797 | 151 | pfam02797, Chal_sti_synt_C, Chalcone and stilbene | 4e-85 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 1e-57 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-43 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 2e-40 | |
| cd00827 | 324 | cd00827, init_cond_enzymes, "initiating" condensin | 2e-39 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 2e-16 | |
| COG3425 | 377 | COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt | 1e-15 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 1e-11 | |
| TIGR00747 | 318 | TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) | 5e-11 | |
| PRK07204 | 329 | PRK07204, PRK07204, 3-oxoacyl-(acyl carrier protei | 1e-08 | |
| PLN00415 | 466 | PLN00415, PLN00415, 3-ketoacyl-CoA synthase | 4e-07 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 6e-07 | |
| TIGR01835 | 379 | TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylgluta | 9e-07 | |
| pfam08541 | 90 | pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- | 1e-05 | |
| PRK12879 | 325 | PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei | 5e-05 | |
| PLN02854 | 521 | PLN02854, PLN02854, 3-ketoacyl-CoA synthase | 4e-04 | |
| PRK09352 | 319 | PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei | 4e-04 | |
| PLN02326 | 379 | PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei | 6e-04 | |
| pfam08545 | 80 | pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr | 0.001 | |
| PRK12880 | 353 | PRK12880, PRK12880, 3-oxoacyl-(acyl carrier protei | 0.004 |
| >gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 581 bits (1498), Expect = 0.0
Identities = 260/391 (66%), Positives = 317/391 (81%), Gaps = 1/391 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
+ + + Q+ G ATILAIG A P NC+ QADYPDYYFR+TNS+HMT LK+KFKR+C
Sbjct: 1 APSIAEIRKAQRAEGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY H+TE+ILK+NPN+CAY SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 DKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL PSVKR M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N G+RVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIGA+PDT + E+PLF+I
Sbjct: 181 NAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEI 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+NIEK L EAF+P GI DWNS+F
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+E KL LK++KL ATRHVLS+YGNM V FILDE+R+KS EEGK
Sbjct: 300 WIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKG 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391
+TGEGLEWGV+FG G G+TV+TVVL S P
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHSVPAE 390
|
Length = 393 |
| >gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 564 bits (1455), Expect = 0.0
Identities = 254/387 (65%), Positives = 311/387 (80%), Gaps = 1/387 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G ATI+AIGT+ PPNC+ Q+ YPDYYFR+TNS+H LK+KFKR+C
Sbjct: 1 MVTVDEIRKAQRAEGPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EKS +KKRY H+TE+ILK+NP++C Y SLD+RQD++V EVPKLG+EAA KAIKEWGQ
Sbjct: 61 EKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GVDMPGADYQLTK+LGL SVKR M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAA+IIG++P + EKPLF++
Sbjct: 181 NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFEL 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQTILP SD + G RE+GLT HL K+V ++S+N+EK L EAF P GI DWNSLF
Sbjct: 240 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++Q+EAKL LK +KL ATRHVLSEYGNM V FILDE+R+KSAE+G
Sbjct: 300 WIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLK 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRS 387
+TGEGLEWGV+FG G G+TV+TVVL S
Sbjct: 360 STGEGLEWGVLFGFGPGLTVETVVLHS 386
|
Length = 391 |
| >gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 556 bits (1434), Expect = 0.0
Identities = 246/389 (63%), Positives = 319/389 (82%), Gaps = 1/389 (0%)
Query: 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKS 63
V++ + Q+ G AT+LAIGTA P NC++QADYPDYYFR+T S+HMT LK+KFKR+C+KS
Sbjct: 8 VEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKS 67
Query: 64 NVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQ 123
++KRY H+TE+ L +NPN+CAY SLD+RQDI+V EVPKLG+ AA KAIKEWGQ KS+
Sbjct: 68 QIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSK 127
Query: 124 ITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPG 183
ITHL+FC+ GVDMPGADYQLTKMLGL PSV R+M+Y QGC+ G T +R+AKD AENN G
Sbjct: 128 ITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRG 187
Query: 184 ARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243
ARVLVVCS+++ TFRGPS+++L + GQALFGDGAAA+I+GA+PD + E+PLFQ+VS
Sbjct: 188 ARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSA 246
Query: 244 AQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV 303
+QTILP S+ + G RE+GLT HL K+V ++S+NIE+ L+EAF P GI D+NS+FW+
Sbjct: 247 SQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVA 306
Query: 304 QPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG 363
PGGPAI++Q+EAK+GL+++++ ATRHVLSEYGNM V FILDE+R++SAE+G+ TTG
Sbjct: 307 HPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTG 366
Query: 364 EGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392
EG +WGV+FG G G+TV+TVVL S P T
Sbjct: 367 EGFDWGVLFGFGPGLTVETVVLHSVPITT 395
|
Length = 401 |
| >gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain | Back alignment and domain information |
|---|
Score = 414 bits (1065), Expect = e-146
Identities = 153/225 (68%), Positives = 185/225 (82%)
Query: 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKS 63
V++ + Q+ G ATILAIGTA P NC+ Q+ YPDYYFRVT S+H+T LK+KF+RICEKS
Sbjct: 3 VEEIRKAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKS 62
Query: 64 NVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQ 123
+KKRY +TE+ILK+NP +C SLD+RQDI V EVPKLG+EAA KAIKEWGQ KS+
Sbjct: 63 TIKKRYMVLTEEILKENPELCTEMAPSLDARQDIAVVEVPKLGKEAALKAIKEWGQPKSK 122
Query: 124 ITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPG 183
ITHL+FC+ GVDMPGADYQLTK+LGL PSVKRVMLY QGC+ G T +R+AKD AENN G
Sbjct: 123 ITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKG 182
Query: 184 ARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228
ARVLVVCS+++ TFRGPS+ +L L GQALFGDGAAA+IIG++P
Sbjct: 183 ARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 227
|
The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain. Length = 227 |
| >gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Score = 417 bits (1074), Expect = e-145
Identities = 191/387 (49%), Positives = 260/387 (67%), Gaps = 9/387 (2%)
Query: 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKS 63
+ + Q+ GLA +LAIGTANP NC+ Q ++PD+YFR T SDH+T LK KFKRIC++
Sbjct: 10 LGEICRAQRADGLAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQEL 69
Query: 64 NVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQ 123
V+KRY H TE++L +P +D SLD+R DI VP+L EAA KAI EWG+ +
Sbjct: 70 GVQKRYLHHTEELLSAHPEFLDHDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAAD 129
Query: 124 ITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPG 183
ITHL+ + G +PG D++L +LGL PSV+R ML+ GC+ GA A+R+AKD AENN G
Sbjct: 130 ITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRG 189
Query: 184 ARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243
ARVLVV ++++L F GP + L Q LFGDGAAA+I+GA+ D +E+PLF+IVS
Sbjct: 190 ARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADA--AERPLFEIVSA 247
Query: 244 AQTILPGSDSDVAGQFREMGLTVHLS-KNVATVVSENIEKCLDEAFSPF----GIKDWNS 298
AQ I+P SD + F E GL ++ + V ++ +NIE+CL +AF+P G +WN
Sbjct: 248 AQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWND 307
Query: 299 LFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358
LFW V PG AI++Q++A LGL+ +KL+A+R VLS+YGNM G +V F LDE+RR+ EE
Sbjct: 308 LFWAVHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQM-EEA 366
Query: 359 KVTTGEGLEWGVMFGIGAGVTVDTVVL 385
G E GVM G G+TVD ++L
Sbjct: 367 A-AAGAWPELGVMMAFGPGLTVDAMLL 392
|
Length = 399 |
| >gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 413 bits (1063), Expect = e-143
Identities = 193/382 (50%), Positives = 263/382 (68%), Gaps = 1/382 (0%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ Q + G A +L IGTA PP Q++YPD++F +TN LK KFKRIC+KS ++K
Sbjct: 7 RGQPRAEGPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRK 66
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ +TE++LK NP IC Y SL+ R DI+V +VPKL EAA KAIKEWG KS ITH+
Sbjct: 67 RHMFLTEEVLKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHI 126
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+F + GV+MPGAD+ L K+LGL P+VKRVM+Y GC+ GA+ +R+AKD AENN GARVL
Sbjct: 127 VFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVL 186
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
V S+++ T+R PS+ +L L G ALFGDGA ++G++P + EK LF++ +TI
Sbjct: 187 AVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETI 245
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGG 307
LP SD + G E GL HL K+V ++S+NIEK L+EA G DWN +FW V PGG
Sbjct: 246 LPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGG 305
Query: 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
PAI++Q+EAKL L + K+ +R +LSE+GNM SV F+LD+IR++S + G T GEG E
Sbjct: 306 PAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSE 365
Query: 368 WGVMFGIGAGVTVDTVVLRSFP 389
+G G G G+T++ +VLR+
Sbjct: 366 FGFFIGFGPGLTLEVLVLRAAA 387
|
Length = 389 |
| >gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Score = 403 bits (1038), Expect = e-140
Identities = 145/374 (38%), Positives = 203/374 (54%), Gaps = 17/374 (4%)
Query: 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVT-- 73
ATILAIGTA PP+ + Q++ D+Y R+ +SDH+ LK+K KR+C K+ ++ RY +
Sbjct: 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGG 60
Query: 74 EDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLV 133
E+ P SLD R DI + E +L EEAA A+ E G S I HL+ +
Sbjct: 61 EETYAPRPE----MSPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST 116
Query: 134 GVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL 193
G P D L LGL P VKR L GC GA A+ +AKD E NPGARVLVV ++L
Sbjct: 117 GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTEL 176
Query: 194 SLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDS 253
+RGP L G ALFGDGAAA+++ +P E+PLF++V A T+LP S+
Sbjct: 177 CSLWYRGPDH--RSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234
Query: 254 DVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKD--WNSLFWIVQPGGPAIV 311
+ E GLT LS++V +V +N+E+ L + + GI W V PGG A++
Sbjct: 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVL 294
Query: 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVM 371
+ +E LGL + L A+R VL YGNM SV ++L + K + + G++
Sbjct: 295 DAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRV-------KRGDRGLL 347
Query: 372 FGIGAGVTVDTVVL 385
G G T ++ V
Sbjct: 348 IAFGPGFTCESAVW 361
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361 |
| >gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 326 bits (838), Expect = e-109
Identities = 156/388 (40%), Positives = 225/388 (57%), Gaps = 12/388 (3%)
Query: 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKS 63
K G + G ATILA+G A P + Q D YFR T D L K+K +R+C+ +
Sbjct: 9 SKAGSRRAANPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPAL-KEKLERLCKTT 67
Query: 64 NVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQ 123
VK RY ++++IL K P + ++ R DI V ++ EA+ IKEWG+ S
Sbjct: 68 TVKTRYVVMSKEILDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSD 127
Query: 124 ITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPG 183
ITHL++ S +PG D L K LGL+P V+RVMLYF GC G +R+AKD AENNPG
Sbjct: 128 ITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPG 187
Query: 184 ARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243
+RVL+ S+ ++ FR PS L G ALFGDGAAA+IIGA+P +SE P F++ +
Sbjct: 188 SRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADP-IPVSESPFFELHTA 246
Query: 244 AQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIE----KCLDEAFSPFGIKDWNSL 299
Q LPG++ + G+ E G+ L + + + +NIE K + +A KD+N L
Sbjct: 247 IQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKA--GLVEKDYNDL 304
Query: 300 FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK 359
FW V PGGPAI+N++E KL L +KL +R L +YGN+ ++ ++L+ +R EE K
Sbjct: 305 FWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR----EELK 360
Query: 360 VTTGEGLEWGVMFGIGAGVTVDTVVLRS 387
E EWG++ G G+T + ++ R+
Sbjct: 361 KKGEEDEEWGLILAFGPGITFEGILARN 388
|
Length = 391 |
| >gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 4e-85
Identities = 100/151 (66%), Positives = 120/151 (79%)
Query: 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNS 298
++VS AQT LP SD + G RE GLT HL K+V ++S+NIEKCL EAF P GI DWNS
Sbjct: 1 ELVSAAQTFLPDSDGAIDGHLREEGLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNS 60
Query: 299 LFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358
+FWI PGGPAI++Q+EAKLGLK +KL A+RHVLSEYGNM V FILDE+R+KS ++G
Sbjct: 61 IFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDEMRKKSLKKG 120
Query: 359 KVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
K TTGEGLEWGV+FG G G+TV+TVVLRS P
Sbjct: 121 KSTTGEGLEWGVLFGFGPGLTVETVVLRSVP 151
|
This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 1e-57
Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 28/375 (7%)
Query: 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTED 75
+A I ++ TA PP Q++ D + + + + + + + +R+ + D
Sbjct: 1 MAVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHA---NAQINRRHLVLPLD 57
Query: 76 ILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV 135
++ + +I + E LG +A +A+ I ++ + G+
Sbjct: 58 WYREPH--------GFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGL 109
Query: 136 DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSL 195
P D ++ LGL+P +RV ++ GC GA + A+D+ P A VLVVC +L
Sbjct: 110 ATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCS 169
Query: 196 GTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV 255
T+ D L G ALFGDGAAA+++ + I+ T+ P S+ +
Sbjct: 170 LTYVFADDTKSN-LVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIM 228
Query: 256 AGQFREMGLTVHLSKNVATVV----SENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIV 311
+ GL V LS+++ ++ + N+ L I+D + W+V PGGP ++
Sbjct: 229 GWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLAT--HGLSIEDIEA--WVVHPGGPKVI 284
Query: 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVM 371
+ E LGL + L + VL EYGNM +V F+L++ +K+ + G G+M
Sbjct: 285 DAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKAPKSG--------SRGLM 336
Query: 372 FGIGAGVTVDTVVLR 386
F +G G + V+L
Sbjct: 337 FAMGPGFCSELVLLD 351
|
Length = 356 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 4e-43
Identities = 70/288 (24%), Positives = 101/288 (35%), Gaps = 44/288 (15%)
Query: 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-MPGADYQLTKMLGLNPSVKRVMLY 160
+LG EAA +AI + G SK I +I + G GA QL LG+ +
Sbjct: 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI-SGGPAYSVN 65
Query: 161 FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAA 220
Q C G TA+ +A +N VL S+ +FGDGAA
Sbjct: 66 -QACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------FVFGDGAA 105
Query: 221 ALIIGANPDTTL-SEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSEN 279
A ++ + P +IVS A T + V V E
Sbjct: 106 AAVVESEEHALRRGAHPQAEIVSTAATFDG-------------------ASMVPAVSGEG 146
Query: 280 IEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLK--QQKLSATRHVLSEYGN 337
+ + +A G+ + + G I + +E LGL + A L G+
Sbjct: 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGH 206
Query: 338 MGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385
G + ILDE+ E T ++ G G G T VVL
Sbjct: 207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 2e-40
Identities = 70/343 (20%), Positives = 104/343 (30%), Gaps = 80/343 (23%)
Query: 102 VPKLGEEAATKAIKEWG----QSKSQITHLIFCSLVGVD--------------------- 136
V LG EAA +AI + G K+ I ++ + G
Sbjct: 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKA 70
Query: 137 -MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSL 195
PGA Q+ LG++ + C A+ +A D +N VL S+
Sbjct: 71 MFPGASGQIATPLGIH--GPAYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELA 127
Query: 196 GTFRGPSDANLGCL------------AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVS 242
DA A +FGDGA AL++ +IV
Sbjct: 128 APMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVG 187
Query: 243 GAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWI 302
A TI G F +E + + EA + G+ W+ + +
Sbjct: 188 TAATIDGAG----MGAFAP--------------SAEGLARAAKEALAVAGLTVWDIDYLV 229
Query: 303 VQPGGPAIVNQIEAKLGLK--QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK- 359
G I + E KL K A + GN+ +V +DE
Sbjct: 230 AHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIP 289
Query: 360 -----------------VTTGEGLEWGVMFGIGAGVTVDTVVL 385
TT L ++ G G G T T+VL
Sbjct: 290 PSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 2e-39
Identities = 85/327 (25%), Positives = 129/327 (39%), Gaps = 36/327 (11%)
Query: 74 EDILKKNPNICAYDGSSLDSRQDILVRE-VPKLGEEAATKAIKEWGQSKSQITHLIFCSL 132
E++ + + + R E VP + EAA +A++ G I LI +
Sbjct: 19 EELAEGLGVDPGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78
Query: 133 VGVD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCS 191
+D A L ++LGL + L Q CY G A+++A + E+ P LVV S
Sbjct: 79 SPIDKGKSAATYLAELLGLTN-AEAFDLK-QACYGGTAALQLAANLVESGPWRYALVVAS 136
Query: 192 DLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGS 251
D D A + GDGAAA+++ NP + IVS T PG
Sbjct: 137 D----IASYLLDEG---SALEPTLGDGAAAMLVSRNPGILAAG-----IVSTHSTSDPGY 184
Query: 252 DSDVAG-----------QFREMGLTVH-LSKNVATVVSENIEKCLDEAFSPFGIKDWNSL 299
D + LT + V + I K + +A G+ +
Sbjct: 185 DFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLSEDIDY 244
Query: 300 FWIVQPGGPAIVNQIEAKLGLKQQKLSATRH-VLSEYGNMGGVSVFFILDEIRRKSAEEG 358
F QP G I+ + KLG +K S TR +L GNM S+ L + E G
Sbjct: 245 FVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLL----ESG 300
Query: 359 KVTTGEGLEWGVMFGIGAGVTVDTVVL 385
K+ G+ + ++F G+G T + VL
Sbjct: 301 KLKAGDRV---LLFSYGSGFTAEAFVL 324
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 41/295 (13%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-MPGADYQLTKMLGLNPSVKRVMLYFQG 163
L EAA KA+++ G S I +I + P + LGL + +
Sbjct: 55 LAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAPAFDLQ--AA 112
Query: 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALI 223
C A+ +A + VLVV ++ +D + LFGDGA A++
Sbjct: 113 CSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD-WTDRDTC-----VLFGDGAGAVV 166
Query: 224 IGANPD-------TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREM-GLTVHLSKNVATV 275
+ A D S+ ++ + G M G V K
Sbjct: 167 LEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVF--KFAVRA 224
Query: 276 VSENIEKCLDEAFSPFGIK----DWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHV 331
+ + IE+ L++A G+ DW F Q I+ I KLG+ ++K+ T
Sbjct: 225 MPKAIEEVLEKA----GLTPEDIDW---FVPHQA-NLRIIEAIAKKLGIPEEKVVVT--- 273
Query: 332 LSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
+ +YGN S+ LDE + EG++ G+ + ++ G G+T ++R
Sbjct: 274 VDKYGNTSAASIPLALDE----ALREGRIKPGDLV---LLEAFGGGLTWGAALVR 321
|
Length = 323 |
| >gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
+ EAA A+K S+I +I S G D P A + + LGLNPS R
Sbjct: 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATI-VAEALGLNPSA-RAADVEF 111
Query: 163 GCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAAL 222
CY G A++ A + E+ + LV+ +D + P D A + G GA A
Sbjct: 112 ACYAGTAALQAAIGWVESGMISYGLVIGADTAQY---APGD------ALEYTAGAGAVAF 162
Query: 223 IIGANPD 229
+IG NP
Sbjct: 163 LIGKNPP 169
|
Length = 377 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-11
Identities = 73/304 (24%), Positives = 114/304 (37%), Gaps = 59/304 (19%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-MPGADYQLTKMLGLNPSVKRVMLYFQG 163
L EAA KA+++ G I +I + P + LG +
Sbjct: 53 LAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNA---------A 103
Query: 164 CY-IGAT------AIRMAKDFAENNPGARVLVVCSD-LSLGTFRGPSDANLGCLAGQALF 215
+ I A + A + VLVV ++ LS +D + + LF
Sbjct: 104 AFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL--DWTDRST-AV----LF 156
Query: 216 GDGAAALIIGANP------DTTL----SEKPLFQIVSGAQTILPGSDSDVAGQFREMGLT 265
GDGA A+++ A D+ L S L I +G G
Sbjct: 157 GDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGRE 216
Query: 266 VHLSKNVATVVSENIEKCLDEAFSPFGIK----DWNSLFWIVQPGGPAIVNQIEAKLGLK 321
V K ++ E+IE+ L++A G+ DW F Q I+ + +LGL
Sbjct: 217 VF--KFAVRLMPESIEEALEKA----GLTPDDIDW---FVPHQ-ANLRIIEAVAKRLGLP 266
Query: 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVD 381
++K+ L YGN S+ LDE EEGK+ G+ + ++ G GAG+T
Sbjct: 267 EEKVV---VNLDRYGNTSAASIPLALDEAI----EEGKLKKGDLV---LLLGFGAGLTWG 316
Query: 382 TVVL 385
+L
Sbjct: 317 AALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 5e-11
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLV-GVDMPGADYQLTKMLGLN--PSVKRVMLYF 161
+G EAA +AI+ G SK I +I + P A + LG+ P+
Sbjct: 54 MGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPA----FDLS 109
Query: 162 QGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAA 221
C A+ +AK + E+ VLVV ++ L + +D C+ LFGDGA A
Sbjct: 110 AACAGFIYALSVAKQYIESGKYKTVLVVGAEK-LSSTLDWTDRG-TCV----LFGDGAGA 163
Query: 222 LIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV----AGQFREMGLTVHLS-------K 270
+++G + D + GA G+ + AG G + ++ K
Sbjct: 164 VVLGESED----PGGIISTHLGAD----GTQGEALYLPAGGRPTSGPSPFITMEGNEVFK 215
Query: 271 NVATVVSENIEKCLDEA-FSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329
+ + + +E+ L+ P I DW ++ I+ + +L L ++ T
Sbjct: 216 HAVRKMGDVVEETLEANGLDPEDI-DW----FVPHQANLRIIEALAKRLELDMSQVVKTV 270
Query: 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
H +YGN S+ LDE+ R G++ G+ L ++ G G+T ++R
Sbjct: 271 H---KYGNTSAASIPLALDELLR----TGRIKPGDLL---LLVAFGGGLTWGAALVR 317
|
FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318 |
| >gnl|CDD|235964 PRK07204, PRK07204, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 36/295 (12%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-MPGADYQLTKMLGLNPSVKRVMLYFQG 163
+G EAA KA+++ + I +I S +P + + LGL S
Sbjct: 55 MGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINST 114
Query: 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALI 223
C TA+ E RVL++ S++S N G LFGDGAAA++
Sbjct: 115 CLSFITALDTISYAIECGRYKRVLIISSEIS------SVGLNWGQNESCILFGDGAAAVV 168
Query: 224 IGANPDT---------TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLS-KNVA 273
I + T S + G T++ + + R+ ++ + +
Sbjct: 169 ITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREY---SEERKEDFLFDMNGRAIF 225
Query: 274 TVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQIEAKLGLKQQKLSATRHV 331
+ S+ + K +D+ G + IV Q GPA+ I KLG+ +++ +
Sbjct: 226 KLSSKYLMKFIDKLLMDAGYT-LADIDLIVPHQASGPAM-RLIRKKLGVDEERFVT---I 280
Query: 332 LSEYGNMGGVSVFFILDE-IRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385
++GNM S+ L E I++K + G ++ G AG+++ ++L
Sbjct: 281 FEDHGNMIAASIPVALFEAIKQKKVQRGNKI--------LLLGTSAGLSIGGILL 327
|
Length = 329 |
| >gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 43/293 (14%)
Query: 127 LIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARV 186
++ CSL + P + L VK L GC GA ++ +A + + NP
Sbjct: 160 IVNCSLFNPN-PSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYA 218
Query: 187 LVVCSD-LSLGTFRGPSDANLGCLAGQALFGDGAAALIIG-ANPDTTLSEKPLFQIVSGA 244
++V ++ ++L +RG +D ++ L LF G AA+++ + D S+ L IV
Sbjct: 219 VIVSTENMTLSMYRG-NDRSM--LVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTH 275
Query: 245 Q---------------------TILPGSDSDVAGQFREMGLT------VHLSKNVATVVS 277
+ L + VAG + LT + LS+ + ++
Sbjct: 276 KGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILF 335
Query: 278 ENIEKCLDEAFSPFGIKDWNSLF--WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEY 335
K SP+ + D+ F + + GG A+++ +E LGL + L +R L +
Sbjct: 336 LVKSKLFRLKVSPY-VPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRF 394
Query: 336 GNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388
GN S+++ L + K +V G+ + W + F G+G +++V R+
Sbjct: 395 GNTSSSSLWYELAYVEAKC----RVKRGDRV-WQLAF--GSGFKCNSIVWRAL 440
|
Length = 466 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 90/392 (22%), Positives = 139/392 (35%), Gaps = 92/392 (23%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
IL+ G++ P + + D + SDH I ++ +KKR H+
Sbjct: 3 VHILSTGSSVPNFSVENQQFEDI---IETSDHW---------ISTRTGIKKR--HLA--- 45
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
SS + KL EAA KA+ + +I +I + D
Sbjct: 46 -----------PSS---------TSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDD 85
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVV----CSD 192
+ G+ QL +G +V + C A+ A F +N +LVV S
Sbjct: 86 LFGSASQLQAEIGATRAVAFDIT--AACSGFILALVTATQFIQNGSYKNILVVGADTLSK 143
Query: 193 LSLGTFRGPSDANLGCLAGQALFGDGAAALIIGA-----------------NPDTTLSEK 235
+ R C+ LFGDGA A IIGA N L K
Sbjct: 144 WIDWSDRKT------CI----LFGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNK 193
Query: 236 PLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKD 295
P+ G + G ++ +E + K V I KCL+ D
Sbjct: 194 PVNNQSFGTTKLPQGQYQSISMNGKE------VYKFAVFQVPAVIIKCLNALNISIDEVD 247
Query: 296 WNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE-IRRKS 354
W +I+ I+ I +L + K+ L +YGN S+ LDE I+
Sbjct: 248 W----FILHQANKRILEAIANRLSVPNSKMITN---LEKYGNTSAASIPLALDEAIQNNK 300
Query: 355 AEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
+ G++ V+ G GAG+T +VL+
Sbjct: 301 IQPGQII--------VLSGFGAGLTWGAIVLK 324
|
Length = 326 |
| >gnl|CDD|213655 TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 110 ATKAIKEWGQSKSQITHLIFCSLVGVDMP--GADYQLTKMLGLNPSVKRVMLYFQGCYIG 167
A K I + K +I +IF + G+D A Y + +LGL P + L Q CY
Sbjct: 56 AAKPILD-RNDKQKIDMVIFGTESGIDQSKAAAVY-VHGLLGLQPFCRSFELK-QACYGA 112
Query: 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGAN 227
A++MAK +P +VLV+ SD++ P G+ G GA A+++ A+
Sbjct: 113 TAALQMAKGHVALSPDRKVLVIASDIAKYGLESP---------GEPTQGAGAVAMLVSAD 163
Query: 228 P 228
P
Sbjct: 164 P 164
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. Length = 379 |
| >gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 1e-05
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 295 DWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354
DW F Q I++ + +LGL +K+ L YGN S+ LDE
Sbjct: 12 DW---FVPHQANLR-IIDAVAKRLGLPPEKVVVN---LDRYGNTSAASIPLALDEAVE-- 62
Query: 355 AEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
EGK+ G+ + ++ G GAG+T VLR
Sbjct: 63 --EGKLKPGDLV---LLVGFGAGLTWGAAVLR 89
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90 |
| >gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 214 LFGDGAAALIIGANPDT---------TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGL 264
LFGDGA A+++ A + T + +G T + G + G
Sbjct: 158 LFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGR 217
Query: 265 TVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQ--IEA---KLG 319
V K + + + L++A G+ + + W++ P N IE+ KLG
Sbjct: 218 EVF--KWAVRTMPKGARQVLEKA----GL-TKDDIDWVI----PHQANLRIIESLCEKLG 266
Query: 320 LKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379
+ +K T + YGN ++ LD E+GK+ G+ L +++G GAG+T
Sbjct: 267 IPMEK---TLVSVEYYGNTSAATIPLALDLAL----EQGKIKPGDTL---LLYGFGAGLT 316
|
Length = 325 |
| >gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 49/284 (17%)
Query: 127 LIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARV 186
++ CSL P + L +K L GC G +I +A D + NP +
Sbjct: 214 IVNCSLFN-PTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYA 272
Query: 187 LVVCSD-LSLGTFRGPSDANLGCLAGQALFG-DGAAALIIGANPDTTLSEKPLFQIVSGA 244
+VV ++ ++L + G + L C +F GAA L+ D S+ L V
Sbjct: 273 VVVSTENITLNWYFGNDRSMLLC---NCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTH 329
Query: 245 QTILPGSDSD-------------------------VAGQFREMGLT------VHLSKNVA 273
+ G+D VAG + +T + LS+
Sbjct: 330 K----GADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFM 385
Query: 274 TVVSENIEKCLDEAFSPFGIKDWNSLF--WIVQPGGPAIVNQIEAKLGLKQQKLSATRHV 331
V+ K L P+ I D+ F + + GG A++++++ L L + +R
Sbjct: 386 FFVTLVRRKLLKAKVKPY-IPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMT 444
Query: 332 LSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIG 375
L +GN S+++ L K G+V+ G+ + W + FG G
Sbjct: 445 LHRFGNTSSSSLWYELAYTEAK----GRVSAGDRV-WQIAFGSG 483
|
Length = 521 |
| >gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 41.6 bits (99), Expect = 4e-04
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 42/188 (22%)
Query: 214 LFGDGAAALIIGANPDTTLSEKPLFQIVS----GAQ---TILPGSDS--DVAGQFREM-G 263
LFGDGA A+++GA SE+P G+ LPG S + + M G
Sbjct: 157 LFGDGAGAVVLGA------SEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEG 210
Query: 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQ--IEA---KL 318
V K +++ + L+ A G+ + W+V P N I+A KL
Sbjct: 211 REVF--KFAVRELAKVAREALEAA----GLTP-EDIDWLV----PHQANLRIIDATAKKL 259
Query: 319 GLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378
GL +K+ T + +YGN S+ LDE + +G++ G+ + ++ G G G+
Sbjct: 260 GLPMEKVVVT---VDKYGNTSAASIPLALDE----AVRDGRIKRGDLV---LLEGFGGGL 309
Query: 379 TVDTVVLR 386
T ++R
Sbjct: 310 TWGAALVR 317
|
Length = 319 |
| >gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 50/306 (16%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGL-NPSVKRVMLYFQG 163
L EAA KA++ G + ++ C+ D+ G+ Q+ LG N + G
Sbjct: 99 LAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNALAFDLTAACSG 158
Query: 164 CYIG-ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAAL 222
+G TA R F VLV+ +D +L + +D C+ LFGDGA A+
Sbjct: 159 FVLGLVTAAR----FIRGGGYKNVLVIGAD-ALSRYVDWTDRGT-CI----LFGDGAGAV 208
Query: 223 IIGANPDTTLS------------EKPLFQIVSGAQTILPGSDSDVAGQFR---------E 261
++ A D K L G G +++ G F +
Sbjct: 209 VLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQ 268
Query: 262 M-GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGL 320
M G V K V + IE L +A DW L Q I++ + +LG+
Sbjct: 269 MNGKEVF--KFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQ----RIIDAVAQRLGI 322
Query: 321 KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTV 380
+K+ + L+ YGN S+ LDE + GKV G+ + G GAG+T
Sbjct: 323 PPEKVISN---LANYGNTSAASIPLALDE----AVRSGKVKKGDVI---ATAGFGAGLTW 372
Query: 381 DTVVLR 386
+ ++R
Sbjct: 373 GSAIVR 378
|
Length = 379 |
| >gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | Back alignment and domain information |
|---|
Score = 36.7 bits (86), Expect = 0.001
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228
A+ A + VLVV ++ L +D + LFGDGA A+++ A
Sbjct: 12 YALSTAAALIRSGRAKNVLVVGAET-LSRILDWTDRSTA-----VLFGDGAGAVVLEATE 65
Query: 229 DT 230
+
Sbjct: 66 EG 67
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 80 |
| >gnl|CDD|171793 PRK12880, PRK12880, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 33/287 (11%)
Query: 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLV-GVDMPGADYQLTKMLGLNPSVKRVMLY 160
V LG+ AA ++ K+ + LI + MP L ++L L+ L
Sbjct: 60 VSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG 119
Query: 161 FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAA 220
Q C + +A ++ G ++L++C D +L F P + NL +FGDG +
Sbjct: 120 -QACAGYLYGLFVAHSLIQSGLG-KILLICGD-TLSKFIHPKNMNLA-----PIFGDGVS 171
Query: 221 ALIIGANPDTTLSEKPLFQIVSGA----QTILPGS-----DSDVAG--------QFREMG 263
A +I F++ S + I+P +D+ +FR++
Sbjct: 172 ATLIEKTDFNE----AFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLE 227
Query: 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQ 323
N+ + E K E + + + F + +V+ I+ +L L
Sbjct: 228 NLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDD 287
Query: 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT-GEGLEWG 369
K+ ++ +Y N+ S+ +L E+ + ++ G GL WG
Sbjct: 288 KVP--NFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWG 332
|
Length = 353 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 100.0 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 100.0 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 100.0 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 100.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 100.0 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 100.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 100.0 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 100.0 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 100.0 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 100.0 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 100.0 | |
| PRK06840 | 339 | hypothetical protein; Validated | 100.0 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 100.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 100.0 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 100.0 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 100.0 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 100.0 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 100.0 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 100.0 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 100.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.95 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.94 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 99.92 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.89 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.85 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.84 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 99.82 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.82 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.73 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.7 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.69 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.67 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.67 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.66 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.62 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.62 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 99.62 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.62 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.6 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.6 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.6 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.6 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.58 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.56 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.56 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.55 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.54 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.54 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.53 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.52 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.52 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.51 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.5 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.5 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.49 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.47 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PRK06158 | 384 | thiolase; Provisional | 99.46 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.45 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.45 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.45 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.44 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.44 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 99.43 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.43 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.42 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.41 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.41 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.4 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.4 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.39 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.39 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.38 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.38 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.38 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.38 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.37 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.37 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.35 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.35 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.33 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.32 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.31 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.31 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.29 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.28 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.27 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.27 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.26 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.21 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.19 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.19 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.15 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.12 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.12 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.1 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.07 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.04 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 98.86 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 98.8 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 98.76 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.75 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 98.65 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 98.64 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 98.62 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 98.1 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.96 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 97.68 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.1 | |
| PF08540 | 282 | HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s | 96.91 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.81 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 96.75 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 96.18 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 95.72 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 95.07 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 94.89 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 93.53 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.99 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 92.29 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 91.73 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.07 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 91.04 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 90.92 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 90.9 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.89 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 89.83 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 89.69 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 89.4 | |
| PRK06840 | 339 | hypothetical protein; Validated | 89.15 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 89.09 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 88.6 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 88.23 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 87.15 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 86.57 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 86.4 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 85.5 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 85.21 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 85.21 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 84.4 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 84.01 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 82.9 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 82.39 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 80.9 |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-62 Score=481.52 Aligned_cols=381 Identities=67% Similarity=1.124 Sum_probs=328.9
Q ss_pred ccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcC
Q 016111 6 DGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICA 85 (395)
Q Consensus 6 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 85 (395)
+-++.....++++|.|+|+.+|++.++|+++.+.+.+..+.++.+.+++++.+|++++||++||+..+++.+...+++.+
T Consensus 6 ~~~~~~~~~~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~ 85 (393)
T PLN03172 6 EIRKAQRAEGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCA 85 (393)
T ss_pred cccccCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccc
Confidence 34455567788999999999999999999999998766544444566666788999999999999987655544555555
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccch
Q 016111 86 YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCY 165 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~ 165 (395)
++.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||+
T Consensus 86 ~~~p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~ 165 (393)
T PLN03172 86 YMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCF 165 (393)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchH
Confidence 67889999999999999999999999999999999999999999999996699999999999999987544688999999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee
Q 016111 166 IGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ 245 (395)
Q Consensus 166 ~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 245 (395)
|++.||++|..++++++.++||||++|.+|..+.++.+.+.++..+..+|||||+|+||++++..+. ..+.+++.+..+
T Consensus 166 g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~-~~~~~~i~~~~~ 244 (393)
T PLN03172 166 AGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQ 244 (393)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcc-cCceeEEeeecc
Confidence 9999999999999999999999999999996566665533445567899999999999998665322 224578888777
Q ss_pred eecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 246 TILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 246 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
.++|.+++.+.|.+...|+.+.+.+++++++.+.+++.++++|+++|++. .|+ +|++||+|+++++.++++||+++++
T Consensus 245 ~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~ 323 (393)
T PLN03172 245 TILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEK 323 (393)
T ss_pred EEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHH
Confidence 78899988888988888887888899999999999999999999999996 888 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+..+|+++++||||+|+++|++|++++++..++|++++|.+.+++++++||+|+||++++|||.
T Consensus 324 ~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 324 LRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred HHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 9998999999999999999999999885322337777774447899999999999999999995
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-62 Score=482.77 Aligned_cols=381 Identities=64% Similarity=1.124 Sum_probs=327.7
Q ss_pred ccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCC
Q 016111 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYD 87 (395)
Q Consensus 8 ~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 87 (395)
++.....++.+|.|+|+.+|++.++++++.+.+.+....++.+..++++.+|++++||++||+..+++.+..++++.+++
T Consensus 12 ~~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 91 (401)
T PLN03170 12 RKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYM 91 (401)
T ss_pred ccCCCCCCCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccC
Confidence 44455667899999999999999999999999877654434455666788899999999999998765544455555667
Q ss_pred CCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhH
Q 016111 88 GSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIG 167 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~ 167 (395)
.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||+|+
T Consensus 92 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~ 171 (401)
T PLN03170 92 APSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAG 171 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHH
Confidence 88999999999999999999999999999999999999999999999779999999999999998865589999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
+.||++|..++++++.++||||++|.+|..+.+|.+.+++++.+..+|||||+|+||++++..++ ..+.+++.+..+.+
T Consensus 172 ~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~-~~~~~~l~~~~~~~ 250 (401)
T PLN03170 172 GTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTI 250 (401)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccc-cCCceEEeeccceE
Confidence 99999999999999999999999999998665565433456667889999999999998765322 12346777776667
Q ss_pred cCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+|.+++.+.|.+.+.|+.+.+++++++.+.+.++++++++|+++|++. +|+ +|++||+|+++++.+.++||++++++.
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~ 329 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMR 329 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHH
Confidence 887777777888888887888999999999999999999999999997 888 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
.+|+++++||||+|+++|++|++++++..++|++++|++.|++++++||+|++|++++|||.+.
T Consensus 330 ~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred HHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheeccc
Confidence 8889999999999999999999998532223778887444789999999999999999999554
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-64 Score=471.87 Aligned_cols=314 Identities=23% Similarity=0.331 Sum_probs=272.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.|+|.|+|+++++|+++... +.+++ +||.+++||++||++.++|.
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~---~~tsd---------ewI~~rtGir~R~~a~~~e~------------------ 51 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKR---VDTSD---------EWIETRTGIRERRIAADDET------------------ 51 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhc---cCCCc---------ceeeeecCCceeeecCCCcc------------------
Confidence 4688999999999999999999855 45555 89999999999999988773
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
.++|+++|+++||+++|++|+|||+||++|+|| +.+|++|+.||++||+.... +||++.+|+||++||.+
T Consensus 52 -------~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~ 122 (323)
T COG0332 52 -------TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSV 122 (323)
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHH
Confidence 899999999999999999999999999999999 78999999999999999864 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC-CCCCCCCCceEEEeeeee----ec
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP-DTTLSEKPLFQIVSGAQT----IL 248 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~-~~~~~~~~~~~~~~~~~~----~~ 248 (395)
|.++|++|.+++||||++|++|. +.|+ .++.+..+|||||+|+||++.+ +.++ ..+.+.+++.. ..
T Consensus 123 A~~~i~sG~~k~vLVVg~e~~S~-~ld~-----~dR~t~vlFgDGAgAvvl~~~~~~~~i---~~~~l~sdg~~~~~l~~ 193 (323)
T COG0332 123 ADGLIRSGGYKNVLVVGAETLSR-ILDW-----TDRDTCVLFGDGAGAVVLEATEDDNGI---LDTDLGSDGSQGDLLYL 193 (323)
T ss_pred HHHHHHcCCCCEEEEEehhHhhc-cCCH-----hhccceEEEcCCceEEEEecCCCCcCe---eeeeeeccccCCCeeec
Confidence 99999999999999999999997 4554 4556899999999999999987 4443 23444444322 11
Q ss_pred CCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 249 PGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+.+.... .........+.| |+++|+++++.++++++++|+++|+++ +|| +|+|||+|.++++.++++||+|++|+.
T Consensus 194 ~~~~~~~-~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~ 271 (323)
T COG0332 194 PGGGSAT-PKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVV 271 (323)
T ss_pred cCCCCcc-ccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHh
Confidence 2221111 000011124566 999999999999999999999999998 999 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
. ++++|||+++||+|++|++++++ |++++| |+++|++||+|++||++++||.
T Consensus 272 ~---~~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 272 V---TVDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred h---HHHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence 8 59999999999999999999998 999999 9999999999999999999984
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-62 Score=477.07 Aligned_cols=385 Identities=65% Similarity=1.093 Sum_probs=329.2
Q ss_pred cccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCc
Q 016111 5 KDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNIC 84 (395)
Q Consensus 5 ~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 84 (395)
-+.++...+.++++|.++|+.+|++.++++++.+.+.+...+++.+..++++.+|++++||++||+..+++.+...+.+.
T Consensus 5 ~~~~~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~ 84 (391)
T PLN03173 5 DEIRKAQRAEGPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVC 84 (391)
T ss_pred cccccCCCCCCCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccc
Confidence 34555567778899999999999999999999999876653333455666678899999999999998766444456666
Q ss_pred CCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccc
Q 016111 85 AYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGC 164 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C 164 (395)
+++.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||
T Consensus 85 ~~~~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC 164 (391)
T PLN03173 85 EYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGC 164 (391)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCcc
Confidence 66778999999999999999999999999999999999999999999999668999999999999998764578999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeee
Q 016111 165 YIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGA 244 (395)
Q Consensus 165 ~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~ 244 (395)
+|++.||++|..++++++.++||||++|.+|..|+++.+.++++..+..+|||||+|+||+.++..++ ..+.+++.+..
T Consensus 165 ~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~-~~~~~~l~~~~ 243 (391)
T PLN03173 165 FAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFELVSAA 243 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCc-CCcceEEEeee
Confidence 99999999999999999999999999999996566665533444567899999999999998654332 22357888777
Q ss_pred eeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016111 245 QTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ 323 (395)
Q Consensus 245 ~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e 323 (395)
+.++|.+++.+.|.+...|+.+.+.+++++.+.+.++++++++|+++|++. +|+ +|++||+|+++++.++++||++++
T Consensus 244 ~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~e 322 (391)
T PLN03173 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPE 322 (391)
T ss_pred eEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChH
Confidence 778899988888888888877778899999999999999999999999997 888 999999999999999999999999
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
|+..+|.++++||||+|+|+|++|++++++..+.+.+++|.+.+++++++||+|+|+++++|+|. .|+
T Consensus 323 kl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~-~~~ 390 (391)
T PLN03173 323 KLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV-APT 390 (391)
T ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhc-cCC
Confidence 99998999999999999999999999996422224444443337899999999999999999994 365
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-61 Score=476.43 Aligned_cols=378 Identities=51% Similarity=0.879 Sum_probs=320.0
Q ss_pred cccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCC
Q 016111 9 NQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDG 88 (395)
Q Consensus 9 ~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 88 (395)
+.+...++++|.++|+.+|++.++++++.+.+.+...+++.+..++++.+|++++||++||+..+++.+...+++.++..
T Consensus 8 ~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 8 GQPRAEGPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCCCCCCCeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccC
Confidence 34566788999999999999999999999998776543344556667888999999999999987665555666666678
Q ss_pred CChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHH
Q 016111 89 SSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~ 168 (395)
|++++|+++|.+...+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++++||+|++
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~ 167 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGA 167 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHH
Confidence 99999999999999999999999999999999999999999999997789999999999999987656899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeec
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL 248 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
.||++|+.++++++.++||||++|.+|..+.++.+.+.+++.+..+|||||+|+||++++.... ....+++....+.++
T Consensus 168 ~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~-~~~~~~~~~~~~~~~ 246 (389)
T PLN03168 168 SVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETIL 246 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCcc-CCcceEEEeeeeEEE
Confidence 9999999999999999999999999998665443322445567899999999999998654321 123467766666678
Q ss_pred CCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 249 PGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
|.+.+.+.|.+.+.|+.+.+.+++++.+.+.++++++++|+..|+.. .|+ +|++||+|++|++.++++||++++|+..
T Consensus 247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 98877778888888877777789999999999999999999999876 555 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+|+++++||||+|+|+|+.|++++++..+.|....|.+.|++++++||+|++|++++|||.
T Consensus 326 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~ 386 (389)
T PLN03168 326 SRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAA 386 (389)
T ss_pred HHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheec
Confidence 8999999999999999999999876422222100011238999999999999999999994
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-60 Score=467.35 Aligned_cols=365 Identities=40% Similarity=0.731 Sum_probs=307.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.|+|+++|+++++|+++.+.+....... .+.++++.++|++++||++||++.+++.+...+.+.....|++++|
T Consensus 20 ~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CCeEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 368999999999999999999998654422111 2445666788999999999999975443334455555567899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.|.+.+.+|+++|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++.+.+++++++||+|+++||.+|
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A 178 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVA 178 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999778899999999999999887544799999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
.+++++++.++||||++|.++..+..+....+.++.+..+|||||+|+||++++.... ....+++...+...+|.+.+.
T Consensus 179 ~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~~l~~~~~~~ip~~~~~ 257 (391)
T PLN03169 179 KDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVS-ESPFFELHTAIQQFLPGTEKT 257 (391)
T ss_pred HHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCccc-CCcceEEEeeeeeEcCCCccc
Confidence 9999999999999999999887554332222446677899999999999998664210 112466666666677877666
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCC--CCceEEEEcCCChHHHHHHHHHcCCCccchhHHHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKD--WNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVL 332 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~--~~di~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~ 332 (395)
+.|.+.++|+.+.+++++++++.+.++++++++|+++|++. +++++|++||+|++|++.++++||+|++|+..+|.++
T Consensus 258 ~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l 337 (391)
T PLN03169 258 IDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRAL 337 (391)
T ss_pred cCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 66777777877778999999999999999999999999984 1344789999999999999999999999999888899
Q ss_pred HhcCCCccchHHHHHHHHHHhhhhcCCcc---CCCCCceEEEEEEccchhhhheeeeec
Q 016111 333 SEYGNMGGVSVFFILDEIRRKSAEEGKVT---TGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~~~~~g~i~---~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++||||+|+|+|++|++++++ ++++ +| |++++++||+|++|++++|||.
T Consensus 338 ~~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 338 MDYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred HHhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhhh
Confidence 999999999999999999876 6665 57 9999999999999999999984
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-58 Score=456.29 Aligned_cols=373 Identities=50% Similarity=0.876 Sum_probs=303.0
Q ss_pred CCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCCh
Q 016111 12 QGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSL 91 (395)
Q Consensus 12 ~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
.++++++|.|+|+|+|+++++|+++.+.+.+....+..++.+++++||++++||++||++.+++.+...+.+.....|++
T Consensus 18 ~~~~~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~ 97 (399)
T PLN03171 18 RADGLAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSL 97 (399)
T ss_pred CCCCCcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCH
Confidence 45577999999999999999999999886433222322445666789999999999999987643334455555567899
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHH
Q 016111 92 DSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 92 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL 171 (395)
++|+++|.+.+.+|+++|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++.+||+|++.||
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL 177 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAAL 177 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999995589999999999999976533567778999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeeccccccCCCCCCC-chhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCC
Q 016111 172 RMAKDFAENNPGARVLVVCSDLSLGTFRGPSDAN-LGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPG 250 (395)
Q Consensus 172 ~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~-~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (395)
++|.+++++++.++||||++|.+|..+ ++.+.+ +.+.....+|||||+|+||++.+... ....+++........|.
T Consensus 178 ~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~--~~~~~~l~~~~~~~~p~ 254 (399)
T PLN03171 178 RLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIPE 254 (399)
T ss_pred HHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCC--CCCceEEEEeeeEEecC
Confidence 999999999999999999999999754 333322 23334468999999999999866421 01246776665566787
Q ss_pred CcCccceEEecCceEEEeC-chhHHHHHHHHHHHHHHhhcc-----CCCCCCCceEEEEcCCChHHHHHHHHHcCCCccc
Q 016111 251 SDSDVAGQFREMGLTVHLS-KNVATVVSENIEKCLDEAFSP-----FGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
+.+.+.|.....|+.+.+. +.+++.+.+.+.++++++|++ .|++. +|+.|++||+|.+|++.+.++||++++|
T Consensus 255 ~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl~~ek 333 (399)
T PLN03171 255 SDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGLEPEK 333 (399)
T ss_pred CchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCCCHHH
Confidence 7666777666666666664 778877777677777666553 57776 8886668999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCC--ccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK--VTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
+..+|.++++||||+|+|+|++|++++++ ++ +++|.+.|++++++||+|++|++++|+|.+.|.
T Consensus 334 ~~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~~~~ 399 (399)
T PLN03171 334 LAASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGHPA 399 (399)
T ss_pred hHHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhcccCCC
Confidence 99888899999999999999999999876 42 456532379999999999999999999998874
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-55 Score=429.17 Aligned_cols=355 Identities=40% Similarity=0.661 Sum_probs=294.0
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeec--chhhhcCCCCcCCCCCChhH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVT--EDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~--~~~~~~~~~~~~~~~~~~~~ 93 (395)
.++|.|+|+|+|+++++|+++.+.+.........+..+++.+||.+++||++||++.+ ++.. .......+..++
T Consensus 1 ~~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~----~~~~~~~~~~~~ 76 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETY----APRPEMSPSLDE 76 (361)
T ss_pred CcEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhc----CCccccCCCcCc
Confidence 3689999999999999999999987432211111334556789999999999999987 3310 000113467889
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~~aL~ 172 (395)
++..+.+.+.+|+.+|+++||+++|+++++||+||++|++++..|+++.+|+++||+++.. ++++++ ++|+|++.||+
T Consensus 77 ~~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~-~~~dv~~~~C~~~~~al~ 155 (361)
T cd00831 77 RNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDV-KRYNLGGMGCSAGAIALD 155 (361)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCccc-chhccccccchhHHHHHH
Confidence 9999999999999999999999999999999999999999888999999999999998643 389998 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCc
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSD 252 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (395)
+|.+++++++.++||||++|.+|..+ ++.+ ++....+.++|||||+|+||++++.........+++.+.....+|.+.
T Consensus 156 ~A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (361)
T cd00831 156 LAKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSE 233 (361)
T ss_pred HHHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCC
Confidence 99999999999999999999999744 3433 133334678999999999999876532001123555554445567665
Q ss_pred CccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccC--CCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHH
Q 016111 253 SDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF--GIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~ 329 (395)
+.+.|.+...++.+.+++++++.+.+.++++++++|+++ |++. +|| +|++||+|.++++.+++.||++++|+..+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~ 312 (361)
T cd00831 234 DAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASR 312 (361)
T ss_pred CceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHH
Confidence 555566555666777788999999999999999999999 9997 999 999999999999999999999999998777
Q ss_pred HHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 330 ~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
.++++||||+++|+|++|++++++ |++++| |+|++++||+|++|+++++
T Consensus 313 ~~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 313 MVLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 799999999999999999999998 889999 9999999999999999885
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-53 Score=412.40 Aligned_cols=318 Identities=19% Similarity=0.270 Sum_probs=258.3
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.|+|+|+|+++++|+++.+.. ...+ ....+++.+.+||++||++.+++
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~---~~~~-----~~~~~~i~~~~Gi~~R~~~~~~e------------------ 58 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESV---FSND-----IKTLKRMKKVIGLNTRYICDENT------------------ 58 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHh---cCcc-----hhhhhhhhhccCceEEEeCCCCC------------------
Confidence 456899999999999999999764442 1111 01236688889999999997766
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
.+.+|+++|+++||+++|++++|||+||++|++| +..|+++.+|+++||+++.+ .++|++.+|+|++.||+
T Consensus 59 -------~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~-~~~di~~~C~g~~~aL~ 130 (353)
T PRK12880 59 -------CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKT-IAFDLGQACAGYLYGLF 130 (353)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc-eEEehhhhhHHHHHHHH
Confidence 3899999999999999999999999999999998 89999999999999998654 38999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eec
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~ 248 (395)
+|.+++++|+.+ +|||++|.+|.. .+|.+ +....+|||||+|+||++++... ..+++.+.+. ..+
T Consensus 131 ~A~~~i~~~~~~-~LVv~~e~~S~~-~~~~d-----~~~~~lFGDGAaA~vl~~~~~~~----~~~~~~~~~~~~~~~~~ 199 (353)
T PRK12880 131 VAHSLIQSGLGK-ILLICGDTLSKF-IHPKN-----MNLAPIFGDGVSATLIEKTDFNE----AFFELGSDGKYFDKLII 199 (353)
T ss_pred HHHHHHHcCCCC-EEEEEehhhhcc-CCccc-----CCceeeecccceEEEEEecCCCC----ceEEEEecCCCCCeEEe
Confidence 999999999888 999999999974 45543 23478999999999999755421 1244444332 234
Q ss_pred CCCcCc-cceEEe-------c----CceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH
Q 016111 249 PGSDSD-VAGQFR-------E----MGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI 314 (395)
Q Consensus 249 p~~~~~-~~~~~~-------~----~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i 314 (395)
|.+... ..+... . ....+.+ |+.+++++.+.++++++++|+++|++. +|+ +|++||+|.++++.+
T Consensus 200 p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i 278 (353)
T PRK12880 200 PKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCI 278 (353)
T ss_pred cCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHH
Confidence 443221 111110 0 0113455 899999999999999999999999997 999 999999999999999
Q ss_pred HHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 315 ~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
+++||+|++|++.. ++++|||+++||+|++|++.++. ++ -+++|++||+|++||+++|||.++
T Consensus 279 ~~~Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~ 341 (353)
T PRK12880 279 KEELKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDL 341 (353)
T ss_pred HHHhCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCc
Confidence 99999999998642 58999999999999999999875 43 469999999999999999999654
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-53 Score=407.85 Aligned_cols=312 Identities=19% Similarity=0.243 Sum_probs=257.8
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e-------------------- 50 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDE-------------------- 50 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCC--------------------
Confidence 57899999999999999999988752 22 26789999999999997766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+++|+++||+++|+++++||+||++|++| +..|+.+.+|+++||+++.. +++++++|+|++.||++|
T Consensus 51 -----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A 123 (326)
T PRK05963 51 -----TLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLA 123 (326)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHH
Confidence 3899999999999999999999999999999999 78999999999999998764 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC--CCCCCCceEEEeeee----eec
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT--TLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~--~~~~~~~~~~~~~~~----~~~ 248 (395)
.++++++ .+++|||++|.++.. .++. ++.+.++|||||+|+||++++.. ++ ....+.+.+. ..+
T Consensus 124 ~~~l~~~-~~~aLVv~~d~~s~~-~~~~-----~~~~~~lfGDgA~A~ll~~~~~~~~~~---l~~~~~t~~~~~~~~~~ 193 (326)
T PRK05963 124 DGFVRAQ-GKPVLVVAANILSRR-INMA-----ERASAVLFADAAGAVVLAPSAKANSGV---LGSQLISDGSHYDLIKI 193 (326)
T ss_pred HHHHHcC-CCeEEEEEechhhcc-CCcc-----ccCceEEEeecceEEEEEecCCCCCce---EEEEEEEcCCCCCeEEe
Confidence 9999997 599999999998863 3443 23357899999999999987643 21 0122222211 112
Q ss_pred CCCcCccce--EEecCceEEE--eCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016111 249 PGSDSDVAG--QFREMGLTVH--LSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ 323 (395)
Q Consensus 249 p~~~~~~~~--~~~~~g~~~~--~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e 323 (395)
|.+.....+ ........+. .++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.++||+|++
T Consensus 194 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~ 272 (326)
T PRK05963 194 PAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRA 272 (326)
T ss_pred CCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHH
Confidence 222111000 0011111233 2688898889999999999999999997 999 999999999999999999999999
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
|+.. ++++|||+++||+|++|++++++ +++++| |+|+++++|+|++|++++|||
T Consensus 273 k~~~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 273 KAAS---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred Hhhh---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 9875 59999999999999999999987 889999 999999999999999999997
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=372.75 Aligned_cols=350 Identities=27% Similarity=0.490 Sum_probs=308.4
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHH-hcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICE-KSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
..|.|+++++|++.++|.|+.+.+..+...+ + .+.+.+.+. +.+|++|++..|.+. ....+++.++|
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~---~-~~~I~r~l~~~~~i~~R~~v~Pl~~--------y~e~~~f~ekN 69 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQE---G-REDIPRVLHANAQINRRHLVLPLDW--------YREPHGFGEKN 69 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhcccc---c-hHHHHHHHhhccccccceecccHhh--------ccCCCChhhhh
Confidence 4799999999999999999988876543222 2 333455554 778999999998763 12246789999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.|.|.+..|+++|.++||+.+++.|+|||+|+++|+|+...|++..+|..+||+++.+.|.-....||++++.+|..|+
T Consensus 70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~ 149 (356)
T COG3424 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR 149 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCc
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
.++++.|..+|||||.|.||.+|. +.++...+.+...+||||++|+|++.+... +. ......+....++++|.+++.
T Consensus 150 ~y~ra~P~~~vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~-~~~~p~i~~s~StL~~dse~~ 227 (356)
T COG3424 150 DYCRAAPDANVLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGK-RPLRPDILDSFSTLYPDSEDI 227 (356)
T ss_pred HHHhhCccceEEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEecccccccc-CCCCceecccccccCCccccc
Confidence 999999999999999999997765 333334577888999999999999986542 21 122456677777889999999
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLS 333 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~ 333 (395)
+.|.+.++|+...++++++..+-.++...+..+|+.++++. +|| .|+.|++++++++++.+.||+++++...+|+.++
T Consensus 228 Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~ 306 (356)
T COG3424 228 MGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLR 306 (356)
T ss_pred cceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997 999 9999999999999999999999999999999999
Q ss_pred hcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 334 EYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 334 ~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+|||++|+++++.|.+.+++ . .++| +++++.++|+||+...++++|.+
T Consensus 307 ~~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 307 EYGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HhCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999997 3 6788 89999999999999999999986
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-52 Score=401.30 Aligned_cols=316 Identities=21% Similarity=0.242 Sum_probs=258.9
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.++|+|+|+++++|+++.+.++ .. .+|+.+++||++||++. ++
T Consensus 2 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~------------------ 50 (329)
T PRK07204 2 KRYISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GE------------------ 50 (329)
T ss_pred CCCcEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CC------------------
Confidence 4568999999999999999999988742 12 26788999999999997 44
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
+..+|+.+|++++|+++|++++|||+||++++++ +..|+.+.+|+++||+++...++++++.+|+|++.||.
T Consensus 51 -------~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~ 123 (329)
T PRK07204 51 -------TSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALD 123 (329)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHH
Confidence 2899999999999999999999999999999998 67899999999999998631138999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----ee
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TI 247 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~ 247 (395)
+|.+++++|..++||||++|.++..+ ++. +..+.++|||||+|+||++++.. ++ ....+.+.+. ..
T Consensus 124 ~a~~~l~~g~~~~~Lvv~~e~~s~~~-~~~-----~~~~~~lfGDGAaA~ll~~~~~~~~i---l~~~~~t~~~~~~~~~ 194 (329)
T PRK07204 124 TISYAIECGRYKRVLIISSEISSVGL-NWG-----QNESCILFGDGAAAVVITKGDHSSRI---LASHMETYSSGAHLSE 194 (329)
T ss_pred HHHHHHHCCCCCEEEEEEeccccCCC-Ccc-----cCcceEEEecccEEEEEEEcCCCCcE---EEEEEEEecCCCCceE
Confidence 99999999999999999999988633 332 22246899999999999987653 21 0111211110 01
Q ss_pred cCCCcCc----cceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016111 248 LPGSDSD----VAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLK 321 (395)
Q Consensus 248 ~p~~~~~----~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~ 321 (395)
+|..... ..+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~ 273 (329)
T PRK07204 195 IRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVD 273 (329)
T ss_pred EecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCC
Confidence 1111100 00111122334555 789999999999999999999999997 999 9999999999999999999999
Q ss_pred ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 322 ~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++.. ++++||||+++|+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 274 ~e~~~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 274 EERFVT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHHhhh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 999775 69999999999999999999998 889999 999999999999999999986
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-52 Score=407.97 Aligned_cols=315 Identities=23% Similarity=0.331 Sum_probs=259.0
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.|+|+|+|+++++|+++.+.++ .. .+|+.+++||++||++.+++.
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~~----------------- 95 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDET----------------- 95 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCCC-----------------
Confidence 3578999999999999999999988752 11 267899999999999977663
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
..+|+.+|+++||+++|++++|||+||++++++...++.+..|+++||+++.. +++++++|+|++.||.+
T Consensus 96 --------~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~aL~~ 165 (379)
T PLN02326 96 --------LTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLGLVT 165 (379)
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHHHHH
Confidence 89999999999999999999999999999998844456789999999998654 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC--CCCCCCceEEEeeee--ee--
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT--TLSEKPLFQIVSGAQ--TI-- 247 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~--~~~~~~~~~~~~~~~--~~-- 247 (395)
|.++|++|..++||||++|.++. +.++. ++....+|||||+|+||++++.. ++ ..+.+.+.+. ..
T Consensus 166 A~~~l~~g~~~~vLVv~~e~~s~-~~~~~-----d~~~~~lfGDGAaAvlL~~~~~~~~~i---~~~~~~t~g~~~~~~~ 236 (379)
T PLN02326 166 AARFIRGGGYKNVLVIGADALSR-YVDWT-----DRGTCILFGDGAGAVVLQACDDDEDGL---LGFDMHSDGNGHKHLH 236 (379)
T ss_pred HHHHHHcCCCCEEEEEEechhcC-CCCcc-----ccCceEEEcceeEEEEEEEcCCCCCce---EEEEEEEcCCCCCeEE
Confidence 99999999999999999999986 44443 22346799999999999987642 21 1233333221 00
Q ss_pred c--CCCc---------CccceEEecCce-EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH
Q 016111 248 L--PGSD---------SDVAGQFREMGL-TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 248 ~--p~~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
. +... ....+.....++ .+.+ |+++++++.+.++++++++|+++|++. +|| +|++||+|.++++.
T Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~ 315 (379)
T PLN02326 237 ATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIIDA 315 (379)
T ss_pred ecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHH
Confidence 1 1110 000011111122 2455 789999999999999999999999997 999 99999999999999
Q ss_pred HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 314 IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 314 i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||++++|+.. ++++||||++||+|++|++++++ |++++| |+||+++||+|++|++++++|
T Consensus 316 ~~~~Lgl~~ek~~~---~l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 316 VAQRLGIPPEKVIS---NLANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHcCCCHHHeee---cHhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 99999999999876 48999999999999999999998 889999 999999999999999999997
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-51 Score=396.45 Aligned_cols=314 Identities=24% Similarity=0.322 Sum_probs=256.3
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.|+|+|+|+++++|+|+++.++ .. ..+|.+++||++||++.+++
T Consensus 2 ~v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~-------------------- 49 (326)
T CHL00203 2 GVHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSST-------------------- 49 (326)
T ss_pred ccEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCC--------------------
Confidence 57899999999999999999998752 22 15788999999999987766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+..+|+.+|++++|+++|+++++||.||++++++...+..+..++++||+.+.+ +++++++|+|++.||.+|.
T Consensus 50 -----~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~ 122 (326)
T CHL00203 50 -----SLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTAT 122 (326)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHH
Confidence 389999999999999999999999999999988843345678999999998764 7999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecCCC
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILPGS 251 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 251 (395)
++|++|..+++|||++|.+|.. .++.+ +...++|||||+|+||++.+..++ ..+.+.+.+. ..++..
T Consensus 123 ~~i~sg~~~~~Lvv~~e~~s~~-~~~~~-----~~~~~~fgDga~A~ll~~~~~~~~---~~~~~~t~g~~~~~~~~~~~ 193 (326)
T CHL00203 123 QFIQNGSYKNILVVGADTLSKW-IDWSD-----RKTCILFGDGAGAAIIGASYENSI---LGFKLCTDGKLNSHLQLMNK 193 (326)
T ss_pred HHHHcCCCCEEEEEEehhhhCc-CCccc-----CCceEEEcceeeEEEEEEcCCCCe---EEEEEEEcCCCcceEEecCC
Confidence 9999999999999999999973 34442 234689999999999998665332 1222222221 011110
Q ss_pred c--C-ccceEEecCc--eEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 252 D--S-DVAGQFREMG--LTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 252 ~--~-~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
. . .......+++ ..+.+ ++++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k 272 (326)
T CHL00203 194 PVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSK 272 (326)
T ss_pred CCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHH
Confidence 0 0 0000000111 12344 788888888889999999999999997 999 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+.. ++++|||++||++|++|+++++. |++++| |+|+++++|+|++|+++++||.
T Consensus 273 ~~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 273 MIT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hhh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 975 69999999999999999999998 889999 9999999999999999999995
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-50 Score=390.45 Aligned_cols=315 Identities=19% Similarity=0.274 Sum_probs=258.6
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++++|+.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~------------------- 51 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEE------------------- 51 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCC-------------------
Confidence 468999999999999999999988642 11 26788999999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|++++|+++|+++++||+||++++++ +..|+.+.+|++.||+++.+ +++++++|+|++.||.+
T Consensus 52 ------~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~ 123 (325)
T PRK12879 52 ------YTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLET 123 (325)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHH
Confidence 3899999999999999999999999999999987 78899999999999998754 79999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eec
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~ 248 (395)
|.++|++|..++||||++|.++. +.++.+ +...++|||||+|+||++++.. ++ ....+.+.+. ...
T Consensus 124 A~~~l~~g~~~~~Lvv~~e~~s~-~~~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~ 194 (325)
T PRK12879 124 ANGLITSGLYKKVLVIGAERLSK-VTDYTD-----RTTCILFGDGAGAVVLEATENEPGF---IDYVLGTDGDGGDILYR 194 (325)
T ss_pred HHHHHHcCCCCEEEEEEehhhcC-cCCccc-----cCceEEEeecceEEEEEecCCCCCe---EEEEEEEcCCCCCeEEE
Confidence 99999999999999999999886 333322 2346899999999999997753 21 0111111110 011
Q ss_pred CCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 249 PGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+.............+..+.+ ++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|.+|+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~ 273 (325)
T PRK12879 195 TGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTL 273 (325)
T ss_pred cCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhh
Confidence 11111010000111223444 688999888999999999999999997 999 999999999999999999999999987
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
. ++++|||++++|+|++|++++++ |++++| |+++++++|+|++|+++++||+
T Consensus 274 ~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 274 V---SVEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred h---hHhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence 6 58999999999999999999987 889999 9999999999999999999994
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-50 Score=389.81 Aligned_cols=322 Identities=16% Similarity=0.171 Sum_probs=257.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.|+|+|+|+++++|+++.+.+.+...... ...+++.+.+||++||+..+++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~-----~~~~~i~~~~Gi~~R~~~~~~~------------------- 59 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLR-----LPPGQLEALTGIRERRWWPEGT------------------- 59 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccC-----CChhHhhhhcCceeEecCCCCC-------------------
Confidence 4689999999999999999999987543211000 0125678889999999986654
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
++.+|+.+|++++|+++|+++++||+||++|+++ +..|+++.+|+++||+++.. ++++++++|+|++.||++
T Consensus 60 ------~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~-~~~~v~~~C~~~~~al~~ 132 (338)
T PRK09258 60 ------QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSC-ANFDVSNACLGFLNGMLD 132 (338)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCC-ceeehhhhhHHHHHHHHH
Confidence 3899999999999999999999999999999987 78899999999999998643 379999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCC------CCC----chhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEee
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPS------DAN----LGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~------~~~----~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 243 (395)
|.++|++|..++||||++|.++..+ ++. +.. ........+|||||+|+||++.+.... ..++...
T Consensus 133 A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~----~~~~~~~ 207 (338)
T PRK09258 133 AANMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR----GHRLLGG 207 (338)
T ss_pred HHHHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC----cceeeee
Confidence 9999999999999999999988632 221 100 111123578999999999998654210 1233222
Q ss_pred eeeecCCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016111 244 AQTILPGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLK 321 (395)
Q Consensus 244 ~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~ 321 (395)
.....+...+...|. ...+.+ ++.+++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~ 282 (338)
T PRK09258 208 VTRAATEHHELCQGG----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGID 282 (338)
T ss_pred eeecCCCcccccccC----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCC
Confidence 211122221111111 112333 677888888888899999999999997 999 9999999999999999999999
Q ss_pred ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 322 ~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++|++. ++++||||+++|+|++|++++++ |++++| |+|+++++|+|++|+++++||
T Consensus 283 ~~k~~~---~~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 283 PEKVFT---TFPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHHcee---hHhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 999987 48999999999999999999988 889999 999999999999999999997
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=377.83 Aligned_cols=311 Identities=21% Similarity=0.301 Sum_probs=254.9
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++++++.+.++ .. .+++.+++||++||++.+++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~---~~---------~~~~~~~~Gi~~r~~~~~~~-------------------- 48 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLD---TS---------DEWIRTRTGIRERRIADPGE-------------------- 48 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcC---CC---------HHHhhhccCceEEeeCCCCC--------------------
Confidence 57899999999999999999998752 11 26788899999999997765
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+.+|++++|+++|+++++||.||++++++ +..|+.+.+|+++||+++.+ +++++++|++++.||.+|
T Consensus 49 -----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A 121 (320)
T cd00830 49 -----TTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTA 121 (320)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHH
Confidence 3899999999999999999999999999999988 67899999999999998553 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eecC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~p 249 (395)
..+|++|+.+++|||++|.++..+ ++. ++...++|||||+|+||++++.. ++ ......+... ..++
T Consensus 122 ~~~i~~g~~~~vLvv~~e~~s~~~-~~~-----~~~~~~~~GDgAaA~ll~~~~~~~~i---~~~~~~~~~~~~~~~~~~ 192 (320)
T cd00830 122 AGLIRSGGAKNVLVVGAETLSRIL-DWT-----DRSTAVLFGDGAGAVVLEATEEDPGI---LDSVLGSDGSGADLLTIP 192 (320)
T ss_pred HHHHHcCCCCEEEEEEehhhcccc-Ccc-----cCCceEEEeccceEEEEEecCCCCcE---EEEEEEEcCCCCCeEEeC
Confidence 999999999999999999988633 332 22357899999999999987652 21 0112211110 1112
Q ss_pred CCcCccceEE-ecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 250 GSDSDVAGQF-REMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 250 ~~~~~~~~~~-~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
.......+.. ...+..+.+ ++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~ 271 (320)
T cd00830 193 AGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPEEKVV 271 (320)
T ss_pred CCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhh
Confidence 1111000000 111223444 888998888999999999999999997 999 999999999999999999999999987
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
. ++++|||++++|+|++|++++++ +++++| |+++++++|+|++|+++++
T Consensus 272 ~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 272 V---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred h---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence 5 69999999999999999999998 889999 9999999999999999875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-48 Score=375.96 Aligned_cols=317 Identities=17% Similarity=0.186 Sum_probs=247.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~------------------- 51 (339)
T PRK06840 3 MNVGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPED------------------- 51 (339)
T ss_pred CceEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCC-------------------
Confidence 689999999999999999999988752 12 26677899999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecC-C-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLV-G-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t-~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
+..+|+.+|++++|+++|+++++||+||+++++ + +..|+.+.+|+++||+++.. +++++++|++++.||.
T Consensus 52 ------~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~ 123 (339)
T PRK06840 52 ------HTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALK 123 (339)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHH
Confidence 389999999999999999999999999987654 4 67899999999999998654 7899999999999999
Q ss_pred HHHHHHHc-CCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----e
Q 016111 173 MAKDFAEN-NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----T 246 (395)
Q Consensus 173 ~A~~ll~~-g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~ 246 (395)
+|.++|++ |..+++|||++|..+. +.++.+. ... ..++|||||+|+||++++.. ++ ....+.+.+. .
T Consensus 124 ~A~~~l~~~g~~~~~Lvv~~~~~s~-~~~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~i---l~~~~~t~~~~~~~~ 196 (339)
T PRK06840 124 VAKDLLYSDPSIENVLLVGGYRNSD-LVDYDNP--RTR-FMFNFAAGGSAALLKKDAGKNRI---LGSAIITDGSFSEDV 196 (339)
T ss_pred HHHHHHhcCCCccEEEEEeeccccc-ccCcCCC--Cee-eeccCCCceeEEEEEecCCCCce---EEEEEEEcCCccceE
Confidence 99999999 7789999999999886 3333221 110 01347999999999987653 11 0111111111 1
Q ss_pred ecCCCcC--ccceEEecCc-eEEEe-CchhHHH-----HHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHH
Q 016111 247 ILPGSDS--DVAGQFREMG-LTVHL-SKNVATV-----VSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEA 316 (395)
Q Consensus 247 ~~p~~~~--~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~ 316 (395)
.+|.... .........+ ..+.+ ++..++. ....++++++++|+++|+++ +|| +|++||.|.++++.+++
T Consensus 197 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~ 275 (339)
T PRK06840 197 RVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLE 275 (339)
T ss_pred EecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHH
Confidence 1121110 0000000111 12223 3444442 23457789999999999997 999 89999999999999999
Q ss_pred HcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 317 KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 317 ~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+||+|++|+. ++++||||+++|+|++|++++++ +++++| |+++++++|+|++|+++++||.+
T Consensus 276 ~Lgl~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 276 GLGLTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred HcCCCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecC
Confidence 9999999975 38999999999999999999987 889999 99999999999999999999975
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-47 Score=376.61 Aligned_cols=354 Identities=19% Similarity=0.257 Sum_probs=268.4
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhh---cc-CCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRV---TN-SDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAY 86 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~---~~-~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 86 (395)
..++++++..++|.|+. +++.+.+.+..... +. .+..++..++++||.+++||.+|++..+...
T Consensus 64 ~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~---------- 133 (478)
T PLN02932 64 RPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQ---------- 133 (478)
T ss_pred CCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccc----------
Confidence 46779999999999884 88999888876432 11 1111334678999999999999998854331
Q ss_pred CCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccch
Q 016111 87 DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCY 165 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~ 165 (395)
..+++++++.+++...+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++.. ..++++ +||+
T Consensus 134 -~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i-~~fdL~gmGCS 211 (478)
T PLN02932 134 -CLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNI-KSLNLGGMGCS 211 (478)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCc-eEEEeccchhh
Confidence 1247889999999999999999999999999999999999999999999999999999999998655 389998 8999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee
Q 016111 166 IGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ 245 (395)
Q Consensus 166 ~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 245 (395)
|++.||++|++++++++.++||||++|.+|..+ ++.+ ++..+.+.++|||||+|+||++.+... ....+++.+...
T Consensus 212 ggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~v~ 287 (478)
T PLN02932 212 AGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDR--KRAKYELVHTVR 287 (478)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEecccccc--cCcceEEEeeee
Confidence 999999999999999999999999999999754 3543 244456789999999999999865321 113456653322
Q ss_pred eec---CCCcCccceEEecCce-EEEeCchhHHHHHHHHHHHH----------------------HHhhcc--CCCCC-C
Q 016111 246 TIL---PGSDSDVAGQFREMGL-TVHLSKNVATVVSENIEKCL----------------------DEAFSP--FGIKD-W 296 (395)
Q Consensus 246 ~~~---p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~--~gl~~-~ 296 (395)
.+. +.+.+.+.+...++|. .+.++++++..+.+.++..+ +++++. .++.+ +
T Consensus 288 t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~ 367 (478)
T PLN02932 288 VHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDF 367 (478)
T ss_pred eeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhH
Confidence 221 1111112222222332 33445555544333322111 111211 12221 1
Q ss_pred -Cce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEE
Q 016111 297 -NSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 297 -~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
++| +|++||+|+.+++.+++.||++++++..++.++++||||+|+|+|+.|+++.++ |++++| |+|++++|
T Consensus 368 ~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaF 440 (478)
T PLN02932 368 KLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIAL 440 (478)
T ss_pred HhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEE
Confidence 356 899999999999999999999997776667789999999999999999999877 899999 99999999
Q ss_pred ccchhhhheeeeecC
Q 016111 375 GAGVTVDTVVLRSFP 389 (395)
Q Consensus 375 G~G~s~~a~ll~~~~ 389 (395)
|+|++|+++++|...
T Consensus 441 GsGf~~~s~vw~~~~ 455 (478)
T PLN02932 441 GSGFKCNSSVWVALR 455 (478)
T ss_pred eccHHHHHHHHHHhc
Confidence 999999999998764
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-48 Score=372.46 Aligned_cols=310 Identities=22% Similarity=0.341 Sum_probs=257.3
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.++|+|+|+++++++++.+.++ .++ .++.+++||++||+..+++
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~---~~~---------~~i~~~~gi~~r~~~~~~~-------------------- 49 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVD---TSD---------EWIVTRTGIKERRIAADDE-------------------- 49 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcC---Cch---------HHeecccCceEEEECCCCC--------------------
Confidence 47899999999999999999988752 121 5678889999999997766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.++++.||+++.+ +++++++|++++.||.+|
T Consensus 50 -----~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A 122 (318)
T TIGR00747 50 -----TSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVA 122 (318)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999988 77899999999999998754 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeee----eecC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~----~~~p 249 (395)
.++|++|..+++||+++|..+. +.++.+ +....+|||||+|+||++++... + ..+.+.+.+. ..+|
T Consensus 123 ~~~i~~g~~~~~Lvv~~e~~~~-~~~~~~-----~~~~~~~GDGAaA~lL~~~~~~~~i---~~~~~~~~~~~~~~~~~~ 193 (318)
T TIGR00747 123 KQYIESGKYKTVLVVGAEKLSS-TLDWTD-----RGTCVLFGDGAGAVVLGESEDPGGI---ISTHLGADGTQGEALYLP 193 (318)
T ss_pred HHHHHcCCCCEEEEEEehhhcC-cCCcCC-----CCeEEEEecceeEEEEeecCCCCcE---EEEEEEEcCCCcceEEEC
Confidence 9999999999999999999886 333332 22357899999999999977532 2 1223332221 1223
Q ss_pred CCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH
Q 016111 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT 328 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~ 328 (395)
..... .....++....+.++++.+.+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|.+|+..
T Consensus 194 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~- 268 (318)
T TIGR00747 194 AGGRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVK- 268 (318)
T ss_pred CCCcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeee-
Confidence 22111 01112222333788888888889999999999999997 999 9999999999999999999999999985
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 329 RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 329 ~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||||++||+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 269 --~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 269 --TVHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred --hHhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence 59999999999999999999998 889999 999999999999999999998
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-48 Score=376.20 Aligned_cols=305 Identities=15% Similarity=0.188 Sum_probs=243.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++.+.++ .+ .+|+.+++||++||++.+++
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~------------------- 49 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDE------------------- 49 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCc-------------------
Confidence 468999999999999999999998752 22 27899999999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|+++||+++|++++|||+||++|+++ +..|+.+.+|+++||+++.. ++++++++|+|++.||.+
T Consensus 50 ------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~-~~~dv~~~C~~~~~aL~~ 122 (347)
T PRK04262 50 ------DTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDL-TAADLEFACKAGTAALQA 122 (347)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCc-eEEEHHHhHHHHHHHHHH
Confidence 3899999999999999999999999999999988 78899999999999998643 378999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDS 253 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 253 (395)
|.+++++|..++||||++|.... +|.+ .. ..+|||||+|+||++++.. .++.+.... .+...+
T Consensus 123 A~~~i~sg~~~~aLVv~~e~~~~---~~~~-----~~-~~~~GDGA~A~ll~~~~~~-------~~i~~~~~~-~~d~~d 185 (347)
T PRK04262 123 AMGLVKSGMIKYALAIGADTAQG---APGD-----AL-EYTAAAGGAAFIIGKEEVI-------AEIEATYSY-TTDTPD 185 (347)
T ss_pred HHHHHHcCCCCEEEEEEEeeecc---CCCC-----CC-CCcCCCCcEEEEEecCccc-------ceeeccccc-cccchh
Confidence 99999999999999999998432 2332 11 2467999999999975432 222211100 111111
Q ss_pred ccc---eEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHH
Q 016111 254 DVA---GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329 (395)
Q Consensus 254 ~~~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~ 329 (395)
.+. +.....+.. +... ..+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|++.++
T Consensus 186 ~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~ 260 (347)
T PRK04262 186 FWRREGEPYPRHGGR--FTGE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL 260 (347)
T ss_pred hcCCCCCcCCCcCce--ecch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc
Confidence 110 001111111 1111 1223567889999999999997 999 999999999999999999999999998642
Q ss_pred HHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 330 ~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++++||||++||+|++|++++++ +++| |+|++++||+|++|.++++||.+
T Consensus 261 -~~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 261 -LTPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred -hhhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence 47999999999999999999864 6789 99999999999999999999965
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=376.81 Aligned_cols=331 Identities=18% Similarity=0.210 Sum_probs=256.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.|+|+|+|+++++|+++.+.++... +..+ ...+|+++++||++||++.+++. .+..
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~--~~~~---~~~~~i~~~~Gi~~R~~~~~~~~---~~~~----------- 61 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLIN--GKPS---RARRIILRNNGIKTRHYALDPEG---RPTH----------- 61 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhcc--CCcH---HHHHHHHHhCCCceEEEEECCCC---CCCC-----------
Confidence 368999999999999999999988764321 1111 12368999999999999875420 1111
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|+++||+++.. +++++.+|+|++.||.+
T Consensus 62 ------~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~ 133 (378)
T PRK06816 62 ------SNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKY 133 (378)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHH
Confidence 3789999999999999999999999999999998 78898899999999998754 88999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCC----------------chhhhhhhhhccccEEEEEecCCCC-CCCCCC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDAN----------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKP 236 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~----------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~ 236 (395)
|..++++|..++||||++|.+|..+ ++.+.. .+....+++|||||+|+||++.+.. +.
T Consensus 134 A~~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---- 208 (378)
T PRK06816 134 AYLSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---- 208 (378)
T ss_pred HHHHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc----
Confidence 9999999999999999999998643 232100 0111124579999999999986652 21
Q ss_pred ceEE--Eeeee--e----ec-CCCc-----CccceEEe------cCc-eEEEe-CchhHHHHHHHHHHHHHHhhccCCCC
Q 016111 237 LFQI--VSGAQ--T----IL-PGSD-----SDVAGQFR------EMG-LTVHL-SKNVATVVSENIEKCLDEAFSPFGIK 294 (395)
Q Consensus 237 ~~~~--~~~~~--~----~~-p~~~-----~~~~~~~~------~~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~ 294 (395)
.+.+ ....+ . .. +... ....|... .++ ..+.+ ++.+++.+...+++.++++|+++|++
T Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~ 288 (378)
T PRK06816 209 SLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLD 288 (378)
T ss_pred eEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCC
Confidence 1221 11110 0 01 1100 01112110 112 12333 67788888888899999999999999
Q ss_pred CCCce-EEEEcCCChHHHHHHHHHc-----CCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCce
Q 016111 295 DWNSL-FWIVQPGGPAIVNQIEAKL-----GLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEW 368 (395)
Q Consensus 295 ~~~di-~~i~hq~~~~~~~~i~~~l-----gi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~ 368 (395)
+ +|| +|++||+|.++++.++++| |+|++|++. ++++||||++||+|++|++++++ |++++| |+
T Consensus 289 ~-~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~---~~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~ 357 (378)
T PRK06816 289 P-DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFT---NLATVGNTGSASIYIMLDELLNS----GRLKPG---QK 357 (378)
T ss_pred h-hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEE---eccccccccchHHHHHHHHHHHc----CCCCCC---CE
Confidence 7 999 9999999999999999987 999999886 59999999999999999999998 899999 99
Q ss_pred EEEEEEccc-hhhhheeeeec
Q 016111 369 GVMFGIGAG-VTVDTVVLRSF 388 (395)
Q Consensus 369 vll~~~G~G-~s~~a~ll~~~ 388 (395)
|++++.|+| +++|.++|+|.
T Consensus 358 vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 358 ILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEEEEecccchhheeEEEEEC
Confidence 999987766 99999999984
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-47 Score=366.66 Aligned_cols=311 Identities=23% Similarity=0.347 Sum_probs=256.9
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.++|+|+|+++++++++.+..+ .. .+++.+++||++|+++.+++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~------------------- 50 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDE------------------- 50 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCC-------------------
Confidence 358899999999999999999998742 11 15677899999999987766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+.+||+.+.+ +++++++|++++.||..
T Consensus 51 ------~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~ 122 (319)
T PRK09352 51 ------TTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALST 122 (319)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHH
Confidence 3899999999999999999999999999999987 66888999999999997654 78899999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee----ecC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT----ILP 249 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~p 249 (395)
|.++|++|..++|||+++|.++..+ ++.+ +...++|||||+|+||++++..++ ..+++.+.+.. ..|
T Consensus 123 A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~ 193 (319)
T PRK09352 123 ADQFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEEPGI---LSTHLGSDGSYGDLLYLP 193 (319)
T ss_pred HHHHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCCCCe---EEEEEEEcCCCCCeEEeC
Confidence 9999999999999999999988633 3322 223679999999999999765322 12333332211 123
Q ss_pred CCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 250 GSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
.......+. .+ .+.+ ++.+++.+.+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|.+++..
T Consensus 194 ~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~ 268 (319)
T PRK09352 194 GGGSRGPAS---PG-YLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV 268 (319)
T ss_pred CCCCCCCCC---CC-ceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh
Confidence 222111100 11 2333 677888888889999999999999997 999 9999999999999999999999999864
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++.+|||++++|+|++|++++++ |++++| |+++++++|+|++|++++|||+
T Consensus 269 ---~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 269 ---TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred ---hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence 59999999999999999999998 889999 9999999999999999999985
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-47 Score=369.69 Aligned_cols=305 Identities=14% Similarity=0.138 Sum_probs=239.6
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.|+|+|+|+++++|+++.+.++ .+ .+|+.+++||++||++.++++
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~~------------------- 49 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDED------------------- 49 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCCC-------------------
Confidence 36899999999999999999987742 22 278889999999999987763
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+.+|+++|+++||+++|+++++||+||++|+++ +..|+.+..+++.||++... ++++++.+|+|++.||.+|
T Consensus 50 ------~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~-~~~dv~~aC~g~~~al~~A 122 (345)
T TIGR00748 50 ------TATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDL-TAADLEFACKAGTAGIQAC 122 (345)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCc-eEEEHHHhHHHHHHHHHHH
Confidence 899999999999999999999999999999888 77899999999999997443 3899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeec--CCCc
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL--PGSD 252 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~--p~~~ 252 (395)
.++|++|..+++|||++|..+. +|.+ . ..+.|||||+|+||++.+.. .++........ +...
T Consensus 123 ~~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~~-------~~~~~~~~~~~d~~~~~ 186 (345)
T TIGR00748 123 MGLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNTV-------AYFEGTYSYTTDTPDFW 186 (345)
T ss_pred HHHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCcc-------eEeecccceeccccccc
Confidence 9999999999999999999874 2332 1 13678999999999975532 11111000000 0000
Q ss_pred CccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHH
Q 016111 253 SDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHV 331 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~ 331 (395)
..........+..+.....+++. ..++++++|+++|+++ +|| +|++||+|.++++.+.++||+|++|++.+. .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~ 260 (345)
T TIGR00748 187 RREGEPYPRHGGRFTGEPAYFHH----VVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-L 260 (345)
T ss_pred ccCCCcCCCcCCeecChHHHHHH----HHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccc-c
Confidence 00000000001111111334443 3478899999999997 999 999999999999999999999999988641 1
Q ss_pred HHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 332 LSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 332 ~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.++||||++||+|++|+++++. +++| |+|++++||+|++|++++++|.+
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQD 309 (345)
T ss_pred ccccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEch
Confidence 3899999999999999998864 7899 99999999999999999999974
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=367.09 Aligned_cols=343 Identities=19% Similarity=0.271 Sum_probs=253.6
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhc---cCCchhHHH---------HHHHHHHHhcCcceeeeeecchhhhcCCCC
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVT---NSDHMTLLK---------QKFKRICEKSNVKKRYFHVTEDILKKNPNI 83 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 83 (395)
+++|.|+|+|+|+++++|+++.+.+.... ..++.+++. ...+||.+++||++||++.+.+.+. .+
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~--~~- 78 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILD--PD- 78 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCc--cc-
Confidence 57899999999999999999988753110 001100110 0257899999999999986421110 00
Q ss_pred cCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCc
Q 016111 84 CAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQ 162 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~ 162 (395)
...+...+++..+.....+|+.+|+++||+++|+++++||.||++++++ +..|+.+..|++.||++. . +++++.
T Consensus 79 --~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~ 153 (372)
T PRK07515 79 --RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNV 153 (372)
T ss_pred --ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecc
Confidence 0112233333333345689999999999999999999999999999887 788999999999999973 3 789999
Q ss_pred cchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe
Q 016111 163 GCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242 (395)
Q Consensus 163 ~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~ 242 (395)
+|+|++.||.+|.++|++|..++|||+++|.++. +.++. ++...++|||||+|+||++.+.... +..+++..
T Consensus 154 aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~-----d~~~~~lfGDgAaA~vL~~~~~~~~--~~~~~il~ 225 (372)
T PRK07515 154 ACSSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFR-----DRDSHFIFGDVATAVIVERADTATS--AGGFEILG 225 (372)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-ccccc-----CCCCCEEecCccEEEEEeecccccc--CCCceEEE
Confidence 9999999999999999999999999999999886 33333 2224789999999999998654210 01122322
Q ss_pred ee-----eeecCCCcCcc---c-eEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHH
Q 016111 243 GA-----QTILPGSDSDV---A-GQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV 311 (395)
Q Consensus 243 ~~-----~~~~p~~~~~~---~-~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~ 311 (395)
.. ...++...+.. . .........+.+ |+.+++.+.+.++++|+++|+++|+++ +|| +|++||+|.+++
T Consensus 226 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~ 304 (372)
T PRK07515 226 TRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMN 304 (372)
T ss_pred EEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHH
Confidence 11 01111000000 0 001111123455 788899999999999999999999997 999 999999999999
Q ss_pred HHHHHH-cCC--CccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 312 NQIEAK-LGL--KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 312 ~~i~~~-lgi--~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+.+.++ ||+ +.++.+. ++++||||+|||+|++|+++. +++++| |+|++++||+|++|++++||.
T Consensus 305 d~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 305 QLIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 999988 564 5566554 599999999999999999974 347899 999999999999999999985
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=361.44 Aligned_cols=352 Identities=16% Similarity=0.197 Sum_probs=261.6
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++||.+ +...|.... ..+
T Consensus 94 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~ri~~~sgig~-~t~~p~~~~----------~~~ 160 (502)
T PLN02377 94 RPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFD--DSSLEFQRKILERSGLGE-DTYVPEAMH----------YIP 160 (502)
T ss_pred CCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCCC-ccccCchhc----------cCC
Confidence 4567999999999988 4899999998876443222 455667889999999988 444453210 123
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecC-ccchhHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGA 168 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~ 168 (395)
.+..++.+.+.+.+++.+|+++||+++|++|+|||+||+ ++|+ +..|+++.+|+++||+++.. ..++++ +||+|++
T Consensus 161 ~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v-~afdL~gmGCsggl 238 (502)
T PLN02377 161 PRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNI-RSFNLGGMGCSAGV 238 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCC-eEEecccchhhHHH
Confidence 455799999999999999999999999999999999987 7888 68999999999999999655 389998 7999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCC-CceEEEeeeeee
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEK-PLFQIVSGAQTI 247 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~-~~~~~~~~~~~~ 247 (395)
.||++|++++++++.++||||++|.+|..+ ++.+ +.......++|||||+|+||++.+....+.. ..+.+.......
T Consensus 239 ~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~ 316 (502)
T PLN02377 239 IAVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGN-KKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGA 316 (502)
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEecccccc-CCCC-CccccccceeeccccEEEEEecccccccccccccceEEEEEEEE
Confidence 999999999999999999999999999744 3443 2223334699999999999998543210000 011222221111
Q ss_pred cCCCcCccceEEecCce-EEE-------------------eCc-------hhHHHHHHHHHHHHHHhhccCC-CCCCCce
Q 016111 248 LPGSDSDVAGQFREMGL-TVH-------------------LSK-------NVATVVSENIEKCLDEAFSPFG-IKDWNSL 299 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~-~~~-------------------~~~-------~v~~~~~~~~~~~i~~~L~~~g-l~~~~di 299 (395)
.+...+.+.+...+.|. .+. +++ .++.++...+++.+++.++..+ ... +++
T Consensus 317 d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~di 395 (502)
T PLN02377 317 DDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-LAF 395 (502)
T ss_pred cCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-hhc
Confidence 11100000000000010 000 122 2333556666777777776654 333 677
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccch
Q 016111 300 -FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378 (395)
Q Consensus 300 -~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 378 (395)
+|++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 396 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsGf 468 (502)
T PLN02377 396 DHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSGF 468 (502)
T ss_pred CEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEcccc
Confidence 999999999999999999999975555556689999999999999999999987 999999 999999999999
Q ss_pred hhhheeeeecC
Q 016111 379 TVDTVVLRSFP 389 (395)
Q Consensus 379 s~~a~ll~~~~ 389 (395)
+|+++++||..
T Consensus 469 ~~~s~v~~~~~ 479 (502)
T PLN02377 469 KCNSAVWEALR 479 (502)
T ss_pred EeeeEEEEEec
Confidence 99999999975
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-44 Score=357.70 Aligned_cols=351 Identities=15% Similarity=0.221 Sum_probs=261.2
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++|+.+..+..+.-. ...
T Consensus 110 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sg~g~~ty~P~~~~-----------~~~ 176 (521)
T PLN02854 110 RSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFE--DETVQFQRRISTRSGLGDETYLPRGIT-----------SRP 176 (521)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCccccCcccc-----------CCC
Confidence 4567999999999987 4899999988876443222 455677889999999998876654321 112
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecC-ccchhHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGA 168 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~ 168 (395)
.+..++..++........|++++|+++|++|+|||+||++ |++ +..|+++.+|+++||+++.. .+++++ +||+|++
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i-~afdLsgmGCSggl 254 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDI-KSYNLGGMGCSAGL 254 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCc-eEEecccchhhhHH
Confidence 3346778888889999999999999999999999999975 677 68999999999999998654 389998 8999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee--
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT-- 246 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~-- 246 (395)
.||++|++++++++.++||||++|.+|..+. +. .++....+.++|||||+|+||++.+... ....+++.+....
T Consensus 255 ~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y-~g-~Drs~lv~~~LFgDGAAAvlLs~~~~~~--~~~k~~L~~~v~t~~ 330 (521)
T PLN02854 255 ISIDLANDLLKANPNSYAVVVSTENITLNWY-FG-NDRSMLLCNCIFRMGGAAVLLSNKARDR--KRSKYQLVHTVRTHK 330 (521)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeecCCC-CC-CchhhhcceeeeccceeEEEEecccccc--cccchheeeEEEEEE
Confidence 9999999999999999999999999985432 11 1233334478999999999999855221 0112332211110
Q ss_pred ----------ecCCC-cCcc----ceEE-ecCc----eEEEe-CchhHHHHHHH--HHHHHHHhhccCCCCCC-----Cc
Q 016111 247 ----------ILPGS-DSDV----AGQF-REMG----LTVHL-SKNVATVVSEN--IEKCLDEAFSPFGIKDW-----NS 298 (395)
Q Consensus 247 ----------~~p~~-~~~~----~~~~-~~~g----~~~~~-~~~v~~~~~~~--~~~~i~~~L~~~gl~~~-----~d 298 (395)
..+.. .+.. ...+ ...+ ..+++ |+.++...... +...+++.|.++|+++. ++
T Consensus 331 ~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~d 410 (521)
T PLN02854 331 GADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLA 410 (521)
T ss_pred eeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCccccc
Confidence 11110 0000 0000 0000 01112 44444433222 45678888989998852 36
Q ss_pred e-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccc
Q 016111 299 L-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAG 377 (395)
Q Consensus 299 i-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G 377 (395)
+ +|++||+|+.+++.++++||+++++...++.++.+||||+|+|+|+.|+++.++ |++++| |+|++++||+|
T Consensus 411 idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsG 483 (521)
T PLN02854 411 FEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSG 483 (521)
T ss_pred CcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchh
Confidence 7 999999999999999999999954444444579999999999999999999987 999999 99999999999
Q ss_pred hhhhheeeeecC
Q 016111 378 VTVDTVVLRSFP 389 (395)
Q Consensus 378 ~s~~a~ll~~~~ 389 (395)
++|+++++||..
T Consensus 484 ft~~sav~~~~~ 495 (521)
T PLN02854 484 FKCNSAVWKALR 495 (521)
T ss_pred hhhhheeeEEec
Confidence 999999999986
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=353.83 Aligned_cols=352 Identities=16% Similarity=0.216 Sum_probs=256.2
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+. +++.+.+.+.....+..+ ++..+++.++.+++|+.+..+..+.-. . ..
T Consensus 98 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sglg~~t~~p~~~~-~----------~~ 164 (511)
T PLN02192 98 RPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFT--EENLEFQRKILERSGLGESTYLPEAVL-N----------VP 164 (511)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCcccCChhhc-c----------CC
Confidence 35679999999999884 899999998876443222 455678889999999999877654321 1 11
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccchhHHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGAT 169 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~~ 169 (395)
.+..++..++....+...|+++||+++|++|+|||+||++++..+..|+++..|+++||++... ..++++ +||+|++.
T Consensus 165 ~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i-~afdLsgmGCSggl~ 243 (511)
T PLN02192 165 PNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-LSYNLGGMGCSAGLI 243 (511)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCc-eEEEcccchhhhHHH
Confidence 2235677788899999999999999999999999999987553378999999999999998554 389998 79999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
||++|++++++++.++||||++|.+|..+. +.+ ++......++|||||+|+||++.+... ..+.+++.+....+.+
T Consensus 244 aLdlA~~lL~a~~~~~aLVVstE~~S~n~y-~g~-drs~lv~n~LFgDGAaAvLLs~~~~~~--~~~k~~L~~~vrt~~~ 319 (511)
T PLN02192 244 SIDLAKHLLQVHPNSYALVISMENITLNWY-FGN-DRSMLVSNCLFRMGGAAILLSNKRSDR--RRSKYQLVHTVRTHKG 319 (511)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEEeccccCC-CCC-CHHHHhccccccccceEEEEecccccc--ccccceeeeeEEEEec
Confidence 999999999999999999999999995442 111 233333448999999999999854321 1123444432222233
Q ss_pred CCcCccceEE----ecCceEEEeCchhHHHHHHHHHHHHHHh--------------hccCC-------CC--C---CCce
Q 016111 250 GSDSDVAGQF----REMGLTVHLSKNVATVVSENIEKCLDEA--------------FSPFG-------IK--D---WNSL 299 (395)
Q Consensus 250 ~~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------l~--~---~~di 299 (395)
.++..+.+.. .+.+..+.++++++..+...++..++.+ +.-.| ++ + -.+|
T Consensus 320 ~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~I 399 (511)
T PLN02192 320 ADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAF 399 (511)
T ss_pred CChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhh
Confidence 2222221111 0112234445555544443332222111 00000 10 0 0246
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccch
Q 016111 300 -FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378 (395)
Q Consensus 300 -~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 378 (395)
+|++||+|+++++.+++.||++++++..++.++.+||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 400 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf 472 (511)
T PLN02192 400 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGF 472 (511)
T ss_pred ceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchH
Confidence 899999999999999999999985554455579999999999999999999987 899999 999999999999
Q ss_pred hhhheeeeecC
Q 016111 379 TVDTVVLRSFP 389 (395)
Q Consensus 379 s~~a~ll~~~~ 389 (395)
+|+++++||..
T Consensus 473 ~~~sav~~~~~ 483 (511)
T PLN02192 473 KCNSAVWKALR 483 (511)
T ss_pred hhhhhheeeec
Confidence 99999999975
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=338.69 Aligned_cols=349 Identities=19% Similarity=0.280 Sum_probs=269.4
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
...+++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++||.+--+..+.- +...| .++
T Consensus 56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~s~~F~~~i~~rSGlg~et~~p~~~-~~~~~------~~~ 126 (466)
T PLN00415 56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYT--EETIQFMTRILNRSGLGDDTYSPRCM-LTSPP------TPS 126 (466)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCCCCeeeCCcc-ccCCC------CCC
Confidence 4568999999999987 4899999988875433222 45566788899999998865543322 11001 111
Q ss_pred hhHHHHHHHHhHHHHHHH-HHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCc-cchhH
Q 016111 91 LDSRQDILVREVPKLGEE-AATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQ-GCYIG 167 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~-Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~-~C~~~ 167 (395)
+ +. .+...+|+.. |++++|+++|++|+|||+||+ ++|+ +..|+++.+|+.+||+++.. ..++++. ||+|+
T Consensus 127 ~----~~-~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v-~~~dL~gmGCsgg 199 (466)
T PLN00415 127 M----YE-ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDV-KTYNLSGMGCSAG 199 (466)
T ss_pred h----hh-hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCc-eEEEeccccchHH
Confidence 1 11 1245666666 777889999999999999985 5778 58999999999999999665 3789985 99999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
+.||++|++++++++.++||||++|.+|..+.++++ +......++|||||+|+||++++... ..+.|++......+
T Consensus 200 v~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~vrt~ 275 (466)
T PLN00415 200 AISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQDR--VRSKYELTHIVRTH 275 (466)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcccc--cCccceeeeEEEec
Confidence 999999999999999999999999999975544332 44445568999999999999865421 12356554333333
Q ss_pred cCCCcCccc---eEEecCce-EEEeCchhHHHHHHHHHHHHHHhhccCC----------------------CCC----CC
Q 016111 248 LPGSDSDVA---GQFREMGL-TVHLSKNVATVVSENIEKCLDEAFSPFG----------------------IKD----WN 297 (395)
Q Consensus 248 ~p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------l~~----~~ 297 (395)
.|.+++.+. |...++|+ .+.++++++..+.+.++..++.+ ...+ +++ ++
T Consensus 276 ~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~ 354 (466)
T PLN00415 276 KGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFK 354 (466)
T ss_pred CCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCCcc
Confidence 366665555 56666776 77889999999888877766553 2222 221 12
Q ss_pred c-e-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEc
Q 016111 298 S-L-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 298 d-i-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
. + +|++|++++++++.+++.||++++++..+|+++++||||+|+|+++.|+++..+ ++.++| |++++++||
T Consensus 355 ~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFG 427 (466)
T PLN00415 355 LCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFG 427 (466)
T ss_pred ccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEc
Confidence 1 4 899999999999999999999999999999999999999999999999999877 788999 999999999
Q ss_pred cchhhhheeeeecC
Q 016111 376 AGVTVDTVVLRSFP 389 (395)
Q Consensus 376 ~G~s~~a~ll~~~~ 389 (395)
+|+++.++++|+..
T Consensus 428 pGf~~es~v~~~~~ 441 (466)
T PLN00415 428 SGFKCNSIVWRALR 441 (466)
T ss_pred CcchhhHhHHHHhc
Confidence 99999999999975
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=338.79 Aligned_cols=308 Identities=26% Similarity=0.366 Sum_probs=247.5
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.++|+|+|+++++|+++++.++ . .++...+||++||+..+++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~-------------------- 46 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDE-------------------- 46 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCC--------------------
Confidence 36899999999999999999988752 1 2567789999999997655
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+..+|+.+|++++|+++|+++++||+||++++++ +..|+.+.+|++.||++..+ +++++++|++++.||.+|
T Consensus 47 -----~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A 119 (324)
T cd00827 47 -----DVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLA 119 (324)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999888 56889999999999998543 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCc--
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSD-- 252 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~-- 252 (395)
.++|++|..+++||+++|.++.... + .....++|||||+|+||++.+... .+.+........+...
T Consensus 120 ~~~i~~g~~~~vlvv~~e~~~~~~~---~----~~~~~~~~gdgaaA~ll~~~~~~~-----~~~i~~~~~~~~~~~~~~ 187 (324)
T cd00827 120 ANLVESGPWRYALVVASDIASYLLD---E----GSALEPTLGDGAAAMLVSRNPGIL-----AAGIVSTHSTSDPGYDFS 187 (324)
T ss_pred HHHHHcCCCCEEEEEEEHHhhhccc---C----CCCccccccCceEEEEEecCcccc-----cCCceeeeeecccccccC
Confidence 9999999999999999999986331 1 112478999999999999877520 0111111111111110
Q ss_pred --CccceEEe-----cCceEEEeC---chhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCCh-HHHHHHHHHcCC
Q 016111 253 --SDVAGQFR-----EMGLTVHLS---KNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGP-AIVNQIEAKLGL 320 (395)
Q Consensus 253 --~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~-~~~~~i~~~lgi 320 (395)
..+..... .....|.+. +.++..+.+.++++++++|++.|++ +|+ +|++||+|. .+++.+.+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~ 265 (324)
T cd00827 188 PYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGG 265 (324)
T ss_pred ccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccc
Confidence 00100000 011234442 4788888899999999999999988 678 999999999 999999999999
Q ss_pred CccchhHHHH-HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 321 KQQKLSATRH-VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 321 ~~e~~~~~~~-~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+.+++..++. ++++|||++++|+|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 266 PPEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred hHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence 9888876432 69999999999999999999998 889999 9999999999999998864
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=328.97 Aligned_cols=304 Identities=19% Similarity=0.216 Sum_probs=238.7
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQD 96 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
|+|.++|.|+|+++++++++++..+ .+ .+|+.+.+|+++|++..++|+
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g---~~---------~~~~~~g~G~~~~~~~~~~ed-------------------- 48 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARG---VD---------PEKFHIGIGQKKMAVPPIDED-------------------- 48 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhC---CC---------HHHHHhhcCceEEeeCCCCCC--------------------
Confidence 5799999999999999999998742 22 267888999999999887763
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.+|+++|++++|+++ ++++||+||++|+++ +..|+.+..|++.||+++.+ ++++++++|+|++.||.+|.
T Consensus 49 -----~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~-~~~dv~~aC~gg~~aL~~A~ 120 (379)
T TIGR01835 49 -----IVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFC-RSFELKQACYGATAALQMAK 120 (379)
T ss_pred -----HHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCc-eEEEeccccHHHHHHHHHHH
Confidence 7999999999999998 899999999999999 77899999999999998654 38999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCcc
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV 255 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 255 (395)
+++.+|+.++||||++|.... . +.. ....+|||||+|+||++++. + +.+..... .. +.+.+
T Consensus 121 ~~i~s~~~~~aLVv~~D~a~~--~-~~~------~~~~~~GdGA~A~Ll~~~~~--i-----~~~~~~~~-~~--t~~~~ 181 (379)
T TIGR01835 121 GHVALSPDRKVLVIASDIAKY--G-LES------PGEPTQGAGAVAMLVSADPK--L-----LAINEDSV-LY--TDDIM 181 (379)
T ss_pred HHHHcCCCCeEEEEEeehhhc--c-cCC------CCCccccCccEEEEEecCCC--e-----eEEeccce-ee--ecCCC
Confidence 999999999999999999653 1 111 12467999999999998653 1 22211000 00 11111
Q ss_pred ceEEecCce-EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHH----HHHHHHHcCCCc-cchh-
Q 016111 256 AGQFREMGL-TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAI----VNQIEAKLGLKQ-QKLS- 326 (395)
Q Consensus 256 ~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~----~~~i~~~lgi~~-e~~~- 326 (395)
++ .++.+. ...+ ++.....+.+.++++++++|+++|+++ +|+ +|++||++.++ ++.+.+.++++. +++.
T Consensus 182 df-~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~ 259 (379)
T TIGR01835 182 DF-WRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN 259 (379)
T ss_pred Cc-cCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence 10 111121 1223 677777888899999999999999997 999 99999998777 344666778773 3333
Q ss_pred ---HHHHHHHhcCCCccchHHHHHHHHHHhhhhcC-CccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ---ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG-KVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ---~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g-~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.++.+.+++|||+++|+|++|+.+++. + ++++| |+|+|+++|+|+......++..
T Consensus 260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~ 318 (379)
T TIGR01835 260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLV 318 (379)
T ss_pred HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEc
Confidence 233468999999999999999999986 4 68999 9999999999999877777664
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=311.16 Aligned_cols=306 Identities=18% Similarity=0.220 Sum_probs=234.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeee--cchhhhcCCCCcCCCCCChh
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHV--TEDILKKNPNICAYDGSSLD 92 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~--~~~~~~~~~~~~~~~~~~~~ 92 (395)
.+++|.++|.|+|+++|+|+++.+.+ +.++ +|+ .+||.+|+++. ++|
T Consensus 3 ~~vgI~gig~Y~P~~~v~n~eLa~~~---g~~~---------~~~--~~GI~~r~~ava~~~E----------------- 51 (459)
T PLN02577 3 KNVGILAMEVYFPPTCVQQEALEAHD---GVSK---------GKY--TIGLGQDCMAFCTDVE----------------- 51 (459)
T ss_pred CccEEEEEEEeCCCeEEcHHHHHHHh---CCCH---------HHH--hhccceeEeccCCCCC-----------------
Confidence 36899999999999999999998875 2232 675 68999999764 555
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceecCccchhHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLT---KMLGLNPSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~---~~Lgl~~~~~~~~~i~~~C~~~~ 168 (395)
++.+||++|++++|+++|+++++||+||++|+|+ +..|+++..|+ ++||.++. +++|++.+|+|++
T Consensus 52 --------d~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~--~afDi~~AC~G~~ 121 (459)
T PLN02577 52 --------DVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDI--EGVDSTNACYGGT 121 (459)
T ss_pred --------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCc--EEeehhhhhHHHH
Confidence 3899999999999999999999999999999999 88999998886 67887765 3899999999999
Q ss_pred HHHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee
Q 016111 169 TAIRMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT 246 (395)
Q Consensus 169 ~aL~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.||.+|.++|++|. .++||||++|..+... +|. ...+||||+|+||+.++.. .++....+ .
T Consensus 122 ~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~~------~l~~~~~g-~ 184 (459)
T PLN02577 122 AALLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAPI------VFESKYRG-S 184 (459)
T ss_pred HHHHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCCc------eeeccccc-c
Confidence 99999999999986 5999999999988532 232 2346999999999975531 12111000 0
Q ss_pred ecCCCcCccceEEecCc--eEEEe-CchhHHHHHHHHHHHHHHhhccC------CCCCCCce-EEEEcCCChHHHHHHHH
Q 016111 247 ILPGSDSDVAGQFREMG--LTVHL-SKNVATVVSENIEKCLDEAFSPF------GIKDWNSL-FWIVQPGGPAIVNQIEA 316 (395)
Q Consensus 247 ~~p~~~~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~i~hq~~~~~~~~i~~ 316 (395)
.+.+.++ .+++++ ....+ |+.+++++.+.++.++++++++. |++. +|+ +++|||+..+|.+...+
T Consensus 185 ---~~~~~~D-f~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~~ 259 (459)
T PLN02577 185 ---HMAHVYD-FYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSFA 259 (459)
T ss_pred ---cCcccch-hcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHHH
Confidence 0001111 012221 11333 89999999999999999998877 7886 899 99999998888766555
Q ss_pred HcCCC----------------------------------------------ccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 317 KLGLK----------------------------------------------QQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 317 ~lgi~----------------------------------------------~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+|.+. .+|+..+...-+++||++++|+++.|..+
T Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~Sl 339 (459)
T PLN02577 260 RLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASL 339 (459)
T ss_pred HHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHH
Confidence 54311 02333333356899999999999999999
Q ss_pred HHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 351 RRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 351 ~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++.. ....+| ++|+++|+|+|......-+++.+
T Consensus 340 L~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 340 VHNK---HSELAG---KRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred Hhhc---cccCCC---CEEEEEeecCCccceeEEEEEeC
Confidence 9752 113388 99999999999998888887765
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=283.86 Aligned_cols=225 Identities=44% Similarity=0.707 Sum_probs=193.7
Q ss_pred ccccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCC
Q 016111 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNI 83 (395)
Q Consensus 4 ~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 83 (395)
|.++++.+...++.+|.|||+.+|+++++++++.+.+.+....++.++.++++.++++++||++||...|.+.+...|.+
T Consensus 2 ~~~~~~~~~~~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~ 81 (226)
T PF00195_consen 2 VSEMRRAQRSPGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSF 81 (226)
T ss_dssp HHHHHHHHS-SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGG
T ss_pred HHHHhhcccCCCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcch
Confidence 67889999999999999999999999999999999876655555545677888999999999999999988777777877
Q ss_pred cCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCcc
Q 016111 84 CAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQG 163 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~ 163 (395)
..+..|++.+|++.|.+...+|+.+|+++||+++|++++||++||++|||++..|++..+|.++|||++.+.++....+|
T Consensus 82 ~~~~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~G 161 (226)
T PF00195_consen 82 WDFADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMG 161 (226)
T ss_dssp HSSSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-G
T ss_pred hhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccc
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred chhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC
Q 016111 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 164 C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
|++++.+|+.|..+.++++..+||||++|.+|.+|+.|++.+.++.....+|||||+|+||+.+|
T Consensus 162 C~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 162 CAGGAAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp GGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred hhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999999999999999999999999878756565678889999999999999999875
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=282.56 Aligned_cols=308 Identities=19% Similarity=0.239 Sum_probs=246.5
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|.|+|..+|..+++++..+ -+ .+++.+.+|+.++.+..++|+
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g----~d--------~~k~~~gl~~~e~sv~~~~ED------------------ 50 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWG----VD--------PEKIKKGLGVEEKSVPPWDED------------------ 50 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcC----CC--------hHHhhhccccccccCCCCchh------------------
Confidence 368999999999999999999998732 11 266788899999999988884
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..||++||+++|+++++||.+|++|+++|.|+ +...+.+..|++.||+++.. +++++..+|.++..||+.
T Consensus 51 -------~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~-~~~d~~~AC~agT~aL~~ 122 (377)
T COG3425 51 -------AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSA-RAADVEFACYAGTAALQA 122 (377)
T ss_pred -------HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCce-ehhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998 88999999999999999886 599999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee--cCCC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI--LPGS 251 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~--~p~~ 251 (395)
|..++.+|+.+++|||++|+.... |.+ ......|+||+|+||++++.. ...+...+..+ .|+.
T Consensus 123 a~~~v~s~~~~~~LvI~sD~a~~~---~~~------~~E~t~GAGavA~lIg~n~~~------~a~~~~~~syt~d~~DF 187 (377)
T COG3425 123 AIGWVESGMISYGLVIGADTAQYA---PGD------ALEYTAGAGAVAFLIGKNPPI------VAEFEGTGSYTTDTPDF 187 (377)
T ss_pred HHHHHHcCCccceEEEeehhhccC---CCc------ccCccCCCceEEEEEccCCCe------EEEecCceEEecCCCcc
Confidence 999999999999999999998742 322 124668999999999997432 12221111111 1111
Q ss_pred cCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHH
Q 016111 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
.....+.....+ |+..-..+.+++..+.++++++.|+++ +|+ ++++||++.++....++.++++.+++..+..
T Consensus 188 wRp~~~~yp~~d-----g~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~ 261 (377)
T COG3425 188 WRPDGQPYPYVD-----GRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLV 261 (377)
T ss_pred cccCCCcccccC-----ceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccch
Confidence 110001111111 222234567788899999999999997 999 9999999999999999999999888877744
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
..++.||++++|+++.|..+++. -+ .+| |+|+++++|+|......-++..+
T Consensus 262 ~~~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 262 YPQRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred hhhhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEecc
Confidence 45689999999999999999997 33 589 99999999999887666555543
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=279.15 Aligned_cols=307 Identities=19% Similarity=0.202 Sum_probs=211.9
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeee--eecchhhhcCCCCcCCCCCChhH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF--HVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
+++|.++|.|+|+++|+|+++++.. +.+ .+|+ .+||.+|++ +.++|
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~---g~~---------~~k~--~~GI~~rr~av~~~~E------------------ 48 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYD---GVS---------AGKY--TIGLGQTKMGFCTDRE------------------ 48 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhc---CCC---------HHHh--eechhheecccCCCCC------------------
Confidence 5799999999999999999998764 221 1555 599999994 55555
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHc---CCCCccccceecCccchhHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKML---GLNPSVKRVMLYFQGCYIGAT 169 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~L---gl~~~~~~~~~i~~~C~~~~~ 169 (395)
++.+|+++|++++|+++++++++||+||++|.++ +..|+.+..|++.| |.++. ++++++++|+|++.
T Consensus 49 -------d~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~--~~fDi~~AC~G~t~ 119 (454)
T TIGR01833 49 -------DINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDV--EGIDTTNACYGGTA 119 (454)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCc--eEEeccccchhHHH
Confidence 3899999999999999999999999999999999 89999999999855 45554 38999999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCC-CceEEEeeeee
Q 016111 170 AIRMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEK-PLFQIVSGAQT 246 (395)
Q Consensus 170 aL~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~-~~~~~~~~~~~ 246 (395)
||.+|.++++++. .++||||++|.... . +. ....++||||+|+||++++.-.+... ....... ...
T Consensus 120 AL~~A~~~i~s~~~~~~~aLVV~sDia~y--~-~~-------~~~~t~GaGAvAmLv~~~~~~~~~~~~~~~~~~~-~~D 188 (454)
T TIGR01833 120 ALFNAINWIESSSWDGRYALVVAGDIAVY--A-KG-------NARPTGGAGAVAMLIGPNAPIVFERGLRGSHMQH-AYD 188 (454)
T ss_pred HHHHHHHHHHcCCcCCCeEEEEEeccccc--c-CC-------CeeeccccceEEEEeccCccceecCccceEEEee-ccc
Confidence 9999999999985 69999999999542 1 11 12457899999999998775211000 0111111 011
Q ss_pred ec-CCCcCccceEEecCceEEEeCchhHHHHHHHH-------HHHHHHhhcc----CCCCCCCce-EEEEcCCChHHHHH
Q 016111 247 IL-PGSDSDVAGQFREMGLTVHLSKNVATVVSENI-------EKCLDEAFSP----FGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 247 ~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~-------~~~i~~~L~~----~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
++ |..... +...+| +.-...+.+.+ .+.+..++++ .|+.+ +|+ +++||++..+|...
T Consensus 189 F~rP~~~~~---~p~vdg------~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~k 258 (454)
T TIGR01833 189 FYKPDLASE---YPVVDG------KLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQK 258 (454)
T ss_pred ccCCCCCCc---ccccCC------ccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHH
Confidence 11 221110 000112 11111112221 2223333333 35775 888 99999998777655
Q ss_pred H-HHHc----C-----------------------------------------CCccchhHHHHHHHhcCCCccchHHHHH
Q 016111 314 I-EAKL----G-----------------------------------------LKQQKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 314 i-~~~l----g-----------------------------------------i~~e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
. .+.+ . ...+|+..+...-+++||++++|+++.|
T Consensus 259 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L 338 (454)
T TIGR01833 259 SLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCL 338 (454)
T ss_pred HHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHH
Confidence 3 2222 1 0113343342234699999999999999
Q ss_pred HHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 348 DEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 348 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
..+++... .....| ++|+|+++|+|.......+++.+
T Consensus 339 ~Sll~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~ 375 (454)
T TIGR01833 339 ASLLSSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQ 375 (454)
T ss_pred HHHHhhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeC
Confidence 99998521 113468 99999999999998888888775
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-30 Score=237.48 Aligned_cols=236 Identities=29% Similarity=0.334 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|++++|||.||++++++ +..|+.+.+|+..||+++.+ .++++.+|++++.||.+|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999998 66899999999999997443 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEE
Q 016111 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQF 259 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 259 (395)
|..+++||+++|. ++|||||+|+||++.+.. ..+..+..++.+......+... +
T Consensus 85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~----~-- 139 (254)
T cd00327 85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM----V-- 139 (254)
T ss_pred CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC----C--
Confidence 9999999999988 358999999999986531 0001123344432221111100 0
Q ss_pred ecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh--HHHHHHHhcC
Q 016111 260 REMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS--ATRHVLSEYG 336 (395)
Q Consensus 260 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~--~~~~~~~~~G 336 (395)
+....+.+.++++++|+++|+++ +|+ +|++|+.+..+++.+.+.++++.++.. .......+||
T Consensus 140 -------------~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 205 (254)
T cd00327 140 -------------PAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG 205 (254)
T ss_pred -------------CCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence 00123446678999999999997 999 999999999999999999999877763 0112689999
Q ss_pred CCccchHHHHHHHHHHhhhhcCCcc-------CCCCCceEEEEEEccchhhhheee
Q 016111 337 NMGGVSVFFILDEIRRKSAEEGKVT-------TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 337 n~~sas~~i~L~~~~~~~~~~g~i~-------~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
|++++|.++.|.++++. .+.+ +| ++++++++|.|+++++++|
T Consensus 206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 99999999999999876 3333 66 8999999999999999875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=231.98 Aligned_cols=257 Identities=25% Similarity=0.270 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHhCCC----CCCcCEEEEEecCC-CC---------------------CCCHHHHHHHHcCCCCccc
Q 016111 102 VPKLGEEAATKAIKEWGQS----KSQITHLIFCSLVG-VD---------------------MPGADYQLTKMLGLNPSVK 155 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~----~~~Id~vi~~s~t~-~~---------------------~p~~a~~l~~~Lgl~~~~~ 155 (395)
..+|+++|++++|+++|++ +++||.||++++++ +. .|+.+.+|+..||++..
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~-- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGP-- 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCC--
Confidence 6789999999999999999 99999999998876 43 67889999999999543
Q ss_pred cceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCC----------CCC--CCchhhhhhhhhccccEEEE
Q 016111 156 RVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRG----------PSD--ANLGCLAGQALFGDGAAALI 223 (395)
Q Consensus 156 ~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~----------~~~--~~~~~~~~~~~fGDgAaA~v 223 (395)
++++..+|++++.||.+|..+|++|..+++||+++|..+..+.. |.. ....+...+++|||||+|+|
T Consensus 89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 68899999999999999999999999999999999987642211 000 00112335889999999999
Q ss_pred EecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EE
Q 016111 224 IGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FW 301 (395)
Q Consensus 224 l~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 301 (395)
|++.+.. ..+.....++...+....+.... .+....+.+.++++++|+++|+++ +|| ++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~~~~~~~i~~al~~agl~~-~did~~ 228 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGMG------------------AFAPSAEGLARAAKEALAVAGLTV-WDIDYL 228 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCCC------------------CCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence 9976531 00011223443332211111100 001123456678999999999997 999 99
Q ss_pred EEcCCChHHHHHHHHHcCCCccch---hHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-----------------
Q 016111 302 IVQPGGPAIVNQIEAKLGLKQQKL---SATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT----------------- 361 (395)
Q Consensus 302 i~hq~~~~~~~~i~~~lgi~~e~~---~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~----------------- 361 (395)
++|+.+..+.+.+.++++++.++. .. +.+..+|||+++++.++.|..+++... .+.+-
T Consensus 229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 306 (332)
T cd00825 229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLMLE-HGFIPPSIHIEELDEAGLNIVT 306 (332)
T ss_pred EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHHHh-cCccCCCCCCCCCCcccCcccC
Confidence 999999999888888877765531 11 126899999999999999999987511 12111
Q ss_pred -----CCCCCceEEEEEEccchhhhheee
Q 016111 362 -----TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 -----~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+| ++++++++|.|.++++++|
T Consensus 307 ~~~~~~~---~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 307 ETTPREL---RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence 55 8999999999999999885
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=200.19 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=196.3
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
...+++++...+|.|+. +++.+.+.+.+......+ ++..+++.+|.+++|+.++.+..+.. . ...
T Consensus 5 R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~--~~sl~F~~kIlerSGlG~eTy~P~~~-~----------~~p 71 (290)
T PF08392_consen 5 RPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFD--EESLDFQRKILERSGLGDETYLPPAL-H----------EIP 71 (290)
T ss_pred CCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCC--hhHHHHHHHHHHhcCCCccccCCccc-c----------cCC
Confidence 45589999999999884 899999998875432222 45567788999999999998874432 1 112
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGAT 169 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~ 169 (395)
.+..+..+.+.+..++..|++++|+++|++|+|||.||+.+++++..|+++.+|.+++|++.+.. .+++ ++||++++.
T Consensus 72 ~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~-~~nLsGMGCsAgli 150 (290)
T PF08392_consen 72 PDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK-SYNLSGMGCSAGLI 150 (290)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee-eecccCCcchhhHH
Confidence 23556667777888999999999999999999999999999998999999999999999998874 6666 789999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
+|++|+++++..+..++|||+.|..+..+. .. .++....+.++|+|||+|+||++.+.... +..|++.+.-.++..
T Consensus 151 ai~lA~~lL~~~p~~~ALVVstE~~s~~~Y-~G-~~rsmlv~NcLFr~GgAAvLLSn~~~~~~--~aky~L~~~vRt~~g 226 (290)
T PF08392_consen 151 AIDLAKDLLQAHPNSYALVVSTENISANWY-RG-NDRSMLVSNCLFRMGGAAVLLSNKPSDRR--RAKYELLHTVRTHTG 226 (290)
T ss_pred HHHHHHHHHHhCCCcEEEEEEEeecccccc-cC-CcHHHhhccccccCCceeEEeecCccccc--cchhhhhheeeeecC
Confidence 999999999999999999999999997554 22 24566678999999999999999877421 245666654444444
Q ss_pred CCcCccceE---EecCc-eEEEeCchhHHHHHHHHHHHHHH
Q 016111 250 GSDSDVAGQ---FREMG-LTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 250 ~~~~~~~~~---~~~~g-~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..++.+..- ..++| .-+.++|++...+.+.+...|..
T Consensus 227 ~~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~ 267 (290)
T PF08392_consen 227 ADDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITT 267 (290)
T ss_pred CCCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHH
Confidence 444433321 12234 24567899998888777666554
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-24 Score=180.66 Aligned_cols=150 Identities=41% Similarity=0.821 Sum_probs=126.6
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCChHHHHHHHHHc
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKL 318 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~~~~~~~i~~~l 318 (395)
++.+..+.++|++++.+.|.+.+.|+.+.+.++++..+.+.++.+++++|++.|++.+++.+|++|+++++|++.+.+.|
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L 80 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEAL 80 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHc
Confidence 45667778899999999999999999999999999999999999999999999998634449999999999999999999
Q ss_pred CCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 319 GLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 319 gi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+++++++..+|+++++|||++|+++++.|++++++..++|....|++.+++++++||+|+|..+++||.-
T Consensus 81 ~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 81 GLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp TS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999999988433345555544458999999999999999999964
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=194.89 Aligned_cols=316 Identities=13% Similarity=0.087 Sum_probs=212.2
Q ss_pred CCeEEEeeeeeCCCcc------------cccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCC
Q 016111 15 GLATILAIGTANPPNC------------IYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPN 82 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~ 82 (395)
.+++|.++|..-|=.. ++|.+....+ .... -+||..++++.+|++.. .+
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~---~~~~--------~~~i~~~~~~~~~~~~~-~~------- 63 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFI---DPPG--------GEWLIGAPVPLPPPWRG-PE------- 63 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccccc---cCCC--------CCceEeecCcCCcccCc-hH-------
Confidence 3588999988877543 3444333221 1110 15777788888888753 23
Q ss_pred CcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCCCcCEEEEEec-----CC-CCCCCHHHHHHHHcCCCCccc
Q 016111 83 ICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWG-QSKSQITHLIFCSL-----VG-VDMPGADYQLTKMLGLNPSVK 155 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag-~~~~~Id~vi~~s~-----t~-~~~p~~a~~l~~~Lgl~~~~~ 155 (395)
...+|+.+|++++|++++ +++++||++|..+. .+ ...+..+..++++||+....
T Consensus 64 ------------------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~- 124 (348)
T PRK06147 64 ------------------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEP- 124 (348)
T ss_pred ------------------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCC-
Confidence 278999999999999999 79999999998654 12 34456788999999995433
Q ss_pred cceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----cCCCCCCCchhhhhhhhhccccEEEEEecCCCC
Q 016111 156 RVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----FRGPSDANLGCLAGQALFGDGAAALIIGANPDT 230 (395)
Q Consensus 156 ~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~ 230 (395)
+.+++..+|++++.||..|..+|++|.++.+||+++|..+.. |.........+...+++|||||+++||++.+..
T Consensus 125 ~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A 204 (348)
T PRK06147 125 GSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGG 204 (348)
T ss_pred CcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhh
Confidence 378999999999999999999999999999999999987641 100000000122358999999999999986542
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
.- ....++..+....+.... ...+.. ...+.+.++++++|+++|+++ +|| ++..|..+..
T Consensus 205 ~~---rga~i~a~g~~~~~~~~~------------~~~~~p---~~g~gl~~ai~~AL~~agl~~-~dId~v~ah~~gt~ 265 (348)
T PRK06147 205 EA---PGLPLLGLGLGREPAPVG------------ESEDLP---LRGDGLTQAIRAALAEAGCGL-EDMDYRIADLNGEQ 265 (348)
T ss_pred hc---CCCceEEEEEeecCCCcc------------cCCCCC---CChHHHHHHHHHHHHHcCCCH-HHCCEEEcCCCCCc
Confidence 10 012222211111111000 000000 012456689999999999997 999 8899986554
Q ss_pred HH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhhee
Q 016111 310 IV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVV 384 (395)
Q Consensus 310 ~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~l 384 (395)
.. ..+.+.++-..+..+. +.+-..+||+++|+-++.|...+.. .++| .-+| +++|+++.......++++
T Consensus 266 ~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~~~g-~~~g---~~~L~~s~~d~g~r~a~~ 339 (348)
T PRK06147 266 YRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-SRKG-YGPG---PNVLCHLSDDDGARAALV 339 (348)
T ss_pred cchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-HHcC-cCCC---CcEEEEecCCCCceEEEE
Confidence 42 2234445533222222 1257889999999999999876553 1124 5668 899999999999999999
Q ss_pred eeecCCCCC
Q 016111 385 LRSFPFPTV 393 (395)
Q Consensus 385 l~~~~~~~~ 393 (395)
|+.++.|.+
T Consensus 340 l~~~~~~~~ 348 (348)
T PRK06147 340 LEYRRGPAR 348 (348)
T ss_pred EeccccCCC
Confidence 999988753
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-21 Score=153.56 Aligned_cols=89 Identities=26% Similarity=0.536 Sum_probs=77.8
Q ss_pred hccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCC
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGL 366 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~ 366 (395)
|+++|+++ +|| +|++||.|.++++.+++.+|+++++++. ++++|||+++||+|++|++++++ |++++|
T Consensus 1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~---~~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G--- 69 (90)
T PF08541_consen 1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPD---NLAEYGNTGSASIPINLADALEE----GRIKPG--- 69 (90)
T ss_dssp HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE----THHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHH---HHhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence 57899997 999 9999999999999999999999999887 48999999999999999999998 899999
Q ss_pred ceEEEEEEccchhhhheeeee
Q 016111 367 EWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 367 d~vll~~~G~G~s~~a~ll~~ 387 (395)
|+|+++++|+|++|+++++||
T Consensus 70 d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEEETTTEEEEEEEE-
T ss_pred CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999998
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=168.92 Aligned_cols=244 Identities=15% Similarity=0.179 Sum_probs=162.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+..+|+.+|+++||+++|++++|||+||+++. +. .+..+..+++.||++ .++++.+|++++.||.+|..+|++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP-----~fdV~~ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIP-----FLGLYGACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCC-----EEEEeccCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999998873 32 345689999999972 589999999999999999999999
Q ss_pred CCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccce
Q 016111 181 NPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAG 257 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 257 (395)
|.+++|||++++..+. .|+.|.+.--+++.+..+|||||+|+||++.+.. +...-.+.+.. +++
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~-----~~i~~~t~gkv--------~d~ 188 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGG-----PRITSATIGKV--------VDY 188 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCC-----CceEEEEEEEE--------Eec
Confidence 9999999999999882 2333422111345578999999999999987543 12222222211 111
Q ss_pred EEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH--H
Q 016111 258 QFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH--V 331 (395)
Q Consensus 258 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~--~ 331 (395)
.+.+ -+.||.-... ...+.|.+.|++.|.++ +|. .++.- ..+.++++.+.++-|++.++.+...- +
T Consensus 189 g~~d---~~nmgaamap----aa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~i 260 (327)
T TIGR02845 189 GITD---PLDMGAAMAP----AAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMI 260 (327)
T ss_pred CCCC---cccchhhhhH----HHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEE
Confidence 1111 1344433222 23356778899999997 888 55433 46778888888888876644221100 0
Q ss_pred ---H--HhcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 332 ---L--SEYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 332 ---~--~~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
- -.-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 261 y~~~~~~~aggsgc~csa~v~~~~~~~~------~~~g~-~~r~l~v~tgalls 307 (327)
T TIGR02845 261 YRPDQQVFAGGSGCACSAVVTYGHILKE------MLRGK-LKKVLVVATGALLS 307 (327)
T ss_pred EcCCCcccCCCcccchhHHHHHHHHHHH------HhcCc-ceEEEEEEchhhcC
Confidence 0 0123344444444444 44544 33332 25899999997444
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-20 Score=157.60 Aligned_cols=166 Identities=22% Similarity=0.297 Sum_probs=129.3
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+|+|.+++.|+|+.+++.+++++.- +.+. .++....|.++..+..+.|+
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~~---g~d~---------~K~~~glgq~~~av~~~~ED------------------ 52 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEAR---GVDP---------GKYTIGLGQEKMAVPPPDED------------------ 52 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHHT---TS-T---------CHHHTTT--SEEEE--TTS-------------------
T ss_pred ccccEeEEEEecCceEecHHHHHHHh---CCCH---------HHhhhhcCeeEEEeCCCccc------------------
Confidence 47999999999999999999998762 2221 45666788888888888774
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC--CccccceecCccchhHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLN--PSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~--~~~~~~~~i~~~C~~~~~aL 171 (395)
+..||+.|++++|++.++++++|+.|+++|.|. +...+.+.+|++.||+. ..+ +.+++.++|.|+..||
T Consensus 53 -------~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~-~~~e~k~ACygGTaAL 124 (174)
T PF01154_consen 53 -------IVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDC-RGVEMKQACYGGTAAL 124 (174)
T ss_dssp -------HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSS-EEEEEESGGGHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCce-eeeehhhhhHHHHHHH
Confidence 899999999999999999999999999999999 88889999999999994 333 4789999999999999
Q ss_pred HHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC
Q 016111 172 RMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 172 ~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
+.|..++.++. .+++|||++|..... +.. ....-|-||+|+||+++.
T Consensus 125 ~~a~~~v~s~~~~g~~aLVVasDiA~y~---~g~-------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 125 QNAVNWVASSPWDGRKALVVASDIARYD---LGS-------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HHHHHHHCSTTSTTEEEEEEEEEEE--S---TTT-------TGGG-EEEEEEEEEECS-
T ss_pred HHHHHHHhcCCCCCCeEEEEeccccccC---CCC-------ccccccceeEEEEecCCC
Confidence 99999999984 679999999998741 211 145689999999999864
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-19 Score=165.87 Aligned_cols=244 Identities=15% Similarity=0.172 Sum_probs=165.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+..+|+.+|+++||+++|++++|||++|+++...+ +..+..+++.||+ + +++++.+|+++..||.+|..++++
T Consensus 55 AeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~S 127 (337)
T PRK08304 55 AERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDG 127 (337)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999875323 3578899999997 2 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc---cCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccce
Q 016111 181 NPGARVLVVCSDLSLGT---FRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAG 257 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~---~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 257 (395)
|.+++|||++++..+.. |+.|.+.--+.+.+..+++|||+|+||++.... +...-.+.+.. +++
T Consensus 128 G~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~-----~~i~~~t~Gkv--------~D~ 194 (337)
T PRK08304 128 GFADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSG-----PRITHATIGKV--------VDL 194 (337)
T ss_pred CCCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCC-----ceEEEEeEEEE--------Eec
Confidence 99999999999998753 665644322344568899999999999986542 22222222211 111
Q ss_pred EEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH--H
Q 016111 258 QFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH--V 331 (395)
Q Consensus 258 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~--~ 331 (395)
.+.+ -+.||.-.. ....+.|.+.|++.|.++ +|. .++.- ..+..+++.+.++-|++.++.+...- +
T Consensus 195 g~~d---~~nmgaaMa----pAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~i 266 (337)
T PRK08304 195 GIKD---PNDMGAAMA----PAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMI 266 (337)
T ss_pred CCCC---cccchhhhh----HHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEE
Confidence 1111 134443322 223356778899999997 888 55433 46778898888888887653322100 0
Q ss_pred H----H--hcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 332 L----S--EYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 332 ~----~--~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
+ + .-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 267 y~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g~-~~rvl~v~tGaLls 314 (337)
T PRK08304 267 YDSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKGK-LKRVLVVATGALLS 314 (337)
T ss_pred eccCCCcccCCCcccchhHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcC
Confidence 1 0 124444444444444 44543 33332 25899999997443
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=157.71 Aligned_cols=257 Identities=16% Similarity=0.171 Sum_probs=168.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC-C--------------------------CCCCHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG-V--------------------------DMPGADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~-~--------------------------~~p~~a~~l~~~Lg 149 (395)
....|+.+|+++||+++|++++++|. |+++++.+ + ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46789999999999999999877663 55555432 1 22456789999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc---------------------cCCCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT---------------------FRGPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~---------------------~~~~~~~~~~~ 208 (395)
++.. .+.+..+|++++.||..|..+|++|.++++||+++|..+.. ...|.+ .
T Consensus 150 l~g~---~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~----~ 222 (406)
T cd00834 150 LRGP---NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFD----K 222 (406)
T ss_pred CCCc---ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCC----C
Confidence 9753 68899999999999999999999999999999999987610 011222 1
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHh
Q 016111 209 LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEA 287 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 287 (395)
...++++||||+|+||++.+.. ..+......+.+.+...... . . ..+ .. ....+.++++++
T Consensus 223 ~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~-~---~~~-------~~-----~~~~~~~~i~~a 284 (406)
T cd00834 223 DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAY--H-I---TAP-------DP-----DGEGAARAMRAA 284 (406)
T ss_pred CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCC--C-C---CCC-------CC-----CcHHHHHHHHHH
Confidence 2347899999999999985432 10011123343332111000 0 0 000 00 123455788999
Q ss_pred hccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
|+++|+++ +|| ++.+|..+... .+.+.+.++-..++++.+ ..-..+||+.+|+-++.|..++.. .+++.+.
T Consensus 285 l~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip 361 (406)
T cd00834 285 LADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDGVLP 361 (406)
T ss_pred HHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcCCcC
Confidence 99999997 999 99999876543 334555565533344432 245778999999988888766532 1113221
Q ss_pred CC-----------------C----CCceEEEEEEccchhhhheee
Q 016111 362 TG-----------------E----GLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 ~G-----------------~----~~d~vll~~~G~G~s~~a~ll 385 (395)
+= + +..+++..+||.|.+-.+++|
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 362 PTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 10 0 014677888998877776664
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-16 Score=153.10 Aligned_cols=252 Identities=16% Similarity=0.153 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNP-SVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~-~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +..|..+..++..||++. .+ +++++++|++++.+|.+|.++|
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I 98 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSI 98 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999988776 556777888999999985 43 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccccc-----------CC--------CCCC-C---------------------ch----------
Q 016111 179 ENNPGARVLVVCSDLSLGTF-----------RG--------PSDA-N---------------------LG---------- 207 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~~-----------~~--------~~~~-~---------------------~~---------- 207 (395)
++|.+++|||+++|++|..- .+ |... . ++
T Consensus 99 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~ 178 (386)
T cd00751 99 AAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178 (386)
T ss_pred HCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999875310 00 0000 0 00
Q ss_pred -----hh-----------------------------------------------------hhhhhhccccEEEEEecCCC
Q 016111 208 -----CL-----------------------------------------------------AGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 208 -----~~-----------------------------------------------------~~~~~fGDgAaA~vl~~~~~ 229 (395)
++ .....++|||+|+||.+.+.
T Consensus 179 ~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~ 258 (386)
T cd00751 179 QRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEK 258 (386)
T ss_pred HHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHH
Confidence 00 00112246666666665432
Q ss_pred C-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC
Q 016111 230 T-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG 307 (395)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~ 307 (395)
. ..+..+...+...+... + +... .......+++++++++|+++ +|| ++-+|-..
T Consensus 259 a~~~~~~~~~~I~g~~~~~--------------~------~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f 314 (386)
T cd00751 259 AKELGLKPLARIVGYAVAG--------------V------DPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAF 314 (386)
T ss_pred HHHCCCCeeEEEEEEEEcc--------------C------CCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechh
Confidence 1 00001112233222110 0 0000 01122468889999999997 999 88888776
Q ss_pred hHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 308 ~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
........+.||+....+..+ --.-.+||...++-...+.++..+.. |+ .+ .+.|....|+|..-++++++
T Consensus 315 ~~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 315 AAQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HHHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 655556678899876444432 13446899999998888888777521 21 22 56666666677666677775
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=153.52 Aligned_cols=262 Identities=14% Similarity=0.139 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CC-------------------CCCHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VD-------------------MPGADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~-------------------~p~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+|+++||+++|+++++|| .|++++.++ |. .+..+.+++..||+...
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~--- 162 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP--- 162 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCC---
Confidence 4567999999999999999999999 888887654 21 34567889999999763
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCCC--CchhhhhhhhhccccEEEEE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPSDA--NLGCLAGQALFGDGAAALII 224 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~~--~~~~~~~~~~fGDgAaA~vl 224 (395)
++.+..+|++++.||.+|..+|++|..+.+||+++|..... +..++.. ..+....++++||||+|+||
T Consensus 163 ~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVL 242 (424)
T smart00825 163 SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVL 242 (424)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEE
Confidence 68899999999999999999999999999999999974320 1111100 01112347899999999999
Q ss_pred ecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE
Q 016111 225 GANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI 302 (395)
Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 302 (395)
++.+.. ..+.....++...+......... .. .+ ....+..+++++|+++|+++ +|| ++.
T Consensus 243 e~~e~A~~~g~~i~a~I~g~~~~~~~~~~~-----~~--------~~-----~~~~~~~a~~~al~~Agl~~-~dId~i~ 303 (424)
T smart00825 243 KRLSDALRDGDPILAVIRGSAVNQDGRSNG-----LT--------AP-----SGPAQARLIRQALARAGVDP-ADVDYVE 303 (424)
T ss_pred ccHHHHHHCCCeEEEEEEEEEEeCCCCCCC-----CC--------Cc-----CHHHHHHHHHHHHHHhCCCH-HHccEEE
Confidence 975431 10011123344332211100000 00 00 01234568899999999997 999 888
Q ss_pred EcCCChH-----HHHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-------------
Q 016111 303 VQPGGPA-----IVNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT------------- 361 (395)
Q Consensus 303 ~hq~~~~-----~~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~------------- 361 (395)
+|-.+.. -.+.+.+.++... .+++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 304 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~~~~~~~~~ 381 (424)
T smart00825 304 AHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLA-LRHGTIPPTLHFETPNPHID 381 (424)
T ss_pred eeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHH-HhCCCCCCCCCCCCCCCCCC
Confidence 9954432 2345566665421 223222 134557999999988888665421 0112110
Q ss_pred -------------C---CCCCceEEEEEEccchhhhheeee
Q 016111 362 -------------T---GEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 362 -------------~---G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+ +...+.++..+||-|...++++|+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 382 LEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred cccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 0 001267888999988888888876
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=151.27 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++++|+++|+++++||.||++++++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~-p~~~V~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSV-PAMTLNKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceEEecccchhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876 45667788899999998632 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999997764
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=139.06 Aligned_cols=247 Identities=17% Similarity=0.189 Sum_probs=161.2
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
|++...+|+.+|+++||+++|++++|||+++.++.+....|+ ..+++.||++ .+.+.++|+++..||.+|..+
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~ 122 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALI 122 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999887545554 5999999954 578999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 178 AENNPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
+++|.+++||++++-.+.. .|+.|.+.--+.+.+...---||+|+||++.... +...-.+.+..
T Consensus 123 VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~-----~~i~~~T~Gkv-------- 189 (334)
T PRK12404 123 VNSGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDG-----PRVTSATIGRV-------- 189 (334)
T ss_pred HHcCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCC-----ceEEEEEEEEE--------
Confidence 9999999999999988652 3555654322223345556679999999986432 22222222211
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCc-cchhHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQ-QKLSATR 329 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~-e~~~~~~ 329 (395)
+++.+.+ -+.||.-... ...+.|.+.|++.|.++ +|. .++-- ..+.++++.+.++-|++. ++.+...
T Consensus 190 ~D~g~~d---~~nMGaaMAP----AA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DC 261 (334)
T PRK12404 190 VDMGLTD---PFNMGGAMAP----AAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDC 261 (334)
T ss_pred EecCCCC---cccchhhhhH----HHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCccccccc
Confidence 1111111 1344433222 23356778899999997 888 55433 467788888888877765 3221100
Q ss_pred H--HH---H--hcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 330 H--VL---S--EYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 330 ~--~~---~--~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
- ++ + .-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 262 G~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~------~~~g~-~~rvL~v~TGALlS 312 (334)
T PRK12404 262 GLLIYREGQPVIAGASGPGCSATVTYGHLLNR------MKRGE-LKRILVVATGALLS 312 (334)
T ss_pred CeEEecCCCcccCCCcccchHHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcC
Confidence 0 00 1 123444444444444 44544 33332 25899999997443
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-15 Score=147.66 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +.. +..+..+...+|++... ++++++.+|++++.|+.+|.++|
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET-PAFNVNRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC-ceEEecccchHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999887 433 34566677778997432 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.|||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999998874
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=149.14 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||+++.++ +..|..+..++..+|++... ++++++.+|++++.+|..|.++|+
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESV-PAYTVNRQCASGLQAVILAAQLIR 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCc-eeeeecchhhHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999988776 54577788999999998522 278999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.+++|||+++|+++.
T Consensus 99 sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 99 AGEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998653
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6e-15 Score=145.87 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPG-ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~-~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|++++|+++|+++++||.||++++++ ...|+ .+..++..+|++... ++++++.+|+|++.||.+|.++|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~-p~~~V~~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV-PGMTVNRFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999887 54454 888999999998543 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=144.35 Aligned_cols=252 Identities=17% Similarity=0.167 Sum_probs=167.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C--CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V--DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~--~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++|+++++||.||++++++ . ..|..+..++..||++..+ ++.++.+|++++.+|..|..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988766 3 2467789999999998544 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccccc----------------CCCCCCCc-----------------------------------
Q 016111 178 AENNPGARVLVVCSDLSLGTF----------------RGPSDANL----------------------------------- 206 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~~----------------~~~~~~~~----------------------------------- 206 (395)
|++|.+++|||+++|.++... ..|.....
T Consensus 99 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~ 178 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK 178 (389)
T ss_pred HHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999765310 00100000
Q ss_pred ------------------------hhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEec
Q 016111 207 ------------------------GCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFRE 261 (395)
Q Consensus 207 ------------------------~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 261 (395)
-.......++|||+|+||++.+.. ..+. ....+.+.+....+.. +..
T Consensus 179 np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~-~~v~I~g~g~~~~~~~-------~~~ 250 (389)
T PRK06064 179 NPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTD-TPVWIKASGQASDTIA-------LHD 250 (389)
T ss_pred CcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcC-CCeEEEEEEEecCccc-------ccc
Confidence 000112256999999999975431 1101 1234554432211100 000
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------c
Q 016111 262 MGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------K 324 (395)
Q Consensus 262 ~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~ 324 (395)
.+.+. .......+++++|+++|+++ +|| ++-+|-......-...+.||+.+. +
T Consensus 251 -------~~~~~--~~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~ 320 (389)
T PRK06064 251 -------RKDFT--TLDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGD 320 (389)
T ss_pred -------ccccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCC
Confidence 00000 01123467889999999997 999 888998877776677889998542 2
Q ss_pred hhHHH-HHHHhcCCCccchHHHHHHHHHHhhhhcCCc------cCCCCCceEEEEEEcc
Q 016111 325 LSATR-HVLSEYGNMGGVSVFFILDEIRRKSAEEGKV------TTGEGLEWGVMFGIGA 376 (395)
Q Consensus 325 ~~~~~-~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i------~~G~~~d~vll~~~G~ 376 (395)
++.|. --.-.+||...++-...+.++..+.. |+- -+| .++.+..++|.
T Consensus 321 ~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~--g~a~~g~rqv~~--a~~~l~~~~g~ 375 (389)
T PRK06064 321 IPVNPSGGLKAKGHPVGATGVSQAVEIVWQLR--GEAEKGRQQVIG--AGYGLTHNVGG 375 (389)
T ss_pred eeecCCCCcccCCCCcchhHHHHHHHHHHHHh--CCCCCCCccCCC--ccEEEEecCCC
Confidence 22220 00224899999988888888766522 221 123 26777777774
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=141.79 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.||+++.++ ... +..+......+|++... ++++++.+|+|++.||.+|.++|
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~-pa~~Vn~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETV-PGVQINRFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCC-CeEEEcchhhhHHHHHHHHHHHH
Confidence 3889999999999999999999999999999987 333 34566677888996543 48999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|++++|++|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999885
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=141.75 Aligned_cols=254 Identities=18% Similarity=0.141 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..+|++... ++++++.+|++++.||..|.++|+
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~v~~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEV-PALTINKVCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCC-ceeeecccchHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988766 33444556677788987422 278999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccccC-----------------C------CCCC---C----------------ch----------
Q 016111 180 NNPGARVLVVCSDLSLGTFR-----------------G------PSDA---N----------------LG---------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~~-----------------~------~~~~---~----------------~~---------- 207 (395)
+|.+++|||+++|.+|.... + +.+. . ++
T Consensus 104 sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~ 183 (393)
T PRK05790 104 AGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQ 183 (393)
T ss_pred cCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999998642100 0 0000 0 00
Q ss_pred ----h-hh------------------------------------------------------hhhhhccccEEEEEecCC
Q 016111 208 ----C-LA------------------------------------------------------GQALFGDGAAALIIGANP 228 (395)
Q Consensus 208 ----~-~~------------------------------------------------------~~~~fGDgAaA~vl~~~~ 228 (395)
. +. ....++|||+|+||++.+
T Consensus 184 ~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e 263 (393)
T PRK05790 184 QKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEA 263 (393)
T ss_pred HHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHH
Confidence 0 00 122446777777777643
Q ss_pred CC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCC
Q 016111 229 DT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPG 306 (395)
Q Consensus 229 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~ 306 (395)
.. ..+..+..++.+.+..... .... ......+++++++++|+++ +|| ++-+|-.
T Consensus 264 ~a~~~~~~~~~~I~g~~~~~~~--------------------~~~~---~~~~~~a~~~a~~~Agi~~-~did~~e~~d~ 319 (393)
T PRK05790 264 KAKELGLTPLARIVSYAVAGVD--------------------PAIM---GIGPVPAIRKALEKAGWSL-ADLDLIEINEA 319 (393)
T ss_pred HHHHCCCCeeEEEEEEEEccCC--------------------CCcc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCcH
Confidence 21 0001111234333221000 0000 0112357889999999997 999 7777776
Q ss_pred ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 307 GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 307 ~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
-....-...+.||+...++..+ --.-.+||..+|+-...+.++.++.. + +.+ .+.|....|+|..-++++|+
T Consensus 320 f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~--~--~~~---~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 320 FAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMK--R--RGA---KKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred HHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEEE
Confidence 5444555678899876665443 24566899999999998888887621 1 122 46677777777777778877
Q ss_pred e
Q 016111 387 S 387 (395)
Q Consensus 387 ~ 387 (395)
.
T Consensus 392 ~ 392 (393)
T PRK05790 392 R 392 (393)
T ss_pred c
Confidence 5
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=134.58 Aligned_cols=309 Identities=17% Similarity=0.183 Sum_probs=193.8
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++..|+|.+.|++++++..- +.+. .++---.|..+--|+.+.|
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d---~vs~---------gKytIGLGq~~MgfcsdrE-------------------- 58 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFD---GVSA---------GKYTIGLGQTQMGFCSDRE-------------------- 58 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcC---Cccc---------cceEeccCcceecccCchh--------------------
Confidence 8999999999999999999997652 2121 1222123333333554444
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcC--CCCccccceecCccchhHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLG--LNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lg--l~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
....|+..+..+++++-+++++.|+-|-++|.|- .-..+.-..|.+.++ -..+.. -.|..++|.|+..||-
T Consensus 59 -----Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGGtaALf 132 (462)
T KOG1393|consen 59 -----DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGGTAALF 132 (462)
T ss_pred -----hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-cccccccccccHHHHH
Confidence 2778999999999999999999999999999986 555566666776666 343443 6788999999999999
Q ss_pred HHHHHHHcC--CCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeee--eee-
Q 016111 173 MAKDFAENN--PGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGA--QTI- 247 (395)
Q Consensus 173 ~A~~ll~~g--~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~--~~~- 247 (395)
.|-.++.+. ..+.+|||++|..-.. ..+ ....=|-||.|++|+++..-.+ + ..++..+.. ..+
T Consensus 133 navnWiESssWDGr~aivV~gDIAvY~-~G~---------aRpTGGAgAVAmLIgPnApi~f-e-rglr~thM~hayDFy 200 (462)
T KOG1393|consen 133 NAVNWIESSSWDGRYAIVVCGDIAVYA-KGN---------ARPTGGAGAVAMLIGPNAPIIF-E-RGLRATHMQHAYDFY 200 (462)
T ss_pred HHhhhhhhcccCCceeEEEEeeEEEec-CCC---------CCCCCCcceEEEEEcCCCceEe-c-ccchhhhhhhhhhcc
Confidence 999999987 4889999999997631 111 1234589999999999765211 0 011110000 001
Q ss_pred cCCCcCccceEEecCceEEEeCchhHHHHHHHH--------HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-HHH-
Q 016111 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENI--------EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-IEA- 316 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~--------~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-i~~- 316 (395)
-|.-.. .+.-.+| +.-...+...+ .++.++-.+.-+... ++. ++++|.+--++.+. +++
T Consensus 201 KPdl~S---EyPvVDG------klSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqKs~arl 270 (462)
T KOG1393|consen 201 KPDLLS---EYPVVDG------KLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQKSLARL 270 (462)
T ss_pred CCCCCC---cCceecC------eehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHHHHHHh
Confidence 121100 0011122 22222222222 222233333334453 677 88999876655443 111
Q ss_pred ----------------------------------------HcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 317 ----------------------------------------KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 317 ----------------------------------------~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
...+-.+|+-.+...-.+.||++++|+...|..++.....
T Consensus 271 ~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~ 350 (462)
T KOG1393|consen 271 LYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPA 350 (462)
T ss_pred hhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccch
Confidence 0111112222221112478999999999999999886211
Q ss_pred cCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 357 EGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 357 ~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.--.| .+|.+.++|+|++.+..-+|+.+
T Consensus 351 --d~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 351 --DELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred --hhhhc---cEEEEEeecCcchhheEEEEecC
Confidence 11246 79999999999999888888875
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-14 Score=139.87 Aligned_cols=232 Identities=17% Similarity=0.105 Sum_probs=160.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|+++++.+ ...+..+..++..||++..+ ++.++.+|++++.+|..|.++|+
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988766 44577889999999997543 78899999999999999999999
Q ss_pred cCCCCeEEEEEeecccccc-----C----C-------CCC-CCch-----------------------------------
Q 016111 180 NNPGARVLVVCSDLSLGTF-----R----G-------PSD-ANLG----------------------------------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~-----~----~-------~~~-~~~~----------------------------------- 207 (395)
+|.++.|||+++|.++... . + +.. ....
T Consensus 93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n 172 (375)
T cd00829 93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN 172 (375)
T ss_pred hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999876420 0 0 000 0000
Q ss_pred ------------------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 208 ------------------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 208 ------------------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
.......++|||+|+||.+.+.. .. ..+...+.+.+....+... +. .+
T Consensus 173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~----~~--~~ 245 (375)
T cd00829 173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSL----SE--RD 245 (375)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccc----cc--cc
Confidence 00012346999999999976431 11 1123444443322111000 00 00
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc--c----------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ--Q---------------- 323 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~--e---------------- 323 (395)
.+ ........+++++|+++|+++ +|| ++=+|-......-...+.||+.+ +
T Consensus 246 --------~~--~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~ 314 (375)
T cd00829 246 --------DF--LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDL 314 (375)
T ss_pred --------cc--cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCc
Confidence 00 012233468899999999997 999 88899888788888889999976 3
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ --+-.+||...++-...+.++.++
T Consensus 315 pvN~~-GG~la~Ghp~gatG~~~~~e~~~q 343 (375)
T cd00829 315 PVNTS-GGLLSKGHPLGATGLAQAVEAVRQ 343 (375)
T ss_pred cccCC-CchhcCCCCccHHHHHHHHHHHHH
Confidence 22221 123347999999888887777664
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=141.58 Aligned_cols=95 Identities=16% Similarity=0.056 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC-CCCCCHHHH-HHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG-VDMPGADYQ-LTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~-~~~p~~a~~-l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++ |++++|||.||++++++ ...+....+ +...+|++... ++++++.+|++++.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSV-GGVTVNRFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHH
Confidence 37899999999999997 99999999999998887 444555555 45556998533 3899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.|||+++|++|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998874
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-14 Score=141.82 Aligned_cols=258 Identities=16% Similarity=0.163 Sum_probs=165.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC----------------------CC----CC-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG----------------------VD----MP-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~----------------------~~----~p-~~a~~l~~~Lg 149 (395)
....|+.+|++++|+++|++++++|. |++++..+ +. .+ ..+.++...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 35789999999999999999988885 66665321 00 11 24568999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F----------RGPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~~~ 208 (395)
+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + ..|.+ .
T Consensus 150 l~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd----~ 222 (407)
T TIGR03150 150 AKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFD----K 222 (407)
T ss_pred CCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCc----C
Confidence 9754 67889999999999999999999999999999999973210 0 01111 1
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHh
Q 016111 209 LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEA 287 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 287 (395)
...++++||||+|+||++.+.. ..+.....++.+.+....... .. .+. . ......++++++
T Consensus 223 ~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~---~~~-------~-----~~~~~~~ai~~A 284 (407)
T TIGR03150 223 DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYH---IT---APA-------P-----EGEGAARAMRAA 284 (407)
T ss_pred CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCC---CC---CCC-------C-----CcHHHHHHHHHH
Confidence 1246889999999999976531 100111233433322110000 00 000 0 012344788899
Q ss_pred hccCCCCCCCce-EEEEcCCCh-----HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGP-----AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~-----~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
|+++|+++ +|| ++..|-.+. .-...+.+.++-...+++.+ ..-..+||+.+|+-.+.|...+.. .+++.+-
T Consensus 285 l~~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~-l~~~~ip 361 (407)
T TIGR03150 285 LKDAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLA-IRDGVVP 361 (407)
T ss_pred HHHcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHH-HhcCCcC
Confidence 99999997 999 888997665 33455667777543344432 134567999988887777665432 1112111
Q ss_pred C--------------------CC-CCceEEEEEEccchhhhheeee
Q 016111 362 T--------------------GE-GLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 362 ~--------------------G~-~~d~vll~~~G~G~s~~a~ll~ 386 (395)
| +. +..+++..+||.|.+-.+++|+
T Consensus 362 p~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 362 PTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 1 10 1146788889988888777764
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.2e-14 Score=137.97 Aligned_cols=233 Identities=15% Similarity=0.044 Sum_probs=157.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..||++..+ .++++.+|++++.||..|..+|+
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988776 22234478899999998765 68999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccc----------------cC-CCCC---C-----------------------------------
Q 016111 180 NNPGARVLVVCSDLSLGT----------------FR-GPSD---A----------------------------------- 204 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~----------------~~-~~~~---~----------------------------------- 204 (395)
+|.+++|||+++|.+|.. +. .|.. .
T Consensus 98 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~n 177 (385)
T PRK12578 98 SGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMN 177 (385)
T ss_pred CCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999986521 00 0000 0
Q ss_pred ---------------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 205 ---------------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 205 ---------------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
++-.......++|||+|+||.+++.. ..+..+...+.+.+....+.. +...
T Consensus 178 p~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~-----~~~~-- 250 (385)
T PRK12578 178 PKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY-----VARR-- 250 (385)
T ss_pred ChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc-----cccc--
Confidence 00011223456799999999875421 110012344544432211110 0000
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------------------ 323 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------------------ 323 (395)
+++.. ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+.
T Consensus 251 -------~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~ 320 (385)
T PRK12578 251 -------GEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKV 320 (385)
T ss_pred -------ccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 01110 1123467889999999997 999 888998887777777889998652
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ -=+-.+||...++-...+.++..+
T Consensus 321 pvN~~-GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 321 GVNLF-GGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred eeCCC-CCcccCCCCccHHHHHHHHHHHHH
Confidence 22211 113447999988888888887665
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.9e-14 Score=141.13 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++.++ ...+..+..++..+|++... ++++++.+|++++.||..|.++|+
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEV-QTETVNKVCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999998876 22445566789999997433 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.|||+++|++|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-14 Score=140.84 Aligned_cols=256 Identities=14% Similarity=0.118 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC-cC----EEEEEecCC-----------------------CCC--CCHHHHHHHHcCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQ-IT----HLIFCSLVG-----------------------VDM--PGADYQLTKMLGL 150 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~-Id----~vi~~s~t~-----------------------~~~--p~~a~~l~~~Lgl 150 (395)
....|+..|+++||+++|+++++ ++ .+++++..+ ... ...+.+|+..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 36789999999999999998766 43 455555421 111 4567899999999
Q ss_pred -CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------c----------cCCCCCCCchhh
Q 016111 151 -NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------T----------FRGPSDANLGCL 209 (395)
Q Consensus 151 -~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~----------~~~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|..+.+||+++|..+. . ...|.+ ..
T Consensus 151 ~~Gp---~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd----~~ 223 (407)
T cd00828 151 SHGP---IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFD----ET 223 (407)
T ss_pred CCCC---CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCc----CC
Confidence 653 6889999999999999999999999999999999998651 0 011222 12
Q ss_pred hhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+... .+....-++...+....... .. ... -.+.+.++++++|
T Consensus 224 ~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--------------~~-~~~----~~~~~~~a~~~Al 284 (407)
T cd00828 224 RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAG--------------RS-VPA----GGKGIARAIRTAL 284 (407)
T ss_pred CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCC--------------CC-CCC----ChHHHHHHHHHHH
Confidence 3589999999999999864311 00111223333221111000 00 000 1234567899999
Q ss_pred ccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+++ +|| ++..|-.+... .+.+.+.++-..+.++.+ .+-..+||+.+|+-++.|...+.. .+++.+.|
T Consensus 285 ~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~ipp 361 (407)
T cd00828 285 AKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLIPP 361 (407)
T ss_pred HHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCccCC
Confidence 9999997 999 88999655433 233444454321222221 146889999999999888765432 11132211
Q ss_pred C-----------------C----C--CceEEEEEEccchhhhheee
Q 016111 363 G-----------------E----G--LEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 363 G-----------------~----~--~d~vll~~~G~G~s~~a~ll 385 (395)
= . + ..+++..+||.|.+-+++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 362 TANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 0 0 0 14678888998887777664
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=136.17 Aligned_cols=256 Identities=18% Similarity=0.191 Sum_probs=162.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD--MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~--~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|+++||+++|++++|||.|++++ ++ +. .+..+..+++.||+.+.+ +++++.+|+++..++..|.++
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~ 99 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASL 99 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999887 34 21 122347899999998764 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-----------cC------------------------------------------CCC--
Q 016111 178 AENNPGARVLVVCSDLSLGT-----------FR------------------------------------------GPS-- 202 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~-----------~~------------------------------------------~~~-- 202 (395)
|++|.+++||||++|+.+.. |. +|.
T Consensus 100 I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~ 179 (386)
T PRK08313 100 VQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH 179 (386)
T ss_pred HHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh
Confidence 99999999999999975421 00 110
Q ss_pred --C--CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceE
Q 016111 203 --D--AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLT 265 (395)
Q Consensus 203 --~--~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 265 (395)
. .+ +-.......++|||+|+||.+.+.. ..+..+...+.+.+....+.. +..
T Consensus 180 ~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-------~~~---- 248 (386)
T PRK08313 180 LHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-------FAG---- 248 (386)
T ss_pred cCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-------ccc----
Confidence 0 00 0011234456899999999876431 100112334444332211110 000
Q ss_pred EEeCchhHHHHHHHHHHHHHHhhccCCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------chh
Q 016111 266 VHLSKNVATVVSENIEKCLDEAFSPFGIK--DWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------KLS 326 (395)
Q Consensus 266 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~~~ 326 (395)
++.+ .......+++++++++|++ + +|+ .+=+|-..........+.||+.++ +++
T Consensus 249 ----~~~~--~~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~p 321 (386)
T PRK08313 249 ----RDQV--NPQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLP 321 (386)
T ss_pred ----cccc--ccHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence 0000 0112336788999999998 5 888 788888776777777899999765 222
Q ss_pred H--HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc---c-CCCCCceEEEEEEccchhhhhe
Q 016111 327 A--TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV---T-TGEGLEWGVMFGIGAGVTVDTV 383 (395)
Q Consensus 327 ~--~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~s~~a~ 383 (395)
. +=..+. ||-..++-+..+.++.++.. |+. + ++ .+..+..+.|.+...+++
T Consensus 322 vN~~GG~l~--g~p~gatG~~~~~e~~~qlr--G~ag~rQv~~--a~~~l~~~~Gg~~~~~~~ 378 (386)
T PRK08313 322 VNPSGGVLS--SNPIGASGMIRFAEAALQVM--GKAGEHQVDG--ARKALGHAYGGGSQFFSM 378 (386)
T ss_pred ccCCCcccc--cCCCcHHHHHHHHHHHHHhc--ccccCCcCCC--ccEEEEeccCCcceEEEE
Confidence 2 101122 77655566777777665421 221 1 23 256777777643333333
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-14 Score=139.31 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +..|..+..++..+|++... ++++++.+|++++.|+..|.++|+
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTV-PGMQLDRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCC-ceeehhhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999887 56677788999999998432 378999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.|||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 104 TGAADVVIAGGAESMSN 120 (404)
T ss_pred cCCCCEEEEeeehhhcc
Confidence 99999999999998773
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=138.41 Aligned_cols=260 Identities=16% Similarity=0.141 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC------------------EEEEEec---------------CC-C-------CCCCH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT------------------HLIFCSL---------------VG-V-------DMPGA 140 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id------------------~vi~~s~---------------t~-~-------~~p~~ 140 (395)
...|+..|++++|+++|++.++++ .++.++. .+ + ..|..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999999644322 1222221 11 1 34568
Q ss_pred HHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec---------------ccccc------C
Q 016111 141 DYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL---------------SLGTF------R 199 (395)
Q Consensus 141 a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~---------------~s~~~------~ 199 (395)
+.+|+..+|++.. ++++..+|++++.||..|.++|++|.++.+||+++|. .+... .
T Consensus 155 a~~i~~~~gl~G~---~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTRGL---PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCCCC---ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 8999999999764 6889999999999999999999999999999999994 12100 0
Q ss_pred CCCCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHH
Q 016111 200 GPSDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSE 278 (395)
Q Consensus 200 ~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 278 (395)
.|.+. + ..++++||||+|+||++.+... .+....-.+...+.. .+.... .... .. ..
T Consensus 232 rpfd~---~-r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~----~d~~~~--~~~~-------~~-----~~ 289 (425)
T PRK06501 232 KPFSK---D-RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEK----ADSFHR--TRSS-------PD-----GS 289 (425)
T ss_pred CCCCC---C-CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc----cCCCCC--CCCC-------CC-----HH
Confidence 12221 2 2479999999999999854310 000111122222211 000000 0000 00 12
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
.+.++++++|+++|+++ +|| ++.+|-.+....+. +.+.++-...+++.+ ..-..+||+.+|+-.+.|...+.
T Consensus 290 ~~~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHH
Confidence 35678999999999997 999 99999876554433 345555322233321 13457799999998777754332
Q ss_pred hhhhcCCccC-----------------C----CCCceEEEEEEccchhhhheeeeecC
Q 016111 353 KSAEEGKVTT-----------------G----EGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 353 ~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
. .+++.+.| . .+.+.++.-+||.|..-++++|+..+
T Consensus 368 ~-l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 368 T-IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred H-HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1 11133221 0 01245778889999999999988654
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.7e-14 Score=137.99 Aligned_cols=95 Identities=19% Similarity=0.163 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++..+ +.....+......+|++... ++++++.+|++++.|+..|.++|+
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~-p~~~V~~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSV-GCTTVNKMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCc-cEeeccccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998776 33222333334445666433 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|++++|++|.
T Consensus 109 sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 109 AGSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCCEEEEEeeeccCC
Confidence 99999999999999873
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-13 Score=134.89 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|+++++||.||++++.+ +..+..+..++..||+++.+ +++++.+|++++.+|..|..+|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999887665 33345678999999997654 78999999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|..++|||+++|..+
T Consensus 101 sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 101 AGLCDVALVVGADTTP 116 (399)
T ss_pred CCCCCEEEEEEEcccC
Confidence 9999999999999865
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=138.33 Aligned_cols=224 Identities=15% Similarity=0.146 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC-C-------------------CCCCHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG-V-------------------DMPGADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~-~-------------------~~p~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+|+++||+++|+++++++. |++++..+ + ..+..+..++..+|+...
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~--- 162 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP--- 162 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCC---
Confidence 45789999999999999999887774 77666533 1 113467889999999763
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------------cCCCCCCCchhhhhhhhhccccE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------------FRGPSDANLGCLAGQALFGDGAA 220 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------------~~~~~~~~~~~~~~~~~fGDgAa 220 (395)
++.+..+|++++.||..|..+|++|.++.+||+++|..... ...|.+ ....++++||||+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~----~~~~g~~~geGAa 238 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFD----ADADGYVRGEGVG 238 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCC----CCCCCeeeeceEE
Confidence 68899999999999999999999999999999999985310 011222 1224789999999
Q ss_pred EEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce
Q 016111 221 ALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL 299 (395)
Q Consensus 221 A~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di 299 (395)
|+||++.+.. ..+.....++...+......... . ..+ ....+.++++++|+++|+++ +||
T Consensus 239 alvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~--------~~p-----~~~~~~~a~~~al~~Agi~~-~di 299 (421)
T cd00833 239 VVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKG-----I--------TAP-----SGEAQAALIRRAYARAGVDP-SDI 299 (421)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCC-----C--------cCC-----CHHHHHHHHHHHHHHhCCCH-HHC
Confidence 9999975432 10011122333322111000000 0 000 12345678899999999997 999
Q ss_pred -EEEEcCCChHH-----HHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 300 -FWIVQPGGPAI-----VNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 300 -~~i~hq~~~~~-----~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
++.+|-.+... .+.+.+.++-.. .+++.+ ..-..+||+.+|+-++.|...+
T Consensus 300 d~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 300 DYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred cEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 88899765332 344455554321 122221 1345689999999888776543
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.1e-13 Score=135.13 Aligned_cols=262 Identities=16% Similarity=0.160 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------V----DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lgl 150 (395)
...|+..|+++||+++|++++++| .|+++++.. + ..+ ..+.++...||+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 568999999999999999998888 577766421 1 111 256789999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c----------CCCCCC-C-chhhhhhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----F----------RGPSDA-N-LGCLAGQA 213 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~----------~~~~~~-~-~~~~~~~~ 213 (395)
... .+.+..+|++++.||..|..+|++|.++.+||.++|..+.. | .+|... . .+....++
T Consensus 152 ~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~ 228 (411)
T PRK07314 152 KGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGF 228 (411)
T ss_pred CCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCE
Confidence 764 57788999999999999999999999999999999864320 0 011100 0 01112478
Q ss_pred hhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC
Q 016111 214 LFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG 292 (395)
Q Consensus 214 ~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 292 (395)
++||||+|+||++.+... .+.....++.+.+....... ... ++ . ......++++++|+++|
T Consensus 229 ~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~--~~~----~~-------~-----~~~~~~~a~~~Al~~ag 290 (411)
T PRK07314 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MTA----PA-------P-----DGEGAARAMKLALKDAG 290 (411)
T ss_pred eEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCC--CCC----CC-------C-----CcHHHHHHHHHHHHHcC
Confidence 999999999999754310 00112334443322110000 000 00 0 01123468889999999
Q ss_pred CCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 293 IKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 293 l~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
+++ +|| ++-.|-.+... .+.+.+.++....+++.+ ..-..+||+.+|+-.+.|...+.. .+++.+-|
T Consensus 291 i~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ipp~~~~ 367 (411)
T PRK07314 291 INP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQVIPPTINL 367 (411)
T ss_pred CCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCCcCCCCCC
Confidence 997 999 88888766533 344556666543444332 134568999888877666553331 11132221
Q ss_pred -------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 -------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+ .+.++++..+||.|.+-++++|+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 368 DNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred CCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012568888999999988998875
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-13 Score=134.19 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=162.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCC---CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMP---GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p---~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ 176 (395)
+..+|+.+|++++|+++|++++|||.|+++++.+ +..| .....+...++ ... ++++++.+|++++.++..|..
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~-p~~~V~~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNI-PAMAVDRQCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCC-cchhhhhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876 3223 22334444444 322 389999999999999999999
Q ss_pred HHHcCCCCeEEEEEeecccccc--------C------CCC----CCC-------------------ch------------
Q 016111 177 FAENNPGARVLVVCSDLSLGTF--------R------GPS----DAN-------------------LG------------ 207 (395)
Q Consensus 177 ll~~g~~~~vLvv~~d~~s~~~--------~------~~~----~~~-------------------~~------------ 207 (395)
+|++|.++++||++.|++|..- . ++. +.. ++
T Consensus 108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~ 187 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL 187 (394)
T ss_pred HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999766310 0 000 000 00
Q ss_pred ----------------------------hh---h-------------------------hhhhhccccEEEEEecCCCC-
Q 016111 208 ----------------------------CL---A-------------------------GQALFGDGAAALIIGANPDT- 230 (395)
Q Consensus 208 ----------------------------~~---~-------------------------~~~~fGDgAaA~vl~~~~~~- 230 (395)
++ . ..+..+|||+|+||++.+..
T Consensus 188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~ 267 (394)
T PRK06445 188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVK 267 (394)
T ss_pred HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHH
Confidence 00 0 01111344444444432210
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
..+..+..++.+.+... ..... .......+++++|+++|+++ +|| ++=+|-....
T Consensus 268 ~~~~~~~a~i~g~~~~~--------------------~~~~~---~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~~ 323 (394)
T PRK06445 268 KYGLKPMAKIRSFGFAG--------------------VPPAI---MGKGPVPASKKALEKAGLSV-KDIDLWEINEAFAV 323 (394)
T ss_pred HCCCCceEEEEEEEEec--------------------cCCch---hcchHHHHHHHHHHHcCCCH-HHcCEEEecccchH
Confidence 00000111222211100 00000 11134568899999999997 999 8889988777
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 310 ~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
..-...+.||+.++++-.+ --.-.+||...++-...+.++.++.. .+.+ .+.|....|+|..-.+++|+.
T Consensus 324 ~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 324 VVLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQLQ----IKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHHH----hcCC---CEEEEEEcccCChhhEEEEEc
Confidence 7777789999988776543 23556899999999998888887621 2233 566777777777777777763
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.5e-13 Score=132.54 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|+.+++||.|+++++.+ . ..+..+..++..+|++... +++.++.+|++++.|+..|..+|
T Consensus 26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~-p~~~V~~aCaSG~~Al~~A~~~I 104 (391)
T PRK07661 26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV-PAITINRYCSSGLQSIAYGAERI 104 (391)
T ss_pred CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHH
Confidence 3789999999999999998889999999998776 2 2366777899999998522 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+||+++|++|.
T Consensus 105 ~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 105 MLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HcCCCCEEEEEEEeeccc
Confidence 999999999999998763
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=128.82 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHhCCCC--CCcCEEEEEecCC-----------------------------CCCC-CHHHHHHHHcCCCC
Q 016111 105 LGEEAATKAIKEWGQSK--SQITHLIFCSLVG-----------------------------VDMP-GADYQLTKMLGLNP 152 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~--~~Id~vi~~s~t~-----------------------------~~~p-~~a~~l~~~Lgl~~ 152 (395)
++..|+++||+++|+++ +++ .|+++|+.+ ..+| ..+.+++..+|++.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC
Confidence 56689999999999964 344 455555422 0112 24678899999997
Q ss_pred ccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-cccc----c----------CCCCCCCchhhhhhhhhcc
Q 016111 153 SVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SLGT----F----------RGPSDANLGCLAGQALFGD 217 (395)
Q Consensus 153 ~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s~~----~----------~~~~~~~~~~~~~~~~fGD 217 (395)
. .+.+..+|++++.||..|.++|++|..+.+||.++|. .+.. | ..|.+.+ ..++++||
T Consensus 138 p---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~----r~G~v~gE 210 (381)
T PRK05952 138 P---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQ----REGLVLGE 210 (381)
T ss_pred c---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCC----CCCccccc
Confidence 5 5789999999999999999999999999999999996 3210 0 1133322 24899999
Q ss_pred ccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCC
Q 016111 218 GAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDW 296 (395)
Q Consensus 218 gAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 296 (395)
||+++||++.+.. ..+.....++...+....... ... +.. -.....++++++|+++|+.+
T Consensus 211 Gaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~--------------~~~-~~~---~~~~~~~ai~~Al~~agi~p- 271 (381)
T PRK05952 211 GGAILVLESAELAQKRGAKIYGQILGFGLTCDAYH--------------MSA-PEP---DGKSAIAAIQQCLARSGLTP- 271 (381)
T ss_pred cEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCC--------------CCC-CCC---CHHHHHHHHHHHHHHhCCCH-
Confidence 9999999986431 000112334444332111000 000 000 12234578899999999997
Q ss_pred Cce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCC-------
Q 016111 297 NSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG------- 363 (395)
Q Consensus 297 ~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G------- 363 (395)
+|| ++-.|-.+.+. .+.+.+.++- +++.+ .+-..+||+.+|+-.+.+...+.. .+++.+-|=
T Consensus 272 ~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~~ 346 (381)
T PRK05952 272 EDIDYIHAHGTATRLNDQREANLIQALFPH---RVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEPE 346 (381)
T ss_pred HHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCCC
Confidence 999 88899766544 3345556652 23322 145789999999988877765432 111333220
Q ss_pred -----------CCCceEEEEEEccchhhhheeee
Q 016111 364 -----------EGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 364 -----------~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
.+.++++..+||.|..-++++|+
T Consensus 347 ~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 347 FDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred CCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 01257899999999998888886
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.7e-12 Score=127.13 Aligned_cols=258 Identities=14% Similarity=0.159 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lgl 150 (395)
...++..|+.+||+++|+++.+.+ .|+++++.+ + ..+ ..+.+|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 457889999999999999764433 466666421 1 111 367899999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cC----------CCCCCCchhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FR----------GPSDANLGCL 209 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~----------~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|..+.+||+++|..... +. .|.+. .
T Consensus 154 ~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~----~ 226 (414)
T PRK08722 154 RGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDK----D 226 (414)
T ss_pred CCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcC----C
Confidence 986 57899999999999999999999999999999999985321 10 12221 2
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..+++.||||+++||++.+.. ..+.....++...+.. + +..+. . .+.. ......++++++|
T Consensus 227 ~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~----~-d~~~~---------~-~p~~---~~~~~~~a~~~Al 288 (414)
T PRK08722 227 RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS----G-DAYHM---------T-SPSE---DGSGGALAMEAAM 288 (414)
T ss_pred CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc----C-CCCCC---------C-CCCc---chHHHHHHHHHHH
Confidence 358899999999999975431 0001122334332211 0 00000 0 0000 0122346788999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCC-ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLK-QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~-~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
+++|+++ +|| ++-.|-.+.. -.+.+.+.+|-. ..+++.+ .+-..+||+.+|+-.+.|...+.. .+++.+-
T Consensus 289 ~~agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~~ip 365 (414)
T PRK08722 289 RDAGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMS-LVDQIVP 365 (414)
T ss_pred HHcCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHH-HhcCccC
Confidence 9999997 999 8888875543 345566677632 2233332 134688999999887777543221 1112211
Q ss_pred C-----------------C-----CCCceEEEEEEccchhhhheeeee
Q 016111 362 T-----------------G-----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ~-----------------G-----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
| + ....+++.-+||.|.+-++++|+.
T Consensus 366 p~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 366 PTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 1 0 012567888899999988888863
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-12 Score=129.18 Aligned_cols=257 Identities=15% Similarity=0.177 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC---cC----EEEEEecCC-C--------------------CCC-----CHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQ---IT----HLIFCSLVG-V--------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~---Id----~vi~~s~t~-~--------------------~~p-----~~a~~l~~~L 148 (395)
...|+..|+++||+++|++++. ++ .|++++..+ . ..| ..+..|+..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 4568899999999999997642 21 566666532 0 011 2356889999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCCCCch
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F----------RGPSDANLG 207 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~~ 207 (395)
|+... .+.+..+|++++.||..|..+|++|..+.+||.++|..... + ..|.|.+
T Consensus 279 gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~-- 353 (540)
T PLN02787 279 GWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN-- 353 (540)
T ss_pred CCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC--
Confidence 99875 57899999999999999999999999999999999963110 0 1132222
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..++++|+||+++||++.+.. ..+....-++.+.+... ++.++.. +. --...+.++|++
T Consensus 354 --rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~--------------Da~~~t~-p~---p~g~g~~~am~~ 413 (540)
T PLN02787 354 --RDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTC--------------DAYHMTE-PH---PEGAGVILCIEK 413 (540)
T ss_pred --CCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEec--------------CCCCCCC-CC---cCHHHHHHHHHH
Confidence 248999999999999975431 00011123444322110 1110000 00 001234578899
Q ss_pred hhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
+|+++|+++ +|| ++-.|-.+.+. .+.+.+.+|-.. .++.+ .+-..+||+.+|+-.+.+...+.. .++|.+
T Consensus 414 AL~~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~~g~i 489 (540)
T PLN02787 414 ALAQSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IRTGWV 489 (540)
T ss_pred HHHHcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-HhcCCc
Confidence 999999998 999 88899765443 455666777322 22221 135689999999877766554321 111332
Q ss_pred cC-----------------C-C----CCceEEEEEEccchhhhheeeee
Q 016111 361 TT-----------------G-E----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 361 ~~-----------------G-~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
-| + . ..+.+|..+||-|..-++++|+-
T Consensus 490 PPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 490 HPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 21 0 0 11456778899998888888874
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.3e-13 Score=131.73 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++ |++++|||.|++++..+ ...+..+..++..+|+++.+ ++.++.+|+++..++..|.++
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHH
Confidence 47899999999999997 99999999999876544 22355678899999997543 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|.++.|||+++|++|.
T Consensus 104 I~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 104 IKAGEGDVFISAGVETVSR 122 (406)
T ss_pred HHCCCCCEEEEeeEEeccc
Confidence 9999999999999998653
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-12 Score=130.44 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPG-ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~-~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||+++.++ +..+. .+..+...+|++... +++.++.+|++++.|+..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~-pa~~V~~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc-ceEEEeccCchHHHHHHHHHHHH
Confidence 5799999999999999999999999999988766 44343 445677788998633 37899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.|||++.|++|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998763
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.4e-12 Score=125.34 Aligned_cols=95 Identities=8% Similarity=-0.029 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ .. ....+..+...+|++... +++.++++|++++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~-p~~tV~~~CaSG~~A~~~A~~~I 103 (387)
T PRK07850 25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV-GATTIDCQCGSAQQANHLVAGLI 103 (387)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC-ceEEEecccccHHHHHHHHHHHH
Confidence 3789999999999999999999999999987654 22 133556777779998543 38899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 104 AAGAIDVGIACGVEAMSR 121 (387)
T ss_pred HCCCCCEEEEEeEecCCC
Confidence 999999999999999874
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=126.53 Aligned_cols=95 Identities=9% Similarity=0.025 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC--CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV--DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~--~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+..+++.+|+++|++|++||.||++...+. ..+..+.++.-..|++..+ +++.++..|+|++.|+.+|.+.|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~v-p~~tvnr~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKA-SGVTLDRFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCC-CeeeeccccchHHHHHHHHHHHH
Confidence 38899999999999999999999999999988762 2467889999999999876 49999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+.+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999984
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.6e-12 Score=126.42 Aligned_cols=232 Identities=17% Similarity=0.105 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD--MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~--~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++|+++++||.|+++++.+ +. .+..+..+...+|+...+ +++++++|++++.||.+|..+
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHH
Confidence 3789999999999999999999999999987643 21 112233445566777654 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-------------c--------C-------------------------------------
Q 016111 178 AENNPGARVLVVCSDLSLGT-------------F--------R------------------------------------- 199 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~-------------~--------~------------------------------------- 199 (395)
|++|.+++|||+++|++|.. + .
T Consensus 99 I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~ 178 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA 178 (389)
T ss_pred HHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999986421 0 0
Q ss_pred CCCC-----CCch----------------hhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccceE
Q 016111 200 GPSD-----ANLG----------------CLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQ 258 (395)
Q Consensus 200 ~~~~-----~~~~----------------~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 258 (395)
+|.- .+.+ .......++|||+|+||.+++.... .....++...+...... .+.
T Consensus 179 nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~-~~~~v~i~g~~~~~~~~-----~~~ 252 (389)
T PRK07516 179 NPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARA-LQRAVRFRARAHVNDFL-----PLS 252 (389)
T ss_pred CChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHh-cCCCEEEEEEEeccCcc-----ccc
Confidence 0100 0000 0012234578988888887543110 01123343332211000 000
Q ss_pred EecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016111 259 FREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-------------- 323 (395)
Q Consensus 259 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-------------- 323 (395)
..+.. .......+++++++++|+++ +|| ++-+|-......-...+.||+.+.
T Consensus 253 ----------~~~~~--~~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 253 ----------RRDPL--AFEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred ----------CCCcc--ccHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 00000 01223368889999999997 999 888998877777777889998764
Q ss_pred --chhHHH-HHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 --KLSATR-HVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 --~~~~~~-~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+++.|. -=+..+||...|+-...+.++..+
T Consensus 320 ~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 320 DGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCeeecCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 222220 003468999999999988887664
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-12 Score=126.41 Aligned_cols=236 Identities=13% Similarity=0.082 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-----CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-----PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-----p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+..+|+.+|++++|+++|+++++||.||++++++ +.. +.....++ +++...+ +++++.+|++++.||.+|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~g~~--~~~v~~~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALWGVP--ASRHEAACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCCCCc--eeecccccHHHHHHHHHH
Confidence 3799999999999999999999999999988765 221 22222222 2443332 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeecccccc-------------C------CCCC-CC-----------------------------
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTF-------------R------GPSD-AN----------------------------- 205 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~-------------~------~~~~-~~----------------------------- 205 (395)
..+|++|.+++|||+++|+++... . .|.. ..
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~ 180 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFA 180 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999999999865210 0 0000 00
Q ss_pred ----------c----------hh------------hhhhhhhccccEEEEEecCCCC-CCCC-CCceEEEeeeeeecCCC
Q 016111 206 ----------L----------GC------------LAGQALFGDGAAALIIGANPDT-TLSE-KPLFQIVSGAQTILPGS 251 (395)
Q Consensus 206 ----------~----------~~------------~~~~~~fGDgAaA~vl~~~~~~-~~~~-~~~~~~~~~~~~~~p~~ 251 (395)
+ ++ .......+|||+|+||.+++.. ..+. .+...+.+.+....+..
T Consensus 181 ~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~ 260 (403)
T PRK06289 181 NARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG 260 (403)
T ss_pred HHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc
Confidence 0 00 0011123688888888865421 1101 12244554432211100
Q ss_pred cCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-------
Q 016111 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------- 323 (395)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------- 323 (395)
. ........ ..... ......+.+++++++|+++ +|| .+-+|-.-....-...|.||+.+.
T Consensus 261 ~---~~~~~~~~------~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 261 L---EQKLDRSA------GDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred c---cccccccc------ccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHH
Confidence 0 00000000 00000 1113357889999999997 999 788898877777777899998752
Q ss_pred -----------chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 -----------KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 -----------~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ --.-.+||-..++-+..+.+++.+
T Consensus 329 ~~G~~~~~G~lpvN~~-GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 329 ENGEIAIGGRLPINPS-GGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred hcCCcccCCCeeEcCC-CCccccCCCccchHHHHHHHHHHH
Confidence 22221 112347999988888888888775
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.8e-12 Score=125.14 Aligned_cols=227 Identities=17% Similarity=0.154 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.|++++.. +..|+ ..+++.||+++.+ +++++.+|+++..+|..|.++|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHcC
Confidence 78999999999999999999999999987642 23343 5799999998764 7888999999999999999999999
Q ss_pred CCCeEEEEE-eecccc-----c------cC-------------------------------------------CCCC---
Q 016111 182 PGARVLVVC-SDLSLG-----T------FR-------------------------------------------GPSD--- 203 (395)
Q Consensus 182 ~~~~vLvv~-~d~~s~-----~------~~-------------------------------------------~~~~--- 203 (395)
.+++|||+. .+..+. . +. +|.-
T Consensus 103 ~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~ 182 (384)
T PRK06158 103 LCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMR 182 (384)
T ss_pred CCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhC
Confidence 999999984 433221 0 00 0100
Q ss_pred --C------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEe
Q 016111 204 --A------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHL 268 (395)
Q Consensus 204 --~------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 268 (395)
. ++-.....+..+|||+|+||.+.+.. ..+. ....+...+....... ....
T Consensus 183 ~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~-~~v~i~g~~~~~~~~~-------~~~~------ 248 (384)
T PRK06158 183 DPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPR-PPVYVLGAAAATWHRQ-------ISSM------ 248 (384)
T ss_pred CCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCC-CcEEEEEEEEecCCcc-------cccc------
Confidence 0 00012234568999999999976531 1101 1233333222110000 0000
Q ss_pred CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------chhHH-HH
Q 016111 269 SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------KLSAT-RH 330 (395)
Q Consensus 269 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~~~~~-~~ 330 (395)
..+. ......+++++++++|+++ +|| ++=+|-.-...-....|.||+.+. +++.| .-
T Consensus 249 -~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sG 323 (384)
T PRK06158 249 -PDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNG 323 (384)
T ss_pred -cchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCC
Confidence 0111 1223468889999999997 999 778888776666677799998644 12211 00
Q ss_pred HHHhcCCCccchHHHHHHHHHHh
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
=+-.+||. .++-+..+.++.++
T Consensus 324 G~ls~Ghp-gatG~~~~~E~~~Q 345 (384)
T PRK06158 324 GGLSCVHP-GMYGLFLLIEAVRQ 345 (384)
T ss_pred hhhcCCCC-chhhHHHHHHHHHH
Confidence 13346888 45566666665553
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-12 Score=129.28 Aligned_cols=255 Identities=12% Similarity=0.094 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHhCCC---CCCcCEEEEEecC---------------C-CCCC---------CHHHHHHHHcCCCCc
Q 016111 102 VPKLGEEAATKAIKEWGQS---KSQITHLIFCSLV---------------G-VDMP---------GADYQLTKMLGLNPS 153 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~---~~~Id~vi~~s~t---------------~-~~~p---------~~a~~l~~~Lgl~~~ 153 (395)
...|+..|++++|+++|++ +++|+.++.++.. + +..| ..+.+|+..||+...
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G~ 159 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGE 159 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCCC
Confidence 5679999999999999986 3556555543321 1 1111 256788899999764
Q ss_pred cccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc----------c------------cCCCCCCCchhhh
Q 016111 154 VKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LG----------T------------FRGPSDANLGCLA 210 (395)
Q Consensus 154 ~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~----------~------------~~~~~~~~~~~~~ 210 (395)
.+.+..+|++++.||..|..+|++|.++.+||+++|.. +. . ...|.+. ..
T Consensus 160 ---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~----~~ 232 (410)
T PRK07103 160 ---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ----DR 232 (410)
T ss_pred ---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC----CC
Confidence 57799999999999999999999999999999998641 10 0 0012222 12
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+..... . . .. .+. .....++++++|+
T Consensus 233 dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~-~-~-----~~--------~p~-----~~~~~~a~~~Al~ 292 (410)
T PRK07103 233 DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDA-N-R-----GP--------DPS-----LEGEMRVIRAALR 292 (410)
T ss_pred CCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCC-C-C-----CC--------CCC-----HHHHHHHHHHHHH
Confidence 47899999999999975431 0001123344433321100 0 0 00 011 1123478889999
Q ss_pred cCCCCCCCce-EEEEcCCChHHHHHHH-HH-cCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIVNQIE-AK-LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~~~i~-~~-lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
++|+++ +|| ++..|-.+....+.+. +. ++.....++.+ .+-..+||+.+|+-.+.|...+.. .+++.+-|
T Consensus 293 ~Agi~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~~~ 369 (410)
T PRK07103 293 RAGLGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSRNL 369 (410)
T ss_pred HcCCCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCCCC
Confidence 999997 999 8899987665432221 11 22211222221 134667999999988888654321 11122210
Q ss_pred ------------C----CCCceEEEEEEccchhhhheeee
Q 016111 363 ------------G----EGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 363 ------------G----~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
. ....+++..+||.|.+-++++|+
T Consensus 370 ~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 370 DEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 01257888899999998888886
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-12 Score=128.12 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=163.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCc-C----EEEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQI-T----HLIFCSLVG-V---------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~I-d----~vi~~s~t~-~---------------------~~p-----~~a~~l~~~L 148 (395)
....|+..|++++|+++|++++++ + .|++++..+ + ..+ ..+.+|...+
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356799999999999999987766 3 566666432 1 111 2467899999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCCCCCc
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F-----------RGPSDANL 206 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~~~~~ 206 (395)
|+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + ..|.+.
T Consensus 161 gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~-- 235 (424)
T PRK06333 161 GFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR-- 235 (424)
T ss_pred CCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC--
Confidence 99765 67889999999999999999999999999999999973210 1 012221
Q ss_pred hhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLD 285 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 285 (395)
...+++.||||+++||++.+.. ..+.....++...+... + +.++.. +. .......++++
T Consensus 236 --~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~----d----------~~~~~~-~~---~~~~~~~~a~~ 295 (424)
T PRK06333 236 --DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSA----D----------AYHMTA-GP---EDGEGARRAML 295 (424)
T ss_pred --CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC----C----------CCCCCC-CC---CCcHHHHHHHH
Confidence 1247889999999999975431 00011122343332110 0 000000 00 01223457889
Q ss_pred HhhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCC
Q 016111 286 EAFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK 359 (395)
Q Consensus 286 ~~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~ 359 (395)
++|+++|+++ +|| ++-.|-.+.. -...+.+.+|- ..+++.+ .....+||+.+|+-.+.+...+.. .++|.
T Consensus 296 ~Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg~-~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~-l~~g~ 371 (424)
T PRK06333 296 IALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFGH-VSGLAVS-STKSATGHLLGAAGGVEAIFTILA-LRDQI 371 (424)
T ss_pred HHHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhCC-CCCceeE-CcccchhhhHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999997 999 8889976544 24556677772 2233322 146788999888866655543321 11121
Q ss_pred ccC------------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 360 VTT------------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 360 i~~------------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+-| + .+.++++..+||.|.+..+++|+.
T Consensus 372 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 372 APPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred cCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 110 0 012567888999998888888874
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.5e-12 Score=124.64 Aligned_cols=257 Identities=15% Similarity=0.114 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|++++|+++|+++++||.+++++..+.... ...+...+|+...+ ++.++.+|++++.+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999988776552211 23567789997643 6789999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-c---------------------CCCC-CC----------------------------------
Q 016111 182 PGARVLVVCSDLSLGT-F---------------------RGPS-DA---------------------------------- 204 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-~---------------------~~~~-~~---------------------------------- 204 (395)
.++.|||+++|..+.. + ..+. ..
T Consensus 98 ~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~ 177 (391)
T PRK08256 98 AADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRH 177 (391)
T ss_pred CCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 9999999999986520 0 0000 00
Q ss_pred -------------Cch------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceE
Q 016111 205 -------------NLG------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQ 258 (395)
Q Consensus 205 -------------~~~------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 258 (395)
+.+ ........+|||+|+||.+++.. ..+..+..++.+.+....... ...
T Consensus 178 A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~--~~~-- 253 (391)
T PRK08256 178 AANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPS--TFD-- 253 (391)
T ss_pred hhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccc--ccc--
Confidence 000 01112234788888888875431 110112344443221110000 000
Q ss_pred EecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016111 259 FREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-------------- 323 (395)
Q Consensus 259 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-------------- 323 (395)
. .+. .... .......+++++++++|+++ +|| .+-+|.......-...|.||+.++
T Consensus 254 ~-~~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~ 323 (391)
T PRK08256 254 G-RSM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTY 323 (391)
T ss_pred c-ccc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 0 000 0000 01122357889999999997 999 889999887888888899999876
Q ss_pred ----chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc-C--CccCCCCCceEEEEEEccchhh
Q 016111 324 ----KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE-G--KVTTGEGLEWGVMFGIGAGVTV 380 (395)
Q Consensus 324 ----~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~-g--~i~~G~~~d~vll~~~G~G~s~ 380 (395)
++-.+ -=.-.+||...|+-...+.++..+...+ | .++.. ...+..+.|.|.+.
T Consensus 324 ~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~ 383 (391)
T PRK08256 324 GGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGAC 383 (391)
T ss_pred CCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeE
Confidence 33221 1123479999888888888877752211 1 12222 56777777755443
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.3e-12 Score=126.13 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ ...+..+..++..+|++... +++.++.+|++++.|+..|..+|+
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV-PGYTINKVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc-cchhhcchhHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999988765 33345667788999998533 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998873
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-11 Score=120.36 Aligned_cols=233 Identities=16% Similarity=0.061 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.+|+++... + ..+..+..+++.||+.+.+ ++.++.+|+++..+|..|.++|
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHH
Confidence 3789999999999999999999999999876322 2 2456788899999988654 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc---------------cC------------------------------------------CC
Q 016111 179 ENNPGARVLVVCSDLSLGT---------------FR------------------------------------------GP 201 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~---------------~~------------------------------------------~~ 201 (395)
++|.+++||||++|+++.. +. +|
T Consensus 106 ~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP 185 (392)
T PRK06065 106 ASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNP 185 (392)
T ss_pred hCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCc
Confidence 9999999999999974210 00 01
Q ss_pred CC-----CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCc
Q 016111 202 SD-----AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMG 263 (395)
Q Consensus 202 ~~-----~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 263 (395)
.- .+ +-........+|||+|+||.+.+.. ..+.. ...+...+...-+.. +... +
T Consensus 186 ~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~-~v~I~g~~~~~~~~~-----~~~~-~- 257 (392)
T PRK06065 186 YAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDT-PVWVEGVGWTLDNTE-----WPNR-D- 257 (392)
T ss_pred hhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCC-CEEEEEEEEecCccc-----cccc-c-
Confidence 00 00 0011223456899999999875421 11011 222443332211110 0000 0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHhhccCCCCC-CCce-EEEEcCCChHHHHHHHHHcCCCcc-c---------------h
Q 016111 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKD-WNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-K---------------L 325 (395)
Q Consensus 264 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~-~~di-~~i~hq~~~~~~~~i~~~lgi~~e-~---------------~ 325 (395)
+. .......+.+++++++|+++ .+|+ .+=+|-.-..+.-...|.||+-+. + +
T Consensus 258 --~~--------~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~ 327 (392)
T PRK06065 258 --LA--------YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDI 327 (392)
T ss_pred --cc--------ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCe
Confidence 00 01112357788999999973 3778 777887765555556688886432 1 1
Q ss_pred hHH-HHHHHhcCCCccchHHHHHHHHHHh
Q 016111 326 SAT-RHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 326 ~~~-~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+.| .--+-.+||.+.++-+..+.++.++
T Consensus 328 pvN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 328 PSSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred eecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 110 0012337999988888888887765
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.7e-12 Score=126.89 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=165.6
Q ss_pred hHHHHHHHHHHHHHHHhCCC-CCCcC----EEEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQS-KSQIT----HLIFCSLVG-V---------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~-~~~Id----~vi~~s~t~-~---------------------~~p-----~~a~~l~~~L 148 (395)
....|+..|+++||+++|++ +++++ .+++++..+ + ..| ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 36789999999999999998 66654 355544322 1 011 2467888899
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cC-----CCCCCC--chhhh
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FR-----GPSDAN--LGCLA 210 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~-----~~~~~~--~~~~~ 210 (395)
|+... ++.+..+|++++.||..|..+|++|..+.+||+++|..... +. +|.... .+...
T Consensus 156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99976 57889999999999999999999999999999999973210 00 111000 01112
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+... . +.++.. +.. ......++++++|+
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d------------~~~~~~-p~~---~~~~~~~ai~~Al~ 294 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSS--D------------AHHITA-PHP---DGRGARRCMENALK 294 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--C------------CCCCCC-CCC---ChHHHHHHHHHHHH
Confidence 47889999999999986531 00011122343332210 0 000000 000 01234568899999
Q ss_pred c-CCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 290 P-FGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 290 ~-~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
+ +|+++ +|| ++-.|-.+... .+.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 295 ~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~~~ip 371 (421)
T PTZ00050 295 DGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYEQIIP 371 (421)
T ss_pred hccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHcCccC
Confidence 9 99997 999 88899766533 345666666322 223322 134689999999988888765431 1113321
Q ss_pred C---------C--------------CCCceEEEEEEccchhhhheeeee
Q 016111 362 T---------G--------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ~---------G--------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
| . .....++..+||.|.+-++++|+.
T Consensus 372 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 372 PTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 1 0 012578899999999999999874
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-13 Score=103.72 Aligned_cols=66 Identities=23% Similarity=0.229 Sum_probs=55.1
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
||++++|+|++.||++|.++|++|..++||||++|+.+. +.++ .++.+..+|||||+|+||+++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~-----~~~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDR-----TDRQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHT-----THHHHHTTB-EEEEEEEEEEESS
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccc-----cccCcceeecchheEEEEEecCC
Confidence 689999999999999999999999999999999999997 4433 23456789999999999999754
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.5e-12 Score=124.59 Aligned_cols=254 Identities=17% Similarity=0.156 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++... ...+..+..++..+|++... ++..++.+|++++.++..|.++|+
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~v~~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPST-ICTTVNKVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCC-ceEEEeccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999876543 22234455688999997543 367789999999999999999999
Q ss_pred cCCCCeEEEEEeecccccc--C------------------------CCC-C---------------CCch----------
Q 016111 180 NNPGARVLVVCSDLSLGTF--R------------------------GPS-D---------------ANLG---------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~--~------------------------~~~-~---------------~~~~---------- 207 (395)
+|.++.||+++.|.+|... . +|. . .+++
T Consensus 103 sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~ 182 (394)
T PLN02644 103 LGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSY 182 (394)
T ss_pred cCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 9999999999988765200 0 000 0 0000
Q ss_pred -----hhh-------------------------------------------------------hhhhhccccEEEEEecC
Q 016111 208 -----CLA-------------------------------------------------------GQALFGDGAAALIIGAN 227 (395)
Q Consensus 208 -----~~~-------------------------------------------------------~~~~fGDgAaA~vl~~~ 227 (395)
++. .....+|||+|+||.+.
T Consensus 183 ~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~ 262 (394)
T PLN02644 183 ERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSG 262 (394)
T ss_pred HHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccH
Confidence 000 01122455555555543
Q ss_pred CCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcC
Q 016111 228 PDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP 305 (395)
Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq 305 (395)
... ..+..+..++.+.+.... ..... ...-..+++++|+++|+++ +|| ++=+|-
T Consensus 263 ~~A~~~~~~~~a~I~g~~~~~~--------------------~~~~~---~~~~~~a~~~al~~Agi~~-~Did~~Ei~d 318 (394)
T PLN02644 263 EKALELGLQVIAKIRGYADAAQ--------------------APELF---TTAPALAIPKALKHAGLEA-SQVDYYEINE 318 (394)
T ss_pred HHHHHCCCCeEEEEEEEEEcCC--------------------CCccc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCc
Confidence 221 000011112222211000 00000 0011248889999999997 999 777787
Q ss_pred CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 306 GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 306 ~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
......-...+.||+..+++..+ --.-.+||..+++-...+.++..+.. + +.| .+.+....++|..-++++|
T Consensus 319 ~f~~~~l~~~e~lg~~~~~vN~~-GG~l~~Ghp~gasG~~~~~~~~~~l~--~--~~~---~~g~~~~~~~gg~g~a~~~ 390 (394)
T PLN02644 319 AFSVVALANQKLLGLDPEKVNVH-GGAVSLGHPIGCSGARILVTLLGVLR--S--KNG---KYGVAGICNGGGGASAIVV 390 (394)
T ss_pred HHHHHHHHHHHHhCCCccccCCC-CChHhhCCCHHHHHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEE
Confidence 66666666788999987776543 23456899999999888888877621 1 233 4566645555555566777
Q ss_pred ee
Q 016111 386 RS 387 (395)
Q Consensus 386 ~~ 387 (395)
+.
T Consensus 391 e~ 392 (394)
T PLN02644 391 EL 392 (394)
T ss_pred Ee
Confidence 64
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-11 Score=120.59 Aligned_cols=256 Identities=16% Similarity=0.168 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCCcCEEEEEecCC-C---------------------C----CC-CHHHHHHHHcCCCC
Q 016111 102 VPKLGEEAATKAIKEWGQ--SKSQITHLIFCSLVG-V---------------------D----MP-GADYQLTKMLGLNP 152 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~--~~~~Id~vi~~s~t~-~---------------------~----~p-~~a~~l~~~Lgl~~ 152 (395)
...|+..|++++|+++|+ +++++..++ ++..+ . . ++ ..+.+|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 567899999999999996 555665444 44321 1 0 11 35678999999998
Q ss_pred ccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCCCCCchhhh
Q 016111 153 SVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F-----------RGPSDANLGCLA 210 (395)
Q Consensus 153 ~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~~~~~~~~~ 210 (395)
. .+.+..+|++++.||..|..+|+.|..+.+||.++|..... + ..|.|. ..
T Consensus 83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~----~r 155 (342)
T PRK14691 83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDT----AR 155 (342)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCC----CC
Confidence 6 57889999999999999999999999999999999873210 0 012222 22
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+....... +. ...+. .....++++++|+
T Consensus 156 ~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~---~~-~p~p~--------------~~~~~~ai~~AL~ 217 (342)
T PRK14691 156 DGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYH---MT-SGAED--------------GDGAYRAMKIALR 217 (342)
T ss_pred CCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCC---CC-CCCCC--------------HHHHHHHHHHHHH
Confidence 58999999999999975431 100123445554432210000 00 00000 2234468899999
Q ss_pred cCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC-
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~- 362 (395)
++|+++ +|| ++-.|-.+.+. .+.+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+...+.. .+++.+-|
T Consensus 218 ~Agl~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~~ippt 293 (342)
T PRK14691 218 QAGITP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLA-LRDQIVPAT 293 (342)
T ss_pred HcCCCH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHH-HhCCccCCc
Confidence 999997 999 88899765443 45566777732 223222 135689998777655444432211 01122111
Q ss_pred -----------------CC----CCceEEEEEEccchhhhheeeee
Q 016111 363 -----------------GE----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -----------------G~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+. +...+|..+||-|..-++++|+.
T Consensus 294 ~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 294 LNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 00 12567889999999999999864
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.3e-12 Score=123.19 Aligned_cols=223 Identities=18% Similarity=0.250 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
+.+|+..|++++++ |++ ++||.||+++..+.. ...+..+...+|++... +++.++.+|++++.|+..|..+|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~-~~~~r~~~~~~Gl~~~~-p~~tV~~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG-GNVARLSALEAGLGLHI-PGVTIDRQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc-chHHHHHHHHcCCCCCC-CceehhhhhhHHHHHHHHHHHHHHCC
Confidence 78999999999865 886 899999998875421 33455688999998433 38899999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-cC-CC-------CCC---------------Cchh-----------------------------
Q 016111 182 PGARVLVVCSDLSLGT-FR-GP-------SDA---------------NLGC----------------------------- 208 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-~~-~~-------~~~---------------~~~~----------------------------- 208 (395)
..+.+|+++.|.+|.. +. .. .+. ++++
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 10 00 000 0000
Q ss_pred ------h-h--------h--hhh--------------hccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccc
Q 016111 209 ------L-A--------G--QAL--------------FGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVA 256 (395)
Q Consensus 209 ------~-~--------~--~~~--------------fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~ 256 (395)
. . . ..+ .+|||+|+||.+.+.. ..+..+..++........
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~-------- 251 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGV-------- 251 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEecc--------
Confidence 0 0 0 011 2566666666653321 000111222322211100
Q ss_pred eEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH---HHHH
Q 016111 257 GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT---RHVL 332 (395)
Q Consensus 257 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~---~~~~ 332 (395)
..... ......+++++|+++|+++ +|| +|.+|+.+........+.||++.+++..+ ....
T Consensus 252 ------------~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~G 315 (361)
T PRK06690 252 ------------DPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALG 315 (361)
T ss_pred ------------Ccccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhcc
Confidence 00000 1233468889999999997 999 99999999999999999999988776441 0013
Q ss_pred HhcCCCccchHHHHHHHHHHh
Q 016111 333 SEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..+|++|...++..+.++.++
T Consensus 316 hp~GatG~~~~~~~~~ql~~~ 336 (361)
T PRK06690 316 HPYGASGAMLVTRLFYQAKRE 336 (361)
T ss_pred CchhhhHHHHHHHHHHHHHHh
Confidence 466777777777777766543
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-11 Score=119.65 Aligned_cols=213 Identities=12% Similarity=0.071 Sum_probs=141.3
Q ss_pred CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc--------------cCCCCCC
Q 016111 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT--------------FRGPSDA 204 (395)
Q Consensus 139 ~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~--------------~~~~~~~ 204 (395)
..+.+|+..||+... .+.+..+|++++.||..|..+|++|.++.|||+++|..+.. ...|.+.
T Consensus 138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 577899999999864 67889999999999999999999999999999999964321 1113222
Q ss_pred CchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHH
Q 016111 205 NLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCL 284 (395)
Q Consensus 205 ~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 284 (395)
+ ..++++||||+++||++.... ..++.+.+....... .. .++ + ....+.+++
T Consensus 215 ~----~~G~~~gEGaa~vVLe~~~~~------~~~I~g~g~~~d~~~---~~---~~~-------~-----~~~~~~~a~ 266 (392)
T PRK09185 215 N----RDGINIGEAAAFFLLEREDDA------AVALLGVGESSDAHH---MS---APH-------P-----EGLGAILAM 266 (392)
T ss_pred C----CCccceeceEEEEEEEEcCCC------cEEEEEEEEeCCCCC---CC---CCC-------C-----CHHHHHHHH
Confidence 1 247899999999999987321 234544332110000 00 000 0 012344788
Q ss_pred HHhhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcC
Q 016111 285 DEAFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358 (395)
Q Consensus 285 ~~~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g 358 (395)
+++|+++|+++ +|| ++.+|-.+.. -...+.+.++-.. .+ .+ +-..+||+.+|+-.+.|...+.. .++|
T Consensus 267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv-~s--~K~~~Gh~~~AaG~~~l~~~~~~-l~~~ 340 (392)
T PRK09185 267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC-SS--TKGLTGHTLGAAGAVEAAICWLA-LRHG 340 (392)
T ss_pred HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce-eC--CCcccccChhhcchHHHHHHHHH-HhcC
Confidence 99999999997 999 8899976544 2445566666321 11 12 34678999999988777665432 1112
Q ss_pred CccC---------C------------CCCceEEEEEEccchhhhheeeeec
Q 016111 359 KVTT---------G------------EGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 359 ~i~~---------G------------~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+.+ . ...++++..+||.|.+-++++|+..
T Consensus 341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 2211 0 0025788999999999999999864
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-11 Score=121.70 Aligned_cols=252 Identities=17% Similarity=0.209 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCc----CEEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSK-SQI----THLIFCSLVG-V-------------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~-~~I----d~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lg 149 (395)
...|+..|+++||+++|+.. ..+ -.|+++++.+ . .+| ..+.+|+..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 46799999999999999842 212 2566665432 0 122 25778999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc--------------------cCCCCCCCchhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT--------------------FRGPSDANLGCL 209 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~--------------------~~~~~~~~~~~~ 209 (395)
+... .+.+..+|++++.||..|..+|++|..+.+||.++|..+.. ...|.+.+
T Consensus 153 ~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~---- 225 (405)
T PRK09116 153 LKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDAN---- 225 (405)
T ss_pred CCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCC----
Confidence 9986 57899999999999999999999999999999999974320 00122221
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+.. ..+....-++...+... ++.++. .+. ...+.++++++|
T Consensus 226 ~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--------------d~~~~~-~p~-----~~~~~~ai~~AL 285 (405)
T PRK09116 226 RDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--------------DGAHVT-QPQ-----AETMQIAMELAL 285 (405)
T ss_pred CCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--------------CCCcCC-CCC-----HHHHHHHHHHHH
Confidence 248999999999999974331 00011223444332110 010000 011 233557889999
Q ss_pred ccCCCCCCCce-EEEEcCCCh-----HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGP-----AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~-----~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+++ +|| ++.+|-.+. .-.+.+.+.+|- +++.+ .+-..+||+.+|+-.+.+...+.. .+++.+.|
T Consensus 286 ~~Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp 359 (405)
T PRK09116 286 KDAGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGWFAP 359 (405)
T ss_pred HHhCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCccCC
Confidence 9999998 999 889997544 345566777772 22221 145789999888766655443321 11122111
Q ss_pred ------------------CC----CCceEEEEEEccchhhhheeee
Q 016111 363 ------------------GE----GLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 363 ------------------G~----~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+. +.+++|..+||-|..-++++|+
T Consensus 360 t~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 360 TLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 00 0156888999999988888875
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=2e-11 Score=122.34 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++..+. ..+..+..++..+|++... +++.++.+|++++.|+..|.++|+
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~-P~~tV~~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVSRACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCC-cceeehhhhHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999987652 2244666788999998533 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.||+++.|++|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999998874
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-11 Score=120.85 Aligned_cols=254 Identities=17% Similarity=0.172 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------V----DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lgl 150 (395)
...|+..|+++||+++|+++++++ .+++++... + ..+ ..+.+|+..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 478999999999999999987776 455544321 0 112 467889999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------cc----------CCCCCCCchhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TF----------RGPSDANLGCL 209 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~----------~~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|.++.+||+++|.... .+ ..|.|. .
T Consensus 152 ~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~----~ 224 (406)
T PRK08439 152 KGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDK----D 224 (406)
T ss_pred CCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccC----C
Confidence 975 5778899999999999999999999999999999996311 00 112222 1
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+.. ..+....-++...+.. . + +.++. .+. .+...++++++|
T Consensus 225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~----~-d---------~~~~~-~p~-----~~~~~~a~~~al 284 (406)
T PRK08439 225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES----G-D---------ANHIT-SPA-----PEGPLRAMKAAL 284 (406)
T ss_pred CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc----C-C---------CCCCC-CCC-----HHHHHHHHHHHH
Confidence 247899999999999975431 0001112233322210 0 0 00000 011 124457888999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+ ++| ++-.|-.+.+ -.+.+.+.++-.....+.+ .+-..+||+.+|+-.+.+...+.. .+++.+.|
T Consensus 285 ~~ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~-l~~~~ipp 359 (406)
T PRK08439 285 EMAGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMA-MRDGILPP 359 (406)
T ss_pred HHcCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHH-HhCCeeCC
Confidence 99986 466 8888875543 3455566666432222221 134569999999977765443221 11132111
Q ss_pred -----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 -----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+ .+...+|.-+||.|.+-++++|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 360 TINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 0 012568889999999999999874
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=121.97 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+..|++++|++ +|+++++||.||+++..+ ...+..+..+...+|++... +++.++++|+|++.|+.+|.++
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v-p~~tV~~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV-PGSTINRLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEeccchhHHHHHHHHHHH
Confidence 3789999999999997 599999999999998775 22367889999999999754 4899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999885
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-11 Score=120.64 Aligned_cols=94 Identities=16% Similarity=0.065 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.|++++..+ ...+..+..++..+|++... +.+.++.+|++++.++..|.++|+
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~-p~~~v~~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGV-TKYTVNVVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCC-cceeeechhhHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999887654 22234567789999998532 277888999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.||+++.|++|
T Consensus 104 sG~~d~vla~G~e~ms 119 (388)
T PRK06366 104 LGERDLVIAGGMENMS 119 (388)
T ss_pred cCCCCEEEEEeeEccc
Confidence 9999999998889876
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-11 Score=122.68 Aligned_cols=259 Identities=13% Similarity=0.086 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-----CCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSK-----SQITHLIFCSLVG-V-------------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~-----~~Id~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lg 149 (395)
...|+..|+.+||+++|+++ .+...|+++++.+ . ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 45799999999999999854 2456788876532 1 011 24678999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc---------------c-------cCCCCCCCch
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG---------------T-------FRGPSDANLG 207 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~---------------~-------~~~~~~~~~~ 207 (395)
+... .+.+..+|++++.||..|..+|++|.++.+||.++|.... . ...|.+.
T Consensus 173 l~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~--- 246 (437)
T PLN02836 173 FQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC--- 246 (437)
T ss_pred CCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc---
Confidence 9875 6889999999999999999999999999999999886321 0 0112221
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
...++++||||+++||++.+.. ..+.....++...+.. ++. .+ + . .+.. -.....+++++
T Consensus 247 -~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~----~d~-~~--~-------~-~p~~---~~~~~~~a~~~ 307 (437)
T PLN02836 247 -DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS----GDA-HH--I-------T-QPHE---DGRGAVLAMTR 307 (437)
T ss_pred -CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec----CCC-CC--C-------c-CCCc---chHHHHHHHHH
Confidence 1247899999999999975431 0001123344433211 000 00 0 0 0000 11234467889
Q ss_pred hhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcC
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g 358 (395)
+|+++|+++ +|| ++-.|-.+... .+.+.+.++-.. ..++.+ .+-..+||+.+|+-.+.|...+.. .+++
T Consensus 308 Al~~Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~~ 384 (437)
T PLN02836 308 ALQQSGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHHG 384 (437)
T ss_pred HHHHcCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-HhcC
Confidence 999999997 999 88899765432 333555554211 112211 134678999988877655443221 1113
Q ss_pred CccC----------------------CCCCceEEEEEEccchhhhheeeeec
Q 016111 359 KVTT----------------------GEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 359 ~i~~----------------------G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+-| ..+...+|.-+||.|.+-++++|+..
T Consensus 385 ~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 385 IAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred ccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 2111 00124567778999999999998764
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.9e-11 Score=117.34 Aligned_cols=259 Identities=14% Similarity=0.169 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHhCC---CCCCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQ---SKSQITHLIFCSLVG-V-------------------------DMP-GADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~---~~~~Id~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lgl~ 151 (395)
...|+..|+++||+++|+ +++.+. |++++..+ . .+| ..+.++...+|+.
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 456899999999999996 344444 44444421 0 111 3567788888888
Q ss_pred CccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c-CC-----CCCC-C-chhhhhhh
Q 016111 152 PSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------F-RG-----PSDA-N-LGCLAGQA 213 (395)
Q Consensus 152 ~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~-~~-----~~~~-~-~~~~~~~~ 213 (395)
.. .+.+..+|++++.||..|.++|++|..+.+|+.++|..... . .. |... + .+....++
T Consensus 162 G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~ 238 (418)
T PRK07910 162 AG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGF 238 (418)
T ss_pred CC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCE
Confidence 75 57789999999999999999999999999999999974210 0 10 1100 0 11123589
Q ss_pred hhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC
Q 016111 214 LFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG 292 (395)
Q Consensus 214 ~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 292 (395)
++|||++++||++.+.. ..+.....++...+... +|.++.. ... ......++++++|+++|
T Consensus 239 v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~--------------dg~~~~~-~~~---~~~~~~~a~~~Al~~ag 300 (418)
T PRK07910 239 VFGEGGALMVIETEEHAKARGANILARIMGASITS--------------DGFHMVA-PDP---NGERAGHAMTRAIELAG 300 (418)
T ss_pred eeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEec--------------CCCCCCC-CCC---CHHHHHHHHHHHHHHhC
Confidence 99999999999975431 10011223444332111 1100000 000 01124468899999999
Q ss_pred CCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 293 IKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 293 l~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
+++ +|| ++-.|-.+.+ -.+.+.+.+|-..-.+. + +-..+||+.+|+-.+.|...+.. .+++.+.|
T Consensus 301 i~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~li~~~l~-l~~~~ipp~~n~ 375 (418)
T PRK07910 301 LTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVESILTVLA-LRDGVIPPTLNL 375 (418)
T ss_pred CCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHHHHHHHHH-HhcCccCCCCCC
Confidence 997 999 8889976643 35566777773211122 2 46789999999887776543221 11122111
Q ss_pred -------------CC----CCceEEEEEEccchhhhheeeee
Q 016111 363 -------------GE----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -------------G~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+. +..+++.-+||.|.+-.+++|+.
T Consensus 376 ~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 376 ENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 00 12567888999999988888874
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=122.08 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++++|++ +|+++++||.|++++..+ ...+..+..+...+|++... +++.++++|++++.|+..|...
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV-PGTTVNRLCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEeechhhhHHHHHHHHHHH
Confidence 3789999999999995 699999999999998764 32356778899999998643 3889999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHCCCCCEEEEeccccccC
Confidence 9999999999999999874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.8e-11 Score=117.97 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.||+++..+ . ..+..+..+.-..|++... +++.++.+|+|++.|+..|.++|
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v-P~~tV~~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV-PGTSIDRQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEechhhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999987764 2 2234444444444776443 48899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+|+++.|++|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999874
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-11 Score=120.78 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++++|++ +|+++++||.|++++..+ .. .+..+..+...+|++... +++.++.+|++++.|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v-P~~tV~~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV-PGTTINRLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC-ceEEEecccccHHHHHHHHHHH
Confidence 3789999999999995 799999999999998765 22 356777899999997644 4899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999874
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.5e-11 Score=118.88 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=161.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-----------------C----C----C-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-----------------D----M----P-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-----------------~----~----p-~~a~~l~~~Lg 149 (395)
....|+..|+.+||+++|+++++++ .|+++++.+ + . . + ..+.+|+..+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 3567999999999999999876543 466665432 1 0 1 1 24678999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC---------CCCCCCchhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TFR---------GPSDANLGCL 209 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~---------~~~~~~~~~~ 209 (395)
+... ++.+..+|++++.||..|.++|++|. +.+|+.++|.... .+. .|.|. .
T Consensus 150 l~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~----~ 221 (399)
T cd00832 150 MRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDA----A 221 (399)
T ss_pred CCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcC----C
Confidence 9976 57889999999999999999999999 9999999987321 010 12221 1
Q ss_pred hhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++|+||+++||++.+... .+....-++...+....+.. ... ....+.++|+++|
T Consensus 222 ~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~----------------~~~-----~~~~~~~a~~~al 280 (399)
T cd00832 222 AAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPP----------------GSG-----RPPGLARAIRLAL 280 (399)
T ss_pred CCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCC----------------CCC-----CHHHHHHHHHHHH
Confidence 3589999999999999864320 00112234443332111100 000 0234567899999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT- 361 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~- 361 (395)
+++|+++ ++| ++..|-.+.. -.+.+.+.+|-. +++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 281 ~~ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~~ipp 355 (399)
T cd00832 281 ADAGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDGVIPP 355 (399)
T ss_pred HHcCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCCCcCC
Confidence 9999997 999 8889975543 345566667632 22221 134678999999998888764421 1112211
Q ss_pred ---------------------CCCCCceEEEEEEccchhhhheee
Q 016111 362 ---------------------TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 ---------------------~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+. ..++++..+||.|..-++++|
T Consensus 356 ~~n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 356 TVNVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 11 126788888998877766654
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-10 Score=115.13 Aligned_cols=248 Identities=15% Similarity=0.091 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------------------------CCC-
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------------------DMP- 138 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------------------~~p- 138 (395)
...|+..|+++||+++|++..+.+ .|+++++.+ . .+|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567999999999999999643322 345555432 1 011
Q ss_pred CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCCCCCCCc-h
Q 016111 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------TFRGPSDANL-G 207 (395)
Q Consensus 139 ~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~~~~~~~-~ 207 (395)
..+.+|+..+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|.... .+.......+ .
T Consensus 153 ~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 256788999999985 5788999999999999999999999999999999986321 0110000000 1
Q ss_pred h----hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHH
Q 016111 208 C----LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEK 282 (395)
Q Consensus 208 ~----~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 282 (395)
+ ...++++|+||+++||++.+.. ..+....-++...+....+ . -...+.+
T Consensus 230 d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~--------------------~-----~~~~~~~ 284 (398)
T PRK06519 230 SRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR--------------------R-----APGDLEA 284 (398)
T ss_pred ccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC--------------------C-----ChHHHHH
Confidence 1 1358999999999999986531 0001122344433211000 0 0113457
Q ss_pred HHHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 283 CLDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 283 ~i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
+|+++|+++|+ + +|| ++..|-.+.+. .+.+.+.+++|. . + +-..+||+.+|+-.+.+.-.+.. .+
T Consensus 285 am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pv---s-S--~Ks~~GH~l~AAGa~e~i~~~la-l~ 355 (398)
T PRK06519 285 SLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGPV---R-G--IGTLFGHTMEAQFPLGLALAALS-VS 355 (398)
T ss_pred HHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCc---c-c--cchhhccchHHHHHHHHHHHHHH-Hh
Confidence 89999999999 7 899 88999766443 555667777642 2 2 46789999999988877654432 11
Q ss_pred cCCccCCCC----------CceEEEEEEccchhhhheeee
Q 016111 357 EGKVTTGEG----------LEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 357 ~g~i~~G~~----------~d~vll~~~G~G~s~~a~ll~ 386 (395)
+|.+-|--+ ....|.+++|-|-.-|..+++
T Consensus 356 ~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 356 KGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred cCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 244432211 123677777766554555543
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7e-11 Score=117.18 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ ...+..+..+...+|++... +++.++.+|++++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~-p~~tV~~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV-PGQTVNRLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC-ceeeeechhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999998754 22355677788999998543 38899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999874
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-10 Score=116.97 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++..+. ..+..+..+.-..|++... +++.++++|++++.|+.+|..+|+
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~-p~~~V~~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVTRACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC-chhhhhhhhhHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999987652 2234555555557998443 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999973
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.1e-10 Score=112.92 Aligned_cols=253 Identities=18% Similarity=0.137 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C--------------------------CCC-CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V--------------------------DMP-GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~--------------------------~~p-~~a~~l~~~L 148 (395)
....|+..|++++|+++|+++.+.+ .|+++++.+ . ..+ ..+.+|+..+
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 3567899999999999998754332 355555321 0 111 3678899999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c-----------------CCCCCCCch
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----F-----------------RGPSDANLG 207 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----~-----------------~~~~~~~~~ 207 (395)
|++.. .+.+..+|++++.||..|..+|++|..+.+||.++|..+.. | ..|.+.+
T Consensus 150 ~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~-- 224 (406)
T PRK07967 150 KIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDAN-- 224 (406)
T ss_pred CCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCC--
Confidence 99986 57899999999999999999999999999999999864321 0 0122221
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..+++.|+||+++||++.+.. ..+.+...++...+... ++.++. .+. ...+.+++++
T Consensus 225 --r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~--------------d~~~~~-~p~-----~~~~~~a~~~ 282 (406)
T PRK07967 225 --RDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATS--------------DGYDMV-APS-----GEGAVRCMQM 282 (406)
T ss_pred --CCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECC--------------CCCCCC-CCC-----HHHHHHHHHH
Confidence 248999999999999975431 00011223444433211 111000 010 2334567888
Q ss_pred hhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
+|+..+ .|| ++..|-.+.+ -.+.+.+.+|-. .++.+ .+-..+||+.+|+-.+.|...+.. .+++.+
T Consensus 283 Al~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~la-l~~~~i 354 (406)
T PRK07967 283 ALATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLM-MEHGFI 354 (406)
T ss_pred HHhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHH-HhcCcC
Confidence 887644 267 8889975543 345566777632 21221 135689999999887766433221 111221
Q ss_pred cC---------C-------------CCCceEEEEEEccchhhhheeeeec
Q 016111 361 TT---------G-------------EGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 361 ~~---------G-------------~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
-| . .....++..+||.|.+-++++|+..
T Consensus 355 Ppt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 355 APSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 11 0 0125688899999999999998753
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.9e-11 Score=116.95 Aligned_cols=254 Identities=13% Similarity=0.089 Sum_probs=156.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|+++++||.|++++... ...+..+..+.-.+|++... +.+.++.+|++++.++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~-p~~~v~~acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV-PGVTVDRQCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC-ceeeecchhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999875422 11122334333456775433 36778999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc-cc-CC--------C-----CCCCchhhh---------------------------------
Q 016111 179 ENNPGARVLVVCSDLSLG-TF-RG--------P-----SDANLGCLA--------------------------------- 210 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~-~~-~~--------~-----~~~~~~~~~--------------------------------- 210 (395)
++|.++.|||++.|.++. .+ .. . .+..+.+..
T Consensus 104 ~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~ 183 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESH 183 (382)
T ss_pred HCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999986643 00 00 0 000000000
Q ss_pred --------------------------------------hhhhh-------------ccccEEEEEecCCCC-CCCCCCce
Q 016111 211 --------------------------------------GQALF-------------GDGAAALIIGANPDT-TLSEKPLF 238 (395)
Q Consensus 211 --------------------------------------~~~~f-------------GDgAaA~vl~~~~~~-~~~~~~~~ 238 (395)
...++ +|||+|+||.+.+.. ..+..+..
T Consensus 184 ~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~ 263 (382)
T PRK07801 184 RRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRA 263 (382)
T ss_pred HHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccE
Confidence 00111 355555555543210 00000111
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAK 317 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~ 317 (395)
++.+.. ....... .........++++++++|+++ +|| ++=+|-.-....-...+.
T Consensus 264 ~i~~~~---------------------~~~~~~~--~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~ 319 (382)
T PRK07801 264 RIHHLS---------------------VRGDDPV--FMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKE 319 (382)
T ss_pred EEEEEE---------------------EecCChH--hhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHH
Confidence 222110 0000000 011111357889999999997 999 888888776777777889
Q ss_pred cCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 318 LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 318 lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
||+.++++-.+ --.-.+||...|+-...+.++.++.. + .|. .+.+....|.|.+..+++|+.
T Consensus 320 lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~~--~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 320 TGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TGG--RYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred hCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cCC--CEEEEEEcccccceeEEEEEe
Confidence 99988776443 23566899999999998888887622 1 231 455555566566656666653
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-10 Score=113.90 Aligned_cols=95 Identities=7% Similarity=-0.010 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++.+|++ +|+++++||.|++++..+ .. .+..+..+.-..|++... +++.++.+|++++.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~-p~~tV~~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS-AAVTVNRLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc-chhhhhhhhHHHHHHHHHHHHH
Confidence 3789999999999996 599999999999997754 21 234556666677888754 4889999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999998874
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.9e-10 Score=112.05 Aligned_cols=93 Identities=18% Similarity=0.088 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.|++++... +........+.+.+|+++.+ +..++.+|++++.++..|...|+
T Consensus 26 ~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 26 GAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVA 103 (398)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999877543 21122236788899998643 77899999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.||++++|+++
T Consensus 104 sG~~d~vlv~G~e~~s 119 (398)
T PRK06157 104 SGAYDIALALGVEKLK 119 (398)
T ss_pred CCCCCEEEEEEEeecc
Confidence 9999999999999865
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-10 Score=106.10 Aligned_cols=247 Identities=15% Similarity=0.171 Sum_probs=137.7
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
|++....|..+|++.+|++++++++|||+++-+--.... -.+...++.|++| ++.+..+|+++..+|.+|..+
T Consensus 47 wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~--i~s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~ 119 (329)
T PF07451_consen 47 WEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI--ISSSFAARDLGIP-----FLGLYGACSTMMESLALAAML 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC--CHHHHHHHHHT-------EEEB--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh--HHHHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHH
Confidence 556678899999999999999999999999866543333 3568999999987 578899999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 178 AENNPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
+..|-.++||+.++-.... .|+.|.+.--+.+.+...---||+|+||++.... +...-.+.+..
T Consensus 120 vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~-----p~It~~T~GkV-------- 186 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSG-----PRITHATIGKV-------- 186 (329)
T ss_dssp HHTTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--S-----EEEEEEE------------
T ss_pred HhCCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCC-----cEEEEEEEEEE--------
Confidence 9999999999999888752 3554543221222345555679999999987653 12222222211
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
+++.+.+. +.||.- +.....+.|.+.|++.|.++ +|. .++-- ..+..+++.+.++-|++.++.+...-
T Consensus 187 vD~G~~D~---~nMGaA----MAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG 258 (329)
T PF07451_consen 187 VDMGIKDP---NNMGAA----MAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCG 258 (329)
T ss_dssp B-SS---T---T-HHHH----HHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHH
T ss_pred EEcCCCCc---ccchhh----HhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCC
Confidence 11111111 123222 22233456788899999997 888 66544 35678999999998988766322100
Q ss_pred --HH----Hh--cCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 331 --VL----SE--YGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 331 --~~----~~--~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
++ +. -|-.|++..-..+. +++++ .++|++ .+||+++.|+=+|
T Consensus 259 ~~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~-l~~g~~------krvL~vaTGALlS 309 (329)
T PF07451_consen 259 LMIYDPEKQDVHAGGSGCGCSAVVLCGYLLPK-LRKGEL------KRVLFVATGALLS 309 (329)
T ss_dssp HCSS-TT-S--TT-EESHHHHHHHHHHCHHHH-HHTTS-------SEEEEEEEEE---
T ss_pred eEeecCCccccccCCCCcchHHHHHHHHHHHH-HHcCCc------eEEEEEEchhhcC
Confidence 00 11 13444444444444 44443 222443 5899999997443
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-10 Score=113.28 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
..+|+..+++++|++ +|+++++||.|++++..+ .. .+..+..+...+|++... +++.++.+|++++.|+..|..+|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~-p~~~V~~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSV-PAVTVNRLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCC-cceeeechhHHHHHHHHHHHHHH
Confidence 789999999999996 799999999999987755 22 244567788899998533 37899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+|+++.|++|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998864
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-10 Score=112.44 Aligned_cols=92 Identities=14% Similarity=0.035 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHH-HHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGAD-YQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a-~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|++++|||.|++++... ...+..+ ..++..||+++.+ +..++.+|+++..|+..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHHH
Confidence 579999999999999999999999988765443 2222223 4467999998754 78899999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.|||++.|+.+
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999764
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.5e-10 Score=111.99 Aligned_cols=261 Identities=17% Similarity=0.139 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHHhCCC--CCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQS--KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~--~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|++ +++||.|++++............++++||+.+.+ ......||++...++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999987653322223458899999997654 44466788899999999999999
Q ss_pred cCCCCeEEEEEeeccccc---------------------------------cC------CCC------------------
Q 016111 180 NNPGARVLVVCSDLSLGT---------------------------------FR------GPS------------------ 202 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~---------------------------------~~------~~~------------------ 202 (395)
+|.++.|||+++|+.+.. +. .|.
T Consensus 105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~ 184 (498)
T PRK08257 105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP 184 (498)
T ss_pred CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence 999999999999975321 00 000
Q ss_pred -C---------------------------CCchhhh----------------hhh-hhccccEEEEEecCCCC-CCC--C
Q 016111 203 -D---------------------------ANLGCLA----------------GQA-LFGDGAAALIIGANPDT-TLS--E 234 (395)
Q Consensus 203 -~---------------------------~~~~~~~----------------~~~-~fGDgAaA~vl~~~~~~-~~~--~ 234 (395)
+ .+.++.. ... ...|||+|+||.+.+.. ..+ .
T Consensus 185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~ 264 (498)
T PRK08257 185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE 264 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence 0 0000000 011 25788888888764321 110 0
Q ss_pred CCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH
Q 016111 235 KPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 235 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
.....+...+....+.. +.. ..++. ....+..+.+++++++|+++ +|| .+=+|-.-......
T Consensus 265 ~~~V~i~g~a~~~~~~~-------~~~-------r~~~~--~~~~~~~aa~~a~~~AGi~~-~Did~~elydcF~~~~~~ 327 (498)
T PRK08257 265 DRWVYLHGGADAHDPYD-------ILE-------RPDLH--RSPAIRAAGRRALALAGLGI-DDIDAFDLYSCFPSAVQV 327 (498)
T ss_pred CceEEEEEEEEeeCccc-------ccc-------ccccc--cChHHHHHHHHHHHHhCCCH-HHCCEEEeccCCHHHHHH
Confidence 01222322221111100 000 00000 01123357889999999997 999 88888877777777
Q ss_pred HHHHcCCCcc-chhHH-HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhh-hheeeeec
Q 016111 314 IEAKLGLKQQ-KLSAT-RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTV-DTVVLRSF 388 (395)
Q Consensus 314 i~~~lgi~~e-~~~~~-~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~-~a~ll~~~ 388 (395)
..+.||+..+ +.+.| -.=+..+||.+.+.-+..+.++.++.. | +++ ...|+.+.|.-++. ...+|...
T Consensus 328 ~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~~ 398 (498)
T PRK08257 328 AARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYSTE 398 (498)
T ss_pred HHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeCC
Confidence 8899999765 22221 013567899999998888888777521 1 134 67777777743332 23344443
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-09 Score=104.82 Aligned_cols=229 Identities=17% Similarity=0.073 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHHHhC-CCC-CCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWG-QSK-SQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag-~~~-~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|+++||+++| +++ +|||.+++++...+ ........+++.||+...+ .+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHH
Confidence 378999999999999999 997 79999987542111 1111224577889985443 3433 88999999999999
Q ss_pred HHcCCCCeEEEEEeecccc--c------------cC-------------------------------------------C
Q 016111 178 AENNPGARVLVVCSDLSLG--T------------FR-------------------------------------------G 200 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~--~------------~~-------------------------------------------~ 200 (395)
|++|.+++|||++.++.+. . |. +
T Consensus 99 V~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~N 178 (385)
T PRK06066 99 INSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSN 178 (385)
T ss_pred HHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999986432 0 00 0
Q ss_pred CCC-----C------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 201 PSD-----A------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 201 ~~~-----~------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
|.- . ++-........+|||+|+||.+++.. ..+.. ...+...+....... .. ..
T Consensus 179 P~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~-pv~I~g~g~~~~~~~---~~----~~ 250 (385)
T PRK06066 179 PRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDD-PVWIKGIGWSTESSN---LE----TA 250 (385)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCC-CEEEEEEEEecCCcc---cc----cc
Confidence 100 0 00012334567899999999876431 11011 234544332110000 00 00
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCc--cc-------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIK--DWNSL-FWIVQPGGPAIVNQIEAKLGLKQ--QK------------- 324 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~hq~~~~~~~~i~~~lgi~~--e~------------- 324 (395)
.+. .......+.+++++++|++ + +|| .+-+|-......-...+.||+.+ +.
T Consensus 251 --------~~~--~~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G 319 (385)
T PRK06066 251 --------ELG--KANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQG 319 (385)
T ss_pred --------ccc--ccHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCC
Confidence 000 0111235788999999998 5 888 78888877666667788899865 22
Q ss_pred -hhHH-HHHHHhcCCCccchHHHHHHHHHHh
Q 016111 325 -LSAT-RHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 325 -~~~~-~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++.| .-=+-.+||...++-+..+.++.++
T Consensus 320 ~~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 320 ELPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred CccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 1111 0012347999988888888887664
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-09 Score=106.62 Aligned_cols=227 Identities=15% Similarity=0.120 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.++..+..+.. ....+++.||+...+ ...+..+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999997652221111 124599999997653 6778899999999999999999999
Q ss_pred CCCeEEEEEeeccccc------------------cC------------------------------------------CC
Q 016111 182 PGARVLVVCSDLSLGT------------------FR------------------------------------------GP 201 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~------------------~~------------------------------------------~~ 201 (395)
.++.|||++.|+.+.. +. +|
T Consensus 100 ~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP 179 (388)
T PRK08142 100 KCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNP 179 (388)
T ss_pred CCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCC
Confidence 9999999999874310 00 01
Q ss_pred CC-----CCch------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCc
Q 016111 202 SD-----ANLG------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMG 263 (395)
Q Consensus 202 ~~-----~~~~------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 263 (395)
.- .+.+ .+......+|||+|+||.+++.. .. ..+...+...+....+.. .. .
T Consensus 180 ~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l-~~~~v~I~g~~~~~~~~~-----~~-~--- 249 (388)
T PRK08142 180 HAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSL-KRPLVKVLGAGEAIKGQM-----GG-K--- 249 (388)
T ss_pred hhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhc-CCCCEEEEEEEEecCCcc-----cc-C---
Confidence 00 0000 11123456899999999976431 11 012344544432211100 00 0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-----------------ch
Q 016111 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-----------------KL 325 (395)
Q Consensus 264 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-----------------~~ 325 (395)
+++. ......+++++++++|+++ +|| .+=+|-.-........|.||+-+. ++
T Consensus 250 ------~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 250 ------VDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred ------cccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 0000 1112357889999999997 999 778888766666666788988432 12
Q ss_pred hHHH-HHHHhcCCCccchHHHHHHHHHHh
Q 016111 326 SATR-HVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 326 ~~~~-~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+.|. -=+...||...++-+..+.++.++
T Consensus 320 PvN~sGG~l~~G~p~gatG~~~~~E~~~Q 348 (388)
T PRK08142 320 PFNTDGGGLCNNHPANRGGMTKVIEAVRQ 348 (388)
T ss_pred cccCCChhhcCCCcCcccHHHHHHHHHHH
Confidence 2210 012346898888888888887665
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=115.37 Aligned_cols=95 Identities=14% Similarity=0.080 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++.++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~-p~~~v~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKV-PAWTVQRNCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCc-eeeeccchhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988775 33456778899999997432 278999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.+++||++++|++|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998764
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=113.20 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHH-HHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADY-QLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~-~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
.+.+|+.+|++++|+++|++|++||.||+++.++ +..+..+. .+++.+|+.+.+ +++++.+|++++.|+.+|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998877 43455555 378888987764 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+||+++|++|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999864
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-09 Score=124.19 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=142.2
Q ss_pred HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------cc-----CCCCC
Q 016111 140 ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TF-----RGPSD 203 (395)
Q Consensus 140 ~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~-----~~~~~ 203 (395)
.+.+|+..||+... .+.+..+|+|++.||++|.+.|++|.++.+|+.+++.... .+ ..|.|
T Consensus 185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 47899999999986 6889999999999999999999999999999999886321 01 01222
Q ss_pred CCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHH
Q 016111 204 ANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEK 282 (395)
Q Consensus 204 ~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 282 (395)
....++++|+|++++||.+-... .-+.+....+.+.+.. +++... .++. +. .....+
T Consensus 262 ----~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~----~DG~~~--------~ita-P~-----~~gq~~ 319 (2582)
T TIGR02813 262 ----IDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS----SDGKFK--------SIYA-PR-----PEGQAK 319 (2582)
T ss_pred ----CCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc----CCCCCC--------CCcC-CC-----HHHHHH
Confidence 22358999999999999975432 1001122334433311 101000 0000 11 122357
Q ss_pred HHHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 283 CLDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 283 ~i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+|+++|+++|+++ ++| |+-.|-.+... .+.+.+.++-.. ..++.+ .+-..+||+.+|+-...|-..+-.
T Consensus 320 ~i~~Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 320 ALKRAYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH
Confidence 8999999999998 999 88899765433 556677776432 122222 134689999999988888664321
Q ss_pred hhhcCCccC-------------------------------CCCCceEEEEEEccchhhhheeeeec
Q 016111 354 SAEEGKVTT-------------------------------GEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 354 ~~~~g~i~~-------------------------------G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+++.+-+ .....++++-+||.|.+-..++|+-.
T Consensus 398 -l~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 398 -LHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred -HhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 01122111 00124678889999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=106.26 Aligned_cols=264 Identities=17% Similarity=0.164 Sum_probs=161.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCC-CCCcC---EEEEEecCC-----------------------CC----CC-CHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQS-KSQIT---HLIFCSLVG-----------------------VD----MP-GADY 142 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~-~~~Id---~vi~~s~t~-----------------------~~----~p-~~a~ 142 (395)
.+.+......|+..|+++||+++|++ ..+++ .++++|..+ +. +| ..+.
T Consensus 64 ~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (412)
T COG0304 64 ERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAG 143 (412)
T ss_pred HhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHH
Confidence 33366678899999999999999997 33442 334444421 01 12 3567
Q ss_pred HHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-cc--------------cc------cCCC
Q 016111 143 QLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SL--------------GT------FRGP 201 (395)
Q Consensus 143 ~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s--------------~~------~~~~ 201 (395)
.++..+|+... .+.+..+|+++..|+..|.++|+.|..+.+++.++|. .+ .. ...|
T Consensus 144 ~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrP 220 (412)
T COG0304 144 NVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRP 220 (412)
T ss_pred HHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCC
Confidence 89999999976 5778999999999999999999999999999999977 22 21 1223
Q ss_pred CCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceE-EecCceEEEeCchhHHHHHHH
Q 016111 202 SDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQ-FREMGLTVHLSKNVATVVSEN 279 (395)
Q Consensus 202 ~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~g~~~~~~~~v~~~~~~~ 279 (395)
.+.++ .++++|+||+++||+..+... .+-+..-++...+... +..+.. ..++| +.
T Consensus 221 fd~~R----dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~-----Da~h~t~P~p~g--------------~G 277 (412)
T COG0304 221 FDKNR----DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTS-----DAYHITAPAPDG--------------EG 277 (412)
T ss_pred CCCCC----CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecc-----cccccCCCCCCC--------------ch
Confidence 33322 489999999999999865321 0011234444433210 110000 00111 12
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..++|+.+|+++|+++ +|| |+-.|-.+.+.. +.+.+.+|--..+++.+ .+-..+||+-.|.-.+-+.-.+..
T Consensus 278 a~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~l~ 355 (412)
T COG0304 278 AIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISLLA 355 (412)
T ss_pred HHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHHHH
Confidence 3368899999999998 999 999997665443 33445566322222221 135667888776654443322211
Q ss_pred hhhcCCccC------CC----------------CCceEEEEEEccchhhhheeeee
Q 016111 354 SAEEGKVTT------GE----------------GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 354 ~~~~g~i~~------G~----------------~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.++|.+.| .+ ..+.+|.-+||-|.+-++++++.
T Consensus 356 -l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 356 -LRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred -HhcCCcCCCCCcCCCCcccccccccCCcccccceeEEEecccccCCcceEEEEec
Confidence 00011111 00 01456777888888888777764
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.6e-10 Score=104.80 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++.+|+++++++++||.|++++..+ ...+..+..+.-..|++... +.+.++..|+|++.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~v-p~~~V~~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESV-PATTVNRACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTS-EEEEEE-GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccccccc-ceeeehhhhhHHHHHHHHhhhhhc
Confidence 4889999999999999999999999999999988 44666788888889998765 488999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+|++++|++|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999996
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-08 Score=100.30 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.+++.+. ...+. ..+++.||+.+.. +...+..+|+++..+|..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~--~~l~~~lGl~~~~-~~~~v~~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DTNPE--IAVARALGIGELK-FFSRIHYGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--ccccH--HHHHHHCCCCCCc-ceeeecCCcHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999986432 12222 5688999997622 25678899999999999999999999
Q ss_pred CCCeEEEEEe
Q 016111 182 PGARVLVVCS 191 (395)
Q Consensus 182 ~~~~vLvv~~ 191 (395)
.++.|||++.
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.1e-09 Score=95.17 Aligned_cols=93 Identities=18% Similarity=0.124 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+.+|+.-|++.+|++++++++|++-||++...+ ......+.+.+---||+..+ ++..+|..|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv-~~tTvNkvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV-PATTVNKVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce-eeEeehhhhhhhHHHHHHHHHHHhc
Confidence 789999999999999999999999999998877 55556778888778899876 4899999999999999999999999
Q ss_pred CCCCeEEEEEeeccc
Q 016111 181 NPGARVLVVCSDLSL 195 (395)
Q Consensus 181 g~~~~vLvv~~d~~s 195 (395)
|..+.|+..+.|.+|
T Consensus 109 G~~divVaGGmEsMS 123 (396)
T KOG1390|consen 109 GHADIVVAGGMESMS 123 (396)
T ss_pred CCccEEEecccchhc
Confidence 999999999999987
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-08 Score=99.80 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC--cCEEEEEecCC-C--CCCCHHHHHHHHcCCC-------CccccceecCccchhHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQ--ITHLIFCSLVG-V--DMPGADYQLTKMLGLN-------PSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~--Id~vi~~s~t~-~--~~p~~a~~l~~~Lgl~-------~~~~~~~~i~~~C~~~~ 168 (395)
+..+|+.+|++++|+++|++++| ||.|++++..+ . ..+..+..+...+|++ ..+ ++.++.+|++++
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~ 124 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGG 124 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHH
Confidence 37899999999999999999999 99999987654 2 2345566777565554 443 788999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeecccc
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~ 196 (395)
.|+..|.++|++|.++.||++++|++|.
T Consensus 125 ~Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 125 LAVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999999998764
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.6e-07 Score=87.36 Aligned_cols=238 Identities=16% Similarity=0.012 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
.+|+.+|+++||+++|++++|||.++.++...+.. ......+...+|+.... +...+. +++..++..|...|++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~v~---~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPI-NESHVE---MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCC-ceEEec---CcHHHHHHHHHHHHhcC
Confidence 79999999999999999999999886433211211 11223455677874321 133333 46888999999999999
Q ss_pred CCCeEEEEEeeccccc-------------cCCCCC---------------------------------------------
Q 016111 182 PGARVLVVCSDLSLGT-------------FRGPSD--------------------------------------------- 203 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-------------~~~~~~--------------------------------------------- 203 (395)
.++.|||++.|+.+.. +..|..
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 9999999999975310 000100
Q ss_pred CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCc
Q 016111 204 AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSK 270 (395)
Q Consensus 204 ~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 270 (395)
.+ +-.+......+|||+|+||.+.+.. ..+. ....+.+.+....+.. ... +
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~-~pv~I~g~~~~~~~~~-------~~~--------~ 244 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRE-RPAWITGIEHRIESPS-------LGA--------R 244 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCC-CcEEEEEEEEeeCCcc-------ccc--------c
Confidence 00 0011123345899999999875431 1101 1244444332211110 000 0
Q ss_pred hhHHHHHHHHHHHHHHhhcc-CCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHH
Q 016111 271 NVATVVSENIEKCLDEAFSP-FGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 271 ~v~~~~~~~~~~~i~~~L~~-~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
++.. . ..++.++++ +|+++ +|| .+=+|-......-...+.||+.. .++-.+=..+ . ||-..++-...+
T Consensus 245 d~~~--~----~~~~~a~~~aAgi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l-~-ghp~gatG~~~~ 315 (352)
T PRK07937 245 DLTR--S----PSTALAAEAATGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGAL-A-ANPMFAAGLERI 315 (352)
T ss_pred cccc--H----HHHHHHHHHhcCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccch-h-cCchhHHHHHHH
Confidence 0100 1 112233333 69997 999 78888877777777789999843 2333321124 3 888777778888
Q ss_pred HHHHHhhhhcCCccCCCCCceEEEEEEcc
Q 016111 348 DEIRRKSAEEGKVTTGEGLEWGVMFGIGA 376 (395)
Q Consensus 348 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~ 376 (395)
.++..+ ++.+ +.++.|..+.|.
T Consensus 316 ~e~~~Q------L~g~-~a~~~l~~~~Gg 337 (352)
T PRK07937 316 GEAARH------IWDG-SARRALAHATSG 337 (352)
T ss_pred HHHHHH------Hhcc-CCCEEEEecccc
Confidence 887765 2211 126677777664
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.3e-08 Score=89.82 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=86.1
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCc-----CEEEEEecCC-C-----------------------CCC-CHHHHHHHHcC
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQI-----THLIFCSLVG-V-----------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~I-----d~vi~~s~t~-~-----------------------~~p-~~a~~l~~~Lg 149 (395)
.....|+..|+.+||+++|+++.++ -.|+++++.+ + ..| ..+.+|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 3567899999999999999988532 2355555543 1 022 25779999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-ccc---------ccCCCCCC-C-chhhhhhhhhcc
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SLG---------TFRGPSDA-N-LGCLAGQALFGD 217 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s~---------~~~~~~~~-~-~~~~~~~~~fGD 217 (395)
++.. .+.+..+|++++.||..|..+|++|..+.+||.++|. .+. ........ . .+....++++|+
T Consensus 165 l~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gE 241 (254)
T PF00109_consen 165 LRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGE 241 (254)
T ss_dssp B-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-
T ss_pred CCCc---cccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEEC
Confidence 9986 5789999999999999999999999999999999994 331 01111100 0 011125899999
Q ss_pred ccEEEEEecC
Q 016111 218 GAAALIIGAN 227 (395)
Q Consensus 218 gAaA~vl~~~ 227 (395)
||+++||++.
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999864
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-07 Score=94.61 Aligned_cols=95 Identities=9% Similarity=0.017 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++..+ ...+..+..+.-..|++... +++.++++|++++.++..|..+|+
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~-p~~~V~~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT-PAYDLQQACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC-ceeeeechhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999997654 11233556655555665433 378899999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+|+++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999999874
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.9e-08 Score=89.76 Aligned_cols=211 Identities=16% Similarity=0.171 Sum_probs=134.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCC---CcC----EEEEEec----------------------CCCCCC-----CHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKS---QIT----HLIFCSL----------------------VGVDMP-----GADYQLTK 146 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~---~Id----~vi~~s~----------------------t~~~~p-----~~a~~l~~ 146 (395)
....|+..|+++||+++++.+. +.| .|.+++. +||++| -.+.+|..
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4578999999999999998765 223 5565665 344455 24689999
Q ss_pred HcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc---------------------cCCCCCCC
Q 016111 147 MLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT---------------------FRGPSDAN 205 (395)
Q Consensus 147 ~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~---------------------~~~~~~~~ 205 (395)
++|+... ...++.+|+.+..++--|.++|+.|..+..|.-++|.+-.. ...|.|..
T Consensus 173 ~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 9999875 47789999999999999999999999998888888875310 11233332
Q ss_pred chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccce-EEecCceEEEeCchhHHHHHHHHHHH
Q 016111 206 LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAG-QFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 206 ~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
+ .++++|+|++.+||+.-+.. ..+.....++...+- +.+..+. ...++| .....+
T Consensus 250 R----dGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl-----s~Da~HiT~P~~dG--------------~Ga~~a 306 (440)
T KOG1394|consen 250 R----DGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-----SSDAYHITSPDPDG--------------AGAVLA 306 (440)
T ss_pred C----CceeeccceeEEehHhHHHHHHcCCceeHHhhcCcc-----cccccccCCCCCCc--------------chHHHH
Confidence 2 48999999999999864431 000011223332221 0011100 011222 123357
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccc--hhHHHHHHHhcCCCccc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQK--LSATRHVLSEYGNMGGV 341 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~--~~~~~~~~~~~Gn~~sa 341 (395)
|+++|+++|+++ +|| |+--|..+... .+++.+.|+-.... +.. +-...||+-.|
T Consensus 307 m~raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsS---tKgaiGHLLGA 368 (440)
T KOG1394|consen 307 MERALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSS---TKGAIGHLLGA 368 (440)
T ss_pred HHHHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCccccccc---ccchhhhhccc
Confidence 889999999998 999 88888765433 44455555543332 322 35566776444
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=3e-06 Score=93.61 Aligned_cols=264 Identities=18% Similarity=0.208 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CCCC-------------------CHHHHHHHHcCCCCccccce
Q 016111 103 PKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VDMP-------------------GADYQLTKMLGLNPSVKRVM 158 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~~p-------------------~~a~~l~~~Lgl~~~~~~~~ 158 (395)
--|..+.+.++|+++|+.++.+. .|+.+.+.. |... -.+.+|+..|++... .+
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GP---s~ 168 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGP---SV 168 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCC---Cc
Confidence 34888889999999999999888 566655554 4211 167899999999985 57
Q ss_pred ecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c-----CCCCC--CCchhhhhhhhhccccEEEEEec
Q 016111 159 LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----F-----RGPSD--ANLGCLAGQALFGDGAAALIIGA 226 (395)
Q Consensus 159 ~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~-----~~~~~--~~~~~~~~~~~fGDgAaA~vl~~ 226 (395)
.+..+|++.+.|+++|.+.|++|.++.+|+-++...... | ..|+- ...+....+++.|+|++++||.+
T Consensus 169 ~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKr 248 (1061)
T COG3321 169 TVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKR 248 (1061)
T ss_pred cccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEE
Confidence 899999999999999999999999999999888764210 0 01110 00122245889999999999987
Q ss_pred CCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc
Q 016111 227 NPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ 304 (395)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h 304 (395)
-.... -++ ..+.+.... .... +|... |-..+. ...-.++++++|+++|+.+ .+| |+=.|
T Consensus 249 l~~A~~dgd-~IyavI~gs-avn~------------dG~~~--gltaP~--~~aQ~~v~~~al~~a~i~p-~tv~yvEaH 309 (1061)
T COG3321 249 LSDAERDGD-RIYAVIRGS-AVNQ------------DGRSN--GLTAPN--LEAQADVIREALADAGIDP-ATVQYVEAH 309 (1061)
T ss_pred hHHHHhCCC-eEEEEEEee-eecc------------CCCcC--CCCCCC--HHHHHHHHHHHHHhcCCCc-ccCcEEEec
Confidence 54321 001 123322111 1111 11000 001111 2344578999999999998 999 88888
Q ss_pred CCChH-----HHHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----------------
Q 016111 305 PGGPA-----IVNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---------------- 362 (395)
Q Consensus 305 q~~~~-----~~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---------------- 362 (395)
..+.. -+..+.+.++-.. +....--.+-..+||+.+|.-...|-...-. .+++.+.+
T Consensus 310 gTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~~~~~np~i~~~~s 388 (1061)
T COG3321 310 GTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLHFDTPNPEIDFDSS 388 (1061)
T ss_pred CCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCCCCCCCcCCccccC
Confidence 75543 3555556655332 2211111245778999988887777664432 11233222
Q ss_pred -------------CCCCceEEEEEEccchhhhheeeeecC
Q 016111 363 -------------GEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 363 -------------G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
....-+.-+-+||.|.+-.-++++.-+
T Consensus 389 p~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 389 PFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 101245677888888888888887543
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.9e-05 Score=72.08 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHH-cCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKM-LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~-Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+-+|...+.+..+++.+++|+.|.-|+++++..--.-...++++.. -|++..+ ++..++-.|++++.|+.....-|++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tv-pv~tvNRqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCccc-chhhhhhhhhhHHHHHHHHHHHHhc
Confidence 5578888999999999999999999999998641111445555554 4788776 4788999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc
Q 016111 181 NPGARVLVVCSDLSLGT 197 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~ 197 (395)
|.++..|-.+.|.++..
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99999999999998753
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.9e-05 Score=77.05 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHh--CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEW--GQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~a--g~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
..++.....+..+++. ++++.+||.+++++..+ ......+..++..+|++... +.+.++.+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~-p~~~V~~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSV-PAVTVNRACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCC-CceEEeccchhHHHHHHHHHHH
Confidence 4455555555555433 57777889999987776 35667889999999999733 3899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999986
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=5.1e-05 Score=68.97 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
-.||+.+|..++|+++++.-++|+--+++=..+. .....+..-++|+..-+ .+.++++|+++..||-+|+++|++|
T Consensus 29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406|consen 29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence 5789999999999999999888874333222111 11234555588999875 8999999999999999999999999
Q ss_pred CCCeEEEEEeecccc
Q 016111 182 PGARVLVVCSDLSLG 196 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~ 196 (395)
..+.||..+-|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999863
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00079 Score=61.18 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|..-|++.+|+.+++.++.+|.||++.... ...--++..+.-+.|.+... +...++.=|.+++.++..+.+-|
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~-pALtiNRLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET-PALTINRLCGSGFQSIVNGAQEI 105 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc-CceeehhhhcccHHHHHhhHHHh
Confidence 4789999999999999999999999999876542 11111234455555666665 48899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
.-|..+.||.-+.|.+|.
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999999999999999883
|
|
| >PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0036 Score=59.03 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=39.6
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.-+++||++++|+++.|..++.... ...-.| ++|+|.++|+|......-+++.+
T Consensus 150 ~~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~~s~~fs~~v~~ 203 (282)
T PF08540_consen 150 YSRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGLASEFFSGRVQP 203 (282)
T ss_dssp HHHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTTEEEEEEEEE-T
T ss_pred HHHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCcceeEEEEEEeC
Confidence 4578999999999999999993211 334468 89999999999998877777665
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A .... |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0048 Score=66.76 Aligned_cols=260 Identities=19% Similarity=0.215 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC---C---CCC---------CH-HHHHHHH----cCCCCccccc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG---V---DMP---------GA-DYQLTKM----LGLNPSVKRV 157 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~---~---~~p---------~~-a~~l~~~----Lgl~~~~~~~ 157 (395)
...|..++..+|+-++|+.|.++. .+....+.+ . ..| +. -...+.+ +.+... .
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP---S 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP---S 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---c
Confidence 567889999999999999998765 333332221 1 112 11 1222333 334433 5
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----cc-----CCCCC--CCchhhhhhhhhccccEEEEEe
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----TF-----RGPSD--ANLGCLAGQALFGDGAAALIIG 225 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----~~-----~~~~~--~~~~~~~~~~~fGDgAaA~vl~ 225 (395)
+.+..+|++.+.||+.|.+-+++|.++.+||.++..... .| ..|.- ...+....+..=+||.+|++|.
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQ 243 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEe
Confidence 677899999999999999999999999999998876432 11 11110 0112223456678999999998
Q ss_pred cCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc
Q 016111 226 ANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ 304 (395)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h 304 (395)
+..... +....+.+..+ .+++ +.++|..|-.|+ .-.+.+++..+++|+.| +++ |+=.|
T Consensus 244 rk~~Ar---RvYAtilnart----NTDG-----fKEqGvTfP~G~--------~Q~qLi~e~Yse~Gl~P-~sv~YvEAH 302 (2376)
T KOG1202|consen 244 RKSLAR---RVYATILNART----NTDG-----FKEQGVTFPSGD--------MQEQLIRETYSEAGLNP-ESVVYVEAH 302 (2376)
T ss_pred hhHHHH---HHHHHhhcccc----CCCc-----hhhcCccCCCcH--------HHHHHHHHHHHhcCCCc-ccEEEEEec
Confidence 865421 01222222211 1111 222343222222 12367889999999998 999 77788
Q ss_pred CCChHH-----HHHHHHHcCCCcc-c-hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC---------------
Q 016111 305 PGGPAI-----VNQIEAKLGLKQQ-K-LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT--------------- 362 (395)
Q Consensus 305 q~~~~~-----~~~i~~~lgi~~e-~-~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~--------------- 362 (395)
..+.++ ...+.+.+=-++. . +.-+ +-...||.-.||-.-+|+..+-. .++|-+.|
T Consensus 303 GtGTkVGDpQEaN~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~ 379 (2376)
T KOG1202|consen 303 GTGTKVGDPQEANGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV 379 (2376)
T ss_pred cCCCCCCChHHhhhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence 755432 3334333221111 1 1112 34678888888888888876543 22243322
Q ss_pred --------------CCCCceEEEEEEccchhhhheeeeecCCC
Q 016111 363 --------------GEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391 (395)
Q Consensus 363 --------------G~~~d~vll~~~G~G~s~~a~ll~~~~~~ 391 (395)
| ..|-+-+||-|.+-.-++|+-.+-|
T Consensus 380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~~~~ 419 (2376)
T KOG1202|consen 380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSNTKP 419 (2376)
T ss_pred cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccCCCC
Confidence 3 4677888999988888999877544
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0012 Score=60.95 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
.+.+|+.+|...+|++..++.+.||+||++|... --....+...+-.-|.++.. +...+.++|-+.-.|+.....+|.
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdkt-pahtvtmacissn~amttgmglia 143 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKT-PAHTVTMACISSNVAMTTGMGLIA 143 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCC-ccceeeeehhccchhhhccceeEe
Confidence 4789999999999999999999999999999765 22334555555566888765 488899999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.++.-+.|.+|.
T Consensus 144 tg~~dvivaggvelmsd 160 (465)
T KOG1392|consen 144 TGNADVIVAGGVELMSD 160 (465)
T ss_pred eCCcCEEEEcceeeccc
Confidence 99999888888898874
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.045 Score=49.67 Aligned_cols=114 Identities=20% Similarity=0.073 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC----------------CCC---------CHHHHHHHHcCCCCcccc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV----------------DMP---------GADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~----------------~~p---------~~a~~l~~~Lgl~~~~~~ 156 (395)
...|++.++.+++++. +++|.+||+|..+. ..| ..+.++.-..|....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~--- 106 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP--- 106 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc---
Confidence 6778888888888653 57889999998651 122 234555666665543
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
...+..+-.++..||.-|..++..| .+.||||+.|........... . ......--|.|++|++++.
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~---~---~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFR---P---ERDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcc---c---ccCCCcCEEEEEEecCCCC
Confidence 5667888899999999999999999 899999999997653221110 0 0112244678888887655
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.021 Score=47.01 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=64.0
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
.+++++|+++|++. +|+ .|=.|-+-....-...+.||++++++-.+ --.-.+||-.++|-...+.+++.+...
T Consensus 26 ~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~-GG~la~GHP~gasG~r~~~~l~~~L~~---- 99 (123)
T PF02803_consen 26 PAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPN-GGALALGHPLGASGARLVVELAHQLRR---- 99 (123)
T ss_dssp HHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCcc-cccccccccccccccchhhhhHHHHHH----
Confidence 57789999999997 999 88899988887788889999999987663 234458999888888777777665221
Q ss_pred cCCCCCceEEEEEEccchhhhheeee
Q 016111 361 TTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 361 ~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+.| ++.+...-++|..-.+++++
T Consensus 100 ~~~---~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 100 RGG---RYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp HTT---SEEEEEEEETTTEEEEEEEE
T ss_pred hch---hhhhHHhcccceeeEEEEEE
Confidence 124 55555444444444556665
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.094 Score=52.80 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=64.5
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
...+..+|||+|+||.+.+.. ..+..+..++.+...... ...... .....+++++|
T Consensus 261 ~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~--------------------~~~~~~---~~~~~a~~~al 317 (426)
T PRK08170 261 GNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAAL--------------------DPSQMG---LGPVHAATPLL 317 (426)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeee--------------------Cchhhc---ccHHHHHHHHH
Confidence 346678999999999976431 110122334433221100 000110 11236788999
Q ss_pred ccCCCCCCCce-EEEEcCCChHH-HHHHH--HHcC--------------CCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPAI-VNQIE--AKLG--------------LKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~~-~~~i~--~~lg--------------i~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+++|+++ +|| .+=+|-.-... +-.+. +.+| ++.+++-.+ --.-.+||...|+-...+.++
T Consensus 318 ~~aGl~~-~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GHP~GAtG~~~~~~l 395 (426)
T PRK08170 318 QRHGLTL-EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGHPVGASGARIVLHL 395 (426)
T ss_pred HHcCCCH-HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCCCccCccHHHHHHH
Confidence 9999997 999 88788765432 21111 2222 344444332 123458999888885555555
Q ss_pred HHh
Q 016111 351 RRK 353 (395)
Q Consensus 351 ~~~ 353 (395)
.+.
T Consensus 396 ~~~ 398 (426)
T PRK08170 396 LHA 398 (426)
T ss_pred HHH
Confidence 543
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.052 Score=41.83 Aligned_cols=74 Identities=23% Similarity=0.177 Sum_probs=44.2
Q ss_pred HHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHHHcCCCCeEEEE
Q 016111 114 IKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFAENNPGARVLVV 189 (395)
Q Consensus 114 L~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll~~g~~~~vLvv 189 (395)
|+++|++++|||.++....+ ......+.+++|++..-. ...+ +.+|++...+|..+..-=+-.+.+++|++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999999975533 234466889999986631 1222 45666666666554442122256788888
Q ss_pred Eee
Q 016111 190 CSD 192 (395)
Q Consensus 190 ~~d 192 (395)
+.-
T Consensus 76 ~~G 78 (90)
T PF08541_consen 76 GFG 78 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.47 Score=47.96 Aligned_cols=71 Identities=18% Similarity=0.155 Sum_probs=53.0
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------chhHHHHHHHhcCCCccc
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------------------KLSATRHVLSEYGNMGGV 341 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------------------~~~~~~~~~~~~Gn~~sa 341 (395)
..+++++++++|+++ +|| .+=+|-.-....-...+.||+.+. ++-.+ -=+-.+||-..+
T Consensus 312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA 389 (438)
T PTZ00455 312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA 389 (438)
T ss_pred HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence 467889999999997 999 888888876767777889998762 33221 124558999988
Q ss_pred hHHHHHHHHHHh
Q 016111 342 SVFFILDEIRRK 353 (395)
Q Consensus 342 s~~i~L~~~~~~ 353 (395)
+-...+.++..+
T Consensus 390 tG~~~v~e~~~Q 401 (438)
T PTZ00455 390 TGVKQIMEVYRQ 401 (438)
T ss_pred HHHHHHHHHHHH
Confidence 888877777664
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.52 Score=46.63 Aligned_cols=90 Identities=8% Similarity=0.018 Sum_probs=58.9
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHc-----CCCCcccc-ce-ec-CccchhHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKML-----GLNPSVKR-VM-LY-FQGCYIGAT 169 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~L-----gl~~~~~~-~~-~i-~~~C~~~~~ 169 (395)
+.+.......++++++|+++|++++|||.++....+. ..-..+.++| |++.+-.+ .+ .+ |.+|++...
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~----~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi 341 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSE----YFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYI 341 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccH----HHHHHHHHHHHhccCCCChhheEEeccccccccchHHHH
Confidence 3344556668899999999999999999999644322 2345667766 78754210 11 12 567777777
Q ss_pred HHHHHHHHHHcC---CCCeEEEEEeecc
Q 016111 170 AIRMAKDFAENN---PGARVLVVCSDLS 194 (395)
Q Consensus 170 aL~~A~~ll~~g---~~~~vLvv~~d~~ 194 (395)
+|..+. ++| +.++|++++++..
T Consensus 342 ~L~~a~---~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 342 MLDELL---NSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHH---HcCCCCCCCEEEEEEeccc
Confidence 886553 333 4578888876654
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.37 Score=47.08 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e---ec-CccchhHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV-M---LY-FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~-~---~i-~~~C~~~~~aL~~A~~l 177 (395)
...+.++++++|+++|++++|||.+++..... ..-..+.++||++..-.+. + .+ |.++++...+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~----~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG----KFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh----HHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 44456889999999999999999999744322 2445689999998642111 1 22 56788888888766553
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
++ +.++||+++
T Consensus 283 ~~--~Gd~vll~~ 293 (345)
T TIGR00748 283 AE--PGDRILAVS 293 (345)
T ss_pred cC--CCCEEEEEE
Confidence 33 346777666
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.76 Score=46.31 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=54.2
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHH-HHHH--HHHcCC--------------CccchhHHHHHHHhcCCCccchH
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAI-VNQI--EAKLGL--------------KQQKLSATRHVLSEYGNMGGVSV 343 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~-~~~i--~~~lgi--------------~~e~~~~~~~~~~~~Gn~~sas~ 343 (395)
.+++++++++|+++ +|| .+=+|-.-... +-.+ .+.+|+ +..++-.+ --.-.+||...|+-
T Consensus 313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~-GG~la~GhP~gATG 390 (427)
T PRK09268 313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVN-GSSLAAGHPFAATG 390 (427)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCC-cCHHhcCCCcccch
Confidence 47788999999997 999 77777764433 2222 133333 22222221 11234799988888
Q ss_pred HHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 344 FFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 344 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
...+.++..+.. + +.| .+.|...-++|..-.+++|+
T Consensus 391 ~~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 391 GRIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred HHHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence 777777766521 1 123 45555444444444456654
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.75 Score=44.59 Aligned_cols=85 Identities=21% Similarity=0.226 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--cCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VML--YFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~--i~~~C~~~~~aL~~A~~l 177 (395)
.......++.+++|+++|++++|||.+++.... +..-..+.++||++..-.+ .+. -|.++++...+|..+
T Consensus 236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~----~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~--- 308 (338)
T PRK09258 236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG----AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA--- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC----HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence 345566778999999999999999998865432 2344688999999864210 111 144555666666544
Q ss_pred HHcC---CCCeEEEEEee
Q 016111 178 AENN---PGARVLVVCSD 192 (395)
Q Consensus 178 l~~g---~~~~vLvv~~d 192 (395)
++.| +.+++|+++.-
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 3333 45778877744
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.67 Score=44.48 Aligned_cols=81 Identities=16% Similarity=0.072 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
..-..++++++|+++|++++|||.+++... .+..-..+++.||++..-. ...+ +.++++.+.+|..+ +
T Consensus 218 ~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~~---~ 289 (318)
T TIGR00747 218 VRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDEL---L 289 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHHH---H
Confidence 444667899999999999999999996332 2234578899999986421 1122 34555555555443 3
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
++| +.+++|+++.
T Consensus 290 ~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 RTGRIKPGDLLLLVAF 305 (318)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 333 3577887774
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.27 Score=40.06 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=45.9
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
.+.++|+++|+++|+++ +|| ++..|-.+....+. +.+.++-.. ..++.+ .+-..+||+.+++-++.|...
T Consensus 26 ~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 26 ALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHHHH
Confidence 45678999999999997 999 88999877765443 445555332 122322 146789999999999999877
Q ss_pred HHh
Q 016111 351 RRK 353 (395)
Q Consensus 351 ~~~ 353 (395)
+-.
T Consensus 104 ~l~ 106 (119)
T PF02801_consen 104 LLA 106 (119)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.72 Score=44.50 Aligned_cols=81 Identities=9% Similarity=0.096 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-c----CccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML-Y----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~-i----~~~C~~~~~aL~~A~~ 176 (395)
..+...++++++|+++|++++|||.+++... .+..-..+.++||++..- ... + +.++++...+|..+
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k--~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAK--AASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHH--hhhhHHhhCcHHHHHHHHHHHHH--
Confidence 4456678899999999999999999887332 233456789999998653 221 1 34555555555433
Q ss_pred HHHcC---CCCeEEEEEe
Q 016111 177 FAENN---PGARVLVVCS 191 (395)
Q Consensus 177 ll~~g---~~~~vLvv~~ 191 (395)
+..+ +.+++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 3333 3578888774
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.89 E-value=1.1 Score=43.32 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ 176 (395)
.......++.+++|+++|++++|||.+++..... ..-..++++||++.... ...+ +.+|++...+|..
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~-~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERF-VTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHh-hhhHhhhCcHHHHHHHHHHHH---
Confidence 4455677889999999999999999988644322 23468899999986521 1111 3344445555543
Q ss_pred HHHcC---CCCeEEEEE
Q 016111 177 FAENN---PGARVLVVC 190 (395)
Q Consensus 177 ll~~g---~~~~vLvv~ 190 (395)
++++| +.+++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34444 357777776
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=89.83 E-value=1 Score=44.46 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=53.9
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHH-cCCCCcccc---ce-ec-CccchhHHHHHHH
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKM-LGLNPSVKR---VM-LY-FQGCYIGATAIRM 173 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~-Lgl~~~~~~---~~-~i-~~~C~~~~~aL~~ 173 (395)
+...+...++++++|+++|++++|||.+++...... .-..+.++ ||+...... .+ .+ |.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 345566778999999999999999999986443221 22234555 565321101 11 12 5678888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 016111 174 AKDFAENNPGARVLVVCS 191 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~ 191 (395)
+..-++ +.+++|+++.
T Consensus 343 ~~~~~~--~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDLA--AGDLGVICSF 358 (372)
T ss_pred HhccCC--CCCEEEEEEe
Confidence 754333 4577777763
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=89.69 E-value=1.4 Score=42.64 Aligned_cols=80 Identities=14% Similarity=0.061 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll~ 179 (395)
....++++++|+++|++++|||.+++.... +.....+.++||++..-. ...+ |.+|++...+|..+ ++
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 446677899999999999999998875432 234467899999985521 1222 34555666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 016111 180 NN---PGARVLVVCS 191 (395)
Q Consensus 180 ~g---~~~~vLvv~~ 191 (395)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 43 4567777763
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=89.40 E-value=1.6 Score=41.86 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++++++|+++|++++|||.+++.... +.....++++||++.... ...+ +.+|++...+|. .++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPMEKT-LVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHh-hhhHhhhCchHHHHHHHHHH---HHH
Confidence 3445678899999999999999999975432 334568899999986421 1111 334555555654 334
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
+.| +.+++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 544 3567777764
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.5 Score=42.62 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-c-CccchhHHHHHHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML-Y-FQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~-i-~~~C~~~~~aL~~A~~ll~~g 181 (395)
....++++++|+++|++++|||.++..... +..-..++++||++..-..... + +.++++.+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 455689999999999999999998864432 2334678999999864211111 1 34555555555433 4443
Q ss_pred ---CCCeEEEEEe
Q 016111 182 ---PGARVLVVCS 191 (395)
Q Consensus 182 ---~~~~vLvv~~ 191 (395)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4577777774
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.09 E-value=1 Score=45.14 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec--------CccchhHHHHHHHHHHHH
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY--------FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i--------~~~C~~~~~aL~~A~~ll 178 (395)
..|++++|+++|++++|||.+.+... +........+.||++... .... -.|++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~~~--vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDRDK--VNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCChhh--ccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999885432 223345667788876542 2111 237778888888888887
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
+.| .++.|
T Consensus 392 ~~g-~~~Gl 399 (417)
T PRK06025 392 RRG-LKRGL 399 (417)
T ss_pred HhC-CCeEE
Confidence 766 45553
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=88.60 E-value=1.2 Score=44.02 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++++++|+++|++++|||.++..... +..-..++++||++..-. ...+ |.++++...+|..+ +
T Consensus 279 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~-~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 279 VRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKV-ISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHe-eecHhhcCcHHHHHHHHHHHHH---H
Confidence 4456678899999999999999998864432 223456899999986421 1122 34556666666544 3
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
+.| +.+++|+++.
T Consensus 351 ~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 351 RSGKVKKGDVIATAGF 366 (379)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 4567777763
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=88.23 E-value=1.9 Score=41.17 Aligned_cols=82 Identities=20% Similarity=0.123 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
..+...++++++|+++|++++|||.+++.... +..-..+.++||++..-. ...+ +.++++.+.+|..+
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~----~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQAN----LRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHHHH---
Confidence 44667788999999999999999998875432 234467899999975521 1122 33444444555433
Q ss_pred HHcC---CCCeEEEEEe
Q 016111 178 AENN---PGARVLVVCS 191 (395)
Q Consensus 178 l~~g---~~~~vLvv~~ 191 (395)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3444 4678888774
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=87.15 E-value=1.4 Score=43.09 Aligned_cols=87 Identities=18% Similarity=0.137 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcCCCCccccce---ec--CccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLGLNPSVKRVM---LY--FQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lgl~~~~~~~~---~i--~~~C~~~~~aL~~A~~ll~ 179 (395)
..++.+++|+++|+++++||+|+.. +.+++.....+..+.+.+|-.....+.. .. +.+.+++...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4588999999999999999988742 3233322223334444444211100011 11 2333444444445555566
Q ss_pred cC--CCCeEEEEEee
Q 016111 180 NN--PGARVLVVCSD 192 (395)
Q Consensus 180 ~g--~~~~vLvv~~d 192 (395)
.| +..++||.+++
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46778888754
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=86.57 E-value=3 Score=39.93 Aligned_cols=81 Identities=17% Similarity=0.058 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++.+++|+++|++++|||.++.... .+..-..+.+.||++.... ...+ +.+|++.+..|. .++
T Consensus 218 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~~ 289 (319)
T PRK09352 218 VRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EAV 289 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HHH
Confidence 344667899999999999999999986432 2234467899999986531 1111 234455555553 344
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
++| +.+++|+++.
T Consensus 290 ~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 290 RDGRIKRGDLVLLEGF 305 (319)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 3577877764
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.40 E-value=3.1 Score=39.91 Aligned_cols=78 Identities=14% Similarity=-0.093 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCC-HHHHHHHHcCCCCcc--cccee-cCccchhHHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPG-ADYQLTKMLGLNPSV--KRVML-YFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~-~a~~l~~~Lgl~~~~--~~~~~-i~~~C~~~~~aL~~A~~ll~ 179 (395)
....++++++|+++|++++|||.++........... ....+....+..+.. ..... -+.++++.+..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 445578999999999999999998875544322222 222233333321110 00112 25567777777777776666
Q ss_pred cC
Q 016111 180 NN 181 (395)
Q Consensus 180 ~g 181 (395)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 55
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=85.50 E-value=3.2 Score=39.23 Aligned_cols=84 Identities=14% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCce-EEEEc----CCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 277 SENIEKCLDEAFSPFGIKDWNSL-FWIVQ----PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 277 ~~~~~~~i~~~L~~~gl~~~~di-~~i~h----q~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
-..+-.+++++|+++|+++ +|| .+|.+ .+.+.+-..+.+++|+..+-... ..+=+|++.-+++++-+.
T Consensus 84 e~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~------nLsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY------NLSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee------cccCCcchhhHHHHHHHH
Confidence 3345678999999999998 899 55433 34567888899999998765433 255556666666655433
Q ss_pred HhhhhcCCccCCCCCceEEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
+- . +..|| .++|+++.
T Consensus 157 ~l-L---~~~p~---~~ALVVst 172 (290)
T PF08392_consen 157 DL-L---QAHPN---SYALVVST 172 (290)
T ss_pred HH-H---HhCCC---cEEEEEEE
Confidence 31 0 13566 68787774
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=85.21 E-value=1.6 Score=39.84 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHH
Q 016111 274 TVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILD 348 (395)
Q Consensus 274 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~ 348 (395)
+.+.+...++++++|++.|+.+ +|| ++|.-. ..+.+--.+.++||++++--.. -.+.+|++.-...|.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence 3455666678889999999997 999 654322 2455667889999997653222 145566666666665
Q ss_pred HHHHhhhhcCCccCCCCCceEEEEEEcc
Q 016111 349 EIRRKSAEEGKVTTGEGLEWGVMFGIGA 376 (395)
Q Consensus 349 ~~~~~~~~~g~i~~G~~~d~vll~~~G~ 376 (395)
.+.+-.. -.|| .+||+++.=.
T Consensus 171 ~A~~~~~----~~p~---a~VLvv~vEl 191 (226)
T PF00195_consen 171 RAKDIAR----ANPG---ARVLVVCVEL 191 (226)
T ss_dssp HHHHHHH----HSTT----EEEEEEEEE
T ss_pred HHHHHHh----CCcc---ceEEEEEEEe
Confidence 4443210 2467 7899988653
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=85.21 E-value=4.9 Score=33.02 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC---------ccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF---------QGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~---------~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||.+=+.-. +-...-...+.||+.... ...+ .||+|....++++.+
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~~~---vN~~GG~la~GHP~gasG~r~~~~l~~~ 96 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDPEK---VNPNGGALALGHPLGASGARLVVELAHQ 96 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGGGG---BSTT--HHHH-BHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccccc---cCcccccccccccccccccchhhhhHHH
Confidence 357999999999999999998775332 223345667888887642 2222 367777778888888
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
+-+.+ .++.++
T Consensus 97 L~~~~-~~~gla 107 (123)
T PF02803_consen 97 LRRRG-GRYGLA 107 (123)
T ss_dssp HHHHT-TSEEEE
T ss_pred HHHhc-hhhhhH
Confidence 87654 455443
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=84.40 E-value=3 Score=40.69 Aligned_cols=81 Identities=21% Similarity=0.209 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e---ec-CccchhHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV-M---LY-FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~-~---~i-~~~C~~~~~aL~~A~~ll 178 (395)
....++++++|+++|++++|||.+++.... +..-..++++||++..-... . .+ |.++++...+|..+..-
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~- 283 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPN----GKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV- 283 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCCc----hHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh-
Confidence 456778999999999999999998865322 22446788899998652110 1 12 45666666666555432
Q ss_pred HcCCCCeEEEEE
Q 016111 179 ENNPGARVLVVC 190 (395)
Q Consensus 179 ~~g~~~~vLvv~ 190 (395)
..+.+++|+++
T Consensus 284 -~~~Gd~vll~~ 294 (347)
T PRK04262 284 -AKPGDRILVVS 294 (347)
T ss_pred -CCCCCEEEEEe
Confidence 23345666655
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=84.01 E-value=4.9 Score=36.81 Aligned_cols=87 Identities=15% Similarity=-0.032 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC----CccccceecCccchhHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLN----PSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~----~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
.....++++++|+++|++++|||.++...... ..............+.. .... ...-+.++++.+..|..+...
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL-IMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccc-cccccchHHHHHHHHHHHHHH
Confidence 45567889999999999999999987644332 21111111111222221 1110 111245666666666666555
Q ss_pred HHcC-------CCCeEEEEE
Q 016111 178 AENN-------PGARVLVVC 190 (395)
Q Consensus 178 l~~g-------~~~~vLvv~ 190 (395)
++.+ +.+++|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HhCCCcCCCCCCcCEEEEee
Confidence 5554 445555554
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=82.90 E-value=3.3 Score=40.01 Aligned_cols=86 Identities=14% Similarity=0.072 Sum_probs=55.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIR 172 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~ 172 (395)
...+.+..+..++++++|++++++++|||.++... .-...-..++++||++... ....+ |.+-++...+|.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k-~~~~~~~yGNtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEK-VVVTVDKYGNTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHH-HhhHHHHhcccccchHHHHHH
Confidence 34556788889999999999999999999988532 2223457889999997653 13333 233344444554
Q ss_pred HHHHHHHcCC---CCeEEEEE
Q 016111 173 MAKDFAENNP---GARVLVVC 190 (395)
Q Consensus 173 ~A~~ll~~g~---~~~vLvv~ 190 (395)
.+ ++.|+ .+.+|+++
T Consensus 291 ~~---~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 EA---LREGRIKPGDLVLLEA 308 (323)
T ss_pred HH---hhhCCCCCCCEEEEEe
Confidence 43 34443 35565554
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.39 E-value=4.2 Score=39.99 Aligned_cols=78 Identities=12% Similarity=-0.084 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------ecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVM------LYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~------~i~~~C~~~~~aL~~A~~ll 178 (395)
-...|++++|+++|++++|||.+...-. .........+.||+........ .--.|++|......+..++-
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~ 334 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK 334 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHH
Confidence 4567999999999999999999876332 2233455667888865421011 12347777777778888776
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
+.| .++.+
T Consensus 335 ~~~-~~~g~ 342 (361)
T PRK06690 335 RED-MKYGI 342 (361)
T ss_pred HhC-CCEEE
Confidence 654 44444
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=80.90 E-value=3.6 Score=41.00 Aligned_cols=71 Identities=17% Similarity=0.064 Sum_probs=52.5
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc------------------cchhHHHHHHHhcCCCccc
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ------------------QKLSATRHVLSEYGNMGGV 341 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~------------------e~~~~~~~~~~~~Gn~~sa 341 (395)
..+++++|+++|+++ +|| .+=+|-.-...--...+.||+.+ .++-.+ --.-.+||-..|
T Consensus 272 ~~A~~~al~~Agi~~-~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~GhP~gA 349 (393)
T cd00826 272 IEAARKALEKAGLGI-GDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIGHPIGA 349 (393)
T ss_pred HHHHHHHHHHcCCCH-HHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcCCCccc
Confidence 367889999999997 999 88888876666666778899875 233221 123458999988
Q ss_pred hHHHHHHHHHHh
Q 016111 342 SVFFILDEIRRK 353 (395)
Q Consensus 342 s~~i~L~~~~~~ 353 (395)
+-...+.++..+
T Consensus 350 tG~~~~~e~~~q 361 (393)
T cd00826 350 SGAAICAELCFE 361 (393)
T ss_pred cHHHHHHHHHHH
Confidence 888888887765
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 395 | ||||
| 3tsy_A | 979 | 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr | 1e-153 | ||
| 3a5s_A | 387 | Benzalacetone Synthase (I207lL208F) Length = 387 | 1e-150 | ||
| 3a5q_A | 387 | Benzalacetone Synthase From Rheum Palmatum Length = | 1e-149 | ||
| 1cgz_A | 389 | Chalcone Synthase From Alfalfa Complexed With Resve | 1e-148 | ||
| 1d6i_A | 388 | Chalcone Synthase (H303q Mutant) Length = 388 | 1e-147 | ||
| 1cml_A | 389 | Chalcone Synthase From Alfalfa Complexed With Malon | 1e-147 | ||
| 1bi5_A | 389 | Chalcone Synthase From Alfalfa Length = 389 | 1e-146 | ||
| 1chw_A | 389 | Chalcone Synthase From Alfalfa Complexed With Hexan | 1e-146 | ||
| 1bq6_A | 388 | Chalcone Synthase From Alfalfa With Coenzyme A Leng | 1e-146 | ||
| 1i86_A | 389 | Chalcone Synthase, G256a Mutant Length = 389 | 1e-146 | ||
| 1i88_A | 389 | Chalcone Synthase (G256v) Length = 389 | 1e-145 | ||
| 1i89_A | 389 | Chalcone Synthase (G256l) Length = 389 | 1e-145 | ||
| 1i8b_A | 389 | Chalcone Synthase (g256f) Length = 389 | 1e-145 | ||
| 1jwx_A | 389 | Chalcone Synthase--F215s Mutant Length = 389 | 1e-145 | ||
| 1d6h_A | 387 | Chalone Synthase (N336a Mutant Complexed With Coa) | 1e-145 | ||
| 1u0v_A | 393 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-143 | ||
| 1z1e_A | 390 | Crystal Structure Of Stilbene Synthase From Arachis | 1e-139 | ||
| 1qlv_A | 402 | Pyrone Synthase (Pys) From Gerbera Hybrida Length = | 1e-136 | ||
| 1u0u_A | 397 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-133 | ||
| 1xes_A | 413 | Crystal Structure Of Stilbene Synthase From Pinus S | 1e-133 | ||
| 3awj_A | 402 | Crystal Structure Of The Huperzia Serrata Polyketid | 1e-126 | ||
| 3ov2_A | 393 | Curcumin Synthase 1 From Curcuma Longa Length = 393 | 1e-126 | ||
| 3ov3_A | 393 | G211f Mutant Of Curcumin Synthase 1 From Curcuma Lo | 1e-125 | ||
| 2d3m_A | 406 | Pentaketide Chromone Synthase Complexed With Coenzy | 1e-118 | ||
| 2d51_A | 406 | Pentaketide Chromone Synthase (M207g Mutant) Length | 1e-118 | ||
| 2p0u_A | 413 | Crystal Structure Of Marchantia Polymorpha Stilbene | 1e-112 | ||
| 3ale_A | 416 | A Type Iii Polyketide Synthase That Produces Diaryl | 1e-102 | ||
| 3oit_A | 387 | Crystal Structure Of Curcuminoid Synthase Cus From | 1e-102 | ||
| 2h84_A | 374 | Crystal Structure Of The C-terminal Type Iii Polyke | 8e-38 | ||
| 1ted_A | 393 | Crystal Structure Of A Type Iii Polyketide Synthase | 2e-31 | ||
| 1tee_A | 393 | Crystal Structure Of C205f Mutant Of Pks18 From Myc | 3e-31 | ||
| 3e1h_A | 465 | Crystal Structure Of A Type Iii Polyketide Synthase | 1e-21 | ||
| 3euq_A | 379 | X-Ray Structural Of A Type Iii Pentaketide Synthase | 3e-21 | ||
| 3euo_A | 379 | Crystal Structure Of A Fungal Type Iii Polyketide S | 4e-20 | ||
| 1u0m_A | 382 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 6e-19 | ||
| 3il9_A | 340 | Structure Of E. Coli Fabh Length = 340 | 4e-06 | ||
| 1hn9_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 5e-06 | ||
| 3v7i_A | 413 | Germicidin Synthase (Gcs) From Streptomyces Coelico | 6e-06 | ||
| 1mzs_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 6e-06 | ||
| 1xpl_B | 390 | Crystal Structure Of Staphylococcus Aureus Hmg-coa | 1e-04 | ||
| 1xpk_D | 388 | Crystal Structure Of Staphylococcus Aureus Hmg-Coa | 1e-04 | ||
| 1xpk_C | 388 | Crystal Structure Of Staphylococcus Aureus Hmg-Coa | 1e-04 | ||
| 1hnh_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 3e-04 | ||
| 1ebl_A | 317 | The 1.8 A Crystal Structure And Active Site Archite | 3e-04 | ||
| 3sqz_A | 389 | Crystal Structure Of Hmg_coa Synthase Complexed Wit | 5e-04 |
| >pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 | Back alignment and structure |
|
| >pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 | Back alignment and structure |
|
| >pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 | Back alignment and structure |
|
| >pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 | Back alignment and structure |
|
| >pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 | Back alignment and structure |
|
| >pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 | Back alignment and structure |
|
| >pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 | Back alignment and structure |
|
| >pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 | Back alignment and structure |
|
| >pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 | Back alignment and structure |
|
| >pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 | Back alignment and structure |
|
| >pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 | Back alignment and structure |
|
| >pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 | Back alignment and structure |
|
| >pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 | Back alignment and structure |
|
| >pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 | Back alignment and structure |
|
| >pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 | Back alignment and structure |
|
| >pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 | Back alignment and structure |
|
| >pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 | Back alignment and structure |
|
| >pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 | Back alignment and structure |
|
| >pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 | Back alignment and structure |
|
| >pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 | Back alignment and structure |
|
| >pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 | Back alignment and structure |
|
| >pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 | Back alignment and structure |
|
| >pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 | Back alignment and structure |
|
| >pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 | Back alignment and structure |
|
| >pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 | Back alignment and structure |
|
| >pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465 | Back alignment and structure |
|
| >pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379 | Back alignment and structure |
|
| >pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide Synthase, Oras Length = 379 | Back alignment and structure |
|
| >pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 | Back alignment and structure |
|
| >pdb|3IL9|A Chain A, Structure Of E. Coli Fabh Length = 340 | Back alignment and structure |
|
| >pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii Length = 317 | Back alignment and structure |
|
| >pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A Type Iii Polyketide Synthase Length = 413 | Back alignment and structure |
|
| >pdb|1MZS|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii With Bound Dichlorobenzyloxy-Indole-Carboxylic Acid Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1XPK|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa Synthase With Hmg- Coa And With Acetoacetyl-Coa And Acetylated Cysteine Length = 388 | Back alignment and structure |
|
| >pdb|1HNH|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii + Degraded Form Of Acetyl-Coa Length = 317 | Back alignment and structure |
|
| >pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii (Fabh) From Escherichia Coli Length = 317 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 713 bits (1842), Expect = 0.0
Identities = 245/392 (62%), Positives = 311/392 (79%), Gaps = 1/392 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V++ +N Q+ G ATILAIGTA P +C+YQ+DY DYYF+VT S+HMT LK+KF RIC
Sbjct: 588 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRIC 647
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +KKRY H+TE++L+++PNI AY SL+ RQ+I+ EVPKLG+EAA KA+KEWGQ
Sbjct: 648 DKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQP 707
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FC+ GV+MPGADY+L +LGL PSV+RVMLY QGCY G T +R AKD AEN
Sbjct: 708 KSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVVCS++++ TFRGPS+ L L GQALFGDG+AA+I+G++PD ++ E+PLFQ+
Sbjct: 768 NAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-ERPLFQL 826
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
VS AQT +P S +AG RE+GLT HL NV T++SEN+EKCL +AF P GI DWNSLF
Sbjct: 827 VSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLF 886
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
WI PGGPAI++ +EAKL L ++KL ATRHVLSEYGNM V FILDE+R+KS + +
Sbjct: 887 WIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERA 946
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392
TTGEGL+WGV+FG G G+T++TVVL S P T
Sbjct: 947 TTGEGLDWGVLFGFGPGLTIETVVLHSIPMVT 978
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 | Back alignment and structure |
|---|
Score = 493 bits (1270), Expect = e-175
Identities = 197/389 (50%), Positives = 283/389 (72%), Gaps = 1/389 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M + + +Q+ G ATI+AIGTA PPN Q+ +PD+YFRVTNSD LK+KF+R+C
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
EK+ VKKRY H+TE+ILK+ P +C+Y +S D RQDI+V E+P+L +EAA KAIKEWG+
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHL+FCS+ G+DMPGADY+L +LGL +V R+M+Y Q C++GA +R+AKD AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240
N GARVLVV ++++ +FRGP++ + LAGQA FGDGA A+++GA+P EKP+++I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEG-IEKPIYEI 239
Query: 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLF 300
+ Q + S V G R G T + + ++++N+ + L+ A +P G+++WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 301 WIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360
W+ PG AI++ IEAKL L KLS RHV +EYGNM +V+F++DE+R++SA EG+
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 361 TTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
TTG+GL+WGV+ G G G++++TVVLRS P
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSMP 388
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 | Back alignment and structure |
|---|
Score = 482 bits (1242), Expect = e-171
Identities = 190/385 (49%), Positives = 253/385 (65%), Gaps = 8/385 (2%)
Query: 9 NQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKR 68
Q+ GLA +LAIGTANPPNC+ Q + PD+YFRVTNSDH+T LK KFKRIC++ V++R
Sbjct: 3 RSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRR 62
Query: 69 YFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLI 128
Y H TE++L +P D SLD+R DI VP+L EAA KAI EWG+ + ITHL+
Sbjct: 63 YLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLV 122
Query: 129 FCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLV 188
+ G +PG D++L +LGL PSV+R ML+ GC+ G A+R+AKD AEN+ GARVLV
Sbjct: 123 VTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLV 182
Query: 189 VCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL 248
V ++L+L F GP + L Q LFGDGAAA+I+GA+ D E+PLF+IVS AQTI+
Sbjct: 183 VAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADD--VERPLFEIVSAAQTII 240
Query: 249 PGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF----GIKDWNSLFWIVQ 304
P SD + +F E L L + V ++ +N+E+CL + F P G WN LFW V
Sbjct: 241 PESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVH 300
Query: 305 PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGE 364
PG I++Q++A LGL+ KL+A+R VLS+YGNM G +V F LDE+RR+ E GE
Sbjct: 301 PGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAA--AAGE 358
Query: 365 GLEWGVMFGIGAGVTVDTVVLRSFP 389
E GVM G G+TVD ++L +
Sbjct: 359 WPELGVMMAFGPGMTVDAMLLHATS 383
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 | Back alignment and structure |
|---|
Score = 466 bits (1200), Expect = e-164
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 13/378 (3%)
Query: 12 QGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFH 71
+A I + T P + Q+D D RV +++ R+ +KS + R
Sbjct: 28 PPTTVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTRRMA 84
Query: 72 VTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCS 131
V D L ++ + +++ R + L + + +A+ ++I L+ +
Sbjct: 85 V--DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLAT 142
Query: 132 LVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCS 191
G PG D + K LGL+PS+ RV++ F GC A+ A ++ +P + LVVC
Sbjct: 143 STGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCI 202
Query: 192 DLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGS 251
+L D + + +LFGDG AAL+IGA+ E + S +L +
Sbjct: 203 ELCSVNAVFADD--INDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNT 260
Query: 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIV 311
+ + G+T LS+N+ + + + E G++ + W + PGGP I+
Sbjct: 261 EDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 320
Query: 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVM 371
Q LG+ + + + VL+ +GNM VS+ F+L+ + +++ + + + GV
Sbjct: 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQA------ESAKAISTGVA 374
Query: 372 FGIGAGVTVDTVVLRSFP 389
F G GVTV+ ++
Sbjct: 375 FAFGPGVTVEGMLFDIIR 392
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 | Back alignment and structure |
|---|
Score = 464 bits (1196), Expect = e-163
Identities = 223/387 (57%), Positives = 290/387 (74%), Gaps = 2/387 (0%)
Query: 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKS 63
+ + Q+ G A+ILAIGTANPPN + Q+ YPD+YFR+T ++H T LK KFKRICE+S
Sbjct: 26 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERS 85
Query: 64 NVKKRYFHVTEDILKKNPNICAY-DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKS 122
+K+RY ++TE+ILKKNP++CA+ + SLD+RQ +L EVP+L +EAA KAI+EWGQSKS
Sbjct: 86 AIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKS 145
Query: 123 QITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNP 182
ITHLIFCS D+PGAD+++ K+LGL+PSVKRV ++ GC+ G T +RMAKD AENN
Sbjct: 146 GITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNR 205
Query: 183 GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242
GARVLV+CS+ + TFRGPS+ +L L GQALFGDGA+ALI+GA+P EK F+IV
Sbjct: 206 GARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQ-VEKACFEIVW 264
Query: 243 GAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWI 302
AQT++P S+ + G+ RE+GLT L V ++S NIE C+ EAFS F I DWN LFW+
Sbjct: 265 TAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWV 324
Query: 303 VQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362
V PGG AI++++EAKL L KL TRHV+SEYGNM V FILD+ R+ S + G TT
Sbjct: 325 VHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTT 384
Query: 363 GEGLEWGVMFGIGAGVTVDTVVLRSFP 389
GEGLE GV+FG G G+T++TVVL+S P
Sbjct: 385 GEGLEMGVLFGFGPGLTIETVVLKSVP 411
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 | Back alignment and structure |
|---|
Score = 461 bits (1188), Expect = e-163
Identities = 237/379 (62%), Positives = 300/379 (79%), Gaps = 1/379 (0%)
Query: 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF 70
++ LAT++AIGTANPPNC YQAD+PD+YFRVTNSDH+ LKQKFKR+CE S ++KRY
Sbjct: 7 EEMKKLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYL 66
Query: 71 HVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFC 130
HVTE+ILK+NPNI AY+ +SL+ R + V+ V +LG+EAA KAIKEWGQ KS+ITHLI C
Sbjct: 67 HVTEEILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVC 126
Query: 131 SLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVC 190
L GVDMPGADYQLTK+L L+PSVKR M Y GCY G T +R+AKD AENN GARVL+VC
Sbjct: 127 CLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVC 186
Query: 191 SDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPG 250
S+++ FRGPS+ +L + GQA+ GDGAAA+I+GA+PD T E+P+F++VS AQTI+P
Sbjct: 187 SEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLT-VERPIFELVSTAQTIVPE 245
Query: 251 SDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAI 310
S + G E GL+ HL K V T++S NI+ CL +AF+P I DWNSLFWI PGGPAI
Sbjct: 246 SHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAI 305
Query: 311 VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGV 370
++Q+ AK+GL+++KL TR VL +YGNM +VFFI+DE+R+KS E G+ TTGEGLEWGV
Sbjct: 306 LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGV 365
Query: 371 MFGIGAGVTVDTVVLRSFP 389
+FG G G+TV+TVVLRS P
Sbjct: 366 LFGFGPGITVETVVLRSVP 384
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 | Back alignment and structure |
|---|
Score = 459 bits (1182), Expect = e-162
Identities = 80/377 (21%), Positives = 141/377 (37%), Gaps = 26/377 (6%)
Query: 10 QQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRY 69
G +AT+ + P + I + + R R+ E + V+ R+
Sbjct: 3 HGGSGFMATLCRPSVSVPEHVITMEETLELARRRHTDHPQL---PLALRLIENTGVRTRH 59
Query: 70 FHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIF 129
+ ++P + R + RE +A+ + + I +I+
Sbjct: 60 IVQPIEDTLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIY 111
Query: 130 CSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVV 189
S G MP L +G + + +++ + GC G AI A DF P A L+V
Sbjct: 112 VSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIV 171
Query: 190 CSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249
+ ++ P+D +G L LFGDG AA ++ ++ ++P
Sbjct: 172 ACEFCSLCYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGRGG------TGVRLERNGSYLIP 224
Query: 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPA 309
++ + + G L K V + E + L E G + F+IV GGP
Sbjct: 225 KTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDASDLDFYIVHAGGPR 283
Query: 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWG 369
I++ + L + +R L+EYGN+ V L + EG V G G
Sbjct: 284 ILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFD----EGGVEEG---ARG 336
Query: 370 VMFGIGAGVTVDTVVLR 386
++ G G G+T + +
Sbjct: 337 LLAGFGPGITAEMSLGC 353
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 | Back alignment and structure |
|---|
Score = 439 bits (1131), Expect = e-154
Identities = 95/385 (24%), Positives = 173/385 (44%), Gaps = 22/385 (5%)
Query: 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKK 67
+ + + +L IG + P I Q D +K KRI E+S +K
Sbjct: 5 RLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDF--SDKAETNEKVKRIFEQSQIKT 62
Query: 68 RYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHL 127
R+ D K +I ++ + + VP L ++A +A+K+WG K ITH+
Sbjct: 63 RHL--VRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHI 120
Query: 128 IFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVL 187
+ + G+ +P +++L +LGLN V+RV L GC G +++R A A+ +P R+L
Sbjct: 121 VSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRIL 180
Query: 188 VVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247
VVC+++ F + ++F DG+AA IIG NP + E PL++++
Sbjct: 181 VVCTEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNPR--IEETPLYEVMCSINRS 236
Query: 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNS-----LFWI 302
P +++ + + G + L ++ V+ IE +D ++ + ++
Sbjct: 237 FPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL 296
Query: 303 VQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362
+ GG +I+ IE LG+ ++ T V YGNM SV F++D R+ +
Sbjct: 297 IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLP----- 351
Query: 363 GEGLEWGVMFGIGAGVTVDTVVLRS 387
+ + G G+ + L++
Sbjct: 352 ----TYSISLAFGPGLAFEGCFLKN 372
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 | Back alignment and structure |
|---|
Score = 406 bits (1044), Expect = e-140
Identities = 84/389 (21%), Positives = 160/389 (41%), Gaps = 21/389 (5%)
Query: 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF 70
G +I +G PP + + +K I + + +R
Sbjct: 26 VAGELGLSITGLGVQYPPYSLGPDAIDIL---SKRYHPESPAMKKVLAINRYTGIDQRSS 82
Query: 71 HVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFC 130
D +P + + ++ ++ + + L EA+ KA+ E +QITH++
Sbjct: 83 IGNPD----HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVST 138
Query: 131 SLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA----ENNPGARV 186
+ PG D+ + K LGL+ +++V+L+ GC G A+R A + AR+
Sbjct: 139 TCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARI 198
Query: 187 LVVCSDLSLGTFRGPS---DANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243
LV+ ++S R DA G ALF D A+A+I+ + ++ ++
Sbjct: 199 LVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGW 258
Query: 244 AQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS------PFGIKDWN 297
++P S+ D+ MG V LS V + +++ + S P +
Sbjct: 259 ENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPA 318
Query: 298 SLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357
W + PGG I++ E+ +GL + + A+ +GN ++F +L+ +R K +
Sbjct: 319 DFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKD-MD 377
Query: 358 GKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
G+ E+ V G G+ V+ +L+
Sbjct: 378 ALAPGGKVKEYVVGCAFGPGINVEMCMLK 406
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 | Back alignment and structure |
|---|
Score = 402 bits (1034), Expect = e-139
Identities = 68/407 (16%), Positives = 127/407 (31%), Gaps = 47/407 (11%)
Query: 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF 70
Q A + A + + + + + R + + I + ++ R +
Sbjct: 21 QSNAMAAYLCAPAVIHGEHSVETREIVE-EVRGRHPHAP--WAPRIDGIAASTGIESRGW 77
Query: 71 HVTEDILKKNPNICAYD----------------------------GSSLDSRQDILVREV 102
+ + ++ R V
Sbjct: 78 MLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAV 137
Query: 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQ 162
GE AA A++ G + + LI + +PG D L L L +
Sbjct: 138 QAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQW 197
Query: 163 GCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAAL 222
C G ++ +A D +P VLVV S+ T++ P+D L L + LF D A A
Sbjct: 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQ-PADDTLESLIVRLLFADTAVAA 256
Query: 223 IIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEK 282
++ P + + ++ + LPG+ + R G + + V E +
Sbjct: 257 VVTGRPR----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTA 312
Query: 283 CLD--EAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLK-QQKLSATRHVLSEYGNMG 339
+ W+ + PGG ++ +E + + L + GN G
Sbjct: 313 MWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRG 372
Query: 340 GVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
G +VF IL + G V++ G+T +
Sbjct: 373 GAAVFDILRRAHDAGQKTG--------SRAVLYAAAPGLTATALEGE 411
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 1e-14
Identities = 58/293 (19%), Positives = 100/293 (34%), Gaps = 54/293 (18%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-PGADYQLTKMLGLNPSVKRVMLYFQG 163
+G AA I + K +I +I + VD A Q+ +LG+ P R +
Sbjct: 54 MGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA-RCFEMKEA 110
Query: 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALI 223
CY AI++AKD+ P +VLV+ +D + G+ G GA A++
Sbjct: 111 CYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSG---------GEPTQGAGAVAMV 161
Query: 224 IGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMG---LTV--HLSKNVATVVSE 278
I NP + + A DV +R G V LSK+
Sbjct: 162 IAHNP-------SILALNEDAV----AYTEDVYDFWRPTGHKYPLVDGALSKDAYI---R 207
Query: 279 NIEKCLDEAFSPFGIK--DWNSLFWIVQPGGPAIVNQIEAKLGLK---------QQKLSA 327
+ ++ +E G D+ SL + V + + + +
Sbjct: 208 SFQQSWNEYAKRQGKSLADFASLCFHVP--FTKMGKKALESIIDNADETTQERLRSGYED 265
Query: 328 TRHVLSEYGNMGGVSVFFILDE-IRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379
GN+ S++ L + + + G+ +F G+G
Sbjct: 266 AVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETI--------GLFSYGSGSV 310
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 4e-12
Identities = 54/318 (16%), Positives = 96/318 (30%), Gaps = 67/318 (21%)
Query: 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLV--GVDMPGADYQLTKMLGLNPSVKRVML 159
P++ AA A+ + ++ ++ SL G+D+ A +
Sbjct: 54 PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPA---- 109
Query: 160 YF---QGCYIGATAIRMAKDFAENNPGAR---VLVVCSDLSLGTF----RGPSDANLGCL 209
F Q C G AI +A + + GA +L +
Sbjct: 110 -FGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSVD------VT 162
Query: 210 AGQALFGDGAAALIIGANPDTT--LS---------EKPLFQIVSGAQTILPGSDSDVAGQ 258
++GDGAAAL++ LS E A + S G
Sbjct: 163 ----MYGDGAAALVLSTRDGFARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGT 218
Query: 259 FREMGLTV----HLSKNVATVVSENIEKCLDEAFSPFGIK----DWNSLFWIV--QPGGP 308
G + L+ ++ + L++A G V
Sbjct: 219 RTVRGAELADLPDLTHRYIDLLVAAKTQALEDA----GTAIEDIA-----HAVIPV-SRR 268
Query: 309 AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEW 368
+++ LGL ++ S G++G + L + V G+ +
Sbjct: 269 GTGHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVE----NALVQPGDRV-- 320
Query: 369 GVMFGIGAGVTVDTVVLR 386
++FG GAG T V+
Sbjct: 321 -LLFGGGAGYTCTAAVVE 337
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 5e-11
Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 41/289 (14%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-PGADYQLTKMLGLNPSVKRVMLYFQG 163
AA + + K I +I + +D A L +++G+ P R +
Sbjct: 59 FAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFA-RSFEIKEA 115
Query: 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALI 223
Y +++AK+ +P +VLVV +D++ G GA A++
Sbjct: 116 XYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG-LNSGGEPTQ--------GAGAVAML 166
Query: 224 IGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLT--VHLSKNVATVVSENIE 281
+ + P + + T D+ +R G + ++
Sbjct: 167 VSSEPRIL-----ALKEDNVMLT------QDIYDFWRPTGHPYPMVDGPLSNETYIQSFA 215
Query: 282 KCLDEAFSPFGIK--DWNSLFW-------IVQPGGPAIVNQIEAKLGLKQQKLSATRHVL 332
+ DE G+ D+++L + + I +Q EA+ + +
Sbjct: 216 QVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYS 275
Query: 333 SEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVD 381
GN+ S++ L + +T G + +F G+G +
Sbjct: 276 RRVGNLYTGSLYLGLISLLE---NATTLTAGNQI---GLFSYGSGAVAE 318
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 8e-10
Identities = 48/311 (15%), Positives = 94/311 (30%), Gaps = 66/311 (21%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
+AA KA+ + +I LI S+ D P ++ LG++
Sbjct: 71 AATQAARKALIDANIGIEKIGLLINTSVSR-DYLEPSTASIVSGNLGVSDHC-------- 121
Query: 163 GCY-IGAT------AIRMAKDFAENNPGARVLVVCSD-LSL---GTFRGPSDANLGCLAG 211
+ + + +A E LVV + +L T + ++
Sbjct: 122 MTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEF 181
Query: 212 QA-----LFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVA---GQFREM- 262
+ G GAAA+++ + P G T + +
Sbjct: 182 RNELAALTLGCGAAAMVMARS-----ELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTD 236
Query: 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA-- 316
+ + + G L V Q V++ A
Sbjct: 237 TRLLL--IEGIKLAQKTFVAAKQVL----GW-AVEELDQFVIHQ------VSRPHTAAFV 283
Query: 317 -KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIG 375
G+ K+ E+GN+G SV +L +++ G++ G+ + + GIG
Sbjct: 284 KSFGIDPAKVMTI---FGEHGNIGPASVPIVLSKLKE----LGRLKKGDRI---ALLGIG 333
Query: 376 AGVTVDTVVLR 386
+G+ +
Sbjct: 334 SGLNCSMAEVV 344
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 1e-07
Identities = 61/304 (20%), Positives = 100/304 (32%), Gaps = 58/304 (19%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-MPGADYQLTKMLGLNPSVKRVMLY--- 160
+ EA +A+ G S + I +I + P A + LG K ++ +
Sbjct: 64 MATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGA----KGILGFDLS 119
Query: 161 -----FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALF 215
F Y A+ A D A +LVV ++ L D C +F
Sbjct: 120 AGAAGF--GY----ALGAAADMIRGGGAATMLVVGTE-KLSPTIDMYDRGN-CF----IF 167
Query: 216 GDGAAALIIGANPDTTLSEKPLFQIVSGAQTI-LPGSDSDVAGQFREMGLTVHLS----- 269
DGAAA+++G P + A I A V L
Sbjct: 168 ADGAAAVVVGETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVF 227
Query: 270 KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA---KLGLKQ 322
+ A + + + +D A G+ + + V Q A N E L L+
Sbjct: 228 RWAAFKMGDVGRRAMDAA----GV-RPDQIDVFVPHQ----A--NSRINELLVKNLQLRP 276
Query: 323 QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382
+ A + GN S+ + E+ G G+ ++ G GAG++
Sbjct: 277 DAVVAN--DIEHTGNTSAASIPLAMAELLT----TGAAKPGDLA---LLIGYGAGLSYAA 327
Query: 383 VVLR 386
V+R
Sbjct: 328 QVVR 331
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 9e-06
Identities = 73/312 (23%), Positives = 117/312 (37%), Gaps = 79/312 (25%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVM---- 158
+G EAAT+AI+ G K QI ++ + P A Q+ MLG+ K
Sbjct: 54 MGFEAATRAIEMAGIEKDQIGLIVVATTSA-THAFPSAACQIQSMLGI----KGCPAFDV 108
Query: 159 -------LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAG 211
Y A+ +A + ++ LVV SD L P+D +
Sbjct: 109 AAACAGFTY---------ALSVADQYVKSGAVKYALVVGSD-VLARTCDPTDRGT-II-- 155
Query: 212 QALFGDGAAALIIGANPD-----TTL----SEKPLFQIVSGAQTILPGSDSDVAGQFREM 262
+FGDGA A ++ A+ + T L S L + + + M
Sbjct: 156 --IFGDGAGAAVLAASEEPGIISTHLHADGSYGELLTLPNA------DRVNPENSIHLTM 207
Query: 263 -GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA- 316
G V K T ++ +++ L + + L W+V Q A N I A
Sbjct: 208 AGNEVF--KVAVTELAHIVDETLAAN----NLDR-SQLDWLVPHQ----A--NLRIISAT 254
Query: 317 --KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374
KLG+ + T L +GN SV LDE R +G++ G+ + ++
Sbjct: 255 AKKLGMSMDNVVVT---LDRHGNTSAASVPCALDEAVR----DGRIKPGQLV---LLEAF 304
Query: 375 GAGVTVDTVVLR 386
G G T + ++R
Sbjct: 305 GGGFTWGSALVR 316
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 1e-05
Identities = 62/309 (20%), Positives = 112/309 (36%), Gaps = 80/309 (25%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVM---- 158
+ +AA +A++E S ++ +I +L P + L K V
Sbjct: 53 MATQAAKEALREANLSPEELDLIILATLTP-QKRFPSTACLVQAQLKA----KGVYAFDI 107
Query: 159 -------LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAG 211
+Y A+ +A F ++ VLV+ ++ L D + C+
Sbjct: 108 SAACSGFIY---------ALDIADSFIKSGKAKNVLVIGAE-KLSEAVDWEDRST-CV-- 154
Query: 212 QALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV-------AGQFREM-G 263
LFGDGA A+++ + D S ++ + + M G
Sbjct: 155 --LFGDGAGAVVVTRSEDK-----------SDILATRMYAEGSLEELLHADNCGYIRMKG 201
Query: 264 LTVHLSKNVATVVSENIEKCLDEA-FSPFGIKDWNSLFWIVQPGGPAIVNQ--IEA---K 317
+ K + E + L++A P + ++ P N I A K
Sbjct: 202 RELF--KVAVRSMEEVCREVLEKAGVKPEEVS------LVI----PHQANVRIINALAEK 249
Query: 318 LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAG 377
L + ++K+ + +YGN S+ L E + EGKV G+ + +M +G G
Sbjct: 250 LNIPKEKVFVN---IQKYGNTSAASIPIALHEAIK----EGKVKRGDLI---LMTAMGGG 299
Query: 378 VTVDTVVLR 386
+T V+LR
Sbjct: 300 LTWGAVLLR 308
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 57/322 (17%), Positives = 96/322 (29%), Gaps = 80/322 (24%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
L EAA K + Q+ +I C+ D P + L LG+
Sbjct: 83 LAYEAARKLFAQGAVGADQVDFVILCTQAP-DYVLPTSACMLQHRLGIPTHA-------- 133
Query: 163 GCY-IGAT------AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALF 215
G + + +AK E VL++ +D + + P D ++ LF
Sbjct: 134 GALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTAD-TYSKYLHPLDKSV-RT----LF 187
Query: 216 GDGAAALIIGANPDTTLSEKPLFQ--------------IVSGAQTILPGSDSDVAGQFRE 261
GDGA+A + A E IV P S
Sbjct: 188 GDGASATAVIAEH----GELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDA 243
Query: 262 MGLTVHLS----------KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPA 309
G V ++ L A G ++ V Q A
Sbjct: 244 SGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALA----GEPR-ENIDCFVLHQ----A 294
Query: 310 IVNQ--IEA---KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGE 364
N+ ++A K+ + + K + GN ++ L+ +R G + G
Sbjct: 295 --NRFMLDALRKKMKIPEHKFPVL---MEHCGNTVSSTLPLALETMRA----NGTLARGM 345
Query: 365 GLEWGVMFGIGAGVTVDTVVLR 386
L ++ G G G + ++
Sbjct: 346 RL---MLLGFGVGYSWAGCLVN 364
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 72/411 (17%), Positives = 129/411 (31%), Gaps = 86/411 (20%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEK------------SN 64
A I A G PP+ + A+ + + + + + E S
Sbjct: 25 AVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASG 84
Query: 65 VKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQI 124
+K RY + K + R + + + ++ AA +AI+ WG+ + +I
Sbjct: 85 IKSRYV-----VAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERI 139
Query: 125 THLIFCSLVGVDM--PGADYQLTKMLGLNP-----SVKRVMLYFQGCYIGAT-AIRMAKD 176
+ C+ + P ++ LGL +V C AT ++ A D
Sbjct: 140 G-AVLCACSNMQRAYPAMAIEVQNALGLGGFAFDMNV--------ACS-SATFGLKTAAD 189
Query: 177 FAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKP 236
F VL+V ++ D + +FGD A A I+ D +
Sbjct: 190 FVGGGSVDAVLMVNPEI-CSGHLNFRDRD-SHF----IFGDVATAAIVERADD----AQG 239
Query: 237 LFQIVS------GAQTILPGSDSDVAGQFREMGLTVHLS--------KNVATVVSENIEK 282
+ I+ + I + L K V +VSE I +
Sbjct: 240 GWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIE 299
Query: 283 CLDEAFSPFGIK----DWNSLFWIVQPGGPAIVNQIEA---KLGLKQQKLSATRHVLSEY 335
E GI W+ Q A +N E K+ + +L +Y
Sbjct: 300 HAREI----GIDPHGLKR---MWLHQ----ANINMNEIIGRKVLGRDPTRDENVIILDDY 348
Query: 336 GNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
N + + + G+ G++ GAG + TV ++
Sbjct: 349 ANTSSAGSIIAFHK------HQDDMAQGD---LGLICSFGAGYSAGTVFVQ 390
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 3e-05
Identities = 61/306 (19%), Positives = 106/306 (34%), Gaps = 62/306 (20%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLY-- 160
+G A+ +A++ G ++I L+ S + + P + LG +
Sbjct: 63 MGVAASRRALEHAGVDPAEID-LVVVSTMTNFVHTPPLSVAIAHELGA----DNAGGFDL 117
Query: 161 ------FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQAL 214
F C+ A+ +A D E+ VLVV ++ + +D +L L
Sbjct: 118 SAACAGF--CH----ALSIAADAVESGGSRHVLVVATE-RMTDVIDLADRSL-SF----L 165
Query: 215 FGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI-LPGSDSDVAGQFREMGLTVHLS---- 269
FGDGA A ++G + + +G ++ + S + +
Sbjct: 166 FGDGAGAAVVGPSDVPGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRV 225
Query: 270 -KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA---KLGLK 321
+ V + L+ A G+ L V Q A N I+ +LG+
Sbjct: 226 FRWAVADVVPAAREALEVA----GLTV-GDLVAFVPHQ----A--NLRIIDVLVDRLGVP 274
Query: 322 QQK-LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTV 380
+ +S + GN SV LD + R G V G +M G GAG++
Sbjct: 275 EHVVVSRD---AEDTGNTSSASVALALDRLVR----SGAVPGGGPA---LMIGFGAGLSY 324
Query: 381 DTVVLR 386
L
Sbjct: 325 AGQALL 330
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 4e-05
Identities = 59/420 (14%), Positives = 113/420 (26%), Gaps = 135/420 (32%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRI- 59
M +K + Q + T + I + Q + Y V+ L+Q +
Sbjct: 95 MSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQV-FAKYN--VSRLQPYLKLRQALLELR 148
Query: 60 ------------CEKS----NV-------KKRYFHV----------TEDILKKNPNICAY 86
K+ +V K F + E +L+ +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 87 DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTK 146
+ SR D KL + ++ +SK L LV + + Q
Sbjct: 209 IDPNWTSRSDHSSN--IKLRIHSIQAELRRLLKSKPYENCL----LV-LL----NVQ--- 254
Query: 147 MLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPS---- 202
N F N ++L+ + F +
Sbjct: 255 ----NAKA-------------------WNAF---NLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 203 ----DANLGCLAGQA--LFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVA 256
++ + L + P L + T P S +A
Sbjct: 289 ISLDHHSMTLTPDEVKSLL-----LKYLDCRPQ-DLPRE--------VLTTNPRRLSIIA 334
Query: 257 GQFREMGLTVHLSKNVAT-VVSENIEKCLD--------EAFSPFGI--KDWN------SL 299
R+ T K+V ++ IE L+ + F + + SL
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 300 FW--IVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357
W +++ +VN++ +++Q +T + S I E++ K E
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS------------IYLELKVKLENE 442
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 66/303 (21%), Positives = 116/303 (38%), Gaps = 59/303 (19%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
L A+ +AI+ I +I + D P L LG+ + F
Sbjct: 68 LAFIASQRAIEAADIDPQSIDLIIVATSTP-DFVFPSTACLLQNKLGI----RNHGAAFD 122
Query: 163 ---GC----YIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALF 215
C Y A+ A F + LV+ ++ + D C+ LF
Sbjct: 123 VQAVCSGFAY----AVATADSFIRSGQHRTALVIGAE-TFSRILDFKDRTT-CV----LF 172
Query: 216 GDGAAALIIGANPDTTLSEKPLFQIVSGAQTI-LPGSDS---DVAGQFREM-GLTVHLSK 270
GDGA A+I+ A+ + + L S + + PG+ + F M G V K
Sbjct: 173 GDGAGAVILQASDEPGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVF--K 230
Query: 271 NVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA---KLGLKQQ 323
V+ + + L++A + + W++ Q N +++ KLGL Q+
Sbjct: 231 LAVNVLEKVAVEALEKA----NLSA-EQIDWLIPHQ------ANIRIMQSTCRKLGLPQE 279
Query: 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTV 383
++ T + E+GN S+ LD R +G++ G+ + ++ G+G G T
Sbjct: 280 RMIVT---VGEHGNTSAASIPLALDVAVR----DGRIKRGQNV---LIEGVGGGFTWGAS 329
Query: 384 VLR 386
V+R
Sbjct: 330 VIR 332
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 8e-05
Identities = 57/307 (18%), Positives = 100/307 (32%), Gaps = 66/307 (21%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
L +A ++ + + +I + D P + GL
Sbjct: 53 LAFKAVEDLLRRHPGALEGVDAVIVATNTP-DALFPDTAALVQARFGLKA---------- 101
Query: 163 GCY-IGAT------AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALF 215
Y + A A+ A E +VL V ++ +L +D + LF
Sbjct: 102 FAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAE-ALSKIIDWNDRAT-AV----LF 155
Query: 216 GDGAAALIIGANP------DTTL----SEKPLFQIVSGAQTILPGSDSDVAGQFREM-GL 264
GDG A ++G L + + LP S M G
Sbjct: 156 GDGGGAAVVGKVREGYGFRSFVLGADGTGAKEL-YHACVAPRLPDGTSMK--NRLYMNGR 212
Query: 265 TVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQ--IEA---KLG 319
V K V++ + +++A G+ + V P N I+A +LG
Sbjct: 213 EVF--KFAVRVMNTATLEAIEKA----GLTP-EDIRLFV----PHQANLRIIDAARERLG 261
Query: 320 LKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379
L ++++ + YGN S+ L E G++ G+ + ++ GAG+T
Sbjct: 262 LPWERVAVN---VDRYGNTSTASIPLALKEAVD----AGRIREGDHV---LLVSFGAGLT 311
Query: 380 VDTVVLR 386
VL
Sbjct: 312 WAAAVLT 318
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 63/319 (19%), Positives = 104/319 (32%), Gaps = 82/319 (25%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVM---- 158
L AA +AI+ G I L+ +L D P + +LGL + +
Sbjct: 77 LMVPAARQAIEAAGLLPEDIDLLLVNTLSP-DHHDPSQACLIQPLLGL----RHIPVLDI 131
Query: 159 -------LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLG-CLA 210
LY ++MA+ VLVVC + L SD +
Sbjct: 132 RAQASGLLY---------GLQMARGQILAGLARHVLVVCGE-VLSKRMDCSDRGRNLSI- 180
Query: 211 GQALFGDGAAALIIGANP-------DTTL----SEKPLFQI---VSGAQTILPGSDSDVA 256
L GDGA A+++ A D L + L S + T L +
Sbjct: 181 ---LLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREG 237
Query: 257 GQFREM-GLTVHLSKNVATVVSENIEKCLDEA-FSPFGIKDWNSLFWIV--QPGGPAIVN 312
G M G + ++ + + + L + I ++ QP N
Sbjct: 238 GGEFLMRGRPMF--EHASQTLVRIAGEMLAAHELTLDDID------HVICHQP------N 283
Query: 313 Q--IEA---KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLE 367
++A +LG+ Q K + T + GNM S L + G+ +
Sbjct: 284 LRILDAVQEQLGIPQHKFAVT---VDRLGNMASASTPVTLAM------FWPDIQPGQRV- 333
Query: 368 WGVMFGIGAGVTVDTVVLR 386
++ G+G T + R
Sbjct: 334 --LVLTYGSGATWGAALYR 350
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 64/305 (20%), Positives = 108/305 (35%), Gaps = 66/305 (21%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVM---- 158
+G EAA AI+ + I +I + P A Q+ +L + +
Sbjct: 61 MGFEAAKNAIEAAQINPQDIELIIVATTSH-SHAYPSAACQVQGLLNI----DDAISFDL 115
Query: 159 -------LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAG 211
+Y A+ +A F + LV+ SD +D + +
Sbjct: 116 AAACTGFVY---------ALSVADQFIRAGKVKKALVIGSD-LNSRKLDETDRST-VV-- 162
Query: 212 QALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI-LPGSDSDVAGQ-FREM-GLTVHL 268
LFGDGA A+I+ A+ + L + L + + + EM G
Sbjct: 163 --LFGDGAGAVILEASEQEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETF- 219
Query: 269 SKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA---KLGLK 321
K +S +E+ L + L W+V Q N I A KL +
Sbjct: 220 -KLAVRELSNVVEETLLAN----NLDK-KDLDWLVPHQ------ANLRIITATAKKLEMD 267
Query: 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVD 381
++ T L +Y N +V LDE R +G++ G+ L ++ G G T
Sbjct: 268 MSQVVVT---LDKYANNSAATVPVALDEAIR----DGRIQRGQLL---LLEAFGGGWTWG 317
Query: 382 TVVLR 386
+ ++R
Sbjct: 318 SALVR 322
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 58/314 (18%), Positives = 97/314 (30%), Gaps = 72/314 (22%)
Query: 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM--PGADYQLTKMLGLNPSVKRVMLYFQ 162
L +A K + G I LIF S + P + L L L
Sbjct: 69 LCRKAGEKLLAGLGWQADSIDALIFVSQTP-NYRLPATAFVLQAELDLP----------A 117
Query: 163 GCY---IGAT------AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQA 213
C I A+ + + + RVL+ D ++ P+D + L
Sbjct: 118 SCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGD-TISKMIDPTDRST-SL---- 171
Query: 214 LFGDGAAALIIGANPDTTL----------SEKPLFQIVSGAQTILPGSDSDVAGQ---FR 260
LFGD + + + L G + +D +AG+
Sbjct: 172 LFGDAGTMTALETSNGDAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECL 231
Query: 261 EM-GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IE 315
M G + V + + + LD A G +S + Q A N ++
Sbjct: 232 FMDGGEIF--NFTLNAVPKLVSRTLDIA----GRDK-DSYDAFLFHQ----A--NLFMLK 278
Query: 316 A---KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMF 372
K GL +++ + EYGN S+ ++ + + L MF
Sbjct: 279 HLAKKAGLPAERVPVN---IGEYGNTSCASIPLLITTELK----DRLKEETLQL---GMF 328
Query: 373 GIGAGVTVDTVVLR 386
G G G + + L
Sbjct: 329 GFGVGYSWASAALA 342
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 47/192 (24%)
Query: 214 LFGDGAAALIIGANP-----DTTL----SEKPLFQIVSGAQTILPGSDSDVAGQFREM-G 263
LFGDGAA ++I A + L A + +M G
Sbjct: 157 LFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEG 216
Query: 264 LTV--HLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIV--QPGGPAIVNQ--IEA- 316
++ K+V+ + + ++ +++ Q A N I+
Sbjct: 217 RSIFDFAIKDVSQNILSLVTD--------------ETVDYLLLHQ----A--NVRIIDKI 256
Query: 317 --KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374
K + ++K + +YGN S+ +LDE G + G + V+ G
Sbjct: 257 ARKTKISREKFLTN---MDKYGNTSAASIPILLDEAVE----NGTLILGSQ-QRVVLTGF 308
Query: 375 GAGVTVDTVVLR 386
G G+T +++L
Sbjct: 309 GGGLTWGSLLLT 320
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 52/190 (27%)
Query: 214 LFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTV-----HL 268
LFGDGA A+IIG + G + GSD G + L + L
Sbjct: 156 LFGDGAGAVIIGEVSEG-----------RGIISYEMGSD----GTGGKH-LYLDKDTGKL 199
Query: 269 S-------KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQ--IEA--- 316
K ++ + + +++A + + + + P N +E+
Sbjct: 200 KMNGREVFKFAVRIMGDASTRVVEKA----NLTS-DDIDLFI----PHQANIRIMESARE 250
Query: 317 KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGA 376
+LG+ + K+S + +++YGN S+ +D+ + GK+ + + V+ G G
Sbjct: 251 RLGISKDKMSVS---VNKYGNTSAASIPLSIDQELK----NGKLKDDDTI---VLVGFGG 300
Query: 377 GVTVDTVVLR 386
G+T + ++
Sbjct: 301 GLTWGAMTIK 310
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 100.0 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 100.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 100.0 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 100.0 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 100.0 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 100.0 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 100.0 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 100.0 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 100.0 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 100.0 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 100.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 100.0 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 100.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 100.0 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 100.0 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 100.0 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 100.0 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 100.0 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 100.0 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 100.0 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 100.0 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 100.0 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 100.0 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 100.0 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 100.0 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 100.0 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 100.0 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 100.0 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 100.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.95 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.86 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.86 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.86 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.86 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.86 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.85 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.85 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.84 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.83 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.82 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.82 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.81 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.81 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.8 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.79 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.79 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.78 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.78 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.77 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.77 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.76 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.76 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.75 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.74 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.74 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.74 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.74 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.73 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.72 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.72 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.69 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.68 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.62 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.39 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.35 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.09 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.79 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.62 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.56 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 94.01 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 92.6 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 92.49 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 91.97 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 91.81 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 91.71 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 91.68 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 91.52 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 91.47 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 91.28 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 91.08 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 91.07 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 91.05 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 90.8 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 89.87 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 89.15 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 87.16 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 86.83 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 85.95 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 84.65 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 83.74 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 83.41 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 81.7 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 81.14 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 80.5 |
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-68 Score=523.27 Aligned_cols=389 Identities=51% Similarity=0.966 Sum_probs=345.7
Q ss_pred CccccccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcC
Q 016111 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKN 80 (395)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 80 (395)
|+.+++.++++++.++++|.|+|+|+|+++++|+++.+.+.++.++++.++++++..+|++++||++||++.+++.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~ 80 (393)
T 3ov2_A 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKER 80 (393)
T ss_dssp --CHHHHHHHHSCSSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHS
T ss_pred CcchhhcccccCCCCCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccC
Confidence 67788899999999999999999999999999999999876555555445677788999999999999999888767777
Q ss_pred CCCcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec
Q 016111 81 PNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY 160 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i 160 (395)
|++.++..|++++|++.|.+...+|+++|+++||+++|++++|||+||++|++++..|+.+++|+++||+++.+.+++++
T Consensus 81 ~~~~~~~~p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v 160 (393)
T 3ov2_A 81 PKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIY 160 (393)
T ss_dssp GGGGSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEE
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEE
Confidence 88888999999999999999999999999999999999999999999999999988899999999999999875337999
Q ss_pred CccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEE
Q 016111 161 FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI 240 (395)
Q Consensus 161 ~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~ 240 (395)
+++|+|++.||.+|.++|++|+.++||||++|.+|..+.+|.+.+++++.+..+|||||+|+||++++..++ ..+.+++
T Consensus 161 ~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~~~ 239 (393)
T 3ov2_A 161 SQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGI-EKPIYEI 239 (393)
T ss_dssp SCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTT-CCCSEEE
T ss_pred cCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcc-cCceeEE
Confidence 999999999999999999999999999999999986577776655556678999999999999998765432 2245788
Q ss_pred EeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCChHHHHHHHHHcCC
Q 016111 241 VSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGL 320 (395)
Q Consensus 241 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~~~~~~~i~~~lgi 320 (395)
.+.+...+|.+.+.+.|.+.++|..+.|++++|+++.+.++++++++|+++|++.++|++|++||+|.++++.++++||+
T Consensus 240 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~v~Hq~n~~i~~~v~~~Lgl 319 (393)
T 3ov2_A 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNWAIIDAIEAKLQL 319 (393)
T ss_dssp EEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGSEEEECCCCHHHHHHHHHHHTC
T ss_pred EecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCcEEEECCCChHHHHHHHHHcCC
Confidence 77777788988777788888888888889999999999999999999999999943667999999999999999999999
Q ss_pred CccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 321 KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 321 ~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
|++|++.+|+++++||||++||+|++|++++++..++|++++|++.|++++++||+|++|++++|||.+.
T Consensus 320 ~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 320 SPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp CTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred CHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 9999999899999999999999999999999764445889998555899999999999999999999865
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-65 Score=500.82 Aligned_cols=376 Identities=50% Similarity=0.885 Sum_probs=327.0
Q ss_pred cccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCC
Q 016111 7 GKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAY 86 (395)
Q Consensus 7 ~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 86 (395)
|++.|++.++++|.|+|+|+|+++++|+++.+.+.+..++++.++++++++||++++||++||++.+++.+...|++.++
T Consensus 1 ~~~~~~~~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~ 80 (387)
T 3oit_A 1 MRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDR 80 (387)
T ss_dssp CCCCCCCSSCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCT
T ss_pred CCcccCCCCCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCcccccc
Confidence 45678899999999999999999999999999886555555555777888999999999999999998877777888888
Q ss_pred CCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchh
Q 016111 87 DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYI 166 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~ 166 (395)
+.|++++|++.|.++..+|+++|+++||+++|++++|||+||++|++++..|+.+++|+++||+++.+.++++++++|+|
T Consensus 81 ~~p~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~ 160 (387)
T 3oit_A 81 DAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFA 160 (387)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhHH
Confidence 99999999999999999999999999999999999999999999999987899999999999999875337899999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee
Q 016111 167 GATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT 246 (395)
Q Consensus 167 ~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
++.||.+|..+|++|+.++||||++|.+|..+.+|.+.+++++.+..+|||||+|+||++++.. . ..+.+++.+.++.
T Consensus 161 ~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~-~-~~~~~~~~~~~~~ 238 (387)
T 3oit_A 161 GCAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADD-V-ERPLFEIVSAAQT 238 (387)
T ss_dssp HHHHHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCS-S-CCCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCc-c-cCCceEEEecccE
Confidence 9999999999999999999999999999855777766555667789999999999999987632 1 2245788887777
Q ss_pred ecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccC----CCCCCCceEEEEcCCChHHHHHHHHHcCCCc
Q 016111 247 ILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF----GIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQ 322 (395)
Q Consensus 247 ~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~----gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~ 322 (395)
..|.+.+.+.|.+.++|+.|.+++++++++.+.++++++++|+++ |++.++|++|++||+|.++++.++++||+|+
T Consensus 239 ~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~d~d~~~~v~Hq~n~~il~~v~~~Lgl~~ 318 (387)
T 3oit_A 239 IIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLEP 318 (387)
T ss_dssp ECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC------GGGSEEEECCCCHHHHHHHHHHHTCCT
T ss_pred EeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccEEEECCCCHHHHHHHHHHcCCCH
Confidence 889888878888888888888899999999999999999999999 9873366789999999999999999999999
Q ss_pred cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCC---CCceEEEEEEccchhhhheeeeecC
Q 016111 323 QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGE---GLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 323 e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~---~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+|+..+|+++++||||+|||+|++|++++++ ++++|. +.|++++++||+|++|++++||+.+
T Consensus 319 ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-----~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 319 GKLAASRRVLSDYGNMSGATVIFALDELRRQ-----RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC---------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-----hhccCCCCCCCCEEEEEEecccceeeeeeeEecc
Confidence 9999988999999999999999999998764 355551 1279999999999999999999864
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-60 Score=468.99 Aligned_cols=385 Identities=58% Similarity=0.995 Sum_probs=321.9
Q ss_pred ccccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCC
Q 016111 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNI 83 (395)
Q Consensus 4 ~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 83 (395)
+++.++.++..++++|.++|+|+|+++++|+++.+.+.....+++.+++.++.+||.+++||++||++.+++.+..+|++
T Consensus 26 ~~~~~~~~~~~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~ 105 (413)
T 1xes_A 26 FEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDV 105 (413)
T ss_dssp CHHHHHHHSCCSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHH
T ss_pred chhhhhcccCCCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccc
Confidence 35566667888899999999999999999999998875433233334555567899999999999999776544445555
Q ss_pred cCCCC-CChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCc
Q 016111 84 CAYDG-SSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQ 162 (395)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~ 162 (395)
.++.. +++.++++.|.+...+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+.+||+++.+.+++++++
T Consensus 106 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~ 185 (413)
T 1xes_A 106 CAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQH 185 (413)
T ss_dssp HSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESC
T ss_pred cccccCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecC
Confidence 55555 78999999999999999999999999999999999999999999997789999999999999876422789999
Q ss_pred cchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe
Q 016111 163 GCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242 (395)
Q Consensus 163 ~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~ 242 (395)
+|+|++.||.+|.++|++|..++||||++|.+|..+.+|.+.+++++.+.++|||||+|+||++.+..++ ....+++.+
T Consensus 186 aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~-~~~~~~l~~ 264 (413)
T 1xes_A 186 GCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQV-EKACFEIVW 264 (413)
T ss_dssp CTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTT-SCCSEEEEE
T ss_pred ccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccc-cCCceEEEe
Confidence 9999999999999999999999999999999987566665444555667899999999999998765332 222477777
Q ss_pred eeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCChHHHHHHHHHcCCCc
Q 016111 243 GAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQ 322 (395)
Q Consensus 243 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~ 322 (395)
.+...+|.+...+.|.+.++|..+.+++++++++.+.++++++++|+++|++.++|++|++||+|..+++.++++||+|+
T Consensus 265 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di~~v~Hq~~~~i~~~~~~~Lgl~~ 344 (413)
T 1xes_A 265 TAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDP 344 (413)
T ss_dssp EEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHTTCCT
T ss_pred eeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccceeEEECCCCHHHHHHHHHHcCCCh
Confidence 77667787766666666666777788999999999999999999999999983378889999999999999999999999
Q ss_pred cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 323 QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 323 e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+|+..+|+++++||||++||+|++|++++++..+.|.+.+|++.|+||+++||+|++|++++|||.+
T Consensus 345 ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 411 (413)
T 1xes_A 345 TKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 411 (413)
T ss_dssp TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCCcEEeEEEEEecc
Confidence 9998877789999999999999999999987222233344443479999999999999999999985
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-59 Score=459.05 Aligned_cols=376 Identities=63% Similarity=1.115 Sum_probs=313.5
Q ss_pred CCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChh
Q 016111 13 GGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLD 92 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
+.++++|.|+|+|+|+++++|+++.+.+....++++.+++.++.+||.+++||++||++.+++.+...|++.+...+++.
T Consensus 9 m~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~ 88 (387)
T 3a5r_A 9 MKKLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLN 88 (387)
T ss_dssp --CCEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHH
T ss_pred cCCCcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHH
Confidence 34468999999999999999999998864333233334555567899999999999999776544444555556678899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
++++.+.++..+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+++||+++.+.++++++++|+|++.||.
T Consensus 89 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~ 168 (387)
T 3a5r_A 89 VRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLR 168 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999877899999999999998764227899999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCc
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSD 252 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (395)
+|.++|++|.+++||||++|.+|..+.+|.+.++.++...++|||||+|+||++.+..++ ..+.+++.+.+...+|.+.
T Consensus 169 ~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~-~~~~~~l~~~~~~~~p~~~ 247 (387)
T 3a5r_A 169 LAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTV-ERPIFELVSTAQTIVPESH 247 (387)
T ss_dssp HHHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTT-CCCCEEEEEEEEEECTTCT
T ss_pred HHHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccc-cCCceEEEeeeEEEeCCCh
Confidence 999999999999999999999987566676544445567899999999999998765332 2224777777766778776
Q ss_pred CccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCChHHHHHHHHHcCCCccchhHHHHHH
Q 016111 253 SDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVL 332 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~ 332 (395)
..+.|.+.+.|..+.+++++++++.+.++++++++|+++|++.++|++|++||+|.++++.++++||+|.+|++.+|+++
T Consensus 248 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l 327 (387)
T 3a5r_A 248 GAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVL 327 (387)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred HhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhheeEEECCCCHHHHHHHHHHcCCChHHhHHHHHHH
Confidence 66667666667777889999999999999999999999999822778899999999999999999999999999877789
Q ss_pred HhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 333 SEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++||||++||+|++|++++++..+.|.+.+|++.|+|++++||+|++|++++|||.+
T Consensus 328 ~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 384 (387)
T 3a5r_A 328 KDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPGITVETVVLRSVP 384 (387)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HhcCCcchhHHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCcceeeehhheecc
Confidence 999999999999999999987212233334433379999999999999999999984
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-60 Score=461.32 Aligned_cols=316 Identities=20% Similarity=0.246 Sum_probs=265.7
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
...+|.|+|+|+|+++|+|+|+.+.+ +.++ +||.+++||++||++.++|+
T Consensus 12 ~~srI~g~g~ylP~~~v~n~el~~~~---~~~~---------e~I~~rtGI~~R~~a~~~e~------------------ 61 (350)
T 4ewp_A 12 AASRIVAVGAYRPANLVPNEDLIGPI---DSSD---------EWIRQRTGIVTRQRATAEET------------------ 61 (350)
T ss_dssp SEEEEEEEEEECCSCEEEHHHHTTTT---TCCH---------HHHHHHHCCSEEECCCSSCC------------------
T ss_pred CCCEEEEEEEEcCCCeEcHHHHHHHh---CCCH---------HHHHhccCceEEEEcCCCCC------------------
Confidence 34789999999999999999998764 3333 89999999999999988773
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+++||++|+++||+++|++++|||+||++|+++ +..|+++++|+++||+++.+ +|+++++|+|++.||.+
T Consensus 62 -------~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~--a~di~~~C~g~~~aL~~ 132 (350)
T 4ewp_A 62 -------VPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP--AYDVSAACAGYCYGVAQ 132 (350)
T ss_dssp -------HHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC--EEEEECGGGHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce--EEEeecchhhHHHHHHH
Confidence 899999999999999999999999999999999 88999999999999999875 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p 249 (395)
|.+++++|+.++||||++|.+|. +.+|. ++.+.++|||||+|+||++.+..++ ..+.+.+++. ...+
T Consensus 133 A~~~i~~g~~~~~Lvv~~E~~s~-~~d~~-----~~~~~~lfgDGA~A~vl~~~~~~~~---~~~~~~sdg~~~~~~~~~ 203 (350)
T 4ewp_A 133 ADALVRSGTARHVLVVGVERLSD-VVDPT-----DRSISFLLGDGAGAVIVAASDEPGI---SPSVWGSDGERWSTISMT 203 (350)
T ss_dssp HHHHHHTTSCSEEEEEEEEEGGG-GCCTT-----CTTTGGGBCEEEEEEEEEEESSCCB---CCCEEEECGGGTTSEEES
T ss_pred hhhhhhCCCccceeEeeeeecee-ccccc-----ccccccccccchheeeeecccCCCc---cceeeeecccccceeeec
Confidence 99999999999999999999997 44553 3346899999999999998776543 1122222221 0111
Q ss_pred CCcC--------------ccceEEecC--ceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHH
Q 016111 250 GSDS--------------DVAGQFREM--GLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV 311 (395)
Q Consensus 250 ~~~~--------------~~~~~~~~~--g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~ 311 (395)
.... ...+..... ...+.| |+.+|+++.+.++++++++|+++|+++ +|| +|++||+|.+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~~~~i~ 282 (350)
T 4ewp_A 204 HSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEP-EDLAAFIPHQANMRII 282 (350)
T ss_dssp SCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCG-GGEEEEEECCSCHHHH
T ss_pred CCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCCh-hHhceEEecCCCHHHH
Confidence 1100 000000000 113556 899999999999999999999999997 999 999999999999
Q ss_pred HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 312 ~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+.++++||+|++++... ++++||||++||+|++|++++++ |++++| |+|++++||+|++|+++||||+
T Consensus 283 ~~~~~~Lgl~~~~~~~~--~l~~~GNtssasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 283 DEFAKQLKLPESVVVAR--DIADAGNTSAASIPLAMHRLLEE----NPELSG---GLALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp HHHHHHTTCCTTSEECC--THHHHCBCGGGHHHHHHHHHHHH----CGGGTT---SEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHcCcChHhEEec--ccccccchHHHHHHHHHHHHHHh----CCCCCc---CEEEEEEEchhhEeEEEEEEeC
Confidence 99999999999997642 59999999999999999999998 899999 9999999999999999999985
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-57 Score=451.66 Aligned_cols=365 Identities=22% Similarity=0.323 Sum_probs=299.9
Q ss_pred CCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCCh
Q 016111 12 QGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSL 91 (395)
Q Consensus 12 ~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
-..++++|.++|+|+|+++|+|+++.+.+.... .+. ...+++.+|.+++||++||++.+++ .|....+..|++
T Consensus 27 ~~~~~v~I~gigt~lP~~~v~n~el~~~~~~~~-~~~--~~~~~~~~i~~~tGI~~R~~~~~~~----~p~~~~~~~ps~ 99 (465)
T 3e1h_A 27 AGELGLSITGLGVQYPPYSLGPDAIDILSKRYH-PES--PAMKKVLAINRYTGIDQRSSIGNPD----HPLVNKPNPPTV 99 (465)
T ss_dssp -CCCCEEEEEEEEECCSSCCBCTHHHHHTCSSS-CCC--HHHHHHHHHTTTSCCCCBCCSSCTT----CGGGSSSSCCCH
T ss_pred CCCCCEEEEEEEEECCCcEEcHHHHHHHHHHhc-ccc--hhHHHHHHHHHhcCCceEEEeeccc----CcccccccCCCH
Confidence 345679999999999999999999977643221 121 1233455689999999999997643 133345668999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHHH
Q 016111 92 DSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGATA 170 (395)
Q Consensus 92 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~a 170 (395)
++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+.+++|+++||+++.+ .++++ +++|+|++.|
T Consensus 100 ~~r~~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~-~~~dv~~~~Csgg~~A 178 (465)
T 3e1h_A 100 KELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL-EKVLLHGIGCSGGLAA 178 (465)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC-EEEEECSCGGGHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCe-eEEEecCCcchHHHHH
Confidence 999999999999999999999999999999999999999999888999999999999999865 26888 7999999999
Q ss_pred HHHHHHHHHc----CCCCeEEEEEeeccccccCCCCCC----CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEE
Q 016111 171 IRMAKDFAEN----NPGARVLVVCSDLSLGTFRGPSDA----NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIV 241 (395)
Q Consensus 171 L~~A~~ll~~----g~~~~vLvv~~d~~s~~~~~~~~~----~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~ 241 (395)
|.+|.++|++ |..++||||++|.+|..+ ++... .++++.+..+|||||+|+||++++.. +. ....+++.
T Consensus 179 L~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~-~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~-~~~~~~l~ 256 (465)
T 3e1h_A 179 LRTAANLCLGHTARGKPARILVLALEVSTTMV-RSELESIDALQETRIGIALFSDCASAVILSNGIGEAPG-KPAIYDLL 256 (465)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEEECCGGGH-HHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTT-CCCSEEEE
T ss_pred HHHHHHHHhcccccCCCCEEEEEEEeecchhc-CcccccccccccccccccccccceeEEEEEccCCCccc-cccceeec
Confidence 9999999997 889999999999998743 22000 01245678999999999999987542 11 12356777
Q ss_pred eeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhcc-------CCCCCCCceEEEEcCCChHHHHHH
Q 016111 242 SGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSP-------FGIKDWNSLFWIVQPGGPAIVNQI 314 (395)
Q Consensus 242 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~-------~gl~~~~di~~i~hq~~~~~~~~i 314 (395)
+.....+|.+.+.+.|.+.+.|+.+.+++++|+++.+.++++++++|++ +|++. +||.|++||+|.+|++.+
T Consensus 257 ~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~-~DId~~~Hqan~rIl~~v 335 (465)
T 3e1h_A 257 GWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKP-ADFDWAMHPGGATILSGA 335 (465)
T ss_dssp EEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSG-GGSEEEECCSSHHHHHHH
T ss_pred cceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCH-HHceEEecCCChHHHHHH
Confidence 6666678888777777777777766779999999999999999999887 67886 999555999999999999
Q ss_pred HHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCC-CCCceEEEEEEccchhhhheeeeecC
Q 016111 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG-EGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 315 ~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G-~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+++||+|++|+..+++++++||||++||+|++|++++++.. |++++| .+.|++++++||+|++|++++|||..
T Consensus 336 ~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~--g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 336 ESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM--DALAPGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp HHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTT--TSCSSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcc--cccCCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 99999999999888889999999999999999999987511 356654 11289999999999999999999975
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-56 Score=437.37 Aligned_cols=356 Identities=19% Similarity=0.266 Sum_probs=297.6
Q ss_pred cCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhh------------
Q 016111 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILK------------ 78 (395)
Q Consensus 11 ~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~------------ 78 (395)
|...++++|.++|+++|+++++|+++.+.+.... ++++ ++++ +.+|++++||++||++.+.+...
T Consensus 21 ~~~~m~~~i~~i~ta~P~~~~~q~~~~~~~~~~~-~~~~-~~~~-~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~ 97 (413)
T 3v7i_A 21 QSNAMAAYLCAPAVIHGEHSVETREIVEEVRGRH-PHAP-WAPR-IDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAR 97 (413)
T ss_dssp ---CCCEEEECCEEEECSEEEEHHHHHHHHHHHC-SSCS-SGGG-HHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHH
T ss_pred ccCCCCeEEEeeEeeCCCcccCHHHHHHHHHHhc-ccch-hHHH-HHHHHHhCCcCeeeeecCHHHhccccccccccccc
Confidence 4556689999999999999999999999986543 3332 3333 67899999999999998865430
Q ss_pred ---cCCCCcC-------------CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHH
Q 016111 79 ---KNPNICA-------------YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADY 142 (395)
Q Consensus 79 ---~~~~~~~-------------~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~ 142 (395)
..|.+++ ...+.+.+|+..+.+...+|+.+|+++||+++|++++|||+||++|++++..|+.+.
T Consensus 98 ~~~~~~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~ 177 (413)
T 3v7i_A 98 EALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDV 177 (413)
T ss_dssp HHC------CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHH
T ss_pred ccccccccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHH
Confidence 0011111 457889999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHcCCCCccccceec-CccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEE
Q 016111 143 QLTKMLGLNPSVKRVMLY-FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAA 221 (395)
Q Consensus 143 ~l~~~Lgl~~~~~~~~~i-~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA 221 (395)
+|+.+||+++.+ ..+++ +++|+|++.||.+|..++++|+.++||||++|.+|..+ ++.+.+.++.+...+|||||+|
T Consensus 178 ~v~~~LGl~~~~-~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~~~d~~~~~lv~~~LFGDGAaA 255 (413)
T 3v7i_A 178 ALANRLPLRGDT-MLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-QPADDTLESLIVRLLFADTAVA 255 (413)
T ss_dssp HHHHHTTCCTTC-EEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-CSSCCSTTHHHHHHHBCCEEEE
T ss_pred HHHHHhCCCCCc-eEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-CccccchhhhhcceeeccccEE
Confidence 999999999854 26788 99999999999999999999999999999999999854 5655444445568999999999
Q ss_pred EEEecCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc------cCCCCC
Q 016111 222 LIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS------PFGIKD 295 (395)
Q Consensus 222 ~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~------~~gl~~ 295 (395)
+||++++..+ ..+++.+....++|++.+.+.|...+.|+.+.|.++++. +++.++++++++|+ ++|++.
T Consensus 256 vvl~~~~~~~----~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~-~v~~~~~~i~~~L~~~~~~~~~gl~i 330 (413)
T 3v7i_A 256 AVVTGRPRPE----SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPR-AVQETVTAMWEWLRVRYEDDPSSWHP 330 (413)
T ss_dssp EEEESSCCTT----EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH-HHHHHHHHHHHHHHHHTSSSCTTCCC
T ss_pred EEEEecCCCC----CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHH-HHHHHHHHHHHHHhhccccccCCCce
Confidence 9999876522 246776666677888877778888778888888666885 55669999999999 888772
Q ss_pred CCceEEEEcCCChHHHHHHHHHcC--CCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEE
Q 016111 296 WNSLFWIVQPGGPAIVNQIEAKLG--LKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 296 ~~di~~i~hq~~~~~~~~i~~~lg--i~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~ 373 (395)
+ +|++||+|.++++.++++|| +|++|+..+|.+++ ||||+|||+|++|++++ + +++++| |++++++
T Consensus 331 -d--~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~----~~~~~G---d~vll~~ 398 (413)
T 3v7i_A 331 -D--VLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-D----AGQKTG---SRAVLYA 398 (413)
T ss_dssp -C--EEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-H----HCCCTT---CEEEEEE
T ss_pred -e--EEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-h----CCCCCC---CEEEEEE
Confidence 3 89999999999999999999 99999976677899 99999999999999999 5 678999 9999999
Q ss_pred Eccchhhhheeeeec
Q 016111 374 IGAGVTVDTVVLRSF 388 (395)
Q Consensus 374 ~G~G~s~~a~ll~~~ 388 (395)
||+|++|++++|||.
T Consensus 399 fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 399 AAPGLTATALEGEWL 413 (413)
T ss_dssp EETTTEEEEEEEEEC
T ss_pred ECHHHhHhhhheEeC
Confidence 999999999999993
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-56 Score=425.77 Aligned_cols=309 Identities=21% Similarity=0.321 Sum_probs=262.9
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++.+|.|+|+|+|+++++|+++.+.+ ..++ +||.+++||++||++.++++
T Consensus 8 ~~~~~~~~g~ylP~~~v~n~~l~~~~---~~~~---------~~i~~~tGi~~R~~a~~~~~------------------ 57 (323)
T 3il3_A 8 MNSRILSTGSYLPSHIRTNADLEKMV---DTSD---------EWIVTRSGIRERRIAAEDET------------------ 57 (323)
T ss_dssp CEECCCEEEEECCSCEEEHHHHHTTS---SCCH---------HHHHHHTCCCEEECCCTTCC------------------
T ss_pred ccCceeEEEEECCCceEcHHHHHHHh---CCCH---------HHHHHhcCCcEEEECCCCCC------------------
Confidence 56789999999999999999998763 3332 79999999999999987663
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+.+|+.+|++++|+++|+++++||+||++|+++ +..|+.+.+|+.+||+++.+ +++++++|+|++.||.+
T Consensus 58 -------~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~~C~s~~~al~~ 128 (323)
T 3il3_A 58 -------VATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAI--SFDLAAACTGFVYALSV 128 (323)
T ss_dssp -------HHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCE--EEEECCGGGHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCcc--EEEECCccHHHHHHHHH
Confidence 899999999999999999999999999999999 78899999999999997653 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p 249 (395)
|.++|++|..++||||++|.+|.. .++. ++.+.++|||||+|+||++++..++ ..+.+.+.+. ...|
T Consensus 129 A~~~i~~g~~~~vLvvg~e~~s~~-~~~~-----d~~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~s~g~~~~~~~~~ 199 (323)
T 3il3_A 129 ADQFIRAGKVKKALVIGSDLNSRK-LDET-----DRSTVVLFGDGAGAVILEASEQEGI---ISTHLHASADKNNALVLA 199 (323)
T ss_dssp HHHHHHTTSCSEEEEEEEEEGGGS-CCTT-----CTTTTTTBCEEEEEEEEEEESSCCE---EEEEEEECCCCSCSEECC
T ss_pred HHHHHHCCCCCEEEEEEeeccccc-cCcc-----ccccccccccceEEEEEEEcCCCCe---EEEEEEEcCCCcceEEEC
Confidence 999999999999999999999974 3443 2345789999999999998764332 1222322221 1123
Q ss_pred CCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 250 GSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
.... . ....+ .+.| |+++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|++.
T Consensus 200 g~~~--~--~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~ 273 (323)
T 3il3_A 200 QPER--G--IEKSG-YIEMQGNETFKLAVRELSNVVEETLLANNLDK-KDLDWLVPHQANLRIITATAKKLEMDMSQVVV 273 (323)
T ss_dssp CCCT--T--CSSCS-CCEECHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTCCEEEECCSCHHHHHHHHHHTTCCGGGBCC
T ss_pred CCCC--C--CCCCC-cEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhc
Confidence 2111 0 01112 2445 889999999999999999999999997 999 9999999999999999999999999987
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 274 ---~l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 274 ---TLDKYANNSAATVPVALDEAIRD----GRIQRG---QLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp ---CHHHHCBCGGGHHHHHHHHHHHT----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred ---cHhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 49999999999999999999998 899999 999999999999999999998
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=432.24 Aligned_cols=316 Identities=18% Similarity=0.279 Sum_probs=266.7
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.|+|+|+|+++++|+++.+.++ ..+ .+||.+++||++||++.+++
T Consensus 29 ~~v~I~gig~~lP~~~v~n~~l~~~~~--~~~---------~~~i~~~tGI~~R~~a~~~~------------------- 78 (365)
T 3gwa_A 29 PRAAIADIAGHLPEQVLTNDVLAQLYP--DWP---------AEKILAKTGIRERRIAAPRE------------------- 78 (365)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHHHCT--TCC---------HHHHHHHHCCCEEEECCTTC-------------------
T ss_pred ccEEEEEEEEeCCCcEEcHHHHHHHcc--CCC---------HHHHHHhcCccEEEECCCCC-------------------
Confidence 358999999999999999999998742 112 28999999999999998766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
++.+|+.+|++++|+++|+++++||+||++|+++ +..|+.+.+|+.+||++... ++++++++|+|++.||.+
T Consensus 79 ------~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~C~s~~~Al~~ 151 (365)
T 3gwa_A 79 ------TAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHA-GALDVNLGCSGYVYGLSL 151 (365)
T ss_dssp ------CHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTS-EEEEEECSTTHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc-eEEEecccChHHHHHHHH
Confidence 3899999999999999999999999999999998 78899999999999998433 389999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC--CCCCCCceEEEeeee----ee
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT--TLSEKPLFQIVSGAQ----TI 247 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~--~~~~~~~~~~~~~~~----~~ 247 (395)
|.++|++|..++|||+++|.+|.. .++. ++.+..+|||||+|+||++++.. ++ ..+.+.+.+. ..
T Consensus 152 A~~~i~~g~~~~vLvvg~e~~s~~-~~~~-----dr~~~~lfGDGAaA~vl~~~~~~~~~i---~~~~~~s~g~~~~~~~ 222 (365)
T 3gwa_A 152 AKGLVETGAARCVLLLTADTYSKY-LHPL-----DKSVRTLFGDGASATAVIAEHGELERI---GPFVFGTDGRGAPNLI 222 (365)
T ss_dssp HHHHHHTTSCSEEEEEEEECGGGG-SCTT-----CHHHHTTBCCEEEEEEEEEECSSSCSE---EEEEEEECGGGGGGEE
T ss_pred HHHHHHcCCCCEEEEEEEchhhcc-CCcc-----cccccccccceeEEEEEEecCCCCCce---EEEEEEEcCCCCCeEE
Confidence 999999999999999999999974 3443 34467899999999999987653 11 1233333322 11
Q ss_pred c-------CCCcCccceEEecCc-----eEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH
Q 016111 248 L-------PGSDSDVAGQFREMG-----LTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 248 ~-------p~~~~~~~~~~~~~g-----~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
. |.+.+.+.|.....+ ..+.| |+++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.
T Consensus 223 ~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~ 301 (365)
T 3gwa_A 223 VKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPR-ENIDCFVLHQANRFMLDA 301 (365)
T ss_dssp ECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHH
T ss_pred ecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHH
Confidence 2 222222333322211 23555 899999999999999999999999997 999 99999999999999
Q ss_pred HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 314 IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 314 i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||+|+||++. ++++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 302 ~~~~Lgl~~ek~~~---~l~~~GNtssAsipl~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 302 LRKKMKIPEHKFPV---LMEHCGNTVSSTLPLALETMRAN----GTLARG---MRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHHHTCCGGGSCC---CCTTTCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHhCCCHHHHHH---HHhcccchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 99999999999986 59999999999999999999998 899999 999999999999999999998
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=435.37 Aligned_cols=343 Identities=19% Similarity=0.274 Sum_probs=274.5
Q ss_pred cCCCCCeEEEeeeeeCCCcccccccHHHHHHhh---ccCCchhHHHH---------HHHHHHHhcCcceeeeeecchhhh
Q 016111 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRV---TNSDHMTLLKQ---------KFKRICEKSNVKKRYFHVTEDILK 78 (395)
Q Consensus 11 ~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~---~~~~~~~~~~~---------~~~~i~~~~Gi~~R~~~~~~~~~~ 78 (395)
+++-.+++|.|+|+|+|+++++|+|+.+.+... .++++.+++++ ..+||.+++||++||++.+++.++
T Consensus 19 ~~~~~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~ 98 (392)
T 3led_A 19 FQGVRPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVD 98 (392)
T ss_dssp CCBCCCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGC
T ss_pred ecccCceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccc
Confidence 888889999999999999999999998865321 01111111110 138999999999999998765332
Q ss_pred cCCCCcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccc
Q 016111 79 KNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRV 157 (395)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~ 157 (395)
| ++..|.+++|++.+.+.+.+|+++|+++||+++|+++++||+||++|+++ +..|+.+++|+.+||++ .+ +
T Consensus 99 --~---~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~--~ 170 (392)
T 3led_A 99 --P---DVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GF--A 170 (392)
T ss_dssp --T---TTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SE--E
T ss_pred --c---cccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-Ce--E
Confidence 1 23456677777777777899999999999999999999999999999998 88999999999999995 33 8
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCc
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPL 237 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~ 237 (395)
++++++|+|++.||.+|.++|++|..++||||++|.+|. +.++.+ +.+..+|||||+|+||++++... ..
T Consensus 171 ~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~d-----r~t~~lFGDGA~A~vl~~~~~~~----~~ 240 (392)
T 3led_A 171 FDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRD-----RDSHFIFGDVATAAIVERADDAQ----GG 240 (392)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TTTTTTBCEEEEEEEEEEGGGCC----SS
T ss_pred EEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCc-----ccCCcccccccEEEEEEecCCCC----CC
Confidence 999999999999999999999999999999999999997 444432 33578999999999999876421 12
Q ss_pred eEEEeeeeee-------cCCC------cCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE
Q 016111 238 FQIVSGAQTI-------LPGS------DSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI 302 (395)
Q Consensus 238 ~~~~~~~~~~-------~p~~------~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 302 (395)
+.+.+..... .+.. .+...+ ....+.| |+++|+++.+.++++++++|+++|+++ +|| +|+
T Consensus 241 ~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~dId~~v 315 (392)
T 3led_A 241 WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDK----ADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDP-HGLKRMW 315 (392)
T ss_dssp EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTS----GGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEE
T ss_pred CeEEEEEEEEccccccccCCCcccCCCcccccc----ccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCcEEE
Confidence 3333221110 0110 001111 1123555 789999999999999999999999997 999 999
Q ss_pred EcCCChHHHHHHHHHc-C--CCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 303 VQPGGPAIVNQIEAKL-G--LKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 303 ~hq~~~~~~~~i~~~l-g--i~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
+||+|.++++.++++| | +|.+|++. ++++||||++||+|++|+++ . +++++| |+|+|++||+|++
T Consensus 316 ~Hqan~~i~~~~~~~llgl~~~~~k~~~---~l~~~GNtssAsipl~L~~~--~----~~~~~G---d~vll~gfG~G~t 383 (392)
T 3led_A 316 LHQANINMNEIIGRKVLGRDPTRDENVI---ILDDYANTSSAGSIIAFHKH--Q----DDMAQG---DLGLICSFGAGYS 383 (392)
T ss_dssp ECSSCHHHHHHHHHHHHTSCCCTTTBCC---CHHHHCBCGGGHHHHHHHHC--C----TTCCTT---CEEEEEEEETTTE
T ss_pred EcCCCHHHHHHHHHHhcCCCCCHHHHHH---HHhhhCccHHHHHHHHHHHH--h----CCCCCC---CEEEEEEEChhhE
Confidence 9999999999999996 6 57888876 59999999999999999985 3 679999 9999999999999
Q ss_pred hhheeeeec
Q 016111 380 VDTVVLRSF 388 (395)
Q Consensus 380 ~~a~ll~~~ 388 (395)
|++++|||.
T Consensus 384 ~~~~ll~~~ 392 (392)
T 3led_A 384 AGTVFVQKR 392 (392)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999984
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-55 Score=426.33 Aligned_cols=317 Identities=17% Similarity=0.246 Sum_probs=266.0
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.+. .+ ..+||.+++||++||++.+++
T Consensus 16 ~v~I~~ig~~lP~~~v~n~~l~~~~~---~~--------~~~~i~~~tGI~~R~~a~~~~-------------------- 64 (354)
T 4efi_A 16 GARIAGVVSCVPSKQVDNDYFVERFD---AS--------AVRDVVKMIGVNRRRWADAQT-------------------- 64 (354)
T ss_dssp SEEEEEEEEEECSCEEEGGGGTTTSC---HH--------HHHHHHHHHCCSEEECCCTTC--------------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhC---CC--------cHHHHHHhcCCeEEEEcCCCC--------------------
Confidence 68999999999999999999987631 11 137999999999999998766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+++|+++||+++|+++++||+||++|+++ +..|+.+.+|+++||++... ++++++++|+|++.||.+|
T Consensus 65 -----~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~aC~s~~~al~~A 138 (354)
T 4efi_A 65 -----SAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASC-LALDINLGCSGYPQALWLG 138 (354)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTS-EEEEECCCTTHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCc-cEEeeCcccHHHHHHHHHH
Confidence 3899999999999999999999999999999998 88999999999999996433 3899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecCC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILPG 250 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 250 (395)
.++|++|..++|||+++|.+|.. .++. ++.+..+|||||+|+||++++..+. ..+.+.+.+. ..+|.
T Consensus 139 ~~~i~~g~~~~vLvvg~e~~s~~-~~~~-----d~~~~~lfGDGA~A~vl~~~~~~~~---~~~~~~s~g~~~~~~~~~~ 209 (354)
T 4efi_A 139 MNLIQTGAAKRVLLAVGDTISKM-IDPT-----DRSTSLLFGDAGTMTALETSNGDAA---AHFIIGADGKGARNLIVPS 209 (354)
T ss_dssp HHHHHTTSCSEEEEEEEECGGGG-CCTT-----CHHHHTTBCCEEEEEEEEECCSCCE---EEEEEEECGGGGGGEECCS
T ss_pred HHHHHCCCCCEEEEEEechhccc-CCcc-----ccccccccccceeEEEEeecCCCCc---eEEEEEEcCCCcceEEecC
Confidence 99999999999999999999973 3443 3446899999999999999775432 1244444332 12222
Q ss_pred Cc------Cc-cceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016111 251 SD------SD-VAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLK 321 (395)
Q Consensus 251 ~~------~~-~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~ 321 (395)
.. +. ..+..+. ...+.| |+++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|
T Consensus 210 ~g~~p~~~~~~~~~~~~~-~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~Lgl~ 287 (354)
T 4efi_A 210 GGFKPYDAAADERMAGKS-PECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK-DSYDAFLFHQANLFMLKHLAKKAGLP 287 (354)
T ss_dssp SSSSCCCGGGCGGGTTCC-TTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHTTCC
T ss_pred CCCCCCcccccccccccc-ccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHhCcC
Confidence 11 10 0010111 113455 789999999999999999999999997 999 9999999999999999999999
Q ss_pred ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 322 ~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
++|++. ++++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||.+.
T Consensus 288 ~ek~~~---~l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 288 AERVPV---NIGEYGNTSCASIPLLITTELKD----RLKEET---LQLGMFGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp GGGSCC---CHHHHCBCGGGHHHHHHHHHSHH----HHHHSC---EEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHHHHH---HHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheeeEEEECCc
Confidence 999987 49999999999999999999987 789999 999999999999999999999864
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-54 Score=423.04 Aligned_cols=324 Identities=20% Similarity=0.244 Sum_probs=262.2
Q ss_pred ccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcC
Q 016111 6 DGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICA 85 (395)
Q Consensus 6 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 85 (395)
.++|+-.-..+++|.++|+|+|+++++|+++.+.+ ..++ +||.+++||++||++.+++.
T Consensus 15 ~~~~~~~~~~~~~I~~~g~~~P~~~v~~~~l~~~~---~~~~---------~~i~~~tGi~~R~~a~~~~~--------- 73 (359)
T 3h78_A 15 RGSENLYFQGNPILAGLGFSLPKRQVSNHDLVGRI---NTSD---------EFIVERTGVRTRYHVEPEQA--------- 73 (359)
T ss_dssp ---------CCCEEEEEEEECCSEEEEHHHHTTTS---SCCH---------HHHHHHHCCCEEEECCTTCC---------
T ss_pred chhhhcCCCCCcEEEEEEEECCCceEcHHHHHHHh---CCCH---------HHHHHhcCceEEEEcCCCCC---------
Confidence 35555556678999999999999999999998764 2222 78999999999999987663
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccc
Q 016111 86 YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGC 164 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C 164 (395)
..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+|+.+||+++.+ +++++.+|
T Consensus 74 ----------------~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC 135 (359)
T 3h78_A 74 ----------------VSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--VLDIRAQA 135 (359)
T ss_dssp ----------------THHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--EEEEECGG
T ss_pred ----------------HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--EEEECCHh
Confidence 899999999999999999999999999999998 78899999999999998654 89999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC-C-CCCCCCceEEEe
Q 016111 165 YIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD-T-TLSEKPLFQIVS 242 (395)
Q Consensus 165 ~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~-~-~~~~~~~~~~~~ 242 (395)
+|++.||.+|..+|++|..++||||++|.+|.. .++.+. .+.+.++|||||+|+||++++. . ++ ..+.+.+
T Consensus 136 ~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-~~~~d~---~~~t~~lfGDGAaA~vl~~~~~~~~~i---~~~~~~s 208 (359)
T 3h78_A 136 SGLLYGLQMARGQILAGLARHVLVVCGEVLSKR-MDCSDR---GRNLSILLGDGAGAVVVSAGESLEDGL---LDLRLGA 208 (359)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGG-CCCSTT---THHHHTTBCEEEEEEEEECCSCSSSEE---EEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCcCEEEEEEEchhccc-CCcccc---cccccceecceeEEEEEEecCCCCCce---EEEEEEE
Confidence 999999999999999999999999999999974 344331 1446789999999999998764 2 21 1123333
Q ss_pred eee----eecCC-CcCccc-----eEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHH
Q 016111 243 GAQ----TILPG-SDSDVA-----GQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAI 310 (395)
Q Consensus 243 ~~~----~~~p~-~~~~~~-----~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~ 310 (395)
.+. ..+|. ...... +.....+ .+.| |+++|+++.+.++++++++|+++|+++ +|| +|++||+|.++
T Consensus 209 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i 286 (359)
T 3h78_A 209 DGNYFDLLMTAAPGSASPTFLDENVLREGGG-EFLMRGRPMFEHASQTLVRIAGEMLAAHELTL-DDIDHVICHQPNLRI 286 (359)
T ss_dssp CGGGGGGEEBCCSSTTSSSTTCHHHHHTTTT-SCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHH
T ss_pred ccCccceEEeCCCCCccCCccccccccccCC-ceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHH
Confidence 221 12232 100000 0001112 2445 889999999999999999999999997 999 99999999999
Q ss_pred HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 311 VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 311 ~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++.++++||+|++|++. ++++||||++||+|++|++++++ +++| |+|++++||+|++|++++|||++
T Consensus 287 ~~~~~~~lgl~~ek~~~---~l~~~GNt~sAsi~l~L~~~~~~------l~~G---d~vll~~fG~G~t~~~~ll~~~~ 353 (359)
T 3h78_A 287 LDAVQEQLGIPQHKFAV---TVDRLGNMASASTPVTLAMFWPD------IQPG---QRVLVLTYGSGATWGAALYRKPE 353 (359)
T ss_dssp HHHHHHHHTCCGGGBCC---CHHHHCBCGGGHHHHHHHHHGGG------SCTT---CEEEEEEEETTTEEEEEEEECC-
T ss_pred HHHHHHHhCcCHHHhhh---hhhcccchHHHHHHHHHHHHHHh------CCCC---CEEEEEEEchhhhheeeeEEehh
Confidence 99999999999999987 49999999999999999999874 7899 99999999999999999999954
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-54 Score=414.23 Aligned_cols=310 Identities=18% Similarity=0.276 Sum_probs=258.8
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
.++++|.|+|+|+|+++++|+++.+.+ ..++ +||.+++||++||++.+++
T Consensus 2 ~~~~~I~~~g~~lP~~~v~n~~~~~~~---~~~~---------~~i~~~~Gi~~R~~a~~~e------------------ 51 (321)
T 3il6_A 2 KNYARISCTSRYVPENCVTNHQLSEMM---DTSA---------AWIHSRTGISERRIVTQEN------------------ 51 (321)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHHHHT---TSCH---------HHHHHHHSCSEEECCSSCC------------------
T ss_pred CCcEEEEEEEEECCCcEEcHHHHHHHh---CCCh---------hhhhhhcCceEEEECCCCC------------------
Confidence 357999999999999999999998874 2332 7999999999999997755
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
+.+|+.+|+++||+++|+++++||+||++|+++ +..|+.+.+|+++||+++. ++++++++|+|++.||.
T Consensus 52 --------~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~--~~~~v~~aC~s~~~al~ 121 (321)
T 3il6_A 52 --------TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEA--FAFDISAACSGFVYALS 121 (321)
T ss_dssp --------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTC--EEEEECCGGGHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCc--eEEEeCcccHHHHHHHH
Confidence 789999999999999999999999999999998 8899999999999999874 38999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eec
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~ 248 (395)
+|..+|++|..++|||+++|.+|. +.++. ++.+..+|||||+|+||++++..++ ..+.+.+.+. ...
T Consensus 122 ~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~-----dr~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~s~~~~~~~~~~ 192 (321)
T 3il6_A 122 MAEKLVLSGRYQTGLVIGGETFSK-MLDWT-----DRSTAVLFGDGAAGVLIEAAETPHF---LNEKLQADGQRWTALTS 192 (321)
T ss_dssp HHHHHHHTSSCCCEEEEEEECGGG-GSCTT-----CTTTGGGBCCEEEEEEEEEESSCCE---EEEEEEECGGGGGGEEC
T ss_pred HHHHHHHCCCCCEEEEEEEccccc-cCCcc-----ccccceeeccccEEEEEEEcCCCCE---EEEEEEEcCCCCCeEEe
Confidence 999999999999999999999997 44454 3345789999999999998765432 1223333321 122
Q ss_pred CCCcCccceEEe---cCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016111 249 PGSDSDVAGQFR---EMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ 323 (395)
Q Consensus 249 p~~~~~~~~~~~---~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e 323 (395)
|.......|... ..+ .++| ++++|+++.+.++++++++|+ + +|| +|++||+|.++++.++++||+|+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~-----~-~did~~v~Hq~~~~i~~~~~~~lgl~~e 265 (321)
T 3il6_A 193 GYTINESPFYQGHKQASK-TLQMEGRSIFDFAIKDVSQNILSLVT-----D-ETVDYLLLHQANVRIIDKIARKTKISRE 265 (321)
T ss_dssp CCCCCCSTTCCCCCCCCC-SCEECHHHHHHHHHHHHHHHHHTTCC-----G-GGCSEEEECCSCHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCCCCcccccccc-ceeechHHHHHHHHHHHHHHHHHHcC-----c-ccCCEEEEcCCCHHHHHHHHHHcCcCHH
Confidence 322111122111 122 2555 789999999999999999998 5 889 999999999999999999999999
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
|++. ++++||||++||+|++|++++++ |++++|. .|+|++++||+|++|++++||+
T Consensus 266 k~~~---~l~~~GNt~sasi~~~L~~~~~~----g~~~~G~-~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 266 KFLT---NMDKYGNTSAASIPILLDEAVEN----GTLILGS-QQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp GBCC---CGGGTCBCGGGHHHHHHHHHHHT----TSSCTTS-CCEEEEEEEETTTEEEEEEEEC
T ss_pred Hhhh---hHhhcccHHHHHHHHHHHHHHHh----CCCCCCC-CCEEEEEEEehhheeEEEEEEC
Confidence 9986 59999999999999999999998 8899881 1599999999999999999984
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-54 Score=418.07 Aligned_cols=316 Identities=22% Similarity=0.289 Sum_probs=264.2
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHh--hccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCCh
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFR--VTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSL 91 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
.++++|.|+|+|+|+++++|+++.+.+.. ...+ .+||.+++||++||++.+++
T Consensus 9 ~m~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~---------~~~i~~rtgi~~r~~~~~~~---------------- 63 (333)
T 4dfe_A 9 TIYSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETS---------DEWIVARTGIHARYFAEPDV---------------- 63 (333)
T ss_dssp CCEEEEEEEEEECCSEEEEHHHHHHHHC---CCCC---------HHHHHHHHCCSEEEECCTTC----------------
T ss_pred ccceEEEEEEEECCCcEEcHHHHHHHhccccCCCC---------HHHhHHhcCceEEEEcCCCC----------------
Confidence 35799999999999999999999987522 1112 27899999999999997766
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHH
Q 016111 92 DSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATA 170 (395)
Q Consensus 92 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~a 170 (395)
+..+|+.+|+++||+++|+++++||+||++|+++ +..|+.+.+|+.+||++... ++++++.+|+|++.|
T Consensus 64 ---------~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~-~~~~v~~~C~s~~~a 133 (333)
T 4dfe_A 64 ---------TTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHG-AAFDVQAVCSGFAYA 133 (333)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCC-EEEEEECGGGHHHHH
T ss_pred ---------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCC-cEEEeCcccHHHHHH
Confidence 3899999999999999999999999999999998 78899999999999995443 389999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----e
Q 016111 171 IRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----T 246 (395)
Q Consensus 171 L~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~ 246 (395)
|.+|.++|++|+.++|||+++|.+|..+ ++. ++.+.++|||||+|+||++.+..++ ..+.+.+.+. .
T Consensus 134 l~~A~~~i~~g~~~~vLvvg~e~~s~~~-~~~-----d~~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~~~g~~~~~~ 204 (333)
T 4dfe_A 134 VATADSFIRSGQHRTALVIGAETFSRIL-DFK-----DRTTCVLFGDGAGAVILQASDEPGV---LASALHADGSHSNIL 204 (333)
T ss_dssp HHHHHHHHHTTSCSEEEEEEEEEGGGGC-CTT-----CTTTTTTBCEEEEEEEEEEESSCSE---EEEEEEECGGGGGGE
T ss_pred HHHHHHHHHcCCCCEEEEEEeecccccc-Ccc-----cccceeeeccccEEEEEEEcCCCCe---EEEEEEEccCCcCeE
Confidence 9999999999999999999999999743 343 2345789999999999998765332 1233333221 1
Q ss_pred ecCCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 247 ILPGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 247 ~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
..|... ..+.....+ .+.| |+++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|
T Consensus 205 ~~~~~~--~~~~~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~~ 280 (333)
T 4dfe_A 205 CTPGNV--NGGVVSGSA-FLHMDGQAVFKLAVNVLEKVAVEALEKANLSA-EQIDWLIPHQANIRIMQSTCRKLGLPQER 280 (333)
T ss_dssp EBCEEE--ETTEEEECC-SCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGG
T ss_pred EECCCC--CCcccccCc-ceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHH
Confidence 112110 001112222 2445 889999999999999999999999997 999 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++. ++++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 281 ~~~---~l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 281 MIV---TVGEHGNTSAASIPLALDVAVRD----GRIKRG---QNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp BCC---CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hhh---hHHhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 987 49999999999999999999998 899999 999999999999999999998
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=409.49 Aligned_cols=352 Identities=27% Similarity=0.508 Sum_probs=291.2
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.|+|+|+|+++++|+++.+.+......+ .+..+..+||.+++||++||++.++. ..+|.+ ..+++.+
T Consensus 11 ~~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~---~~~~~~~ 83 (374)
T 2h84_A 11 NNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHLVRDYT--KPENSI---KFRHLET 83 (374)
T ss_dssp -CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSC--HHHHHHHHHHHHTTCCCEECCSSCTT--SGGGCG---GGGGGCC
T ss_pred CCCeEEEEEEEeCCCcccCHHHHHHHHHHhhccC--hHHHHHHHHHHHhCCcCcceeecCcc--cccccc---ccCChHH
Confidence 3479999999999999999999998764322111 22334557899999999999986641 112222 1235566
Q ss_pred HHHH---HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccchhHHH
Q 016111 94 RQDI---LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGAT 169 (395)
Q Consensus 94 ~~~~---~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~~ 169 (395)
+++. +.+...+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+.+||+++.. ++++++ ++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~aCss~~~ 162 (374)
T 2h84_A 84 ITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDV-ERVSLNLMGCLAGLS 162 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTC-EEEEEESCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCC-ceEEecCCcCHHHHH
Confidence 6666 889999999999999999999999999999999999987899999999999998743 278896 89999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
||.+|.++|++|..++|||+++|.++..+.+|. ++.....+++|||||+|+||++.+... ....+++.+.+..+.|
T Consensus 163 al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~--dr~~~~~~~lfGDGA~A~vL~~~~~~~--~~~~~~l~~~g~~~~~ 238 (374)
T 2h84_A 163 SLRTAASLAKASPRNRILVVCTEVCSLHFSNTD--GGDQMVASSIFADGSAAYIIGCNPRIE--ETPLYEVMCSINRSFP 238 (374)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEEECCGGGCCCSS--SHHHHHHHHHBCCEEEEEEEESSCCTT--CCCCEEEEEEEEEECS
T ss_pred HHHHHHHHHHcCCCCEEEEEEEEecchhhcCCC--CHHHHhhhhhhccCcEEEEEecCCCcc--cCCceeEEeeeeEEeC
Confidence 999999999999999999999999987443443 233334589999999999999876421 0124677776666677
Q ss_pred CCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC------CCCCCce-EEEEcCCChHHHHHHHHHcCCCc
Q 016111 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG------IKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ 322 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g------l~~~~di-~~i~hq~~~~~~~~i~~~lgi~~ 322 (395)
.+.+.+.|...++|+.+.+++++++++.+.+.++++++|+++| +++ +|| +| +||+|.++++.+++.||++.
T Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~-~did~~-~H~~~~~i~d~~~~~lgl~~ 316 (374)
T 2h84_A 239 NTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISA-KDCEFL-IHTGGKSILMNIENSLGIDP 316 (374)
T ss_dssp SCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCS-SSSEEE-ECCCCHHHHHHHHHHTTCCG
T ss_pred CCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCCh-hhcCEe-ECCCCHHHHHHHHHHcCCCH
Confidence 7665556666677776667899999999999999999999999 997 999 88 99999999999999999999
Q ss_pred cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 323 QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 323 e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+|+..++.++++||||++||+|++|++++++ ++ +| |+|++++||+|++|++++|||.
T Consensus 317 ~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~----~~--~G---d~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 317 KQTKNTWDVYHAYGNMSSASVIFVMDHARKS----KS--LP---TYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp GGGHHHHHHHHHHCBCTTHHHHHHHHHHHTC----SC--CC---SEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCchhhHHHHHHHHHHhh----cC--CC---CeEEEEEeccchhhhhhhheec
Confidence 9998666689999999999999999999987 65 78 9999999999999999999985
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=413.81 Aligned_cols=324 Identities=14% Similarity=0.152 Sum_probs=262.2
Q ss_pred cccCCCCCeEEEeeeeeCCCcccccccHHHHHHhh----ccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCc
Q 016111 9 NQQQGGGLATILAIGTANPPNCIYQADYPDYYFRV----TNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNIC 84 (395)
Q Consensus 9 ~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 84 (395)
|.+-...+++|.|+|+|+|+++++|+++.+.+... +.++ +||.+++||++||++.+++
T Consensus 5 ~~~m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~---------~~i~~~tGi~~R~~~~~~~--------- 66 (345)
T 3s21_A 5 GSHMLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT---------DVLGDVAGIHARRLWDQDV--------- 66 (345)
T ss_dssp GGGGSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC---------CHHHHTTCCSEEEECSSCC---------
T ss_pred CccceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH---------HHHHHhhCceeEEECCCCC---------
Confidence 44444567999999999999999999998875321 1222 7899999999999997766
Q ss_pred CCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCcc
Q 016111 85 AYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQG 163 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~ 163 (395)
++.+|+.+|++++|+++|+++++||+||++|+++ +..|+.+.+|+++||+++.. ++++++.+
T Consensus 67 ----------------~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~a 129 (345)
T 3s21_A 67 ----------------QASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHC-MTFDVANA 129 (345)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTC-EEEECCCG
T ss_pred ----------------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCc-eEEeECCc
Confidence 3899999999999999999999999999999998 88899999999999998543 38999999
Q ss_pred chhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCC------CC-Cc---hhhhhhhhhccccEEEEEecCCCCCCC
Q 016111 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPS------DA-NL---GCLAGQALFGDGAAALIIGANPDTTLS 233 (395)
Q Consensus 164 C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~------~~-~~---~~~~~~~~fGDgAaA~vl~~~~~~~~~ 233 (395)
|+|++.||.+|.++|++|.+++|||+++|.+|..+ ++. +. .. +......+|||||+|+||++.+....
T Consensus 130 C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~- 207 (345)
T 3s21_A 130 CLAFINGMDIAARMLERGEIDYALVVDGETANLVY-EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD- 207 (345)
T ss_dssp GGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHH-HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT-
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhh-ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC-
Confidence 99999999999999999999999999999998532 111 10 00 11234689999999999998764210
Q ss_pred CCCceEEEeeeeeecCCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHH
Q 016111 234 EKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV 311 (395)
Q Consensus 234 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~ 311 (395)
..++.+......+...+...+. .+ .+.| ++.+++++.+.++++++++|+++|+++ +|| +|++||+|.+++
T Consensus 208 ---~~~i~~~~~~~~~~~~~~~~~~--~~--~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~ 279 (345)
T 3s21_A 208 ---APRYKGGVTRSATEWNKLCRGN--LD--RMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAV-EELDQFVIHQVSRPHT 279 (345)
T ss_dssp ---SCEEEEEEEEECGGGTTC---------------CHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSCHHHH
T ss_pred ---CcceeeeccccCcchhhhcccc--Cc--ceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHH
Confidence 1333332221111111111111 01 2445 789999999999999999999999997 999 999999999999
Q ss_pred HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 312 ~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+.++++||+|+||++. ++++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 280 ~~~~~~lgl~~ek~~~---~l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 280 AAFVKSFGIDPAKVMT---IFGEHGNIGPASVPIVLSKLKEL----GRLKKG---DRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp HHHHHHHTCCGGGBCC---CHHHHCBCGGGHHHHHHHHHHHH----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHcCcCHHHcee---eHhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhhhheEEEEEC
Confidence 9999999999999886 58999999999999999999998 899999 999999999999999999998
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-52 Score=411.36 Aligned_cols=348 Identities=23% Similarity=0.362 Sum_probs=289.5
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.|+|+|+|+++++|+++.+.+.... .+.+. .+..+||.+++||++||++.+.+.. ...+++.++
T Consensus 8 ~m~~I~gig~~~P~~~v~~~~l~~~~~~~~-~~~~~--~~~~~~i~~~~GI~~R~~~~~~~~~--------~~~~~~~~r 76 (382)
T 1u0m_A 8 FMATLCRPSVSVPEHVITMEETLELARRRH-TDHPQ--LPLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDR 76 (382)
T ss_dssp --CEECCCEEECCSEEEEHHHHHHHHHHHH-TTCTT--HHHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHH
T ss_pred cceEEEEEEEeCCCcccCHHHHHHHHHHhc-cChhh--HHHHHHHHHhcCCCcceeecChhhh--------ccCCChhHH
Confidence 458999999999999999999998764321 11110 1245789999999999998764421 134778999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~aL~~ 173 (395)
++.+.+...+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+.+||++... +++++ +++|+|++.||.+
T Consensus 77 ~~~~~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~aCss~~~Al~~ 155 (382)
T 1u0m_A 77 NKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTT-RQIPIAQLGCAAGGAAINR 155 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTC-EEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCc-ceEEccCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999987899999999999998743 27888 8999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDS 253 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 253 (395)
|.++|++|..++|||+++|.++.. .+|.+.+++....+++|||||+|+||++.+.. .+++........+.+.+
T Consensus 156 A~~~i~~g~~~~vLv~g~e~~s~~-~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~------g~~i~~~~~~~~~~~~~ 228 (382)
T 1u0m_A 156 AHDFCTAYPEANALIVACEFCSLC-YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT------GVRLERNGSYLIPKTED 228 (382)
T ss_dssp HHHHHHHSTTCEEEEEEEEEGGGG-CCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS------EEEEEEEEEEECSSCTT
T ss_pred HHHHHHcCCCCEEEEEEEeccchh-cCcccCCHHHhhccchhcCCcEEEEEeccCCC------CcEEEEeeeEecCChHH
Confidence 999999999999999999999863 44554333333347899999999999976542 24555443333454444
Q ss_pred ccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHH
Q 016111 254 DVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVL 332 (395)
Q Consensus 254 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~ 332 (395)
...|.....|+++.+++++++.+.+.++ +++++|+++|+++ +|| +|++||+|.++++.+++.||++++|+..++.++
T Consensus 229 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~-~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~ 306 (382)
T 1u0m_A 229 WIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATL 306 (382)
T ss_dssp TEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHH
T ss_pred hcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4445555556666778889988888999 9999999999997 999 999999999999999999999999998766789
Q ss_pred HhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 333 SEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
++||||++||+|++|++++++ +++++| |++++++||+|++|++++|||.+.
T Consensus 307 ~~~Gnt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 307 TEYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp HHTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEECC
T ss_pred HHhCCchhhHHHHHHHHHHHh----cCCCCC---CEEEEEEEcccceeEEEEEEEeec
Confidence 999999999999999999998 889999 999999999999999999999753
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-52 Score=411.30 Aligned_cols=359 Identities=24% Similarity=0.408 Sum_probs=290.9
Q ss_pred CCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeee-eecchhhhcCCCCcCCCCCCh
Q 016111 13 GGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF-HVTEDILKKNPNICAYDGSSL 91 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~-~~~~~~~~~~~~~~~~~~~~~ 91 (395)
|.++++|.++|+|+|+++++|+++.+.+.. .+..+..++..+||.+++||++||+ +.+.+. ++.+.....+.+
T Consensus 29 ~~~~~~I~~ig~~~P~~~v~n~~l~~~~~~---~~~~~~~~~~~~~i~~~tGI~~R~~~a~~~~~---~~~~~~~~p~~~ 102 (393)
T 1ted_A 29 PTTVAVIEGLATGTPRRVVNQSDAADRVAE---LFLDPGQRERIPRVYQKSRITTRRMAVDPLDA---KFDVFRREPATI 102 (393)
T ss_dssp CCCEEEEEEEEEECCSCEEEHHHHHHHHHT---C----CCTTHHHHHHHTSCCSEEECSSCTTST---THHHHTTCSSCH
T ss_pred CCcccEEEEeeeeCCCcccCHHHHHHHHHH---hcccccHHHHHHHHHHhCCcCcceeeecChHh---cccccccCCCCH
Confidence 445589999999999999999999987642 1100000123579999999999999 865321 000000112456
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHHH
Q 016111 92 DSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGATA 170 (395)
Q Consensus 92 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~a 170 (395)
.+|++.+.+...+|+.+|+++||+++|+++++||+||++|++++..|+.+.+|+.+||++..+ +.+++ +++|+|++.|
T Consensus 103 ~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~~aCas~~~A 181 (393)
T 1ted_A 103 RDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSI-SRVVVNFMGCAAAMNA 181 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTC-EEEEEESCGGGHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCc-ceeEeccchhHHHHHH
Confidence 889999999999999999999999999999999999999999977899999999999998753 25777 8999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCC-ceEEEeeeeeecC
Q 016111 171 IRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKP-LFQIVSGAQTILP 249 (395)
Q Consensus 171 L~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~-~~~~~~~~~~~~p 249 (395)
|.+|.++|++|..++|||+++|.++..+ ++ +.++.+..++++|||||+|+||++.+.... ... ..++...+..+.+
T Consensus 182 l~~A~~~i~~G~~~~vLv~g~e~~s~~~-~~-~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~-~~~~~~~i~~~~~~~~~ 258 (393)
T 1ted_A 182 LGTATNYVRAHPAMKALVVCIELCSVNA-VF-ADDINDVVIHSLFGDGCAALVIGASQVQEK-LEPGKVVVRSSFSQLLD 258 (393)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEECGGGC-CC-CSSHHHHHHHHHBCEEEEEEEEEEECTTSC-CCTTCEEEEEEEEEECT
T ss_pred HHHHHHHHHcCCCCEEEEEEEEeccccC-CC-CCCHHHhhhhhhhcCccEEEEEecCCCccc-cCcceeeeeccceEEcC
Confidence 9999999999999999999999998743 22 223444556899999999999998653210 111 2366655545556
Q ss_pred CCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH
Q 016111 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT 328 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~ 328 (395)
.+.....|.....|+.+..++++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||++.+|+..+
T Consensus 259 d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s 337 (393)
T 1ted_A 259 NTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQS 337 (393)
T ss_dssp TCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHH
T ss_pred CchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCH-hHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHH
Confidence 6544445555555665556899999999999999999999999997 999 99999999999999999999999999877
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHhhhhcCCc-cCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 329 RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV-TTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 329 ~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i-~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
|.++++||||++||+|++|++++++ +++ ++| |+|++++||+|++|++++|||..
T Consensus 338 ~~~~~~~GNt~sAsi~~~L~~~~~~----g~~~~~G---d~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 338 WDVLARFGNMLSVSLIFVLETMVQQ----AESAKAI---STGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp HHHHHHHCBCTHHHHHHHHHHHHHS----CSSSSSS---EEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHhhCCchHhHHHHHHHHHHhc----CccCCCC---CeEEEEEeccchhhhhhheeecc
Confidence 7789999999999999999999998 888 599 99999999999999999999974
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=449.76 Aligned_cols=384 Identities=62% Similarity=1.084 Sum_probs=313.9
Q ss_pred ccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcC
Q 016111 6 DGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICA 85 (395)
Q Consensus 6 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 85 (395)
+.++.....+++.|.|+|+|+|+++++|+++.+.+.+.+.++..+.+++..+++.+++||++||++.+++.....++..+
T Consensus 593 ~~~~~~~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~ 672 (979)
T 3tsy_A 593 EFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGA 672 (979)
T ss_dssp HHHHHHSCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHS
T ss_pred ccchhhcccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCccccc
Confidence 33444566778999999999999999999999986544444433456667788999999999999987664322233345
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccch
Q 016111 86 YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCY 165 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~ 165 (395)
+..+.+..+.+.+.+...+|+.+|+++||+++|+++++||+||++|++++..|+.+++|+++||+++...++++++++|+
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCs 752 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCY 752 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTT
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccH
Confidence 56788999999999999999999999999999999999999999998778899999999999999875434799999999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee
Q 016111 166 IGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ 245 (395)
Q Consensus 166 ~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 245 (395)
|++.||.+|.++|++|.+++||||++|.++..+.+............++|||||+|+||++.+.... ....+.....+.
T Consensus 753 g~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~-~~~~~~~~~~~~ 831 (979)
T 3tsy_A 753 AGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-ERPLFQLVSAAQ 831 (979)
T ss_dssp HHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSS-CCCCEEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccc-cCcceEEEeeee
Confidence 9999999999999999999999999999876554333222334456789999999999998765332 123455555554
Q ss_pred eecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 246 TILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 246 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
...+.......+.....+..+.+++.+++++.+.+.++++++|+++|+++ +|| +|++||+|.++++.++++||++.+|
T Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~k 910 (979)
T 3tsy_A 832 TFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD-WNSLFWIAHPGGPAILDAVEAKLNLDKKK 910 (979)
T ss_dssp EECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHHHHHTCCTTT
T ss_pred EEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC-cccceEEECCCChHHHHHHHHHcCCChHH
Confidence 45555444445555556666666899999999999999999999999998 999 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCCC
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~ 391 (395)
+..+|.++++||||++||+|++|++++++..+.++++.|.+.+++++++||+|++|++++|||.+.+
T Consensus 911 ~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~~ 977 (979)
T 3tsy_A 911 LEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMV 977 (979)
T ss_dssp THHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBCC
T ss_pred HHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhcccc
Confidence 9988888999999999999999999887532223566665567779999999999999999998754
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=393.59 Aligned_cols=316 Identities=17% Similarity=0.180 Sum_probs=246.3
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecch--hhhcCCCCcCCCCCChh
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTED--ILKKNPNICAYDGSSLD 92 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~~~~~~~~~~~~ 92 (395)
.+++|.|+|+|+|+++++|+++... . .. +++.+++||++||++.++| +
T Consensus 4 ~~v~I~g~g~ylP~~~~~~~~~~~~---~--~~---------~~~~~~tGi~~r~~a~~~e~~~---------------- 53 (357)
T 3s3l_A 4 ENLFVSGVAAWLPPLSTAQDAVMAG---L--LD---------PARSKLRGIESVTVASDAEEDA---------------- 53 (357)
T ss_dssp SSCEEEEEEEECCCEEEHHHHHHTT---S--SC---------HHHHHHHCCCEEECCCSSGGGS----------------
T ss_pred CceEEEEEEEECCCCCCHHHHHHhc---C--Cc---------HHHHHHcCceEEEecCCCCCCC----------------
Confidence 4689999999999988877765432 1 11 2345899999999987654 3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATA 170 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~a 170 (395)
+.+|+++|+++||+++|+++++||+||++|++. ...++.+.+|+.+||+++.+ +++++++|+|++.|
T Consensus 54 ---------~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~--~~~v~~aC~~~~~a 122 (357)
T 3s3l_A 54 ---------PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVP--AFGLAQRCNGGMGA 122 (357)
T ss_dssp ---------HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSC--EEEEECGGGHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCc--EEEEcCccHHHHHH
Confidence 899999999999999999999999999999852 22346799999999998654 89999999999999
Q ss_pred HHHHHHHHHcCCCC--eEEEEEeecccc-ccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeee
Q 016111 171 IRMAKDFAENNPGA--RVLVVCSDLSLG-TFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQT 246 (395)
Q Consensus 171 L~~A~~ll~~g~~~--~vLvv~~d~~s~-~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~ 246 (395)
|.+|.++|++|..+ +||||++|.+|. .+.++.+ + +..+|||||+|+||++.+.. ++ ..+.+.+.+..
T Consensus 123 l~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~-----~-~~~lfGDGA~A~vl~~~~~~~~i---~~~~~~s~g~~ 193 (357)
T 3s3l_A 123 IELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNS-----V-DVTMYGDGAAALVLSTRDGFARV---LSTATGVDNSL 193 (357)
T ss_dssp HHHHHHHHHTTSSSSSEEEEEEEECCCTTTCCTTTS-----S-SSCCBCCEEEEEEEESSCCSEEE---EEEEEEECGGG
T ss_pred HHHHHHHHHcCCCCCCEEEEEEEecccccccccccc-----c-CCcccccccEEEEEecCCCCCeE---EEEEEEEccCh
Confidence 99999999999988 999999999994 3322321 1 47899999999999987642 11 11233333221
Q ss_pred --ecCCCcCccceEEecCceEEEe-CchhH----------H-HHHHHHHHHHHHhhccCCCCCCCce-EEE-EcCCChHH
Q 016111 247 --ILPGSDSDVAGQFREMGLTVHL-SKNVA----------T-VVSENIEKCLDEAFSPFGIKDWNSL-FWI-VQPGGPAI 310 (395)
Q Consensus 247 --~~p~~~~~~~~~~~~~g~~~~~-~~~v~----------~-~~~~~~~~~i~~~L~~~gl~~~~di-~~i-~hq~~~~~ 310 (395)
+++......... ......+.| ++++| + ++.+.++++++++|+++|+++ +|| +|+ +||+|..
T Consensus 194 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~~hq~~~~- 270 (357)
T 3s3l_A 194 EILARGDEPFAPHP-VEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAGTAI-EDIAHAVIPVSRRGT- 270 (357)
T ss_dssp GGGGTTTCCCCSSC-CSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEECCSCCCCS-
T ss_pred hhhcccCCCCCCCc-cCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHH-
Confidence 111110000000 000001122 23333 3 788899999999999999997 999 888 4999999
Q ss_pred HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 311 VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 311 ~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
++.++++||+|.||++.+ +.++||||++||+|++|++++++ |++++| |+|+|++||+|++|++++|||.+.
T Consensus 271 ~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~----g~l~~G---d~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 271 GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN----ALVQPG---DRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT----TCCCTT---CEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeeEEeccC
Confidence 999999999999998864 56899999999999999999998 899999 999999999999999999999998
Q ss_pred CC
Q 016111 391 PT 392 (395)
Q Consensus 391 ~~ 392 (395)
|.
T Consensus 342 p~ 343 (357)
T 3s3l_A 342 PA 343 (357)
T ss_dssp C-
T ss_pred CC
Confidence 85
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=383.54 Aligned_cols=323 Identities=18% Similarity=0.246 Sum_probs=265.1
Q ss_pred cccccCCCC-CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcC
Q 016111 7 GKNQQQGGG-LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICA 85 (395)
Q Consensus 7 ~~~~~~~~~-~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 85 (395)
|.|+..+++ +++|.|+|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++
T Consensus 1 ~~~~~~~~~~~~~I~gig~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~~---------- 58 (339)
T 1mzj_A 1 MPGLRVPERRFSRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDE---------- 58 (339)
T ss_dssp --CCCCCCCCEEEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTC----------
T ss_pred CCCcccCccCceEEEEEEEeCCCccccHHHHHHHh---CCC---------HHHHHHhcCceEEEEeCCCC----------
Confidence 345545543 5899999999999999999998753 222 27899999999999997655
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccc
Q 016111 86 YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGC 164 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C 164 (395)
...+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+.+||+++.+ +++++++|
T Consensus 59 ---------------~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aC 121 (339)
T 1mzj_A 59 ---------------TIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAAC 121 (339)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGG
T ss_pred ---------------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCcc--EEEccccc
Confidence 2889999999999999999999999999999988 77899999999999998643 89999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeee
Q 016111 165 YIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGA 244 (395)
Q Consensus 165 ~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~ 244 (395)
+|++.||.+|.++|++|..++|||+++|.++. +.++. ++.++++|||||+|+||++.+..++ . ...+.+.+
T Consensus 122 as~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~-~~~~~-----d~~~~~~~GdGA~A~vL~~~~~~~i-~--~~~~~~~g 192 (339)
T 1mzj_A 122 AGFCHALSIAADAVESGGSRHVLVVATERMTD-VIDLA-----DRSLSFLFGDGAGAAVVGPSDVPGI-G--PVVRGIDG 192 (339)
T ss_dssp GHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG-GSCSS-----CTTTTTTBCEEEEEEEEEEESSCCB-C--CCEEEECG
T ss_pred hHHHHHHHHHHHHHHCCCCCEEEEEEEccccc-ccCcc-----ccccceEeccCceEEEEEecCCCCe-E--EEEEEEcC
Confidence 99999999999999999999999999999886 33343 2335789999999999998654332 1 12222222
Q ss_pred e----eec----CCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH
Q 016111 245 Q----TIL----PGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI 314 (395)
Q Consensus 245 ~----~~~----p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i 314 (395)
. ... |...+.+. .....+.+ |+++++++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+
T Consensus 193 ~~~~~~~~~g~~p~~~~~~~----~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i 267 (339)
T 1mzj_A 193 TGLGSLHMSSSWDQYVEDPS----VGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVL 267 (339)
T ss_dssp GGGGGEEESCCHHHHTTCSS----SCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHH
T ss_pred CCCCeEEecCCCCCcccccc----cccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHH
Confidence 1 111 11100000 01122445 889999999999999999999999997 999 999999999999999
Q ss_pred HHHcCCCcc-chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 315 EAKLGLKQQ-KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 315 ~~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
.+.||++.+ +++. ++.+|||+++||+|++|++++++ +++++| |++++++||+|++|++++|||.+.|-
T Consensus 268 ~~~lg~~~~~~~~~---~~~~~Gn~~sAs~~~~L~~~~~~----g~~~~G---~~vll~~~G~G~t~~~~~l~~~~~p~ 336 (339)
T 1mzj_A 268 VDRLGVPEHVVVSR---DAEDTGNTSSASVALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPPS 336 (339)
T ss_dssp HHHHTCCTTSEECC---THHHHCBCTTHHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCCCC
T ss_pred HHHhCCCccceeee---hhhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeCCCCC
Confidence 999999999 8875 48999999999999999999998 889999 99999999999999999999988764
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=373.36 Aligned_cols=312 Identities=19% Similarity=0.240 Sum_probs=255.9
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++.+.+ ..++ +||.+++||++||++.+ +
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~---~~~~---------~~i~~~~Gi~~R~~~~~-~------------------- 51 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAEL---DTSD---------AWISSRTGVRQRHIAGD-L------------------- 51 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT---TCCH---------HHHHHHHCCCEEECCTT-C-------------------
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHh---CCCH---------HHHHHhhCceEEEecCC-C-------------------
Confidence 46899999999999999999998764 2222 78999999999999865 3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
...+|+.+|+++||+++|+ ++||.||++|+++ +..|+.+.+|+.+||+++.+ +++++++|+|++.||.+
T Consensus 52 ------~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~ 121 (331)
T 2x3e_A 52 ------GSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGAL--AFDLSAAATGFVYGLAS 121 (331)
T ss_dssp ------CHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTTSE--EEEEECGGGHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCc--EEEEcCcChHHHHHHHH
Confidence 2889999999999999999 8999999999988 66889999999999998643 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC--CC-CCCCCCceEEEeeee----e
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP--DT-TLSEKPLFQIVSGAQ----T 246 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~--~~-~~~~~~~~~~~~~~~----~ 246 (395)
|.++|++|..++|||+++|.++. +.++. ++.++++|||||+|+||++.+ .. ++ ....+.+.+. .
T Consensus 122 A~~~i~~g~~~~vLv~g~e~~s~-~~~~~-----d~~~~~~~GdGA~A~vL~~~~~a~~~~i---~~~~~~~dg~~~~~~ 192 (331)
T 2x3e_A 122 VGSLISAGLADSALLVGVDTFSH-TLDPA-----DRSTRALFGDGAGAVVLRAGDAEEEGAL---LAFDLGSDGHQFDLL 192 (331)
T ss_dssp HHHHHHTTSCSEEEEEEEECGGG-GSCTT-----CHHHHHHBCCEEEEEEEEEECTTSTTBE---EEEEEEECGGGTTSE
T ss_pred HHHHHHcCCCCEEEEEEeecccc-CCCcc-----ccccceeeccccEEEEEEecCCCCCCce---EEEEEEEcCCCCCeE
Confidence 99999999999999999999886 33342 334689999999999999865 21 11 0111222221 1
Q ss_pred ecCCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 247 ILPGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 247 ~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
..|.............+ .+.+ |+++++++.+.++++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.+|
T Consensus 193 ~~p~~~~~~p~~~~~~~-~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~ 270 (331)
T 2x3e_A 193 MTPAVSRAERSSGQASN-YFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQA-SDLHHLVPHQANTRILAAVADQLDLPVER 270 (331)
T ss_dssp EEECCCHHHHHHTCCCC-CCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHHTCCGGG
T ss_pred EecCCCCCCCCccCcCc-eEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHH
Confidence 11211000000000111 2344 889999999999999999999999997 999 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++. ++.+|||+++||+|++|++++++ +++++| |++++++||+|++|++++|||.+
T Consensus 271 ~~~---~~~~~Gnt~sAs~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~~l~~~~ 325 (331)
T 2x3e_A 271 VVS---NIAEVGNTVAASIPLALAHGLRQ----GILRDG---GNMVLTGFGAGLTWGSVALRWPK 325 (331)
T ss_dssp BCC---CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred Hhh---hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEeHHhhheeeEEEECC
Confidence 886 48999999999999999999998 889999 99999999999999999999964
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=368.83 Aligned_cols=309 Identities=23% Similarity=0.339 Sum_probs=257.0
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~-------------------- 49 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNE-------------------- 49 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTC--------------------
T ss_pred CcEEEEEEEeCCCceecHHHHHHHh---CCC---------HHHHHHHhCceEEEecCCCC--------------------
Confidence 5799999999999999999998753 222 27899999999999986655
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
...+|+.+|++++|+++|+++++||.|+++++++ +..|..+.+|+.+||+++.+ +++++.+|+|++.||..|
T Consensus 50 -----~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A 122 (317)
T 1hnj_A 50 -----TVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVA 122 (317)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe--EEeeCcccHHHHHHHHHH
Confidence 2889999999999999999999999999999988 77899999999999998643 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecCC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILPG 250 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 250 (395)
.++|++|..++|||+++|.++.. .+|. ++.++++|||||+|+||++.+..++ ....+.+.+. ...|.
T Consensus 123 ~~~i~~g~~~~vlv~g~e~~s~~-~~~~-----d~~~~~~~GdGA~A~vL~~~~~~~i---~~~~~~~~g~~~~~~~~~~ 193 (317)
T 1hnj_A 123 DQYVKSGAVKYALVVGSDVLART-CDPT-----DRGTIIIFGDGAGAAVLAASEEPGI---ISTHLHADGSYGELLTLPN 193 (317)
T ss_dssp HHHHHTTSCSEEEEEEEECHHHH-SCTT-----CHHHHTTBCCEEEEEEEEEESSCSE---EEEEEEECGGGGGGEECCC
T ss_pred HHHHHCCCCCEEEEEEechhccc-CCch-----hcccceeeccccEEEEEEecCCCce---eeEEEEEcCCCCCeEEECC
Confidence 99999999999999999998863 3343 3345799999999999998654322 0111222221 12232
Q ss_pred CcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH
Q 016111 251 SDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT 328 (395)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~ 328 (395)
. ..... ...+ .+.+ |+++++++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.+++..
T Consensus 194 ~-~~~~~--~~~~-~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~- 267 (317)
T 1hnj_A 194 A-DRVNP--ENSI-HLTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVV- 267 (317)
T ss_dssp C-CSSCT--TSCC-SCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC-
T ss_pred C-CCCCC--CCCc-eEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh-
Confidence 1 00000 0111 2334 788999999999999999999999997 999 9999999999999999999999999875
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 329 RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 329 ~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++.+|||+++||+|++|++++++ +++++| |+|++++||+|++|++++|||
T Consensus 268 --~~~~~Gn~~~As~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 268 --TLDRHGNTSAASVPCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp --CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred --hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 58999999999999999999998 889999 999999999999999999997
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=359.89 Aligned_cols=303 Identities=21% Similarity=0.329 Sum_probs=256.1
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++|+++.+++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~-------------------- 49 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFL---DTS---------DEWISKMTGIKERHWADDDQ-------------------- 49 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTS---SCC---------HHHHHHHHCCSEEECCCTTC--------------------
T ss_pred ceEEEEEEEECCCccccHHHHHHhc---CCC---------HHHHHHhhCceEEEecCCCC--------------------
Confidence 5899999999999999999998753 222 26899999999999987665
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+++.+||+++.+ +++++++|+|++.||..|
T Consensus 50 -----~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A 122 (313)
T 1zow_A 50 -----DTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA--SMDQLAACSGFMYSMITA 122 (313)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EEEECCcCHHHHHHHHHH
Confidence 2889999999999999999999999999999988 77899999999999998643 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eecC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~p 249 (395)
.++|++|..++|||+++|.++. +.+|. ++..+++|||||+|+||++.+.. ++ ....+.+.+. ...|
T Consensus 123 ~~~i~~g~~~~vLv~g~e~~s~-~~~~~-----d~~~~~~~gdGa~A~vl~~~~~~~~i---~~~~~~~~g~~~~~~~~~ 193 (313)
T 1zow_A 123 KQYVQSGDYHNILVVGADKLSK-ITDLT-----DRSTAVLFGDGAGAVIIGEVSEGRGI---ISYEMGSDGTGGKHLYLD 193 (313)
T ss_dssp HHHHHTTSCSCEEEEEEEEGGG-TCCTT-----CHHHHTTBCEEEEEEEEEECSTTCEE---EEEEEEECGGGGGGEEEC
T ss_pred HHHHHCCCCCEEEEEEEccccc-ccCcc-----cccceeeeccceEEEEEEecCCCCce---eEEEEEEcCCCcCeEEec
Confidence 9999999999999999999886 33443 23358999999999999987642 11 0111222211 1111
Q ss_pred CCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 250 GSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
.. +. .+.+ ++++++.+.+.+.++++++|+++|+++ +|| +|++||.+.++++.+.+.||++.++++.
T Consensus 194 ~~----------~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~ 261 (313)
T 1zow_A 194 KD----------TG-KLKMNGREVFKFAVRIMGDASTRVVEKANLTS-DDIDLFIPHQANIRIMESARERLGISKDKMSV 261 (313)
T ss_dssp TT----------TC-CEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBCC
T ss_pred CC----------CC-eeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHH
Confidence 10 01 1334 688899888999999999999999997 999 9999999999999999999999999875
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++.+|||+++|++|++|.+++++ +++++| |++++++||+|++|++++|||.
T Consensus 262 ---~~~~~Gh~~~as~~~~L~~~~~~----~~~~~g---~~vl~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 262 ---SVNKYGNTSAASIPLSIDQELKN----GKLKDD---DTIVLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp ---CHHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred ---hHhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 48999999999999999999998 889999 9999999999999999999995
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-48 Score=380.53 Aligned_cols=308 Identities=14% Similarity=0.141 Sum_probs=253.3
Q ss_pred cCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 11 QQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 11 ~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
+++.++++|.++|+|+|+++++|+++.+.+ +.++ +|+.+.+||++|+++.++++
T Consensus 2 ~~~~m~v~I~~~g~y~P~~~v~~~~l~~~~---g~~~---------~~~~~~~Gi~~r~~~~~~e~-------------- 55 (388)
T 3v4n_A 2 STGSMTIGIDKISFFVPPYYIDMTALAEAR---NVDP---------GKFHIGIGQDQMAVNPISQD-------------- 55 (388)
T ss_dssp CCSSCCEEEEEEEEECCSEEEEHHHHHHHT---TSCT---------HHHHTTTCCCEEECCCTTCC--------------
T ss_pred CCCceeEEEEEEEEECCCeEEcHHHHHHHh---CCCH---------HHHHHHhCceEEEECCCCCC--------------
Confidence 355678999999999999999999998874 2333 68888999999999987763
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGAT 169 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~ 169 (395)
+.+|+++|++++|+++| +++||+||++|+++ +..|+.+++|+++||+++.. ++++++++|+|++.
T Consensus 56 -----------~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~-~~~dv~~aC~gg~~ 121 (388)
T 3v4n_A 56 -----------IVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFA-RSFEIKEAXYGATA 121 (388)
T ss_dssp -----------HHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSC-EEEEEESGGGHHHH
T ss_pred -----------HHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCc-eEeehhhhhhHHHH
Confidence 89999999999999997 89999999999999 77999999999999998744 38999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEE--eeeeee
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIV--SGAQTI 247 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~--~~~~~~ 247 (395)
||.+|..+|++|+.++||||++|.++..+ ++. + ..+|||||+|+||++++. + +.+. +.+..
T Consensus 122 AL~~A~~~i~sg~~~~vLVvg~e~~s~~~-~~~-----~---~~lfGDGA~A~ll~~~~~--i-----l~~~~~~~~~~- 184 (388)
T 3v4n_A 122 GLQLAKNHVALHPDKKVLVVAADIAKYGL-NSG-----G---EPTQGAGAVAMLVSSEPR--I-----LALKEDNVMLT- 184 (388)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEEEEECCCT-TCT-----T---GGGCEEEEEEEEEEESCS--S-----EEECSCCEEEE-
T ss_pred HHHHHHHHHhcCCCCEEEEEEehhhcccC-CCC-----C---CCccccceeEEEeecCCC--c-----eEEeccccccc-
Confidence 99999999999999999999999999733 321 1 588999999999999763 1 2221 11110
Q ss_pred cCCCcCccc-eEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC--------hHHH----HH
Q 016111 248 LPGSDSDVA-GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG--------PAIV----NQ 313 (395)
Q Consensus 248 ~p~~~~~~~-~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~--------~~~~----~~ 313 (395)
.+.++ |.....++....|+.+++.+.+.++++++++|+++|+++ +|| +|+|||++ .+++ +.
T Consensus 185 ----~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~-~did~~v~Hqp~~k~~~ka~~ril~~~~~~ 259 (388)
T 3v4n_A 185 ----QDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDF-ADYDALAFHIPYTKMGKKALLAKISDQTEA 259 (388)
T ss_dssp ----CCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSSHHHHHHHHHHHSTTSCHH
T ss_pred ----hhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCH-HHCCEEEeCCCcchHHHHHHHHHHhcccHH
Confidence 01111 111011112223788999999999999999999999997 999 99999955 4555 67
Q ss_pred HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 314 IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 314 i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+.++|+++.+++.. ++++||||++||+|++|++++++. |++++| |+|+|++||+|+++..+.+++.+
T Consensus 260 ~~~~l~~~~e~~~~---~~~~~GN~~sASi~l~L~~~l~~~---g~~~~G---d~ill~s~GsG~~ae~~~~~v~~ 326 (388)
T 3v4n_A 260 EQERILARYEESII---YSRRVGNLYTGSLYLGLISLLENA---TTLTAG---NQIGLFSYGSGAVAEFFTGELVA 326 (388)
T ss_dssp HHHHHHHHHHHHTT---TGGGTCCCGGGHHHHHHHHHHHHC---SSCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred HHHHhCCCHHHHhh---HHHhcCchHHHHHHHHHHHHHHhc---CcCCCC---CEEEEEEecCcceeEEEEEEEcc
Confidence 78999999999775 599999999999999999999851 578999 99999999999999999999875
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=358.79 Aligned_cols=312 Identities=18% Similarity=0.273 Sum_probs=255.8
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQD 96 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~--------------------- 48 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDE--------------------- 48 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTC---------------------
T ss_pred cEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCceEEeecCCCC---------------------
Confidence 689999999999999999998753 222 27899999999999997655
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
...+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+.+||+ +.+ +++++++|+|++.||..|.
T Consensus 49 ----~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~--~~~v~~aCas~~~al~~A~ 121 (322)
T 1ub7_A 49 ----YTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAF--AYDLLAGCPGWIYALAQAH 121 (322)
T ss_dssp ----CHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCE--EEEEECSTTHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCE--EEeeCccchHHHHHHHHHH
Confidence 2889999999999999999999999999999988 6688999999999999 443 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eecCC
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TILPG 250 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~p~ 250 (395)
++|++|..+++||+++|.++. +.+|. ++..+++|||||+|+||++.+.. ++ ....+.+.+. .+.|.
T Consensus 122 ~~i~~g~~~~vlv~g~e~~s~-~~~~~-----d~~~~~~~GdGA~A~vL~~~~~~~~i---~~~~~~~~g~~~~~~~~~~ 192 (322)
T 1ub7_A 122 ALVEAGLAQKVLAVGAEALSK-IIDWN-----DRATAVLFGDGGGAAVVGKVREGYGF---RSFVLGADGTGAKELYHAC 192 (322)
T ss_dssp HHHHTTSCSEEEEEEEECGGG-TSCTT-----CHHHHTTBCCEEEEEEEECCCTTCEE---EEEEEEECGGGCTTEEEES
T ss_pred HHHHcCCCCEEEEEEechhcc-ccChh-----hcccceeeccccEEEEEEecCCCCce---eEEEEEEecCCCCeEEeCC
Confidence 999999999999999999886 33443 23458899999999999987542 11 0111122221 11121
Q ss_pred CcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH
Q 016111 251 SDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT 328 (395)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~ 328 (395)
............+ .+.+ |+++++++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.++++.
T Consensus 193 ~~~~~p~~~~~~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~- 269 (322)
T 1ub7_A 193 VAPRLPDGTSMKN-RLYMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAV- 269 (322)
T ss_dssp SCSBCTTSCBCCS-SCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC-
T ss_pred CCCCCCccccccc-eEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH-
Confidence 1000000000011 2344 789999999999999999999999997 999 9999999999999999999999999875
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 329 RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 329 ~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++.+|||+++|+++++|.+++++ +++++| +++++.+||.|++|++++|||++
T Consensus 270 --~~~~~Gh~~~As~~~~l~~~l~~----g~~~~g---~~~l~~~~G~G~~~~~~vl~~~~ 321 (322)
T 1ub7_A 270 --NVDRYGNTSTASIPLALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG 321 (322)
T ss_dssp --CHHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred --HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEChhheeEEEEEEeCC
Confidence 58999999999999999999998 889999 99999999999999999999965
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=361.12 Aligned_cols=313 Identities=19% Similarity=0.243 Sum_probs=256.3
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.++|+|+|+++++|+++.+.+ ..++ +|+.+++||++||++.+++
T Consensus 11 ~~~~I~g~g~~~P~~~~~~~~~~~~~---~~~~---------~~i~~~~gi~~r~~~~~~~------------------- 59 (335)
T 1u6e_A 11 RSVGLLSVGAYRPERVVTNDEICQHI---DSSD---------EWIYTRTGIKTRRFAADDE------------------- 59 (335)
T ss_dssp SCEEEEEEEEECCSEEEEHHHHTTSS---SCCH---------HHHHHHHCCSEEEECCTTC-------------------
T ss_pred CceEEEEEEEECCCceecHHHHHHHh---CCCH---------HHHHHhcCCceEeecCCCC-------------------
Confidence 35899999999999999999998753 2222 7899999999999987655
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+++.+ +++++++|+|++.||.+
T Consensus 60 ------~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aC~s~~~al~~ 131 (335)
T 1u6e_A 60 ------SAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL--GFDLSAGAAGFGYALGA 131 (335)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSE--EEEEECGGGHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EeeeccccHHHHHHHHH
Confidence 2899999999999999999999999999999988 78899999999999997543 78999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p 249 (395)
|..+|++|..++|||+++|.++. +.+|.+ +..+++|||||+|+||++.+..++ . ...+.+.+. ...+
T Consensus 132 A~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~gDGA~A~vl~~~~~~~i-~--~~~~~~~g~~~~~~~~~ 202 (335)
T 1u6e_A 132 AADMIRGGGAATMLVVGTEKLSP-TIDMYD-----RGNCFIFADGAAAVVVGETPFQGI-G--PTVAGSDGEQADAIRQD 202 (335)
T ss_dssp HHHHHHHTSCSSEEEEEEEECGG-GCCTTC-----TTTTTTBCEEEEEEEEEECSSCCB-C--CCEEEECGGGGGGEEES
T ss_pred HHHHHHcCCCCEEEEEEEccccc-ccCccc-----cccceEeccccEEEEEEecCCCCe-e--EEEEEEcCCcccceeec
Confidence 99999999999999999999987 334532 235789999999999998764322 0 111222111 1111
Q ss_pred CCcCccceEEecCc--eEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-c
Q 016111 250 GSDSDVAGQFREMG--LTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-K 324 (395)
Q Consensus 250 ~~~~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-~ 324 (395)
... ..+...+.+ ..+.+ |+.+++++.+.+.++++++|+++|+++ +|| +|++||.+..+++.+.+.||++.+ +
T Consensus 203 ~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~dId~~~~H~~~~~~~~~~~~~lg~~~~~~ 279 (335)
T 1u6e_A 203 IDW--ITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAV 279 (335)
T ss_dssp SCH--HHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCE
T ss_pred CCc--cCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCchhh
Confidence 110 000000000 12444 678888888899999999999999997 999 999999999999999999999998 7
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+.. ++++|||+++|++|++|++++++ +++++| +++|+++||+|++|++++|||.
T Consensus 280 ~~~---~~~~~Gnt~sAs~~~~L~~~~~~----~~~~~g---~~~l~~~~G~G~t~~~~vl~~~ 333 (335)
T 1u6e_A 280 VAN---DIEHTGNTSAASIPLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRMP 333 (335)
T ss_dssp ECC---THHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred hhh---hhhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEeC
Confidence 765 48999999999999999999987 889999 9999999999999999999994
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=350.18 Aligned_cols=303 Identities=20% Similarity=0.308 Sum_probs=253.1
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+ +
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~-~-------------------- 48 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIV---DTS---------DEWITTRTGIKERRIAKE-E-------------------- 48 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECSS-C--------------------
T ss_pred ceEEEEEEEECCCceEcHHHHHHHc---CCC---------HHHHHHHhCceeeeecCC-C--------------------
Confidence 5899999999999999999998653 222 278999999999999865 3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
...+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+.+||++..+ +++++++|++++.||..|
T Consensus 49 -----~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~~C~s~~~al~~A 121 (309)
T 2ebd_A 49 -----TITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVY--AFDISAACSGFIYALDIA 121 (309)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCce--EEecCccchHHHHHHHHH
Confidence 2889999999999999999999999999999988 77899999999999998743 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEE--EeeeeeecCCCc
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQI--VSGAQTILPGSD 252 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~--~~~~~~~~p~~~ 252 (395)
.++|++|..++|||+++|.++. +.+|. ++..+++|||||+|+||++.+... ..+.. .+.+. ..
T Consensus 122 ~~~i~~g~~~~vlv~g~e~~s~-~~~~~-----~~~~~~~~gdGaaA~vL~~~~~~~----~i~~~~~~~~g~-----~~ 186 (309)
T 2ebd_A 122 DSFIKSGKAKNVLVIGAEKLSE-AVDWE-----DRSTCVLFGDGAGAVVVTRSEDKS----DILATRMYAEGS-----LE 186 (309)
T ss_dssp HHHHHTTSCSEEEEEEEEEGGG-TCCTT-----CTTTTTTBCEEEEEEEEEECSSSC----EEEEEEEEECGG-----GG
T ss_pred HHHHHCCCCCEEEEEEeccccc-ccCcc-----chhhccccccccEEEEEEecCCCC----ceeEEEEEecCC-----cc
Confidence 9999999999999999999987 33443 223578999999999999876421 11111 11110 00
Q ss_pred CccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHH
Q 016111 253 SDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
+ .......+ .+.+ ++++++.+.+.+.++++++|+++|+++ +|| +|++|+.+.++++.+.+.||++.++++.
T Consensus 187 ~--~~~~p~~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~--- 259 (309)
T 2ebd_A 187 E--LLHADNCG-YIRMKGRELFKVAVRSMEEVCREVLEKAGVKP-EEVSLVIPHQANVRIINALAEKLNIPKEKVFV--- 259 (309)
T ss_dssp G--GEEECTTC-CEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCC---
T ss_pred c--eeEeCCCC-eEEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhh---
Confidence 0 01111111 1233 678888888899999999999999997 999 9999999999999999999999999875
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++.++||+++|+++++|.+++++ +++++| |++++++||+|++|++++|||
T Consensus 260 ~~~~~Gh~~~As~~~~L~~~~~~----g~~~~G---~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 260 NIQKYGNTSAASIPIALHEAIKE----GKVKRG---DLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp CHHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hHhhhcchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEC
Confidence 58999999999999999999998 889999 999999999999999999997
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=363.22 Aligned_cols=305 Identities=16% Similarity=0.183 Sum_probs=249.6
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.. ..++ +|+.+++||++|+++.+++.
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~---~~~~---------~~i~~~~Gi~~r~~~~~~e~------------------- 50 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR---QVDP---------NKFLIGIGQTEMAVSPVNQD------------------- 50 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT---TSCH---------HHHHTTTCCSEEEECCTTCC-------------------
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh---CCCH---------HHHhhhcCceEEEeCCCCCC-------------------
Confidence 5899999999999999999998764 2222 78999999999999977663
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
..+|+++|+++||++ +++++||.||++|+++ +..|+.+..|+.+||++... ++++++++|+|++.||..|
T Consensus 51 ------~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~-~~~~v~~aC~sg~~Al~~A 121 (396)
T 1xpm_A 51 ------IVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA-RCFEMKEACYAATPAIQLA 121 (396)
T ss_dssp ------HHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSC-EEEEEESTTTTHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCc-eEEEeccccHHHHHHHHHH
Confidence 899999999999998 6899999999999998 68899999999999998643 3899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe-eeeeecCCCcC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS-GAQTILPGSDS 253 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~ 253 (395)
.++|++|+.++||||++|..+. ..+ . ...++|||||+|+||++++. + +.+.. .+... .+
T Consensus 122 ~~~I~sg~~~~vLvvg~e~s~~-~~~--~------~~~~~~GdGA~A~vl~~~~~--i-----~~~~~~~g~~~----~d 181 (396)
T 1xpm_A 122 KDYLATRPNEKVLVIATDTARY-GLN--S------GGEPTQGAGAVAMVIAHNPS--I-----LALNEDAVAYT----ED 181 (396)
T ss_dssp HHHHTTCTTCEEEEEEEEEECC-CTT--C------SSGGGCEEEEEEEEEEESCS--S-----EEECSCCEEEE----CC
T ss_pred HHHHHcCCCCEEEEEeehhhcc-ccC--C------CCCcccccceEEEEeccCCc--e-----EEEEecccccc----ce
Confidence 9999999999999999998332 111 1 13789999999999998643 1 22211 11100 00
Q ss_pred ccc-eEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHc-----CCCccch
Q 016111 254 DVA-GQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKL-----GLKQQKL 325 (395)
Q Consensus 254 ~~~-~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~l-----gi~~e~~ 325 (395)
.++ |.....+ ...+ |+.+++++.+.+.++++++|+++|+++ +|| +|++||+|.++++.+.+++ +++.+++
T Consensus 182 ~~~~~~p~~~~-~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~-~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~ 259 (396)
T 1xpm_A 182 VYDFWRPTGHK-YPLVDGALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERL 259 (396)
T ss_dssp CCSEECBTTCS-SCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHH
T ss_pred EEEeeccCCCC-CeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHH
Confidence 000 1110111 1233 688899999999999999999999997 999 9999999999999999998 8998887
Q ss_pred hHH----HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 326 SAT----RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 326 ~~~----~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
..+ |..+++||||++||+|++|++++++ +++++| |+|++++||+|+++.++++++.+
T Consensus 260 ~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~----~~l~~G---d~ill~s~GsG~~~~~~~~~v~~ 320 (396)
T 1xpm_A 260 RSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVE 320 (396)
T ss_dssp HHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred HHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEECcchhheEEEEEEcc
Confidence 643 1123999999999999999999998 889999 99999999999999999999985
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=360.64 Aligned_cols=310 Identities=19% Similarity=0.195 Sum_probs=247.9
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++++.. +.++ +|+...+|+++|+++.+++
T Consensus 2 ~~v~I~~ig~y~P~~~v~~~~l~~~~---g~~~---------~~~~~g~G~~~~~~~~~~e------------------- 50 (450)
T 2f82_A 2 KNVGILAMDIYFPPTCVQQEALEAHD---GASK---------GKYTIGLGQDCLAFCTELE------------------- 50 (450)
T ss_dssp CSCEEEEEEEECCSEEEEHHHHHHHT---TCCT---------TTTTTTSCCCEEECCCTTC-------------------
T ss_pred CceEEEEEEEECCCeeccHHHHHHHh---CCCH---------HHhhhhhCceeeeeCCCCC-------------------
Confidence 46899999999999999999998874 2333 6777788999998876666
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCC--CCccccceecCccchhHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGL--NPSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl--~~~~~~~~~i~~~C~~~~~aL 171 (395)
++.+|+++|++++|+++|+++++||+||++|+++ +..|+.+.+|+..||+ +... ++++++++|+|++.||
T Consensus 51 ------~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~-~~~~v~~aC~gg~~AL 123 (450)
T 2f82_A 51 ------DVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDV-EGVDSTNACYGGTAAL 123 (450)
T ss_dssp ------CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCC-BCCEECSGGGHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCc-eEEEhhhhhHHHHHHH
Confidence 3899999999999999999999999999999998 7799999999999999 3333 3899999999999999
Q ss_pred HHHHHHHHcCCC--CeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 172 RMAKDFAENNPG--ARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 172 ~~A~~ll~~g~~--~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
.+|.++|++|.. ++||||++|.++. .+ + ....+|||||+|+||++++.. .+.....+... .
T Consensus 124 ~~A~~~I~sg~~~~~~vLVvg~e~~~~--~~-----~---~~~~~fGDGA~A~ll~~~~~~------~~~~~~~g~~~-~ 186 (450)
T 2f82_A 124 LNCVNWVESNSWDGRYGLVICTDSAVY--AE-----G---PARPTGGAAAIAMLIGPDAPI------VFESKLRGSHM-A 186 (450)
T ss_dssp HHHHHHHHSTTCCSCEEEEEEEEEECC--SS-----S---TTGGGCEEEEEEEEEESSCSE------EEEEEEEEEEE-C
T ss_pred HHHHHHHHcCCCcCCeEEEEEeeeccc--cC-----C---CCCcccccceEEEEeccCCce------EEEeccceeeh-h
Confidence 999999999986 9999999999862 21 1 147899999999999986531 12221111110 0
Q ss_pred CCcCccceEEecCce-EEEe-CchhHHHHHHHHHHHHHHhhc------cCCCCCCCce-EEEEcCCChHHHHHHHHHcC-
Q 016111 250 GSDSDVAGQFREMGL-TVHL-SKNVATVVSENIEKCLDEAFS------PFGIKDWNSL-FWIVQPGGPAIVNQIEAKLG- 319 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~------~~gl~~~~di-~~i~hq~~~~~~~~i~~~lg- 319 (395)
.. .++.....+. ...+ |+.+++.+.+.++++++++|+ ++|+++ +|| +|++||+|.++++.+.++|+
T Consensus 187 ~~---~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~-~did~~v~Hq~~~~i~~~~~~~L~~ 262 (450)
T 2f82_A 187 HV---YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSI-NDADYFVFHSPYNKLVQKSFARLLY 262 (450)
T ss_dssp CC---CSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCG-GGCSEEEECCSSHHHHHHHHHHHHH
T ss_pred hc---cceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCCh-hhcCEEEecCChHHHHHHHHHHhcc
Confidence 00 0111100010 1233 678888888899999999996 899997 999 99999999999999999998
Q ss_pred -----------------CCc---------------cchhH-------------HHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 320 -----------------LKQ---------------QKLSA-------------TRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 320 -----------------i~~---------------e~~~~-------------~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
+|+ ||++. ++.++++||||++||+|++|++++++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~- 341 (450)
T 2f82_A 263 NDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHN- 341 (450)
T ss_dssp HHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHh-
Confidence 554 44432 22457999999999999999999997
Q ss_pred hhcCC-ccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 355 AEEGK-VTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 355 ~~~g~-i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
++ +++| |+|++++||+|++|++++++|.+.
T Consensus 342 ---~~~~~~G---d~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 342 ---KHSDLAG---KRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp ---HGGGCTT---CEEEEEEEETTTEEEEEEEEECCC
T ss_pred ---CccCCCC---CEEEEEeecCCcccEEEEEEEeCC
Confidence 64 7889 999999999999999999999864
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=357.36 Aligned_cols=308 Identities=18% Similarity=0.122 Sum_probs=240.3
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++++..+ .++ +|+...+||++|+++.++++
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~g---~~~---------~~~~~~~Gi~~r~~~~~~e~------------------ 72 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYDG---VDA---------GKYTIGLGQAKMGFCTDRED------------------ 72 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHHT---CCT---------TCCCCCCCCCEEECCCTTCC------------------
T ss_pred CceEEEEEEEECCCeEecHHHHHHHhC---CCh---------hHhecccCceEEEeCCCCCC------------------
Confidence 368999999999999999999988752 232 67788999999999877663
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceecCccchhHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLT---KMLGLNPSVKRVMLYFQGCYIGATA 170 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~---~~Lgl~~~~~~~~~i~~~C~~~~~a 170 (395)
..+|+++|+++||+++|+++++||+||++|+++ +..|+.+..|+ ..||+++. ++++++++|+|++.|
T Consensus 73 -------~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~--~~~dv~~aC~gg~~A 143 (478)
T 2p8u_A 73 -------INSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDI--EGIDTTNACYGGTAA 143 (478)
T ss_dssp -------HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCC--BCCEEESGGGHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCc--eEEEEcchhHHHHHH
Confidence 899999999999999999999999999999999 78999999999 45555654 389999999999999
Q ss_pred HHHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeec
Q 016111 171 IRMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL 248 (395)
Q Consensus 171 L~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
|.+|..+|++|+ .++||||++|... +.+ ..+..+|||||+|+||++++...+ ...+ .+. ..
T Consensus 144 L~~A~~~i~sg~~~~~~aLVV~~Eia~--~~~--------~~~~~~fGdGA~A~Ll~~~~~~~l--~~~~----~gs-~~ 206 (478)
T 2p8u_A 144 VFNAVNWIESSSWDGRYALVVAGDIAV--YAT--------GNARPTGGVGAVALLIGPNAPLIF--ERGL----RGT-HM 206 (478)
T ss_dssp HHHHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCSEEE--CTTC----CEE-EE
T ss_pred HHHHHHHHHcCCccCCEEEEEEeeeec--ccC--------CCCCCcccceeEEEEEecCCCceE--eecc----cee-cc
Confidence 999999999998 8999999999642 321 114689999999999998653100 0000 010 00
Q ss_pred CCCcCccceEEecC-ce-EEEe-CchhHH---HHHHHHHHHHHHhhc--------cCCCCCCCce-EEEEcCCChHHHHH
Q 016111 249 PGSDSDVAGQFREM-GL-TVHL-SKNVAT---VVSENIEKCLDEAFS--------PFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 249 p~~~~~~~~~~~~~-g~-~~~~-~~~v~~---~~~~~~~~~i~~~L~--------~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
....+. +.++ +. ...+ |+.++. .+...+.+.+.+.++ ++|+++ +|+ +|++||+|.++++.
T Consensus 207 ~~~~d~----~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~-~did~~v~H~~~~ki~~~ 281 (478)
T 2p8u_A 207 QHAYDF----YKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTL-NDFGFMIFHSPYCKLVQK 281 (478)
T ss_dssp CCCCSE----ECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCG-GGCSEEEECCSSHHHHHH
T ss_pred cchhhe----eeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCCh-HHcCEEEecCCcHHHHHH
Confidence 111000 0111 10 1122 455555 334444456677776 789997 999 99999999999999
Q ss_pred HHHHcC------------------------CCc---------c-------------chhHHHHHHHhcCCCccchHHHHH
Q 016111 314 IEAKLG------------------------LKQ---------Q-------------KLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 314 i~~~lg------------------------i~~---------e-------------~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
+.++|+ +|. | |+..++.++++||||++||+|++|
T Consensus 282 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L 361 (478)
T 2p8u_A 282 SLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSL 361 (478)
T ss_dssp HHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHH
T ss_pred HHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHH
Confidence 999998 666 5 433344578999999999999999
Q ss_pred HHHHHhhhhcCC--ccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 348 DEIRRKSAEEGK--VTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 348 ~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
++++++ ++ +++| |+|++++||+|++|++++++|.+.
T Consensus 362 ~~ll~~----~~~~~~~G---drill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 362 ASVLAQ----YSPQQLAG---KRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp HHHHHH----SCHHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHHHHh----CCccCCCC---CEEEEEEEcchhhhEEEEEEEeCC
Confidence 999998 76 7899 999999999999999999999864
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=359.95 Aligned_cols=316 Identities=16% Similarity=0.146 Sum_probs=241.0
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+|+|.++|.|+|+++++|+|+++.. +.++ +||.+++||++||++.++|+
T Consensus 3 ~~~VgI~~~g~y~P~~~v~~~~l~~~~---~~~~---------~~i~~~~Gi~~r~~~~~~E~----------------- 53 (460)
T 2wya_A 3 PKDVGILALEVYFPAQYVDQTDLEKYN---NVEA---------GKYTVGLGQTRMGFCSVQED----------------- 53 (460)
T ss_dssp CSSCEEEEEEEECCSEEEEHHHHHHHT---TCCT---------TCCCCCCCCCEEECCCTTCC-----------------
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHh---CCCH---------HHHHHhhCcEEEEECCCCCC-----------------
Confidence 357999999999999999999998763 3443 78999999999999988874
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCc-cccceecCccchhHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPS-VKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~-~~~~~~i~~~C~~~~~aL 171 (395)
+++||++|+++||+++|++|++||+||++|+|+ +..|++++.|++.||+... ...++|++++|+|++.||
T Consensus 54 --------~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al 125 (460)
T 2wya_A 54 --------INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 125 (460)
T ss_dssp --------HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHH
Confidence 899999999999999999999999999999999 8999999999999975321 113799999999999999
Q ss_pred HHHHHHHHcCCCCeE--EEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe-eeeeec
Q 016111 172 RMAKDFAENNPGARV--LVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS-GAQTIL 248 (395)
Q Consensus 172 ~~A~~ll~~g~~~~v--Lvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (395)
.+|.++|++|..+++ +++++|... +.+ +.+..+|||||+|++++.++.... ......... ....++
T Consensus 126 ~~A~~~i~~g~~~~~lvvv~~s~~~~--~~d--------~~~~~~~GdGA~A~l~~~~~~~~~-~~~~~~~~~~~~~df~ 194 (460)
T 2wya_A 126 FNAANWMESSSWDGRYAMVVCGDIAV--YPS--------GNARPTGGAGAVAMLIGPKAPLAL-ERGLRGTHMENVYDFY 194 (460)
T ss_dssp HHHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCSEEE-CTTCCEEEECCCCSEE
T ss_pred HHHHHHHHhccccceEEEEEeccccc--ccc--------ccccccCcchHHhhhcccCCccee-ecccccccccchhhhh
Confidence 999999999986554 444444332 221 124678999999999998775321 000111111 111111
Q ss_pred -CCCcCccceEEecCc----eEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCC-
Q 016111 249 -PGSDSDVAGQFREMG----LTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGL- 320 (395)
Q Consensus 249 -p~~~~~~~~~~~~~g----~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi- 320 (395)
|...... ...+| ..+.+ ++++|+.+.+.+++.++++++++|++. +|+ +++|||+|.++++...++|++
T Consensus 195 ~p~~~s~~---~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~-~d~d~~v~Hqp~~r~~~k~~~rL~~~ 270 (460)
T 2wya_A 195 KPNLASEY---PIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTL-DDLQYMIFHTPFCKMVQKSLARLMFN 270 (460)
T ss_dssp CCCTTCSC---CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG-GGCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ccCCCCCC---cccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHhhhhhcccchHHHHHHHHHhcch
Confidence 2211110 00111 11223 678899999999999999999999997 999 999999999988777666543
Q ss_pred ------------------------------------------------CccchhHHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 321 ------------------------------------------------KQQKLSATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 321 ------------------------------------------------~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
+.++... ++++||||++||+|++|+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~---~~~~~GNt~sASiplaL~~ll~ 347 (460)
T 2wya_A 271 DFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLY---LSTHNGNMYTSSLYGCLASLLS 347 (460)
T ss_dssp HHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGH---HHHHHCCCGGGHHHHHHHHHHH
T ss_pred hhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhh---HHHhhCCcchhhHHHHHHHHHH
Confidence 2334443 5889999999999999999997
Q ss_pred hhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 353 KSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 353 ~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
... +++++| |+|+|++||+|++...+.+++.+
T Consensus 348 ~~~--~~~~~G---drIll~~fGSGl~s~~fs~~v~~ 379 (460)
T 2wya_A 348 HHS--AQELAG---SRIGAFSYGSGLAASFFSFRVSQ 379 (460)
T ss_dssp HSC--HHHHTT---CEEEEEEEETTTEEEEEEEEECS
T ss_pred hcc--ccCCCC---CEEEEEEecCCccceEEEEEEeC
Confidence 521 457789 99999999999999999888864
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-27 Score=222.48 Aligned_cols=246 Identities=13% Similarity=0.181 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..++|+.+|+++||+++|++++|||+||+++.+++. ..++.++++||++ +++++++|+|++.||.+|..+|++
T Consensus 54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~--~~A~~va~~Lgip-----afdV~~ACsg~~~AL~~Aa~~I~s 126 (347)
T 3lma_A 54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN--VTANYVARHLKIP-----FLCLFGACSTSMESIAISSALIDG 126 (347)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS--TTHHHHHHHHCCC-----EEEBCCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch--hHHHHHHHHhCCC-----EEEecChhHHHHHHHHHHHHHHhc
Confidence 588999999999999999999999999999999843 3789999999643 799999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc---cCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccce
Q 016111 181 NPGARVLVVCSDLSLGT---FRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAG 257 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~---~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 257 (395)
|.+++||||++|++|.. ++.|.+.......+..+++|||+|+||++.+.. +.+.-...+.. +++
T Consensus 127 G~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~I~~~t~Gkv--------vd~ 193 (347)
T 3lma_A 127 GFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IKITSATVGRV--------IDL 193 (347)
T ss_dssp TSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EEEEEEECCCC--------BCC
T ss_pred CCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cceeeeeeeee--------ecc
Confidence 99999999999999852 222222111123357788999999999975532 12222211111 111
Q ss_pred EEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE---EcCCChHHHHHHHHHcCCCccchhHHHHHHH
Q 016111 258 QFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI---VQPGGPAIVNQIEAKLGLKQQKLSATRHVLS 333 (395)
Q Consensus 258 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i---~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~ 333 (395)
...+ .+.||..+ .....+.|.+.|+++|+++ +|+ +++ +||.|.+|++.+.+++|+|.++.+... -+.
T Consensus 194 g~~d---~~nmg~am----aPaA~~ti~~~l~d~g~~~-~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dc-g~~ 264 (347)
T 3lma_A 194 GITD---SQDMGSAM----APAAADTIKQHLEDLGRTP-DDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDC-GLM 264 (347)
T ss_dssp SCCC---TTCHHHHH----HHHHHHHHHHHHHHHTCCG-GGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEG-GGT
T ss_pred CCCC---CCCccccc----hHHHHHHHHHHHHHhCCCH-HHcCEEecCChHHHHHHHHHHHHHHcCCChhHCcccc-ceE
Confidence 0110 01222222 2223367889999999998 999 999 789999999999999999998876521 245
Q ss_pred hcCCC--------ccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhh
Q 016111 334 EYGNM--------GGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVD 381 (395)
Q Consensus 334 ~~Gn~--------~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~ 381 (395)
-|+|. |++...++|.-.+-++ ++.|+ ..+||++++|+.+|-.
T Consensus 265 iy~~~~~~~~ggsg~~csa~v~~~~~~~~-----~~~g~-~~ril~~~tGalls~~ 314 (347)
T 3lma_A 265 IYTPDQQVFAGGSGCACSAVVTFAHIFKE-----IEAGR-LNRVLVVATGALLSPT 314 (347)
T ss_dssp SSCC---------CCCCHHHHHHHTHHHH-----HHTTS-CSEEEEEEEEECCCHH
T ss_pred EecCCCcccCCCCccccHHHHHHHHHHHH-----HhcCc-ccEEEEEecccccCcc
Confidence 55554 4477777777665543 33332 1689999999988743
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=189.74 Aligned_cols=226 Identities=19% Similarity=0.150 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|+++++||.|++++.++ +..|..+.+++..||++... ++++++.+|+|++.||.+|..+|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~-p~~~v~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV-PSYTVNKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS-CEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc-eEEEccccchHHHHHHHHHHHHHhC
Confidence 889999999999999999999999999999888 66788999999999997543 3899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c-------------------------------------------------------------
Q 016111 181 NPGARVLVVCSDLSLGT-F------------------------------------------------------------- 198 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~-~------------------------------------------------------------- 198 (395)
|.+++|||+++|.+|.. +
T Consensus 108 G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~ 187 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQN 187 (395)
T ss_dssp TSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999987740 0
Q ss_pred -----------------------------CCCCCCCc--------------------hhhhhhhhhccccEEEEEecCCC
Q 016111 199 -----------------------------RGPSDANL--------------------GCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 199 -----------------------------~~~~~~~~--------------------~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
.+|++.-+ -....+..+||||+|+||.+.+.
T Consensus 188 ~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~ 267 (395)
T 4e1l_A 188 KAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQK 267 (395)
T ss_dssp HHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHHH
Confidence 00000000 00012445689999999987542
Q ss_pred C-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC
Q 016111 230 T-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG 307 (395)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~ 307 (395)
. ..+..+...+.+.+.... . +... ......+++++|+++|+++ +|| ++.+|+.+
T Consensus 268 A~~~g~~~~a~i~g~~~~~~--~------------------p~~~---~~~~~~ai~~al~~agl~~-~dId~ve~~d~f 323 (395)
T 4e1l_A 268 ADELGIRPLAKIKSYASAGV--E------------------PEVM---GTGPIPATRKALKKAGLSI-NDIDLIEANEAF 323 (395)
T ss_dssp HHHHTCCCSEEEEEEEEEEC--C------------------GGGT---TCTHHHHHHHHHHHTTCCG-GGCSEEEECCSB
T ss_pred HHHCCCCeEEEEEEEEEccC--C------------------CCcc---hHHHHHHHHHHHHHcCCCH-HHcCEEEecChh
Confidence 1 000112334444332110 0 0000 0012367889999999997 999 99999999
Q ss_pred hHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 308 ~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
......+.+.||++.+++..+ .....+||+.+++-...+.+++..
T Consensus 324 a~~~~~~~~~lg~~~~~v~~~-gg~~~~Gh~~gasG~~~~~~~~~~ 368 (395)
T 4e1l_A 324 AAQALAVKNELQIDSSKLNVN-GGAIALGHPIGASGARILVTLIYE 368 (395)
T ss_dssp HHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCcC-CchhhcCCcHHHHHHHHHHHHHHH
Confidence 999999999999999887653 235679999988877777666554
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=187.88 Aligned_cols=257 Identities=15% Similarity=0.128 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCCC------------------C---------CCCHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVGV------------------D---------MPGADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~~------------------~---------~p~~a~~l~~~Lgl 150 (395)
..+|+.+|+++||+++|+++++|| .|+++++++. . .+..+.+|+..||+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 678999999999999999999999 9999887541 1 12478999999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccccc--------------------CCCCCCCchhhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTF--------------------RGPSDANLGCLA 210 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~--------------------~~~~~~~~~~~~ 210 (395)
+.. ++.++.+|+|++.||..|.++|++|.++.+||+++|.....+ ..|.+ ...
T Consensus 178 ~gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd----~~~ 250 (437)
T 2gqd_A 178 KGP---NGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQ----EGR 250 (437)
T ss_dssp CSS---EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTC----TTC
T ss_pred CCc---eEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCC----CCC
Confidence 873 788999999999999999999999999999999999742111 11222 123
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+|+||++.+.. ..+.....++.+.+....... +. .++ . ......++++++|+
T Consensus 251 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~---~p~-------~-----~~~~~~~ai~~Al~ 312 (437)
T 2gqd_A 251 DGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYH---IT---APA-------P-----EGEGGSRAMQAAMD 312 (437)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSC---SS---SCC-------G-----GGHHHHHHHHHHHH
T ss_pred CCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCC---CC---CCC-------C-----CHHHHHHHHHHHHH
Confidence 48899999999999875421 000112344444332111000 00 000 0 01235578999999
Q ss_pred cCCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc--
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT-- 361 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~-- 361 (395)
++|+++ +|| ++.+|+.+..+. +.+.+.+|.+.++++.+ .+-..+||+.+|+-.+.|..++.. .+++.+.
T Consensus 313 ~Agl~p-~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~~gAaG~~~li~~~l~-l~~~~ipp~ 389 (437)
T 2gqd_A 313 DAGIEP-KDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHLLGATGGIEAIFSALS-IKDSKVAPT 389 (437)
T ss_dssp HHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCB
T ss_pred HcCCCH-hhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCChhhhhHHHHHHHHHH-HhcCCCCCC
Confidence 999998 999 999999988763 34566677654555432 134668999999988877765542 1113221
Q ss_pred --------------------CCCCCceEEEEEEccchhhhheeeee
Q 016111 362 --------------------TGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 --------------------~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+. +..+++..+||.|.+-++++|+.
T Consensus 390 ~~~~~~~p~~~~~~v~~~~~~~-~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 390 IHAVTPDPECDLDIVPNEAQDL-DITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp TTCCSCCSSCCSBCCBSSCEEC-CCSEEEEEEECGGGEEEEEEEEC
T ss_pred CCCCCCCCCCCcccCCCccccC-CCCEEEEccCcCCCeeEEEEEEe
Confidence 00 11578889999999999999875
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-21 Score=188.94 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=177.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C---------------------------CCCCH-HH----H
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V---------------------------DMPGA-DY----Q 143 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~---------------------------~~p~~-a~----~ 143 (395)
....|+.+|+++||+++|+++++|| .|+++++++ + ..|+. +. +
T Consensus 72 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 151 (424)
T 1tqy_A 72 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 151 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhH
Confidence 4578999999999999999999999 688887754 2 11221 34 9
Q ss_pred HHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCC-----CCC--Cc
Q 016111 144 LTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGP-----SDA--NL 206 (395)
Q Consensus 144 l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~-----~~~--~~ 206 (395)
|+..||++.. +++++.+|+|++.||..|.++|++|.++.+||+++|..... ...+ +.. ..
T Consensus 152 ia~~lgl~gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpf 228 (424)
T 1tqy_A 152 VAWAVGAEGP---VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPF 228 (424)
T ss_dssp HHHHHTCCSC---EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTT
T ss_pred HHHhcCCCCc---eEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCC
Confidence 9999999863 78999999999999999999999999999999999984211 0011 000 00
Q ss_pred hhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
+....++++||||+|+||++.+. .+ .....++.+.+....... +. ...++ .....++
T Consensus 229 d~~~~G~v~geGaaavvL~~~~~A~~~g--~~i~a~I~g~~~~~dg~~---~~-~p~~~--------------g~~~~~a 288 (424)
T 1tqy_A 229 DGTRDGFVLAEGAAMFVLEDYDSALARG--ARIHAEISGYATRCNAYH---MT-GLKAD--------------GREMAET 288 (424)
T ss_dssp BTTCCCBCEECEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECSSC---SS-CCCTT--------------CHHHHHH
T ss_pred CCCCCceeeecceeEEEeccHHHHHhCC--CcEEEEEeeeEEcCCCCC---CC-CCCCC--------------HHHHHHH
Confidence 11234789999999999987542 11 112334443332111100 00 00011 1234578
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~ 357 (395)
++++|+++|+++ +|| ++.+|+.+..+ .+.+.+.++.+.++++.+ .+-..+||+.+|+-.+.|..++.. .++
T Consensus 289 i~~al~~agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~-s~k~~~GH~~~AaG~~~l~~~~l~-l~~ 365 (424)
T 1tqy_A 289 IRVALDESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA-LEH 365 (424)
T ss_dssp HHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHcCCCH-HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeee-ccccccccChhhhHHHHHHHHHHH-HHc
Confidence 999999999998 999 99999988775 344566677554455432 134668999999998888775432 111
Q ss_pred CCcc------------------------CCCCCceEEEEEEccchhhhheeeeec
Q 016111 358 GKVT------------------------TGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 358 g~i~------------------------~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+.+. +. ++++..+||.|.+.++++|+..
T Consensus 366 ~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~---~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 366 GVVPPTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp CEECCBTTCCSBBTTBCSCCCBSSCEECCC---SEEEEEEEETTTEEEEEEEECH
T ss_pred CCcCCCCCCCCCCCCCCcccCCCcccCCCC---CEEEEccccCCceEEEEEEccC
Confidence 3321 23 7899999999999999999874
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=189.69 Aligned_cols=226 Identities=13% Similarity=0.102 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|+++++||.|++++.++ +..|..+.+++..||++... ++++++.+|+|++.||.+|.++|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~-p~~~v~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV-TGYTIQRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC-EEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc-eEEEecCcchHHHHHHHHHHHHHhC
Confidence 889999999999999999999999999999888 56788999999999997433 3899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c-------------------------------------------------------------
Q 016111 181 NPGARVLVVCSDLSLGT-F------------------------------------------------------------- 198 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~-~------------------------------------------------------------- 198 (395)
|.+++|||+++|.++.. +
T Consensus 108 G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 187 (394)
T 3ss6_A 108 GVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTL 187 (394)
T ss_dssp TSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 99999999999987741 0
Q ss_pred ---------------------------CCCCCCCc--------------------hhhhhhhhhccccEEEEEecCCCC-
Q 016111 199 ---------------------------RGPSDANL--------------------GCLAGQALFGDGAAALIIGANPDT- 230 (395)
Q Consensus 199 ---------------------------~~~~~~~~--------------------~~~~~~~~fGDgAaA~vl~~~~~~- 230 (395)
.+|+..-+ -....++.+||||+|+||.+.+..
T Consensus 188 A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~ 267 (394)
T 3ss6_A 188 ALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAK 267 (394)
T ss_dssp HHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHH
T ss_pred HHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeEEEeccHHHHH
Confidence 00000000 001224457899999999875421
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
..+..+...+.+.+... . .+... ......+++++|+++|+++ +|| ++-+|+....
T Consensus 268 ~~g~~~~a~I~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~agl~~-~dId~ve~~d~fa~ 323 (394)
T 3ss6_A 268 EKGLQPLARIVGYSVAG---V-----------------DPKIM---GIGPAPAIRKGLEKVDWSL-EDADLLEINEAFAA 323 (394)
T ss_dssp HHTCCCSEEEEEEEEEE---C-----------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHH
T ss_pred HCCCCceEEEEEEEEec---C-----------------CCccc---hHHHHHHHHHHHHHcCCCH-HHcCEEEeCCchHH
Confidence 00011233444333211 0 00000 0123467889999999997 999 9999999988
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 310 ~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
....+.+.||++.+++..+ .....+||+.+|+-...+.+++..
T Consensus 324 ~~~~~~~~lg~~~~~v~~~-gg~~~~GH~~gasG~~~~~~~~~~ 366 (394)
T 3ss6_A 324 QYLAVEKELDLDREKVNVN-GSGVGLGHPIGCTGARITVSLIHE 366 (394)
T ss_dssp HHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCC-cchHhhCCcHHHHHHHHHHHHHHH
Confidence 8999999999998887653 235679999999977776666554
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=190.40 Aligned_cols=257 Identities=15% Similarity=0.140 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC---------------------------CCCCCHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG---------------------------VDMPGADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~---------------------------~~~p~~a~~l~~~Lg 149 (395)
....|+.+|+++||+++|+++++|| .|+++++++ +..+..+.+|+..||
T Consensus 87 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (427)
T 3ho9_A 87 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG 166 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhC
Confidence 4678999999999999999999999 688887641 123457889999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F----------RGPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~~~ 208 (395)
++.. .+.++.+|+|++.||..|.++|++|.++.+||+++|.++.. + ..|.+ .
T Consensus 167 l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd----~ 239 (427)
T 3ho9_A 167 LRGP---SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD----K 239 (427)
T ss_dssp CCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTB----T
T ss_pred CCCC---eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCcc----C
Confidence 9863 78899999999999999999999999999999999997521 0 01211 2
Q ss_pred hhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHH
Q 016111 209 LAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLD 285 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 285 (395)
...++++||||+|+||++.+. .+ .....++.+.+...... . +. ..... .....++++
T Consensus 240 ~~~G~v~geGAaavvL~~~~~A~~~g--~~i~a~i~g~~~~~dg~--~-~~-~p~~~--------------~~~~~~ai~ 299 (427)
T 3ho9_A 240 ERDGFVLGDGAGMLVLEEYEHAKKRG--AKIYAELVGFGMSSDAY--H-MT-SPPEN--------------GAGAALAMA 299 (427)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCS--B-TT-BCCTT--------------CHHHHHHHH
T ss_pred CCCCceeeeeEEEEEEccHHHHHHCC--CcEEEEEEEEeecCCCC--C-cC-CCCCC--------------HHHHHHHHH
Confidence 235789999999999997432 11 11234454433211000 0 00 00001 123456889
Q ss_pred HhhccCCCCCCCce-EEEEc-----CCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCC
Q 016111 286 EAFSPFGIKDWNSL-FWIVQ-----PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK 359 (395)
Q Consensus 286 ~~L~~~gl~~~~di-~~i~h-----q~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~ 359 (395)
++|+++|+++ +|| ++.+| +++......+.+.++.+.+++..+ .....+||+.+|+-.+.|..++... +++.
T Consensus 300 ~al~~Agl~~-~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~l-~~~~ 376 (427)
T 3ho9_A 300 NALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILAL-RDQA 376 (427)
T ss_dssp HHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTE
T ss_pred HHHHHcCCCH-HHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhccCHHHHHHHHHHHHHHHH-hcCC
Confidence 9999999997 999 99999 666667788888899877766543 2456799999999777776655431 1131
Q ss_pred ccC----------------------CCCCceEEEEEEccchhhhheeeee
Q 016111 360 VTT----------------------GEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 360 i~~----------------------G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+-| -.+..+++..+||.|.+.++++|+.
T Consensus 377 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 377 VPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp ECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 110 0012678899999999999999874
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-21 Score=186.99 Aligned_cols=252 Identities=16% Similarity=0.103 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|+++++||.|+++++++ +..|..+.+++..||++... ++++++.+|+|++.||.+|..+|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~-p~~~v~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEK-PAMTINIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-CEEEECCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCc-eEEEeccccHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999988 67889999999999997433 3899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-cC------------------------------------------------------------
Q 016111 181 NPGARVLVVCSDLSLGT-FR------------------------------------------------------------ 199 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~-~~------------------------------------------------------------ 199 (395)
|.+++|||+++|.+|.. +.
T Consensus 110 G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~ 189 (396)
T 4dd5_A 110 GDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQN 189 (396)
T ss_dssp TSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999988741 00
Q ss_pred -----------------------------CCCCCCc--------------------hhhhhhhhhccccEEEEEecCCCC
Q 016111 200 -----------------------------GPSDANL--------------------GCLAGQALFGDGAAALIIGANPDT 230 (395)
Q Consensus 200 -----------------------------~~~~~~~--------------------~~~~~~~~fGDgAaA~vl~~~~~~ 230 (395)
++++.-+ -....+..+||||+|+||.+.+..
T Consensus 190 ~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A 269 (396)
T 4dd5_A 190 KAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKA 269 (396)
T ss_dssp HHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHH
T ss_pred HHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHHH
Confidence 0000000 001123456899999999875421
Q ss_pred -CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCCh
Q 016111 231 -TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGP 308 (395)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~ 308 (395)
..+..+...+.+.+.... . +.. .......+++++|+++|+++ +|| +|-+|-...
T Consensus 270 ~~~g~~~~a~I~g~~~~~~--~------------------p~~---~~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~ 325 (396)
T 4dd5_A 270 EELGIEPLATIVSYGTAGV--D------------------PKI---MGYGPVPATKKALEAANMTI-EDIDLVEANEAFA 325 (396)
T ss_dssp HHHTCCCSEEEEEEEEEEC--C------------------GGG---GGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBH
T ss_pred HHCCCCceEEEEEEEEecC--C------------------CCc---ccHHHHHHHHHHHHHcCCCH-HHcCEEEecChHH
Confidence 000112335544332110 0 000 01123467889999999997 999 888999887
Q ss_pred HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 309 AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 309 ~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
.....+.+.||++.+++..+ .....+||+.+|+-...+.+++..... . .+ .+.|....+.|..-.+++|+
T Consensus 326 ~~~~~~~~~lg~~~~~~n~~-gg~~~~GH~~gasG~~~~~~~~~~L~~-~---~~---~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 326 AQSVAVIRDLNIDMNKVNVN-GGAIAIGHPIGCSGARILTTLLYEMKR-R---DA---KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp HHHHHHHHHHTCCTTSBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH-H---TC---SEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCccCCC-CchhhccCcHHHHHHHHHHHHHHHHHh-c---CC---CeEEEEEcccCCceeEEEEe
Confidence 77778889999988776542 245679999988877777766554111 1 22 34455444444444556665
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=184.98 Aligned_cols=261 Identities=12% Similarity=0.154 Sum_probs=179.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CC-------------------------CC-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VD-------------------------MP-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~-------------------------~p-~~a~~l~~~Lg 149 (395)
...+|+.+|+++||+++|+++++|| .|+++++++ +. .| ..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 4678999999999999999999999 477777654 20 23 46899999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCCC------C-chhhhhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPSDA------N-LGCLAGQ 212 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~~------~-~~~~~~~ 212 (395)
++. + ++.++.+|+|++.||..|.++|++|.++.+||+++|..... +..+... . .+....+
T Consensus 150 l~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg 226 (408)
T 1j3n_A 150 FTG-P--SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDG 226 (408)
T ss_dssp CCS-C--BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCC
T ss_pred CCC-c--eeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCc
Confidence 986 3 78999999999999999999999999999999999974211 1111000 0 0112247
Q ss_pred hhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 213 ALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 213 ~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
+++||||+|+||++.+. .+ .....++.+.+....... +. ...+. .....++++++|+
T Consensus 227 ~v~geGaaavvL~~~~~A~~~g--~~i~a~i~g~~~~~d~~~---~~-~p~~~--------------~~~~~~ai~~al~ 286 (408)
T 1j3n_A 227 FVMGEGAGVLVLEAYEHAKKRG--ARIYAELVGFGRSADAHH---IT-EPHPE--------------GKGAALAMARALK 286 (408)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCSC---SS-CCCTT--------------CHHHHHHHHHHHH
T ss_pred eEEeeeEEEEEEeeHHHHHhCC--CcEEEEEEEEEEcCCCCC---CC-CCCCC--------------HHHHHHHHHHHHH
Confidence 89999999999987542 11 112344443332111000 00 00000 1234578899999
Q ss_pred cCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCC
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG 363 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G 363 (395)
++|+++ +|| ++.+|+.+..+ .+.+.+.||.+.+++..+ .....+||+.+|+-++.|...+.. .+++.+.|-
T Consensus 287 ~Agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~~AsG~~~li~~~l~-l~~~~ipp~ 363 (408)
T 1j3n_A 287 DAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQA-LYHGVIPPT 363 (408)
T ss_dssp HHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCC
T ss_pred HcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEE-CchhhhccCHHHHHHHHHHHHHHH-HhcCCCCCC
Confidence 999997 999 99999998775 667778888766665542 135789999999988888765542 111221100
Q ss_pred --------------------CCCceEEEEEEccchhhhheeeee
Q 016111 364 --------------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 364 --------------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+..+++..+||.|.+-++++|+.
T Consensus 364 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 364 INLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp TTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 011578889999999999998874
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=180.51 Aligned_cols=263 Identities=14% Similarity=0.110 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecC-----------------C-CCCC---------CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLV-----------------G-VDMP---------GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t-----------------~-~~~p---------~~a~~l~~~Lg 149 (395)
....|+.+|+++||+++|+++++|| .|++++++ + ...| ..+.+|+..||
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 4678999999999999999999999 99998874 1 1222 24889999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc--------------ccCCCCCC--Cchhhhhhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG--------------TFRGPSDA--NLGCLAGQA 213 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~--------------~~~~~~~~--~~~~~~~~~ 213 (395)
++.. .++++.+|+|++.||..|.++|++|.++.|||+++|.+.. ...+|... ..+....++
T Consensus 153 l~gp---~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~ 229 (413)
T 3o04_A 153 AKGI---NSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGF 229 (413)
T ss_dssp CCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSB
T ss_pred CCCc---ceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCc
Confidence 9863 7889999999999999999999999999999999998321 00011100 011223578
Q ss_pred hhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC
Q 016111 214 LFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG 292 (395)
Q Consensus 214 ~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 292 (395)
++||||+|+||++.+.. ..+......+.+.+...... . +. ... .. .....++++++|+++|
T Consensus 230 ~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~--~-~~-~~~---------~~-----~~~~~~a~~~al~~ag 291 (413)
T 3o04_A 230 IIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAY--H-IT-APA---------PN-----GEGAARAMKMAIDDAG 291 (413)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCS--C-SS-SCC---------GG-----GHHHHHHHHHHHHHHT
T ss_pred eEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCC--C-CC-CCC---------CC-----HHHHHHHHHHHHHHcC
Confidence 99999999999975321 00011234444333211000 0 00 000 00 1234578899999999
Q ss_pred CCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc------
Q 016111 293 IKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV------ 360 (395)
Q Consensus 293 l~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i------ 360 (395)
+++ +|| ++.+|..+....+. +.+.++...+++..+ ..-..+||+.+|+-.+.|..++.. .+++.+
T Consensus 292 l~~-~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~~~~~~~~-l~~~~ipp~~~~ 368 (413)
T 3o04_A 292 LTP-DKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAIS-STKSMTGHTLGASGGIEAIFALLT-IRDNIIAPTIHL 368 (413)
T ss_dssp CCG-GGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCBTTC
T ss_pred CCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCcee-cccccccccHHHHHHHHHHHHHHH-HHhCCcCCCCCC
Confidence 997 999 99999887765443 344565444444332 145678999999987777665442 111221
Q ss_pred ----------------cCCCCCceEEEEEEccchhhhheeeeec
Q 016111 361 ----------------TTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 361 ----------------~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++. +..+++..+||.|.+-++++|+.-
T Consensus 369 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 369 KNQDEVCDLDYVPNEAREA-NVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp CSBCSSCCSCCCBSSCEEC-CCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCcccCCCcccCC-CCCEEEEeCccCCceEEEEEEEeC
Confidence 111 125778889999999999999864
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=178.45 Aligned_cols=258 Identities=16% Similarity=0.101 Sum_probs=175.9
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCCC------------------C---------CCCHHHHHHHHc
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVGV------------------D---------MPGADYQLTKML 148 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~~------------------~---------~p~~a~~l~~~L 148 (395)
....+|+.+|+++||+++|+++++|| .|+++++++. . ....+.+|+..|
T Consensus 75 d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 154 (416)
T 1e5m_A 75 DRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINL 154 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHh
Confidence 34678999999999999999999999 7888877541 1 124689999999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------cC----------CCCCCCch
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LGT----------FR----------GPSDANLG 207 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~~----------~~~~~~~~ 207 (395)
|++.. ++.++.+|+|++.||..|.++|++|.++.+||+++|.. +.. +. .|.+
T Consensus 155 gl~gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd---- 227 (416)
T 1e5m_A 155 GAKGP---NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFD---- 227 (416)
T ss_dssp TCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTB----
T ss_pred CCCCc---eeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCc----
Confidence 99863 78899999999999999999999999999999999973 321 00 1111
Q ss_pred hhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCL 284 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 284 (395)
....++++||||+|+||++.+. .+ .....++.+.+....... +.. ..+. .....+++
T Consensus 228 ~~~~G~v~geGaaavvL~~~~~A~~~g--~~i~a~I~g~~~~~d~~~---~~~-p~~~--------------~~~~~~ai 287 (416)
T 1e5m_A 228 KDRDGFVMGEGSGILILEELESALARG--AKIYGEMVGYAMTCDAYH---ITA-PVPD--------------GRGATRAI 287 (416)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCSC---SSS-CCTT--------------CHHHHHHH
T ss_pred cCCCCceeeeeEEEEEECcHHHHHHCC--CeEEEEEEEEEEccCCCC---CCC-CCCC--------------HHHHHHHH
Confidence 1134789999999999987532 11 112344544332111100 000 0001 12345789
Q ss_pred HHhhccCCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcC
Q 016111 285 DEAFSPFGIKDWNSL-FWIVQPGGPAIVN-----QIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358 (395)
Q Consensus 285 ~~~L~~~gl~~~~di-~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g 358 (395)
+++|+++|+++ +|| ++.+|+.+..+.+ .+.+.+|...++++.+ .+-..+||+.+|+-.+.|..++.. .+++
T Consensus 288 ~~al~~agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~~~ 364 (416)
T 1e5m_A 288 AWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVMA-IAED 364 (416)
T ss_dssp HHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHT
T ss_pred HHHHHHcCCCH-hHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeee-CcchhhcccHHHHHHHHHHHHHHH-HhcC
Confidence 99999999998 999 9999999877543 4556677655555432 134568999999887776665432 1112
Q ss_pred Ccc-----------------CC----CCCceEEEEEEccchhhhheeeee
Q 016111 359 KVT-----------------TG----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 359 ~i~-----------------~G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+. +. .+..+++..+||.|.+-++++|+.
T Consensus 365 ~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~ 414 (416)
T 1e5m_A 365 KVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 414 (416)
T ss_dssp EECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEe
Confidence 210 00 012577888999999988888874
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=179.33 Aligned_cols=261 Identities=15% Similarity=0.108 Sum_probs=175.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCC-CCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSK-SQIT----HLIFCSLVG-V-------------------------DMP-GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~-~~Id----~vi~~s~t~-~-------------------------~~p-~~a~~l~~~L 148 (395)
....|+.+|+++||+++|+++ ++|| .|+++++++ + ..+ ..+.+|+..|
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 467899999999999999998 8887 588877654 1 123 4789999999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------cC---CCCCC--Cchhhhhh
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LGT----------FR---GPSDA--NLGCLAGQ 212 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~~---~~~~~--~~~~~~~~ 212 (395)
|++. + ++.++.+|+|++.||..|.++|++|.++.+||+++|.. +.. +. +|... ..+....+
T Consensus 176 gl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G 252 (438)
T 2iwz_A 176 KLKG-P--NHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDG 252 (438)
T ss_dssp TCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCS
T ss_pred CCCC-c--eeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCC
Confidence 9987 3 78999999999999999999999999999999999973 210 00 01100 01112347
Q ss_pred hhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 213 ALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 213 ~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
+++||||+|+||++.+. .+ .....++.+.+....... +. .++ . ......++++++|+
T Consensus 253 ~~~geGAaavvL~~~~~A~~~g--~~i~a~I~g~~~~~d~~~---~t---~p~-------~-----~~~~~~~ai~~Al~ 312 (438)
T 2iwz_A 253 FVMGEGAAVLVLEEYEHAVQRR--ARIYAEVLGYGLSGDAGH---IT---APD-------P-----EGEGALRCMAAALK 312 (438)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCSC---SS---SCC-------T-----TCHHHHHHHHHHHH
T ss_pred EEeeceEEEEEeccHHHHHhCC--CceEEEEecceecCCCCC---CC---CCC-------C-----CHHHHHHHHHHHHH
Confidence 89999999999987532 11 112344444332111100 00 000 0 01235578999999
Q ss_pred cCCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc--
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT-- 361 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~-- 361 (395)
++|+++ +|| ++.+|+.+..+. +.+.+.+|...++++.+ .+-..+||+.+|+-.+.|..++.. .+++.+.
T Consensus 313 ~Agl~p-~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~~~GH~~gAaG~~~li~~~l~-l~~~~ipp~ 389 (438)
T 2iwz_A 313 DAGVQP-EEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKGATGHLLGAAGAVEAAFTTLA-CYYQKLPPT 389 (438)
T ss_dssp HHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCB
T ss_pred HcCCCH-HHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCccee-cchhhhcCCHHHHHHHHHHHHHHH-HhcCccCCC
Confidence 999998 999 999999987753 34556666554455432 135677999999988887665442 1112211
Q ss_pred ----------------------CCCCCceEEEEEEccchhhhheeeee
Q 016111 362 ----------------------TGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ----------------------~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+..+..+++..+||.|.+-++++|+.
T Consensus 390 ~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 390 LNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp TTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 10012567788999999988888864
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-19 Score=176.31 Aligned_cols=257 Identities=15% Similarity=0.113 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C---------------------C----CC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V---------------------D----MP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~---------------------~----~p-~~a~~l~~~Lgl 150 (395)
...|+.+|+++||+++|+++++|| .|+++++++ + . .+ ..+.+|+..||+
T Consensus 93 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 172 (430)
T 1ox0_A 93 YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA 172 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC
Confidence 568999999999999999999999 688887654 1 1 12 368899999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCC----CCCC--Cchhhhhhhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRG----PSDA--NLGCLAGQAL 214 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~----~~~~--~~~~~~~~~~ 214 (395)
+.. +++++.+|+|++.||..|.++|++|.++.+||+++|..... ... |... ..+....+++
T Consensus 173 ~Gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~ 249 (430)
T 1ox0_A 173 NGV---CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFV 249 (430)
T ss_dssp CSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBC
T ss_pred CCc---eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCcc
Confidence 963 78999999999999999999999999999999999985321 111 1100 0112235889
Q ss_pred hccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccC
Q 016111 215 FGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF 291 (395)
Q Consensus 215 fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~ 291 (395)
+||||+|+||++.+. .+ .....++.+.+....... +. .++ . ......++++++|+++
T Consensus 250 ~geGAaavvL~~~~~A~~~g--~~i~a~I~g~~~~~dg~~---~~---~p~-------~-----~~~~~~~ai~~al~~A 309 (430)
T 1ox0_A 250 MGEGSGMLVLESLEHAEKRG--ATILAEVVGYGNTCDAYH---MT---SPH-------P-----EGQGAIKAIKLALEEA 309 (430)
T ss_dssp BCCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCSC---SS---SCC-------T-----TCHHHHHHHHHHHHHH
T ss_pred ccceEEEEEECcHHHHHhCC--CceEEEEEEEEEecCCCC---CC---CCC-------C-----ChHHHHHHHHHHHHHh
Confidence 999999999987542 11 112344443322111000 00 000 0 0123457889999999
Q ss_pred CCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc----
Q 016111 292 GIKDWNSL-FWIVQPGGPAIVN-----QIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT---- 361 (395)
Q Consensus 292 gl~~~~di-~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~---- 361 (395)
|+++ +|| ++.+|+.+....+ .+.+.+|- +++.+ .+-..+||+.+|+-.+.+..++.. .+++.+.
T Consensus 310 gl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~~~~ipp~~~ 383 (430)
T 1ox0_A 310 EISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPVS-STKSFTGHLLGAAGAVEAIVTIEA-MRHNFVPMTAG 383 (430)
T ss_dssp TCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCBSS
T ss_pred CcCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhCC---Cceec-ccccccccchhhHHHHHHHHHHHH-HhcCccCCCCC
Confidence 9997 999 9999999877654 34455653 22211 024558999999887777665442 1112210
Q ss_pred ------------------CCCCCceEEEEEEccchhhhheeeeec
Q 016111 362 ------------------TGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 362 ------------------~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+. +..+++..+||.|.+-++++|+..
T Consensus 384 ~~~~~p~~~~~~v~~~~~~~-~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 384 TSEVSDYIEANVVYGQGLEK-EIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp CCSBCTTCCSEECBSSCEEC-CCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCcccCCCCCcCC-CCCEEEEeCccCCCceEEEEEeec
Confidence 00 125788899999999889998753
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=8.1e-19 Score=174.12 Aligned_cols=330 Identities=14% Similarity=0.071 Sum_probs=195.0
Q ss_pred cccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCC
Q 016111 7 GKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAY 86 (395)
Q Consensus 7 ~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 86 (395)
|++......++.|+|+|...|... +.+++.+.+.. ..+...++. .| ...++..+ +...-... ++ ..+
T Consensus 1 ~~~~~~~~~~v~I~G~g~~~p~g~-~~~~~w~~l~~--g~~~i~~~~---~~--~~~~~~~~-~~~~v~~f--d~--~~~ 67 (415)
T 1tqy_B 1 MDYKDDDDKSVLITGVGVVAPNGL-GLAPYWSAVLD--GRHGLGPVT---RF--DVSRYPAT-LAGQIDDF--HA--PDH 67 (415)
T ss_dssp ---------CEEEEEEEEEETTEE-SHHHHHHHHHT--TCCCEEECT---TT--TGGGSSCC-EEECCCSC--CH--HHH
T ss_pred CCcCCCCCCCEEEEeeEEECCCCC-CHHHHHHHHHc--CCCcEEECC---cc--cccCCCcc-eEEEeCCC--Cc--hhc
Confidence 567777888999999999999874 66777666421 111000000 00 00001111 11000000 00 000
Q ss_pred CCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C--------------------------
Q 016111 87 DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------- 135 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------- 135 (395)
..+... ........|+.+|+++||+++|+++++|| .|+++++++ +
T Consensus 68 ~~~~~~----~~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (415)
T 1tqy_B 68 IPGRLL----PQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAW 143 (415)
T ss_dssp SCTTTG----GGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHS
T ss_pred CCHHHH----HhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcc
Confidence 000000 01113578999999999999999999999 899888744 2
Q ss_pred CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------c------
Q 016111 136 DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LGT----------F------ 198 (395)
Q Consensus 136 ~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~------ 198 (395)
..+..+.+|+..||++.. ++.++.+|+|++.||..|.++|++| ++.+||+++|.. +.. +
T Consensus 144 ~~~~~a~~ia~~lgl~gp---~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~ 219 (415)
T 1tqy_B 144 FYAVNTGQISIRHGMRGP---SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDP 219 (415)
T ss_dssp STTHHHHHHHHHHTCCSS---CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCG
T ss_pred cchHHHHHHHHHhCCCCc---eEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCC
Confidence 235678999999999863 7899999999999999999999999 999999999983 210 1
Q ss_pred ---CCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCC-CCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhH
Q 016111 199 ---RGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSE-KPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVA 273 (395)
Q Consensus 199 ---~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~ 273 (395)
..|.+ ....++++||||+|+||++.+.. ..+. ....++.+.+... +|..+. .+..
T Consensus 220 ~~~~~pfd----~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~--------------dg~~~~-~p~~- 279 (415)
T 1tqy_B 220 DRAYLPFD----ERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTF--------------DPAPGS-GRPA- 279 (415)
T ss_dssp GGSCCTTS----TTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEE--------------CCCTTC-CCCC-
T ss_pred CCCcCCCC----CCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEcc--------------CCCCCC-CCCH-
Confidence 01211 12347899999999999875421 0001 1234444433211 110000 0110
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHH
Q 016111 274 TVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 274 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
...++++++|+++|+++ +|| ++..|..+..+.+. +.+.++-.. ++.+ ..-..+||+.+|+-.+.+
T Consensus 280 -----~~~~ai~~al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~--~~v~-s~K~~~GH~~gAaG~~~~ 350 (415)
T 1tqy_B 280 -----GLERAIRLALNDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGREG--VPVT-VPKTTTGRLYSGGGPLDV 350 (415)
T ss_dssp -----SHHHHHHHHHHHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTTC--SEEE-CGGGGTCBCGGGHHHHHH
T ss_pred -----HHHHHHHHHHHHcCCCH-hHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCC--ceEe-ccchhhccChHHHHHHHH
Confidence 24468899999999997 999 99999888764433 344455321 2111 023458999999987777
Q ss_pred HHHHHhhhhcCCc----------------------cCCCCCceEEEEEEccchhhhheeeeec
Q 016111 348 DEIRRKSAEEGKV----------------------TTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 348 ~~~~~~~~~~g~i----------------------~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
..++... +++.+ ++. +..+++..+||.|.+-++++|+..
T Consensus 351 ~~~~~~l-~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~-~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 351 VTALMSL-REGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp HHHHHHH-HHTSBCCBCSCCCCCGGGCCEECBSSCBCC-CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHH-hcCCcCCCCCCCCCCCCCCccccCCCCccC-CCCEEEEecCcCCCeEEEEEEecC
Confidence 7655421 11221 010 126789999999999999998764
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-20 Score=182.72 Aligned_cols=267 Identities=10% Similarity=0.017 Sum_probs=163.6
Q ss_pred CCCcccccccHHHHHHhhccCCchhHHHHHHHHHHH--hcCcceee-eeecchhhhcCCCCcCCCCCChhHHHHHHHHhH
Q 016111 26 NPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICE--KSNVKKRY-FHVTEDILKKNPNICAYDGSSLDSRQDILVREV 102 (395)
Q Consensus 26 lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (395)
=|+++++|+++.+.......++ .+|.. ++++..|+ .+.+++ +.
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~---------v~Ivg~~rt~~g~~~~~~~~~~-------------------------~~ 55 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAAD---------VVVVHGRRTAICRAGRGGFKDT-------------------------TP 55 (418)
T ss_dssp -----------------CCTTC---------EEEEEEEECCCEETTTSTTTTC-------------------------CH
T ss_pred CCCccccHHHHHHHhhhccCCC---------eEEEeeeecCceecCCCCCCCC-------------------------CH
Confidence 4999999999987642100011 23433 56666542 232333 38
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
.+|+.+|+++||+++|+++++||.|+++++++ +..|..+..++..||++... ++++++.+|+|++.||..|.++|++|
T Consensus 56 ~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~-p~~~v~~aCss~~~Al~~A~~~I~~G 134 (418)
T 2iik_A 56 DELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV-PLSTVNRQCSSGLQAVASIAGGIRNG 134 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS-CEEEEECGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc-eEEEeCCCCHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999998887 55567788889999995322 37999999999999999999999999
Q ss_pred CCCeEEEEEeeccccc--------------------------------------------------------------cC
Q 016111 182 PGARVLVVCSDLSLGT--------------------------------------------------------------FR 199 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~--------------------------------------------------------------~~ 199 (395)
.++.|||+++|.++.. |.
T Consensus 135 ~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~ 214 (418)
T 2iik_A 135 SYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQ 214 (418)
T ss_dssp SCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccc
Confidence 9999999999987641 00
Q ss_pred CC----------------------CCCCc--------------hh------hhhhhhhccccEEEEEecCCCC-CCCCCC
Q 016111 200 GP----------------------SDANL--------------GC------LAGQALFGDGAAALIIGANPDT-TLSEKP 236 (395)
Q Consensus 200 ~~----------------------~~~~~--------------~~------~~~~~~fGDgAaA~vl~~~~~~-~~~~~~ 236 (395)
++ ++..+ .+ ...++.++|||+|+||.+.+.. ..+..+
T Consensus 215 ~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~ 294 (418)
T 2iik_A 215 AEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPI 294 (418)
T ss_dssp TTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCC
T ss_pred cceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCc
Confidence 00 00000 00 0246678999999999875421 000112
Q ss_pred ceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHH
Q 016111 237 LFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIE 315 (395)
Q Consensus 237 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~ 315 (395)
...+.+.+... . .+.... .....+++++|+++|+++ +|| +|=.|-..........
T Consensus 295 ~a~i~g~~~~~---~-----------------~p~~~~---~~~~~a~~~al~~Agl~~-~dId~vE~h~af~~~~~~~~ 350 (418)
T 2iik_A 295 LGVLRSYAVVG---V-----------------PPDIMG---IGPAYAIPVALQKAGLTV-SDVDIFEINEAFASQAAYCV 350 (418)
T ss_dssp CEEEEEEEEEE---C-----------------CGGGGG---GHHHHHHHHHHHHHTCCG-GGEEEEEECCSBHHHHHHHH
T ss_pred eEEEEEEEecc---C-----------------Cchhcc---hhHHHHHHHHHHHcCCCH-HHCCeeeeeccchHHHHHHH
Confidence 23443322110 0 011110 112357889999999997 999 8889976554444446
Q ss_pred HHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 316 AKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 316 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
+.||++.+++..+ --+..+||..+++-...+.+++.
T Consensus 351 ~~lg~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~~~ 386 (418)
T 2iik_A 351 EKLRLPPEKVNPL-GGAVALGHPLGCTGARQVITLLN 386 (418)
T ss_dssp HHHTCCGGGBCTT-CCHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHcCCCccccCCC-CCeeeecCChhhhHHHHHHHHHH
Confidence 7899987765432 01256999988885555555544
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-19 Score=176.16 Aligned_cols=263 Identities=13% Similarity=0.099 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC-cC----EEEEEecC--------------------------C-CCCCCHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQ-IT----HLIFCSLV--------------------------G-VDMPGADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~-Id----~vi~~s~t--------------------------~-~~~p~~a~~l~~~L 148 (395)
....|+.+|+++||+++|+++++ || .|+++++. + +..+..+.+|+..|
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 46789999999999999999998 87 67777652 1 23345789999999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCC--------CCCchhhh
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPS--------DANLGCLA 210 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~--------~~~~~~~~ 210 (395)
|++.. .+.++.+|+|++.||..|.++|++|.++.+||+++|..... ..... -...+...
T Consensus 166 gl~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 242 (428)
T 3kzu_A 166 KLRGP---NHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDR 242 (428)
T ss_dssp TCCSC---EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTC
T ss_pred CCCCc---eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCC
Confidence 99863 68899999999999999999999999999999999983210 00000 00011223
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+|+||++.+.. ..+......+.+.+...... . +. ..... .....++++++|+
T Consensus 243 ~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~--~-~~-~p~~~--------------~~~~~~ai~~al~ 304 (428)
T 3kzu_A 243 DGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAF--H-IT-APTES--------------GEGAQRCMVAALK 304 (428)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCS--C-SS-SCCTT--------------CHHHHHHHHHHHH
T ss_pred CceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCC--C-CC-CCCCC--------------HHHHHHHHHHHHH
Confidence 57899999999999875321 00011234444332211000 0 00 00000 1234578899999
Q ss_pred cCCCCCCCce-EEEEc----CCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC--
Q 016111 290 PFGIKDWNSL-FWIVQ----PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT-- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~h----q~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~-- 362 (395)
++|+++ +|| ++.+| +++...++.+.+.++.+.+++..+ .....+||+.+|+-.+.|...+.. .+++.+.|
T Consensus 305 ~Agl~~-~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~-l~~~~ipp~~ 381 (428)
T 3kzu_A 305 RAGIVP-DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMS-STKSSIGHLLGAAGAAEAVFSTLA-IRDNIAPATL 381 (428)
T ss_dssp HHTCCG-GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCBT
T ss_pred HcCCCH-HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeC-CchhhhCCCchhhHHHHHHHHHHH-hccCccCCCC
Confidence 999997 999 99999 888888888999999887776553 246789999999888877765542 11121110
Q ss_pred ---------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 ---------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 ---------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
. .+.++++..+||.|.+-++++|+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 382 NLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp TCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence 0 012578888999999999998875
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-19 Score=176.46 Aligned_cols=254 Identities=11% Similarity=0.063 Sum_probs=168.4
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|++ +|++++|||.||+++.++ . ..|..+.+++..||++... ++++++.+|+|++.||..|.++
T Consensus 31 ~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~-pa~~v~~~Css~~~Al~~A~~~ 109 (407)
T 3svk_A 31 KPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETT-GGVQLNRFCASGLEAVNTAAQK 109 (407)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTC-EEEEEC---CBSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCC-ceEEecCcChhHHHHHHHHHHH
Confidence 3789999999999999 999999999999999887 3 3678999999999995443 3899999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-c----------------------------------------------------------
Q 016111 178 AENNPGARVLVVCSDLSLGT-F---------------------------------------------------------- 198 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~-~---------------------------------------------------------- 198 (395)
|++|.++.|||+++|.+|.. +
T Consensus 110 I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g 189 (407)
T 3svk_A 110 VRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGG 189 (407)
T ss_dssp HHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999987741 0
Q ss_pred -----------------CCCCCCCc-----h------------------------------------hhhhhhhhccccE
Q 016111 199 -----------------RGPSDANL-----G------------------------------------CLAGQALFGDGAA 220 (395)
Q Consensus 199 -----------------~~~~~~~~-----~------------------------------------~~~~~~~fGDgAa 220 (395)
.+|+..-+ + ....+..++|||+
T Consensus 190 ~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAa 269 (407)
T 3svk_A 190 YFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAA 269 (407)
T ss_dssp TTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEE
T ss_pred CcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCcee
Confidence 00110000 0 0122345889999
Q ss_pred EEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce
Q 016111 221 ALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL 299 (395)
Q Consensus 221 A~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di 299 (395)
|+||.+.+.. ..+..+..++.+.+... .+ .. .++. ....+++++|+++|+++ +||
T Consensus 270 avvL~s~~~A~~~g~~~~a~i~g~~~~~----~~---p~--------~~~~--------~~~~a~~~al~~Agl~~-~dI 325 (407)
T 3svk_A 270 LVLVGSEKAGKSQGLTPRARIVATATSG----SD---PV--------IMLT--------GPTPATRKVLDRAGLTI-DDI 325 (407)
T ss_dssp EEEEECHHHHHHTTCCCCEEEEEEEEC---------------------CCC--------THHHHHHHHHHHHTCCG-GGC
T ss_pred EEEEeeHHHHHHcCCCCcEEEEEEEEec----cC---Cc--------cccH--------HHHHHHHHHHHHcCCCH-HHC
Confidence 9999875421 00012234444333210 00 00 0000 11357889999999997 999
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccch
Q 016111 300 -FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378 (395)
Q Consensus 300 -~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 378 (395)
++-+|+.+......+.+.||++.+++..+ .....+||...++-...+.+++.+... +.+ .+.|....+.|.
T Consensus 326 d~~e~hdaf~~~~l~~~~~lg~~~~~vn~~-Gg~~~~GHp~gasG~~~~~~~~~~L~~----~~~---~~gl~~~c~ggG 397 (407)
T 3svk_A 326 DLFELNEAFASVVLKFQKDLNIPDEKLNVN-GGAIAMGHPLGATGAMITGTMVDELER----RNA---RRALITLCIGGG 397 (407)
T ss_dssp SEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCGGGHHHHHHHHHHHHHHH----HTC---CEEEEEEECSSS
T ss_pred CEEEEeChhHHHHHHHHHHhCCCCCCCCCC-CcHhheeCcHHHHHHHHHHHHHHHHHh----cCC---CEEEEEeeccCc
Confidence 99999999888778889999999887543 234568999988877666666554111 122 455555555555
Q ss_pred hhhheeeee
Q 016111 379 TVDTVVLRS 387 (395)
Q Consensus 379 s~~a~ll~~ 387 (395)
...+++|+.
T Consensus 398 ~g~a~~~e~ 406 (407)
T 3svk_A 398 MGVATIIER 406 (407)
T ss_dssp CEEEEEEEE
T ss_pred ceEEEEEEc
Confidence 556677764
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=171.82 Aligned_cols=258 Identities=14% Similarity=0.136 Sum_probs=173.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCc-C----EEEEEecCC---------------------------CCCCCHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQI-T----HLIFCSLVG---------------------------VDMPGADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~I-d----~vi~~s~t~---------------------------~~~p~~a~~l~~~L 148 (395)
....|+.+|+++||+++|+++++| | .|+++++.+ +..+..+.+|+..|
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 467899999999999999999999 7 688777631 12345789999999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------------------cCCCCCCCc
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------------------FRGPSDANL 206 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------------------~~~~~~~~~ 206 (395)
|+... +++++.+|+|++.||..|.++|++|.++.|||+++|..+.. ...|.+
T Consensus 181 gl~Gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd--- 254 (451)
T 4ddo_A 181 RFRGP---LGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFD--- 254 (451)
T ss_dssp TCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTB---
T ss_pred cCCCc---eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccc---
Confidence 99863 78999999999999999999999999999999999986421 001111
Q ss_pred hhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
....++++||||+|+||++.+. .+ ..+..++.+.+....+.. +. ...+. .....++
T Consensus 255 -~~~~g~v~gdGAaavvL~~~~~A~~~g--~~i~a~i~g~~~~~d~~~---~~-~~~~~--------------~~~~~~a 313 (451)
T 4ddo_A 255 -RDRDGFVMGEGAAMVVVESLDHALARG--ARPIAEIIGYGTTADAYH---MT-AGPDD--------------GSGAMRA 313 (451)
T ss_dssp -TTCCSBCBBCEEEEEEEEEHHHHHHTT--CCCSEEEEEEEEEECCSC---SS-CCCTT--------------CHHHHHH
T ss_pred -cCCCCcEEeceEEEEEEeeHHHHHhCC--CceEEEEEEEEEecCCCc---cC-CCCCC--------------HHHHHHH
Confidence 1234789999999999987532 11 122345554332211110 00 00001 1234578
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAIVN-----QIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~ 357 (395)
++++|+++|+++ +|| ++.+|..+..+.+ .+.+.++.. .+++.+ ..-..+||+.+|+-.+.|..++... ++
T Consensus 314 i~~al~~Agl~~-~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l-~~ 389 (451)
T 4ddo_A 314 MKLALRMGDVAP-EQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAIS-STKSATGHLLGAAGAIEAAFSILAL-RD 389 (451)
T ss_dssp HHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHcCCCH-HHcCEEEecCCcCcccCHHHHHHHHHHhCCC-CCCccc-CchhhhccCHHHHHHHHHHHHHHHH-hc
Confidence 899999999997 999 9999987765443 344556542 222211 1345679999998777766654421 11
Q ss_pred CCccC------------------C----CCCceEEEEEEccchhhhheeeeecC
Q 016111 358 GKVTT------------------G----EGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 358 g~i~~------------------G----~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+.+.| . .+..+++..+||.|.+-++++|+..+
T Consensus 390 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 390 GVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp TEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred CCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 21110 0 01256788899999999999998754
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-18 Score=169.00 Aligned_cols=226 Identities=15% Similarity=0.083 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
..+|+.+|++++|+++ |+++++||.|++++.++ +. .|..+.+++..+|++... ++++++.+|+|++.||.+|.++|
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~-p~~~v~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSV-PAVTVNRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTS-CCEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCC-cEeEecCcchHHHHHHHHHHHHH
Confidence 7899999999999999 99999999999999888 43 788999999999997443 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc------------------------------------------------------------c
Q 016111 179 ENNPGARVLVVCSDLSLGT------------------------------------------------------------F 198 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~------------------------------------------------------------~ 198 (395)
++|.++.|||+++|.+|.. |
T Consensus 106 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f 185 (387)
T 3goa_A 106 MTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAF 185 (387)
T ss_dssp HTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCc
Confidence 9999999999999987641 0
Q ss_pred CC------------------CCCC-----------------Cc----hhhhhhhhhccccEEEEEecCCCC-CCCCCCce
Q 016111 199 RG------------------PSDA-----------------NL----GCLAGQALFGDGAAALIIGANPDT-TLSEKPLF 238 (395)
Q Consensus 199 ~~------------------~~~~-----------------~~----~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~ 238 (395)
.+ +++. ++ -....++..+|||+|+||.+.+.. ..+..+..
T Consensus 186 ~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a 265 (387)
T 3goa_A 186 KTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRA 265 (387)
T ss_dssp TTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCE
T ss_pred ccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccE
Confidence 00 0000 00 001234567899999999875421 00012234
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAK 317 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~ 317 (395)
.+.+.+...... . .. + .....+++++|+++|+++ +|| ++-+|...........+.
T Consensus 266 ~i~g~~~~~~~~--~-------~~------~--------~~~~~a~~~al~~agl~~-~did~ve~h~~f~~~~~~~~~~ 321 (387)
T 3goa_A 266 RIRSMAVVGCDP--S-------IM------G--------YGPVPASKLALKKAGLSA-SDIDVFEMNEAFAAQILPCIKD 321 (387)
T ss_dssp EEEEEEEEECCT--T-------ST------T--------CTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHH
T ss_pred EEEEEEEcCCCC--C-------cc------h--------HHHHHHHHHHHHHcCCCH-HHcCEEEEeCcchHHHHHHHHH
Confidence 554433221100 0 00 0 012467889999999997 999 999999998877777889
Q ss_pred cCC---CccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 318 LGL---KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 318 lgi---~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
||+ +.+++..+ .....+||+.+|+-...+.+++..
T Consensus 322 lg~~~~~~~~vn~~-gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 322 LGLMEQIDEKINLN-GGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hCCCcCCCccCCCC-CchhcccCCHHHHHHHHHHHHHHH
Confidence 999 55555432 123458999777766666655553
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-17 Score=162.02 Aligned_cols=258 Identities=14% Similarity=0.132 Sum_probs=168.4
Q ss_pred hHHHHHHHHHHHHHHHhCCC---CCCcCEEEEEecCC-C-----------------C--------CC-CHHHHHHHHcCC
Q 016111 101 EVPKLGEEAATKAIKEWGQS---KSQITHLIFCSLVG-V-----------------D--------MP-GADYQLTKMLGL 150 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~---~~~Id~vi~~s~t~-~-----------------~--------~p-~~a~~l~~~Lgl 150 (395)
....|+.+|+++||+++|++ +++|+ |+++++++ + . .+ ..+.+|+..||+
T Consensus 98 ~~~~l~l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl 176 (434)
T 2gp6_A 98 YLQRMSTVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA 176 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC
Confidence 46789999999999999984 44554 66666654 3 1 12 368899999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cCC-----CCCC-C-chhhhhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FRG-----PSDA-N-LGCLAGQ 212 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~~-----~~~~-~-~~~~~~~ 212 (395)
+.. +++++.+|+|++.||.+|.++|++|.++.+||+++|..+.. ... |... . .+....+
T Consensus 177 ~Gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g 253 (434)
T 2gp6_A 177 KAG---VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDG 253 (434)
T ss_dssp CSC---EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCC
T ss_pred CCC---eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCC
Confidence 853 78999999999999999999999999999999999986531 111 1110 0 1112347
Q ss_pred hhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 213 ALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 213 ~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
+++||||+|+||++.+. .+ .....++.+.+....... +. .++ . ......++++++|+
T Consensus 254 ~v~gdGAaavvL~~~~~A~~~g--~~i~a~I~g~~~~~Dg~~---~~---~p~-------~-----~~~~~~~ai~~al~ 313 (434)
T 2gp6_A 254 FVFGEGGALLLIETEEHAKARG--ANILARIMGASITSDGFH---MV---APD-------P-----NGERAGHAITRAIQ 313 (434)
T ss_dssp CCBBCCEEEEEEEEHHHHHTTT--CCCCEEEEEEEEEECCSC---SS---SCC-------T-----TCHHHHHHHHHHHH
T ss_pred cceecceEEEEeCcHHHHHHCC--CceEEEEEEEEEecCCCC---CC---CCC-------C-----ChHHHHHHHHHHHH
Confidence 89999999999987542 11 112344443322110000 00 000 0 01235678999999
Q ss_pred cCCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCC
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIVN-----QIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG 363 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~~-----~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G 363 (395)
++|+++ +|| ++.+|..+..+.+ .+.+.+|-. ++..+ .....+||+.+|+-.+.|..++.. .+++.+.|-
T Consensus 314 ~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~~~~ipp~ 388 (434)
T 2gp6_A 314 LAGLAP-GDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVY-APKSALGHSVGAVGAVESILTVLA-LRDQVIPPT 388 (434)
T ss_dssp HTTCCT-TTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEC-CTHHHHCBCTTTHHHHHHHHHHHH-HHHSCCCCC
T ss_pred HcCCCH-HHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCcc-cchhhhcCchhhhHHHHHHHHHHH-HhcCccCCC
Confidence 999998 999 9999977766533 334445421 22221 146789999999888777665442 111332100
Q ss_pred ---------------------CCCceEEEEEEccchhhhheeeee
Q 016111 364 ---------------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 364 ---------------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+..+++..+||.|.+-++++|+.
T Consensus 389 ~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 389 LNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp SSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 012567888999999988888863
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.77 E-value=9e-17 Score=159.20 Aligned_cols=256 Identities=13% Similarity=0.124 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHHhCC-CCCCcC----EEEEEecCC---------------------------CCCCCHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQ-SKSQIT----HLIFCSLVG---------------------------VDMPGADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~-~~~~Id----~vi~~s~t~---------------------------~~~p~~a~~l~~~L 148 (395)
....|+.+|+++||+++|+ ++++|| .|+++++++ +..+..+.+|+..|
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 4678999999999999999 778888 888887652 12345789999999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c-----CCC-----CC--CCchhhhhh
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----F-----RGP-----SD--ANLGCLAGQ 212 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----~-----~~~-----~~--~~~~~~~~~ 212 (395)
|++.. .+.++.+|+|++.||..|.++|++|.++.+||+++|.++.. | ..+ .. ...+....+
T Consensus 156 gl~gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G 232 (412)
T 4ewg_A 156 DLKGR---IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDG 232 (412)
T ss_dssp TCCSC---EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCC
T ss_pred CCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCC
Confidence 99863 78899999999999999999999999999999999986521 0 000 00 001122357
Q ss_pred hhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 213 ALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 213 ~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
+++||||+|+||++.+. .+ .....++...+... +|.++. .+ ......++++++|+
T Consensus 233 ~~~geGAaavvL~~~~~A~~~g--~~i~a~i~g~~~~~--------------dg~~~~-~p-----~~~~~~~ai~~Al~ 290 (412)
T 4ewg_A 233 LVVGEGAATLVLEEYEHAKARG--ATIHAEIVGFGCNS--------------DGAHMT-QP-----TASTMARAMQLALE 290 (412)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEE--------------CSSCSS-SC-----CHHHHHHHHHHHHH
T ss_pred CceECeEEEEEEccHHHHhhCC--CcEEEEEEEEEEcC--------------CCCCCC-CC-----CHHHHHHHHHHHHH
Confidence 89999999999997432 11 11234444433211 110000 01 12345678999999
Q ss_pred cCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC-
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~- 362 (395)
++|+++ +|| ++..|..+....+. +.+.++-. ++.+ .+-..+||+.+|+-.+.+...+... +++.+.|
T Consensus 291 ~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~---~~v~-s~K~~~GH~~gAsG~~~~~~~~~~l-~~~~ipp~ 364 (412)
T 4ewg_A 291 DAKLDA-NAIAYVNAHGTSTDRGDVAESQATARTFGER---MPIS-SLKSYVGHTLGACGALEAWWTIEMM-KRNWYAPT 364 (412)
T ss_dssp HTTCCG-GGEEEEECCCCCCHHHHHHHHHHHHHHHCTT---CEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEECCC
T ss_pred HcCCCH-HHCCEEEccCCCCccccHHHHHHHHHHcCCC---Ceee-CccccccccHHHHHHHHHHHHHHHH-hcCCcCCC
Confidence 999998 999 99999988765543 34555522 2211 1345579999998776666544321 1121110
Q ss_pred -----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 -----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
. .+.++++..+||.|.+-++++|+.
T Consensus 365 ~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 365 LNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp TTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred CCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 0 012678899999999999999875
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-18 Score=166.11 Aligned_cols=253 Identities=15% Similarity=0.072 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+.+|+.+|++++|+++|+++++||.|++++.++ +. .|..+.+++..||++... ++++++.+|+|++.||..|.++|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV-AGCTVNRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC-EEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc-cEeeccccchHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998887 44 688999999999996432 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc-ccCCC--------C-----C--------CCch-h----------------------------
Q 016111 180 NNPGARVLVVCSDLSLG-TFRGP--------S-----D--------ANLG-C---------------------------- 208 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~-~~~~~--------~-----~--------~~~~-~---------------------------- 208 (395)
+|.++.||++++|.++. .+..+ . + .... +
T Consensus 105 ~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~ 184 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRF 184 (401)
T ss_dssp TTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999998764 11000 0 0 0000 0
Q ss_pred -----------------------------------------------------h--h--hhhh-------hccccEEEEE
Q 016111 209 -----------------------------------------------------L--A--GQAL-------FGDGAAALII 224 (395)
Q Consensus 209 -----------------------------------------------------~--~--~~~~-------fGDgAaA~vl 224 (395)
+ + .+++ ++|||+|+||
T Consensus 185 a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAaavvL 264 (401)
T 1ulq_A 185 ALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLL 264 (401)
T ss_dssp HHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCccchheEEEE
Confidence 0 0 0122 5999999999
Q ss_pred ecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE
Q 016111 225 GANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI 302 (395)
Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 302 (395)
.+.+.. ..+..+..++.+.+.... . +... ......+++++|+++|+++ +|| ++=
T Consensus 265 ~s~~~A~~~g~~~~a~i~g~~~~~~--~------------------p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie 320 (401)
T 1ulq_A 265 VSDDYAKAHGLRPLARVRAIAVAGV--P------------------PRIM---GIGPVPATRKALERAGLSF-SDLGLIE 320 (401)
T ss_dssp EEHHHHHHTTCCCSEEEEEEEEEEC--C------------------GGGG---GGTHHHHHHHHHHHTTCCG-GGCSEEE
T ss_pred ecHHHHHHcCCCceEEEEEEEEecC--C------------------cccc---chhHHHHHHHHHHHcCCCH-HHcCEEE
Confidence 875421 000123355554432210 0 0000 0112467889999999997 999 899
Q ss_pred EcCCChHHHHHHHHHcCC--CccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhh
Q 016111 303 VQPGGPAIVNQIEAKLGL--KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTV 380 (395)
Q Consensus 303 ~hq~~~~~~~~i~~~lgi--~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~ 380 (395)
.|-......-...+.||+ +.+++..+ -....+||..+|+-...+.+++.... .+ .+ .+.|..++|.|..-
T Consensus 321 ~heafa~~~l~~~~~lg~~~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~L~-~~---~~---~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 321 LNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMR-RR---KV---QFGLATMCIGVGQG 392 (401)
T ss_dssp ECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH-HT---TC---SEEEEEEEETTTEE
T ss_pred EecchHHHHHHHHHHcCCCCCCCccCCC-CcccccCCCcchHHHHHHHHHHHHHh-hc---CC---CEEEEEeecCCccc
Confidence 998766433334567898 55554332 13456999998877777776665411 11 23 56677767666666
Q ss_pred hheeeee
Q 016111 381 DTVVLRS 387 (395)
Q Consensus 381 ~a~ll~~ 387 (395)
.+++|+.
T Consensus 393 ~a~v~~~ 399 (401)
T 1ulq_A 393 IAVVVEG 399 (401)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7888875
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=164.73 Aligned_cols=253 Identities=17% Similarity=0.104 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+.+|+.+|++++|+++|+++++||.|+++++++ +..+..+.+++..||++... +.+.++.+|++++.||..|.++|++
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~-p~~~v~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSV-PAWSCQMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-CEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCc-cEEEecCcChhHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998887 55678999999999996332 3789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-cC------------------------C-----------------------------------
Q 016111 181 NPGARVLVVCSDLSLGT-FR------------------------G----------------------------------- 200 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~-~~------------------------~----------------------------------- 200 (395)
|.++.||++++|.++.. +. +
T Consensus 109 G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 188 (397)
T 1wl4_A 109 GDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNR 188 (397)
T ss_dssp TSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 99999999999987631 00 0
Q ss_pred -----------------------------CCCCCc---------hh-h-hh----hhh-------hccccEEEEEecCCC
Q 016111 201 -----------------------------PSDANL---------GC-L-AG----QAL-------FGDGAAALIIGANPD 229 (395)
Q Consensus 201 -----------------------------~~~~~~---------~~-~-~~----~~~-------fGDgAaA~vl~~~~~ 229 (395)
+++..+ .. + +. +++ +||||+|+||.+.+.
T Consensus 189 A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~ 268 (397)
T 1wl4_A 189 TENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSE 268 (397)
T ss_dssp HHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHH
Confidence 000000 00 0 10 346 899999999987542
Q ss_pred C-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC
Q 016111 230 T-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG 307 (395)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~ 307 (395)
. ..+..+..++.+.+.... . +... ......+++++|+++|+++ +|| +|-+|...
T Consensus 269 A~~~g~~~~a~i~g~~~~~~--~------------------p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~d~f 324 (397)
T 1wl4_A 269 ADKRGLTPLARIVSWSQVGV--E------------------PSIM---GIGPIPAIKQAVTKAGWSL-EDVDIFEINEAF 324 (397)
T ss_dssp HHHTTCCCSEEEEEEEEEEC--C------------------GGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCSB
T ss_pred HHHcCCCccEEEEEEEEeec--C------------------hhhc---cchHHHHHHHHHHHcCCCH-HHCCEEEEeccc
Confidence 1 000123355554432210 0 0000 0122467889999999997 999 89999988
Q ss_pred hHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 308 ~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
......+.+.||++.+++..+ .....+||+.+++-...+.+++.... + +.+ .+.|....+.|....+++|+.
T Consensus 325 ~~~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 325 AAVSAAIVKELGLNPEKVNIE-GGAIALGHPLGASGCRILVTLLHTLE--R--MGR---SRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp HHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCcCcCCC-cCccccCCChhhhHHHHHHHHHHHHh--h--cCC---CEEEEEEecccchheEEEEEe
Confidence 777777889999988776542 34678999999987766666655411 1 123 455555444444556788774
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-18 Score=165.88 Aligned_cols=252 Identities=15% Similarity=0.106 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|+++++||.+++++..+ +..+..+.+++..||+++.. +++.++.+|++++.||..|.++|++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~-p~~~v~~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEA-TAWGMNQLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-EEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCc-eEEEecccchHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998887 55678999999999998632 3789999999999999999999999
Q ss_pred CCCCeEEEEEeecccc-ccC---------------C---------CCCC----------------Cch------------
Q 016111 181 NPGARVLVVCSDLSLG-TFR---------------G---------PSDA----------------NLG------------ 207 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~-~~~---------------~---------~~~~----------------~~~------------ 207 (395)
|.++.||++++|.++. .+. + |... +++
T Consensus 106 G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~ 185 (392)
T 2vu1_A 106 GDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNK 185 (392)
T ss_dssp TSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9999999999998753 110 0 0000 000
Q ss_pred ------------------------------h---h----------------hhhhh-------hccccEEEEEecCCCC-
Q 016111 208 ------------------------------C---L----------------AGQAL-------FGDGAAALIIGANPDT- 230 (395)
Q Consensus 208 ------------------------------~---~----------------~~~~~-------fGDgAaA~vl~~~~~~- 230 (395)
+ + ..+++ +||||+|+||.+.+..
T Consensus 186 A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~ 265 (392)
T 2vu1_A 186 AEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEAS 265 (392)
T ss_dssp HHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHH
T ss_pred HHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHHHH
Confidence 0 0 11456 9999999999875431
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
..+..+..++.+.+.... . +... ......+++++|+++|+++ +|| +|-+|.....
T Consensus 266 ~~g~~~~a~i~g~~~~~~--~------------------p~~~---~~~~~~a~~~al~~agl~~-~dId~ie~~d~f~~ 321 (392)
T 2vu1_A 266 RRGIQPLGRIVSWATVGV--D------------------PKVM---GTGPIPASRKALERAGWKI-GDLDLVEANEAFAA 321 (392)
T ss_dssp HHTCCCSEEEEEEEEEEC--C------------------GGGG---GGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHH
T ss_pred hcCCCccEEEEEEEEeec--C------------------hhhc---chhHHHHHHHHHHHcCCCH-HHcCEEEeccccHH
Confidence 000123355554432210 0 0000 0122467889999999997 999 9999988877
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEE-Eccchhhhheeeee
Q 016111 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFG-IGAGVTVDTVVLRS 387 (395)
Q Consensus 310 ~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~-~G~G~s~~a~ll~~ 387 (395)
....+.+.||++.+++..+ .....+||+.+|+-...+.+++..... +.+ .+.|... .| |...++++|+.
T Consensus 322 ~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~~----~~~---~~gl~~~~~g-gG~~~a~~~e~ 391 (392)
T 2vu1_A 322 QACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFEMKR----RGA---RKGLATLCIG-GGMGVAMCIES 391 (392)
T ss_dssp HHHHHHHHHCCCGGGBSTT-CCHHHHCCCGGGHHHHHHHHHHHHHHH----HTC---SEEEEEEEET-TTEEEEEEEEC
T ss_pred HHHHHHHHcCCCcccCCCC-ccHhhhCCChhhHHHHHHHHHHHHHhc----cCC---CEEEEEEecc-cchheEEEEEe
Confidence 6666789999988876542 246779999999888888777664211 123 4455433 44 44556777764
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=162.37 Aligned_cols=324 Identities=12% Similarity=0.043 Sum_probs=197.6
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+|.|.|+|...|-. .+.+++.+.+.. ..+...++. . +...++..+....++.+ + ..+..+ +
T Consensus 23 ~~V~ItG~g~~~p~g-~~~~~~w~~l~~--g~~~i~~~~---~--~~~~~~~~~~~g~~~fd----~--~~~i~~----~ 84 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG-SNTEEVTASLRE--AKSGISRAE---E--YAELGFRCQVHGAPDID----I--ESLVDR----R 84 (428)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHH--TCCCEEECH---H--HHHTTCSCCEEECCCCC----H--HHHSCT----G
T ss_pred CCEEEEeeEEECCCc-CCHHHHHHHHHc--CCCcceeCC---c--ccccCCCcccccccCCC----h--hhcCCH----H
Confidence 469999999999986 577777776531 111111111 1 12234433321111000 0 000000 0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CC--------------------------CCCHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VD--------------------------MPGADYQ 143 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~--------------------------~p~~a~~ 143 (395)
..........|+.+|+++||+++|+++++|| .|+++++.+ +. .+..+.+
T Consensus 85 ~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 164 (428)
T 3mqd_A 85 AMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASAT 164 (428)
T ss_dssp GGTTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHH
Confidence 0001113688999999999999999999998 688887654 11 3357899
Q ss_pred HHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccccc---------CC------CCC--CCc
Q 016111 144 LTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTF---------RG------PSD--ANL 206 (395)
Q Consensus 144 l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~---------~~------~~~--~~~ 206 (395)
|+..||++.. .+.++.+|+|++.||..|.++|++|.++.+|++++|.++... .. |.. ...
T Consensus 165 ia~~lgl~gp---~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpf 241 (428)
T 3mqd_A 165 LATFFKIKGI---NYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAY 241 (428)
T ss_dssp HHHHTTCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTT
T ss_pred HHHHcCCCCc---eeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcc
Confidence 9999999863 789999999999999999999999999999999999865310 00 000 001
Q ss_pred hhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
+....++++||||+|+||++.+. .+ .....++.+.+...... . + ..+. .....++
T Consensus 242 d~~~~G~v~gEGAaavvL~~~~~A~~~g--~~i~a~I~g~~~~~dg~--~-~---~~P~--------------~~~~~~a 299 (428)
T 3mqd_A 242 DKNRDGFVIAGGAGVLVLEDLETALARG--AKIYGEIVGYGATSDGY--D-M---VAPS--------------GEGAIRC 299 (428)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCS--C-S---SSCC--------------SHHHHHH
T ss_pred cCCCCCcccccceEEEEEccHHHHHhCC--CcEEEEEEEEEEcCCCC--C-C---CCCC--------------HHHHHHH
Confidence 12235889999999999997542 11 12234555433211000 0 0 0001 1234568
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~ 357 (395)
++++|+ |++ +|| ++-.|-.+..+.+. +.+.++....++..+ ..-..+||+.+|+-.+.|..++.. .++
T Consensus 300 i~~Al~--gl~--~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~-s~K~~~GH~~gAsG~~~~i~~~~~-l~~ 373 (428)
T 3mqd_A 300 MKMALS--TVT--SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIA-ATKSLTGHSLGATGVQEAIYSLLM-MQN 373 (428)
T ss_dssp HHHHHT--TCC--SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBC-CTHHHHCBCGGGHHHHHHHHHHHH-HHH
T ss_pred HHHHHh--CCc--cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HHh
Confidence 889998 887 788 99999887765444 455666433322221 134557999999987766654332 111
Q ss_pred CCccC----------------------CCCCceEEEEEEccchhhhheeeee
Q 016111 358 GKVTT----------------------GEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 358 g~i~~----------------------G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+.+-| ..+..+++..+||.|.+-++++|+.
T Consensus 374 ~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~ 425 (428)
T 3mqd_A 374 NFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQR 425 (428)
T ss_dssp TEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEee
Confidence 22111 0112578889999999988898874
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-17 Score=161.46 Aligned_cols=250 Identities=15% Similarity=0.089 Sum_probs=169.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE-----EEEEecCC-C---------------------------CCCCHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH-----LIFCSLVG-V---------------------------DMPGADYQLTKM 147 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~-----vi~~s~t~-~---------------------------~~p~~a~~l~~~ 147 (395)
....|+.+|+++||+++|+++++||. |+++++++ + .....+.+|+..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 36789999999999999999888875 88887754 2 012467899999
Q ss_pred cCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c-----------CCCCCCCc
Q 016111 148 LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------F-----------RGPSDANL 206 (395)
Q Consensus 148 Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~-----------~~~~~~~~ 206 (395)
||+... ++.++.+|+|++.||..|.++|++|.++.+||+++|..+.. + ..|.+
T Consensus 150 lgl~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd--- 223 (406)
T 2vba_A 150 FKIHGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYD--- 223 (406)
T ss_dssp TTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTB---
T ss_pred ccCCCc---eeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCc---
Confidence 999863 78999999999999999999999999999999999986431 0 01211
Q ss_pred hhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
....++++||||+++||++.+. .+ .....++.+.+....... +. .++ .....++
T Consensus 224 -~~~~G~v~gEGaaavvL~~~~~A~~~g--~~i~a~I~g~~~~~dg~~---~t---~p~--------------~~~~~~a 280 (406)
T 2vba_A 224 -AHRDGFVIAGGGGMVVVEELEHALARG--AHIYAEIVGYGATSDGAD---MV---APS--------------GEGAVRC 280 (406)
T ss_dssp -TTCCSBCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCSC---TT---SCC--------------SHHHHHH
T ss_pred -CCCCceEeeceEEEEEeCcHHHHHHCC--CeEEEEEEEEEEcCCCCC---CC---CCC--------------HHHHHHH
Confidence 1224789999999999987542 11 112344544332111100 00 001 1235578
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAIV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~ 357 (395)
++++|+++| +|| ++..|..+..+. +.+.+.+|...-.+. + +-..+||+.+|+-.+.|..++.. .++
T Consensus 281 i~~al~~ag----~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v~-s--~K~~~GH~~gAaG~~~~i~~~l~-l~~ 352 (406)
T 2vba_A 281 MKMAMHGVD----TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAIS-A--TKAMTGHSLGAAGVQEAIYSLLM-LEH 352 (406)
T ss_dssp HHHHHTTCC----SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEE-C--THHHHCBCGGGHHHHHHHHHHHH-HHH
T ss_pred HHHHHhhCC----CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCcee-C--chhhhcccHHHHHHHHHHHHHHH-Hhc
Confidence 999999999 467 999999887763 345566764321222 2 34568999999988877765542 111
Q ss_pred CCccC-----------C----------CCCceEEEEEEccchhhhheeeee
Q 016111 358 GKVTT-----------G----------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 358 g~i~~-----------G----------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+.+.| + .+..+++..+||.|.+-++++|+.
T Consensus 353 ~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 403 (406)
T 2vba_A 353 GFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 403 (406)
T ss_dssp TEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEe
Confidence 32110 0 012567888999999988888874
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-17 Score=164.20 Aligned_cols=258 Identities=12% Similarity=0.115 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCcC----EEEEEecCC-C-----------------CC---------CCHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQ-SKSQIT----HLIFCSLVG-V-----------------DM---------PGADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~-~~~~Id----~vi~~s~t~-~-----------------~~---------p~~a~~l~~~Lg 149 (395)
..+|+.+|+++||+++|+ ++++|| .|+++++++ + .. ...+.+|+..||
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 578999999999999999 888887 577776542 1 11 247899999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccccc----------CC------CCCCC--chhhhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTF----------RG------PSDAN--LGCLAG 211 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~----------~~------~~~~~--~~~~~~ 211 (395)
++.. +++++.+|+|++.||.+|.++|++|.++.+||+++|.++... .. |.... .+....
T Consensus 168 l~gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 244 (431)
T 2ix4_A 168 FQGP---NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRD 244 (431)
T ss_dssp CCSC---EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCC
T ss_pred CCCc---eeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCCC
Confidence 9863 789999999999999999999999999999999999754210 00 00000 111234
Q ss_pred hhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 212 QALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 212 ~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
++++||||+|+||++.+. .+ .....++...+...... . +. .++ . ......++++++|
T Consensus 245 g~~~gdGAaavvL~~~~~A~~~g--~~i~a~i~g~~~~~dg~--~-~~---~p~-------~-----~~~~~~~ai~~al 304 (431)
T 2ix4_A 245 GFVIGEGSGVIVLEEYEHAKRRG--AKIYAELCGYGMSGDAH--H-IT---QPP-------E-----DGKGAVLAMTRAL 304 (431)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECCS--C-SS---CCC-------T-----TCHHHHHHHHHHH
T ss_pred CceeecceEEEEEccHHHHHhCC--CceEEEEeeeeecCCCC--C-CC---CCC-------C-----CHHHHHHHHHHHH
Confidence 789999999999987542 11 11234444332211000 0 00 000 0 0123457889999
Q ss_pred ccCCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPAIVN-----QIEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~~~~-----~i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
+++|+++ +|| ++.+|..+..+.+ .+.+.++... ++++.+ .....+||+.+|+-.+.|...+.. .+++.+
T Consensus 305 ~~agl~~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-l~~~~i 381 (431)
T 2ix4_A 305 RQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILA-IHHGVA 381 (431)
T ss_dssp HHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEE
T ss_pred HHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HhcCCc
Confidence 9999997 999 9999988766433 3444454321 233321 135689999999988777765542 111221
Q ss_pred c----------------------C--CCCCceEEEEEEccchhhhheeeee
Q 016111 361 T----------------------T--GEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 361 ~----------------------~--G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
. + + ..+++..+||.|.+-++++|+.
T Consensus 382 pp~~~~~~~~p~~~~~~v~~~~~~~~~--~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 382 PMTLNVKNPDPIFDKRFMPLTTSKKML--VRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp CCCTTCSSBCTTCCSSSCCCSSCEECC--CSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCcccCCccccccCC--CCEEEEecccCCCeeEEEEEee
Confidence 0 0 1 2578888999999988888863
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=162.16 Aligned_cols=250 Identities=19% Similarity=0.203 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|+++++||.+++++..+ +..+..+.+++..||++... ++++++.+|++++.||..|.++|++
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~-p~~~v~~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST-PCTTINKVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC-CEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc-eEEEecccccHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998877 66778999999999995322 3799999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c--------------------CC---CC----------------CCCchh------------
Q 016111 181 NPGARVLVVCSDLSLGT-F--------------------RG---PS----------------DANLGC------------ 208 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~-~--------------------~~---~~----------------~~~~~~------------ 208 (395)
|.++.+|++++|.++.. + .. +. ..++++
T Consensus 111 G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a 190 (395)
T 2ib8_A 111 GHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRS 190 (395)
T ss_dssp TSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999999999986531 1 00 00 000000
Q ss_pred --------------------------------------------------hhhhhh-------hccccEEEEEecCCCC-
Q 016111 209 --------------------------------------------------LAGQAL-------FGDGAAALIIGANPDT- 230 (395)
Q Consensus 209 --------------------------------------------------~~~~~~-------fGDgAaA~vl~~~~~~- 230 (395)
...+++ .||||+|+||.+.+..
T Consensus 191 ~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~ 270 (395)
T 2ib8_A 191 KAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAK 270 (395)
T ss_dssp HHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHH
T ss_pred HhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHH
Confidence 002455 8999999999875421
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
..+..+..++.+.+... +. +..+ ......+++++|+++|+++ +|| ++-+|.....
T Consensus 271 ~~g~~~~a~I~g~~~~~---~~-----------------p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~D~f~~ 326 (395)
T 2ib8_A 271 RLNVTPLARIVAFADAA---VE-----------------PIDF---PIAPVYAASMVLKDVGLKK-EDIAMWEVNEAFSL 326 (395)
T ss_dssp HTTCCCCEEEEEEEEEE---CC-----------------GGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBHH
T ss_pred hcCCCccEEEEEEEEec---cC-----------------hhhc---cccHHHHHHHHHHHcCCCH-HHcCEEEEccccHH
Confidence 00012234555443211 00 0000 0123457889999999997 999 8888987765
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEE-EEEccchhhhheeeee
Q 016111 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVM-FGIGAGVTVDTVVLRS 387 (395)
Q Consensus 310 ~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll-~~~G~G~s~~a~ll~~ 387 (395)
..-...+.||++.+++..+ .....+||+.+|+-...+.+++.. ++.| .+.+. +..|.| ...+++|+.
T Consensus 327 ~~l~~~e~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~------L~~~---~~gl~~~~~ggG-~g~a~~~~~ 394 (395)
T 2ib8_A 327 VVLANIKMLEIDPQKVNIN-GGAVSLGHPIGMSGARIVGHLTHA------LKQG---EYGLASICNGGG-GASAMLIQK 394 (395)
T ss_dssp HHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH------SCTT---CEEEEEEEETTT-EEEEEEEEE
T ss_pred HHHHHHHHcCCCccccCCC-cchhhcCCChhHHHHHHHHHHHHH------HhhC---CceEEEEecccC-HhheEEEEc
Confidence 5555567799988776542 245779999999999999988876 4445 55554 334444 334667653
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-16 Score=157.34 Aligned_cols=328 Identities=13% Similarity=0.109 Sum_probs=195.9
Q ss_pred CCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChh
Q 016111 13 GGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLD 92 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
...+|.|+|+|...|-. .+.+++.+.+.. ..+...++. .|-.+..++..+. ...-.. ++. .+ +.
T Consensus 10 ~~~~vaI~G~g~~~p~g-~~~~~~w~~l~~--g~~~i~~~~---~~~~~~~~~~~~~-~~~~~~---d~~--~~----~~ 73 (416)
T 2wge_A 10 GFPSVVVTAVTATTSIS-PDIESTWKGLLA--GESGIHALE---DEFVTKWDLAVKI-GGHLKD---PVD--SH----MG 73 (416)
T ss_dssp SSCCEEEEEEEEEESSC-SSHHHHHHHHHT--TCCCCEECC---CHHHHHHTCSCCE-EBCCSS---CGG--GG----CC
T ss_pred CCCcEEEEeeEEECCCC-CCHHHHHHHHHc--CCCEEEeCC---ccccccccCCccE-EEEeCC---chh--hh----CC
Confidence 34579999999999997 577777776531 111000000 0100011222221 110000 000 00 11
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CC-----------------CC---------CHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VD-----------------MP---------GAD 141 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~-----------------~p---------~~a 141 (395)
.+..........|+.+|+++||+++|+ +++| .|+++++++ +. .| ..+
T Consensus 74 ~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 151 (416)
T 2wge_A 74 RLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAA 151 (416)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHH
Confidence 111222234678999999999999998 4555 377777764 31 12 468
Q ss_pred HHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cCC----CCCC-C
Q 016111 142 YQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FRG----PSDA-N 205 (395)
Q Consensus 142 ~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~~----~~~~-~ 205 (395)
.+|+..||++.. +++++.+|+|++.||.+|.++|++|.++.+||+++|..+.. +.. |... .
T Consensus 152 ~~ia~~lgl~gp---~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 228 (416)
T 2wge_A 152 AVIGLQLGARAG---VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASR 228 (416)
T ss_dssp HHHHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCC
T ss_pred HHHHHHhccCCC---cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCccccc
Confidence 899999999853 78999999999999999999999999999999999986532 110 0000 0
Q ss_pred -chhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHH
Q 016111 206 -LGCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIE 281 (395)
Q Consensus 206 -~~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 281 (395)
.+....+++|||||+|+||++.+. .+ .....++.+.+...... . +. . +.. ......
T Consensus 229 pfd~~~dg~v~geGaaavvL~~~~~A~~~g--~~~~a~i~g~~~~~dg~--~-~~---~---------p~~---~~~~~~ 288 (416)
T 2wge_A 229 PFDKDRDGFVFGEAGALMLIETEEHAKARG--AKPLARLLGAGITSDAF--H-MV---A---------PAA---DGVRAG 288 (416)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTT--CCCSEEEEEEEEEECCS--C-SS---S---------CCT---TCHHHH
T ss_pred ccccCCCCccccCceEEEEECcHHHHHHCC--CceEEEEEEEEEecCCC--C-cc---C---------CCC---ChHHHH
Confidence 011235789999999999987542 11 11234454332211000 0 00 0 000 012345
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHH----HHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIE----AKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~----~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
++++++|+++|+++ +|| ++.+|..+...-+.+. +.++.. ++..+ ..-..+||+.+|+-.+.|...+.. .+
T Consensus 289 ~ai~~al~~agl~~-~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v~-s~k~~~GH~~gAsG~~~~i~~~l~-l~ 363 (416)
T 2wge_A 289 RAMTRSLELAGLSP-ADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVY-APKSALGHSIGAVGALESVLTVLT-LR 363 (416)
T ss_dssp HHHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHcCCCH-HHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCcc-CCcccccCcHHHHHHHHHHHHHHH-Hh
Confidence 78899999999997 999 9999988776544432 334432 22221 146778999999888876655432 11
Q ss_pred cCCcc----------------------CCCCCceEEEEEEccchhhhheeeee
Q 016111 357 EGKVT----------------------TGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 357 ~g~i~----------------------~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++.+. +. +..+++..+||.|.+-++++|+.
T Consensus 364 ~~~ipp~~~~~~~~p~~~~~~v~~~~~~~-~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 364 DGVIPPTLNYETPDPEIDLDVVAGEPRYG-DYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp HTEECCCTTCCSBCTTTCCEECCSSCEEC-CCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCcCCCCCCCCCCCCCCcccCCCCCccC-CCCEEEEeCcccCceeEEEEEEe
Confidence 12211 11 12568888999999988888863
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-17 Score=161.19 Aligned_cols=226 Identities=12% Similarity=0.050 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHhC----CCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWG----QSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag----~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ 176 (395)
+.+|+.+|++++|+++| +++++||.|++++.++ +..|..+.+++..||++... ++++++.+|++++.||..|.+
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCasg~~Al~~A~~ 113 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYST-PFVALNRQCSSGLTAVNDIAN 113 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS-CEEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCc-eEEEEcCcCHHHHHHHHHHHH
Confidence 78999999999999999 9999999999998887 55667899999999996322 389999999999999999999
Q ss_pred HHHcCCCCeEEEEEeecccc-ccC---------------C----------------------------------------
Q 016111 177 FAENNPGARVLVVCSDLSLG-TFR---------------G---------------------------------------- 200 (395)
Q Consensus 177 ll~~g~~~~vLvv~~d~~s~-~~~---------------~---------------------------------------- 200 (395)
+|++|.++.+|++++|.++. .+. .
T Consensus 114 ~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~ 193 (393)
T 1afw_A 114 KIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYK 193 (393)
T ss_dssp HHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh
Confidence 99999999999999997652 010 0
Q ss_pred ------------C-----------CCCCc-----h----h-h-h--h-hhh-------hccccEEEEEecCCCC-CCCCC
Q 016111 201 ------------P-----------SDANL-----G----C-L-A--G-QAL-------FGDGAAALIIGANPDT-TLSEK 235 (395)
Q Consensus 201 ------------~-----------~~~~~-----~----~-~-~--~-~~~-------fGDgAaA~vl~~~~~~-~~~~~ 235 (395)
| ++.-+ + . + + . +++ ++|||+|+||.+.+.. ..+..
T Consensus 194 ~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~ 273 (393)
T 1afw_A 194 AKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLP 273 (393)
T ss_dssp HHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCC
T ss_pred hHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCC
Confidence 0 00000 0 0 0 0 0 223 6999999999875421 00012
Q ss_pred CceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH
Q 016111 236 PLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI 314 (395)
Q Consensus 236 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i 314 (395)
+..++.+.+.... . +... ......+++++|+++|+++ +|| ++=.|-.....--..
T Consensus 274 ~~a~i~g~~~~~~--~------------------p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~h~~ft~~~l~~ 329 (393)
T 1afw_A 274 VLGRYIDFQTVGV--P------------------PEIM---GVGPAYAIPKVLEATGLQV-QDIDIFEINEAFAAQALYC 329 (393)
T ss_dssp CCEEEEEEEEEEC--C------------------GGGG---GGHHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHH
T ss_pred ccEEEEEEEEecc--C------------------hhhc---chhHHHHHHHHHHHcCCCH-HHCCEEEEeccCHHHHHHH
Confidence 3345554432211 0 0110 0122468889999999997 999 899998776544444
Q ss_pred HHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 315 ~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
.+.||++.+++..+ --...+||..+|+-...+.+++..
T Consensus 330 ~~~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~ 367 (393)
T 1afw_A 330 IHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE 367 (393)
T ss_dssp HHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHhCCCCcCcCCC-CChhhcCCchhhHHHHHHHHHHHH
Confidence 57799987776532 124459999999988888888776
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.2e-17 Score=160.44 Aligned_cols=253 Identities=13% Similarity=0.066 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
..+|+.+|++++|+++ |+++++||.|+++++++ +. .+..+.+++..||++... +.+.++.+|++++.||..|.++|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~-p~~~v~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTS-AAQTVSRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTS-EEEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCc-cEEEEcccchhHHHHHHHHHHHH
Confidence 7899999999999999 99999999999998877 33 477899999999996433 37899999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc-cC-----CCC-------------C----------CCch----------------------
Q 016111 179 ENNPGARVLVVCSDLSLGT-FR-----GPS-------------D----------ANLG---------------------- 207 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~-~~-----~~~-------------~----------~~~~---------------------- 207 (395)
++|.++.+|++++|.++.. +. ++. . .+++
T Consensus 109 ~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~ 188 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF 188 (390)
T ss_dssp HTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999987531 10 100 0 0000
Q ss_pred ---------------------h--------------------hhhhhh-------hccccEEEEEecCCCC-CCCCCCce
Q 016111 208 ---------------------C--------------------LAGQAL-------FGDGAAALIIGANPDT-TLSEKPLF 238 (395)
Q Consensus 208 ---------------------~--------------------~~~~~~-------fGDgAaA~vl~~~~~~-~~~~~~~~ 238 (395)
+ ...+++ +||||+|+||.+.+.. ..+..+..
T Consensus 189 ~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a 268 (390)
T 1wdk_C 189 KDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLA 268 (390)
T ss_dssp TTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSE
T ss_pred ccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccE
Confidence 0 013457 9999999999875421 00012234
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAK 317 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~ 317 (395)
++.+.+.... . +... ......+++++|+++|+++ +|| ++-+|.........+.+.
T Consensus 269 ~I~g~~~~~~--~------------------p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~~~~~~~~~~ 324 (390)
T 1wdk_C 269 VIRSMAVAGV--D------------------PAIM---GYGPVPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKD 324 (390)
T ss_dssp EEEEEEEEEC--C------------------GGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHH
T ss_pred EEEEEEEecc--C------------------hhhc---chhHHHHHHHHHHHcCCCh-hhCcEEEeccCCHHHHHHHHHH
Confidence 5554432210 0 0000 0112367889999999997 999 889998887666777889
Q ss_pred cCCC---ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 318 LGLK---QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 318 lgi~---~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
||++ .+++..+ .....+||+.+++-...+.+++.... ++ .+ .+.+....+.|....+++|+.
T Consensus 325 lg~~~~~~~~vn~~-gg~~~~GHp~gasG~~~~~~~~~~L~-~~---~~---~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 325 LKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNVMK-QN---GG---TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH-HT---TC---SEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCCCCcCCCC-cCcccccCCcchhHHHHHHHHHHHHh-hc---CC---CEEEEEecccchheEEEEEEe
Confidence 9997 4454331 13567899999997666666555411 01 23 455554444444556777764
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-17 Score=161.45 Aligned_cols=256 Identities=12% Similarity=0.066 Sum_probs=169.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|+++++||.|++++.++ + ..|..+.+++..||++... ++++++.+|+|++.||.+|.++|
T Consensus 54 ~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSg~~Al~~A~~~I 132 (442)
T 2wu9_A 54 YPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-AVRTVNRQCSSGLQAVADVAAAI 132 (442)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTS-CEEEEECGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCc-eEEEeCCcCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876 3 2456789999999996322 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc-cCC-----------------------------------------------------CCC-
Q 016111 179 ENNPGARVLVVCSDLSLGT-FRG-----------------------------------------------------PSD- 203 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~-~~~-----------------------------------------------------~~~- 203 (395)
++|.++.||++++|.++.. +.. |..
T Consensus 133 ~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag 212 (442)
T 2wu9_A 133 KAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAG 212 (442)
T ss_dssp HTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcc
Confidence 9999999999999987641 100 000
Q ss_pred -CCc----------------------------------hh-----h-h--hhhh-------hccccEEEEEecCCCC-CC
Q 016111 204 -ANL----------------------------------GC-----L-A--GQAL-------FGDGAAALIIGANPDT-TL 232 (395)
Q Consensus 204 -~~~----------------------------------~~-----~-~--~~~~-------fGDgAaA~vl~~~~~~-~~ 232 (395)
.+. ++ + + .+++ ++|||+|+||.+.+.. ..
T Consensus 213 ~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~ 292 (442)
T 2wu9_A 213 KFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQK 292 (442)
T ss_dssp TTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHH
T ss_pred cccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHc
Confidence 000 00 0 0 0122 5999999999875421 00
Q ss_pred CCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHH
Q 016111 233 SEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV 311 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~ 311 (395)
+..+..++.+.+.... .+..+ ......+++++|+++|+++ +|| +|=.|-.....-
T Consensus 293 g~~~~a~I~g~~~~~~--------------------~p~~~---~~~~~~A~~~Al~~AGl~~-~DId~iE~h~aft~~~ 348 (442)
T 2wu9_A 293 GLPVLGVFRTFAAVGV--------------------DPAIM---GIGPAVAIPAAVKAAGLEL-DDIDLFEINEAFASQF 348 (442)
T ss_dssp TCCCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHTTCCG-GGCCEEEECCSBHHHH
T ss_pred CCCceEEEEEEEEecC--------------------Cchhc---chHHHHHHHHHHHHcCCCH-HHCCEEEEeCCChHHH
Confidence 0122345554432110 01111 0122368889999999997 999 899998876654
Q ss_pred HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEE-EEEccchhhhheeeeec
Q 016111 312 NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVM-FGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 312 ~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll-~~~G~G~s~~a~ll~~~ 388 (395)
-...+.||++.+++..+ --...+||..+|+-...+.+++......+ ..+ .+.|. .++|.| ...+++|+..
T Consensus 349 l~~~~~lG~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~~~---~~glas~~~GGG-~~~a~v~~~~ 419 (442)
T 2wu9_A 349 VYCRNKLGLDPEKINVN-GGAMAIGHPLGATGARCVATLLHEMKRRG--KDC---RFGVVSMCIGTG-MGAAAVFERG 419 (442)
T ss_dssp HHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHHHC--TTC---CEEEEEEEETTT-EEEEEEEEEC
T ss_pred HHHHHHhCCCCCCcCCC-ccHhhcCCchhHHHHHHHHHHHHHHhccC--CCC---CEEEEEeecccc-hheEEEEEec
Confidence 44557899988776432 12445999988877777766655411111 012 45553 557744 5556777653
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=164.50 Aligned_cols=263 Identities=13% Similarity=0.133 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CCC-------------C-----CHHHHHHHHcCCCCccccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VDM-------------P-----GADYQLTKMLGLNPSVKRV 157 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~~-------------p-----~~a~~l~~~Lgl~~~~~~~ 157 (395)
....|+.+|+++||+++|+++++|| .|+++++++ |.. | ..+.+|+..||++.. +
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gp---s 170 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGP---S 170 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCSC---E
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCCC---E
Confidence 4678999999999999999999999 488887765 421 1 367899999999863 7
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCC--CCchhhhhhhhhccccEEEEEe
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPSD--ANLGCLAGQALFGDGAAALIIG 225 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~--~~~~~~~~~~~fGDgAaA~vl~ 225 (395)
+.++.+|+|++.||.+|.++|++|.++.+|++++|.++.. ...+.. ...+....++++||||+|+||+
T Consensus 171 ~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGagavVL~ 250 (915)
T 2qo3_A 171 ISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTLVLLE 250 (915)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEEEEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCceEEEEEe
Confidence 8999999999999999999999999999999999986531 111110 0012223588999999999998
Q ss_pred cCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EE
Q 016111 226 ANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FW 301 (395)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 301 (395)
+.+. .+ ......+.+.+....+.+.. ...+ ......++++++|+++|+++ +|| ++
T Consensus 251 ~~~~A~~~g--~~i~a~I~G~~~~~dg~~~~----------------~~~p--~~~~~~~~i~~Al~~Agl~p-~dId~v 309 (915)
T 2qo3_A 251 RLSEARRNG--HEVLAVVRGSALNQDGASNG----------------LSAP--SGPAQRRVIRQALESCGLEP-GDVDAV 309 (915)
T ss_dssp EHHHHHHTT--CCCCEEEEEEEEEECCSCSS----------------TTCC--CHHHHHHHHHHHHHHTTCCG-GGCCEE
T ss_pred EhHHhhhCC--CCeEEEEEEEEEecCCCccC----------------CCCC--CHHHHHHHHHHHHHHcCCCH-HHCcEE
Confidence 7532 11 11223444333211110000 0000 02345678999999999998 999 99
Q ss_pred EEcCCChHH-----HHHHHHHcCCCcc---chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc------------
Q 016111 302 IVQPGGPAI-----VNQIEAKLGLKQQ---KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT------------ 361 (395)
Q Consensus 302 i~hq~~~~~-----~~~i~~~lgi~~e---~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~------------ 361 (395)
..|..+..+ ...+.+.++.... .+..+ .....+||+.+|+-+..|...+.. .+++.+.
T Consensus 310 e~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~~l~-L~~~~ipp~~~~~~~~p~~ 387 (915)
T 2qo3_A 310 EAHGTGTALGDPIEANALLDTYGRDRDADRPLWLG-SVKSNIGHTQAAAGVTGLLKVVLA-LRNGELPATLHVEEPTPHV 387 (915)
T ss_dssp ECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCCSSCSSBCTTS
T ss_pred EecCCCCccCCHHHHHHHHHHhccccCCCCccccc-CcccceeCCccccchHHHHHHHHH-HhcCCCCCCCCCCCCCccc
Confidence 999875433 4456677876432 22221 146789999999988887765542 1113221
Q ss_pred -----------------CCCCCceEEEEEEccchhhhheeeeecC
Q 016111 362 -----------------TGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 362 -----------------~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.+.+..+.++-+||.|.+-+.++|+-.+
T Consensus 388 ~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 388 DWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp CCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred ccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 0111257889999999999999998653
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-15 Score=164.92 Aligned_cols=263 Identities=14% Similarity=0.140 Sum_probs=176.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC-CCC--------------C-----CHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG-VDM--------------P-----GADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~-~~~--------------p-----~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+|+.+||+++|+++++||. |++++++. |.. + ..+.+|+..||+...
T Consensus 115 p~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gp--- 191 (917)
T 2hg4_A 115 PQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGP--- 191 (917)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCSC---
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCCC---
Confidence 45789999999999999999999984 77777765 321 1 357899999999873
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c-----CCCCCC--CchhhhhhhhhccccEEEEE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----F-----RGPSDA--NLGCLAGQALFGDGAAALII 224 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~-----~~~~~~--~~~~~~~~~~fGDgAaA~vl 224 (395)
.+.++.+|+|++.||.+|.+.|++|.++.+|++++|.++.. | ..|+.. ..+....++++||||+|+||
T Consensus 192 s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL 271 (917)
T 2hg4_A 192 AMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVL 271 (917)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEE
T ss_pred eEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEE
Confidence 68899999999999999999999999999999999986531 1 011100 01123458899999999999
Q ss_pred ecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-E
Q 016111 225 GANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-F 300 (395)
Q Consensus 225 ~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~ 300 (395)
++.+. .+ ......+.+.+......+.. . . .+. .....++++++|+++|+++ +|| +
T Consensus 272 ~~l~~A~~~g--~~i~a~I~G~~~~~dg~~~~-~---~---------~P~-----~~~q~~ai~~Al~~Agl~p-~dId~ 330 (917)
T 2hg4_A 272 QRLSAARREG--RPVLAVLRGSAVNQDGASNG-L---T---------APS-----GPAQQRVIRRALENAGVRA-GDVDY 330 (917)
T ss_dssp EEHHHHHHTT--CCCCEEEEEEEEEECCSCSS-S---S---------CCC-----HHHHHHHHHHHHHHHTCCG-GGCCE
T ss_pred eeHHHHHhCC--CCeEEEEEEEEEecCCCccC-C---C---------CCC-----HHHHHHHHHHHHHHcCCCH-HHCCE
Confidence 87532 11 11233444433211110000 0 0 011 2345678999999999997 999 9
Q ss_pred EEEcCCChHH-----HHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-----------
Q 016111 301 WIVQPGGPAI-----VNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT----------- 361 (395)
Q Consensus 301 ~i~hq~~~~~-----~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~----------- 361 (395)
+..|..+..+ .+.+.+.+|... ..+..+ ..-..+||+.+|+-+..|..++.. .+++.+-
T Consensus 331 veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~vl~-L~~~~ipp~~~~~~~~p~ 408 (917)
T 2hg4_A 331 VEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIG-SVKSNIGHTQAAAGVAGVMKAVLA-LRHGEMPRTLHFDEPSPQ 408 (917)
T ss_dssp EECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEE-CTHHHHCBCGGGTTHHHHHHHHHH-HHHTEECCCTTCCSBCTT
T ss_pred EeeccCCCccCcHHHHHHHHHHhccccCCCCceecc-CcccceecchhhhHHHHHHHHHHH-HhcCCcCCCCCCCCCCcc
Confidence 9999987654 345556676532 122211 146779999999888777765442 1112210
Q ss_pred ------------------CCCCCceEEEEEEccchhhhheeeeecC
Q 016111 362 ------------------TGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 362 ------------------~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.+.+..+.++.+||.|.+-+.++|+-.+
T Consensus 409 i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 409 IEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp SCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 0111257888999999999999998654
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.3e-14 Score=153.03 Aligned_cols=263 Identities=13% Similarity=0.096 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------CCCCHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------DMPGADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------~~p~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+++.+||+++|+++++|| .|++++.+. | ..+..+.+|+..||++..
T Consensus 79 p~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GP--- 155 (965)
T 3hhd_A 79 PQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGP--- 155 (965)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSC---
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCCC---
Confidence 3567999999999999999999999 788887654 3 123478999999999873
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCC--CCchhhhhhhhhccccEEEEE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPSD--ANLGCLAGQALFGDGAAALII 224 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~--~~~~~~~~~~~fGDgAaA~vl 224 (395)
.+.++.+|+|++.||.+|.+.|++|.++.+|+.++|.++.. +..|.. ...+....++++||||+++||
T Consensus 156 s~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL 235 (965)
T 3hhd_A 156 SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLL 235 (965)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEE
T ss_pred eeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEE
Confidence 78999999999999999999999999999999999986520 111110 011223358899999999999
Q ss_pred ecCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEE
Q 016111 225 GANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIV 303 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~ 303 (395)
.+.+... +....+.+.+..........+. .++ .....++++++|+++|+++ +|| ++-.
T Consensus 236 ~~l~~A~---~i~a~I~g~~~n~dg~~~~~~t---~P~--------------~~~q~~~i~~Al~~Agl~p-~dIdyvEa 294 (965)
T 3hhd_A 236 TKKSLAR---RVYATILNAGTNTDGFKEQGVT---FPS--------------GDIQEQLIRSLYQSAGVAP-ESFEYIEA 294 (965)
T ss_dssp EEGGGCS---SCSEEEEEEEEEECCCCTTCTT---SCC--------------HHHHHHHHHHHHHHTTCCG-GGEEEEEC
T ss_pred ecHHHcC---cccEEEEeeeccCCCCCCCCCc---CCC--------------HHHHHHHHHHHHHHhCCCH-HHhccccc
Confidence 9865421 1233444433211110000000 000 1234578999999999998 999 8999
Q ss_pred cCCChHH-----HHHHHHHcCCCcc-chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC---------CC----
Q 016111 304 QPGGPAI-----VNQIEAKLGLKQQ-KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---------GE---- 364 (395)
Q Consensus 304 hq~~~~~-----~~~i~~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---------G~---- 364 (395)
|-.+... .+.+.+.++-..+ .++.+ .+-..+||+.+|+-...|-..+.. .+++.+-| .-
T Consensus 295 HgTgT~~gD~~E~~Al~~~f~~~~~~~~~vg-s~Ks~iGH~~~AaG~~~lik~~l~-l~~~~ipp~~~~~~~np~i~~~~ 372 (965)
T 3hhd_A 295 HGTGTKVGDPQELNGITRALCATRQEPLLIG-STKSNMGHPEPASGLAALAKVLLS-LEHGLWAPNLHFHSPNPEIPALL 372 (965)
T ss_dssp CCCCCTTHHHHHHHHHHHHHCSSCSSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCCSSCCSBCTTCHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCceeee-ccccccccchhhhhHHHHHHHHHH-HhcCCcCCccCCCCCCccCcccc
Confidence 9766543 3445566664322 22221 134667999999988777665432 11132211 00
Q ss_pred -------------CCceEEEEEEccchhhhheeeeecC
Q 016111 365 -------------GLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 365 -------------~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+..++++-+||.|.+-+.++|+-.+
T Consensus 373 ~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 373 DGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp HTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred cCceeecCCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 0035788999999999999998553
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=132.65 Aligned_cols=263 Identities=16% Similarity=0.124 Sum_probs=167.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-------------CCCCCHHHHHHHHcCCCCccccceecCccchhH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-------------VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIG 167 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-------------~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~ 167 (395)
++.+|+.+|++.+|+++|+++++||.+|.+.... ...+.....++..||++..+ +..++.+|+++
T Consensus 41 s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~--~~~~~~~caSg 118 (520)
T 4egv_A 41 SSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAH--AVLEVIGGQSP 118 (520)
T ss_dssp CHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSE--EEECCSSTTHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCce--EEEecCCCHHH
Confidence 3789999999999999999999988766443221 12345778999999999764 67789999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccc--cCC---------------------------------------------
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGT--FRG--------------------------------------------- 200 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~--~~~--------------------------------------------- 200 (395)
+.++..|.+.|++|.++.||++++|.+|.. +..
T Consensus 119 ~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~ 198 (520)
T 4egv_A 119 QHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLL 198 (520)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHHH
Confidence 999999999999999999999999998631 000
Q ss_pred ---------------------------------CCC-----CCch-----------------hhhhhhhhccccEEEEEe
Q 016111 201 ---------------------------------PSD-----ANLG-----------------CLAGQALFGDGAAALIIG 225 (395)
Q Consensus 201 ---------------------------------~~~-----~~~~-----------------~~~~~~~fGDgAaA~vl~ 225 (395)
|.. .+.+ ....++-.+|||+|+||.
T Consensus 199 ~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~ 278 (520)
T 4egv_A 199 ENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMM 278 (520)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEE
T ss_pred HHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEe
Confidence 000 0000 001234568999999998
Q ss_pred cCCCC-CCCCCCceEEEeeeee-ecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE
Q 016111 226 ANPDT-TLSEKPLFQIVSGAQT-ILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI 302 (395)
Q Consensus 226 ~~~~~-~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 302 (395)
+.+.- ..+..+.-.+...+.. ..|.. + +. .+ .+. .......+++++|+++|+++ +|| +|=
T Consensus 279 S~e~A~~lGl~p~a~I~~~a~a~~~~~~---~-~~-~~---------~~~--~~~~~~~a~~~al~~agl~~-~did~~E 341 (520)
T 4egv_A 279 SVESARKLGVPEEKWVYLRGHADMKEPK---L-LE-RA---------DIG--ASPASVTAVNEALRVAGIGL-DDVAAFD 341 (520)
T ss_dssp EHHHHHHHTCCGGGCEEEEEEEEEECCC---G-GG-CS---------CTT--CCHHHHHHHHHHHHHHTCCG-GGEEEEE
T ss_pred eHHHHHHcCCCCceEEEEEEEeccCCcc---c-cc-cc---------ccc--cChHHHHHHHHHHHHhCCCH-HHCCEEE
Confidence 75431 0001122223222111 01110 0 00 00 000 01123457889999999997 999 888
Q ss_pred EcCCChHHHHHHHHHcCCCcc---chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 303 VQPGGPAIVNQIEAKLGLKQQ---KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 303 ~hq~~~~~~~~i~~~lgi~~e---~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
+|-.-........+.||++.+ ++..+ .-+..+||..+++-...+.++..+.. + ..| .+.|..+.| |+-
T Consensus 342 ~~dAF~~~~l~~~~~lG~~~~~~~~~n~~-Gg~~~~Ghp~~a~g~~~~~~~v~~lr-~---~~~---~~~L~~~~g-g~~ 412 (520)
T 4egv_A 342 LYSCFPFPVFNICDGTGLATDDPRGLTLT-GGLPFFGGLGNNYSMHGIAEAVNEMR-D---KPG---QFALVGANG-GIA 412 (520)
T ss_dssp ECCSSSHHHHHHHHHHCCCTTCTTCSCSS-CCHHHHCSCSSSHHHHHHHHHHHHHH-H---STT---CEEEEEEEE-TTT
T ss_pred EeCCcHHHHHHHHHHhCCCCCCCCCcCCC-cccccCCChHHHHHHHHHHHHHHHHh-c---CCC---CceEEeCCC-Cee
Confidence 998776677778899999543 34321 13566999999998888888777511 1 234 566665544 566
Q ss_pred hhheeeeecCCC
Q 016111 380 VDTVVLRSFPFP 391 (395)
Q Consensus 380 ~~a~ll~~~~~~ 391 (395)
|....+.+..-|
T Consensus 413 ~~~~~~~l~~~~ 424 (520)
T 4egv_A 413 SKYSVGIYSTEP 424 (520)
T ss_dssp TEEEEEEEESSC
T ss_pred eeeeEEEEcCCC
Confidence 665655555433
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-12 Score=149.72 Aligned_cols=273 Identities=12% Similarity=0.038 Sum_probs=170.2
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcC--------EEEEEecCC-C-----------------------CC-CCHHHHHHH
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQIT--------HLIFCSLVG-V-----------------------DM-PGADYQLTK 146 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id--------~vi~~s~t~-~-----------------------~~-p~~a~~l~~ 146 (395)
.....|+.+|+.+||+++|+++++|+ .|+++++.+ + .. ...+.++..
T Consensus 2645 Dp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~ 2724 (3089)
T 3zen_D 2645 DRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQ 2724 (3089)
T ss_dssp CHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHH
Confidence 35688999999999999999998885 577776532 0 11 224566665
Q ss_pred -HcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c----------CCCCCC-
Q 016111 147 -MLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------F----------RGPSDA- 204 (395)
Q Consensus 147 -~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~----------~~~~~~- 204 (395)
.+|+... ++.++.+|+|++.||.+|.++|++|.++.+|++++|.++.. + .+|...
T Consensus 2725 ~~lGl~GP---s~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~c 2801 (3089)
T 3zen_D 2725 SYVGGYGA---MVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFS 2801 (3089)
T ss_dssp HTTCCCSC---EECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSC
T ss_pred HHcCCCCC---ceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCccccc
Confidence 4699763 78999999999999999999999999999999999986520 0 001100
Q ss_pred -CchhhhhhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHH
Q 016111 205 -NLGCLAGQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENI 280 (395)
Q Consensus 205 -~~~~~~~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 280 (395)
..+....++++||||+++||.+.+. .+ ......+........+.... +... +...+..+....
T Consensus 2802 rpFd~~~dG~v~GEGAgavVL~~~e~A~~~G--~~I~avI~g~~~n~Dg~~~~-----~~aP------~~g~~~a~~~~q 2868 (3089)
T 3zen_D 2802 RANDRRRLGFLEAQGGGTILLARGDLALKMG--LPVLAVVGYAQSFADGVHTS-----IPAP------GLGALGAARGGR 2868 (3089)
T ss_dssp CSSBTTCCCBCBBCEEEEEEEEEHHHHHHHT--CCCCEEEEEEEEECCCCCCC-----SSCC------CCGGGGGSTTGG
T ss_pred CccccCCCCEEEeccceEEEEeeHHHHHhCC--CceEEEEEEEEEecCCcccC-----ccCC------chhHHhHhhhhH
Confidence 0111234788999999999987542 11 11122222211111111000 0000 011111101122
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHH--------HHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVN--------QIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~--------~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
.++++++|+++|+++ +|| ++-.|-.+..+-+ .+.+.+|... .++..+ ..-..+||+.+|+-...|..+
T Consensus 2869 ~~ai~~AL~~AGl~p-~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~-s~Ks~iGH~~gAAG~~~lik~ 2946 (3089)
T 3zen_D 2869 ESTLARSLAQLGVGA-DDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIV-SQKTLTGHAKGGAAVFQMMGL 2946 (3089)
T ss_dssp GSHHHHHHHTTTCCG-GGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEE-CSHHHHCBCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCH-HHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceec-ccccccCCchhhhhHHHHHHH
Confidence 357889999999997 999 8999987765332 4566788764 333221 145678999999977666554
Q ss_pred HHhhhhcCCccC----------------------------CCCCceEEEEEEccchhhhheeeeecCCC
Q 016111 351 RRKSAEEGKVTT----------------------------GEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391 (395)
Q Consensus 351 ~~~~~~~g~i~~----------------------------G~~~d~vll~~~G~G~s~~a~ll~~~~~~ 391 (395)
+.. .+++.+-| ..+..++++.+||.|.+-+.++|+-.+..
T Consensus 2947 ll~-L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2947 CQI-LRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp HHH-HHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred HHH-HhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 432 11133211 00124688899999999889998876543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1e-08 Score=120.64 Aligned_cols=262 Identities=13% Similarity=0.080 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C--------------CC----C-CHHHHHHHHcCCCCccccc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V--------------DM----P-GADYQLTKMLGLNPSVKRV 157 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~--------------~~----p-~~a~~l~~~Lgl~~~~~~~ 157 (395)
...|+.+++.+||+++|+++++++ .|++++++. | .. + ..+.+|...+|+... .
T Consensus 78 q~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gp---s 154 (2512)
T 2vz8_A 78 QLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGP---S 154 (2512)
T ss_dssp HHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSC---E
T ss_pred HHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCC---c
Confidence 457899999999999999876553 566666543 2 00 1 257899999999986 6
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCCCCCC--CchhhhhhhhhccccEEEEEe
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------TFRGPSDA--NLGCLAGQALFGDGAAALIIG 225 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~~~~~--~~~~~~~~~~fGDgAaA~vl~ 225 (395)
+.+..+|+|.+.||++|.+.|++|.++.+|+.+++.... .+..|+.. ..+....++..|+|++++||+
T Consensus 155 ~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vLk 234 (2512)
T 2vz8_A 155 ITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLT 234 (2512)
T ss_dssp EEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEEE
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEEE
Confidence 889999999999999999999999999999999997431 01112100 011223589999999999999
Q ss_pred cCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc
Q 016111 226 ANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ 304 (395)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h 304 (395)
+-.... +....+.+.+..........+. .++ .....++|+++|+++|+++ +|| |+-.|
T Consensus 235 ~l~~A~---~i~a~i~g~~~n~dg~~~~~~t---~P~--------------~~~q~~~i~~al~~ag~~p-~~i~yveaH 293 (2512)
T 2vz8_A 235 KKSLAR---RVYATILNAGTNTDGSKEQGVT---FPS--------------GDVQEQLIRSLYAPAGPDP-ESLEYIEAH 293 (2512)
T ss_dssp EGGGCS---CCSEEEEEEEEEECCCCTTCSS---SCC--------------HHHHHHHHHTTSGGGSSCT-TSCCEEECC
T ss_pred EHHHCC---cccEEEEEEEEcCCCCCCCCCC---CCC--------------HHHHHHHHHHHHHHcCCCH-HHCCEEEee
Confidence 865431 1233444333211100000000 011 2234578999999999998 999 99999
Q ss_pred CCChHHH-----HHHHHHcCCCcc-chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC---------CC-----
Q 016111 305 PGGPAIV-----NQIEAKLGLKQQ-KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---------GE----- 364 (395)
Q Consensus 305 q~~~~~~-----~~i~~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---------G~----- 364 (395)
-.+...- +.+.+.+|-... .++.+ .+-..+||+-+|+-...|-..+-. .++|.+-| .-
T Consensus 294 GTgT~~gD~~E~~al~~~f~~~~~~~~~ig-S~Ks~iGH~~~AaG~~~~ik~~l~-l~~~~ipp~~~~~~~~p~~~~~~~ 371 (2512)
T 2vz8_A 294 GTGTKVGDPQELNGIVNALCATRREPLLIG-STKSNMGHPEPASGVAALIKVLLS-LEHGVWAPNLHYHTPNPEIPALQD 371 (2512)
T ss_dssp CCCCTTHHHHHHHHHHHHHCSCSSSCCEEE-CHHHHHCBCGGGHHHHHHHHHHHH-HTTTBCCCCSSCCSCCTTSSSSSS
T ss_pred cCCCCCCCHHHHHHHHHHhcccCCCCceee-cccccccccccccchhHHHHHHHH-HHCCCcCCCCCCCCCCcccccccc
Confidence 8776543 445667764322 22221 146788999999988888765432 11232211 00
Q ss_pred ------------CCceEEEEEEccchhhhheeeeecC
Q 016111 365 ------------GLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 365 ------------~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+..++++-+||.|.+-+.++|+-.+
T Consensus 372 ~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 372 GRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp SSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CceEecCCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 0136788999999999999998544
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.8e-09 Score=118.16 Aligned_cols=124 Identities=11% Similarity=0.057 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHhCCC-CCCc----C----EEEEEecCC-CC-----------------------CC-CHHHHHHH-
Q 016111 102 VPKLGEEAATKAIKEWGQS-KSQI----T----HLIFCSLVG-VD-----------------------MP-GADYQLTK- 146 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~-~~~I----d----~vi~~s~t~-~~-----------------------~p-~~a~~l~~- 146 (395)
...|+.+|+.+||+++|++ |.++ + .+++++..+ +. .+ ..+.++..
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 4679999999999999997 5442 1 455554432 10 12 24567777
Q ss_pred HcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----cC----------------CCCCCC-
Q 016111 147 MLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----FR----------------GPSDAN- 205 (395)
Q Consensus 147 ~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----~~----------------~~~~~~- 205 (395)
.||+... .+.+..+|++++.||.+|...|++|.++.+||.++|.++.. |. +|....
T Consensus 1092 ~LGl~GP---s~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cR 1168 (1688)
T 2pff_A 1092 LISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1168 (1688)
T ss_dssp SCCCCCC---CCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCC
T ss_pred HcCCcCC---eEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccC
Confidence 6899863 68899999999999999999999999999999999986531 00 011100
Q ss_pred -chhhhhhhhhccccEEEEEecCC
Q 016111 206 -LGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 206 -~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
......++++||||+++||.+..
T Consensus 1169 PFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1169 PATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp SSSSSCCCCCCCSCCEEEEEECSH
T ss_pred cCccCCCCCccccceEEEEeCcHH
Confidence 01122478999999999999754
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=9.7e-07 Score=99.59 Aligned_cols=124 Identities=12% Similarity=0.038 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHhCCC-CCC----cC----EEEEEecCC--------------------CCCC-----CHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQS-KSQ----IT----HLIFCSLVG--------------------VDMP-----GADYQLTKM 147 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~-~~~----Id----~vi~~s~t~--------------------~~~p-----~~a~~l~~~ 147 (395)
...|+..++.+||+++|++ |.+ |+ .+++++..+ +..+ ..+.+|...
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4569999999999999998 665 33 566665532 1111 246788884
Q ss_pred -cCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cC----------CCCCCCc
Q 016111 148 -LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FR----------GPSDANL 206 (395)
Q Consensus 148 -Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~----------~~~~~~~ 206 (395)
||+... ...+..+|++++.||.+|...|++|.++.+||.++|.++.. .. +|....+
T Consensus 1266 ~lg~~GP---~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~R 1342 (1878)
T 2uv9_A 1266 LLSSTGP---IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSR 1342 (1878)
T ss_dssp TCCCCCC---BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCC
T ss_pred hcCCCCC---eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcC
Confidence 999874 67899999999999999999999999999999999986520 11 0211110
Q ss_pred --hhhhhhhhhccccEEEEEecCC
Q 016111 207 --GCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 207 --~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
.....+++.||||+++||.+..
T Consensus 1343 Pfd~~r~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A 1343 PTSTTRNGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp SSBTTCCCBCBBCEEEEEEEEEHH
T ss_pred CCccCCCCCcccceeEEEEEeeHH
Confidence 1123478999999999998753
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-06 Score=99.58 Aligned_cols=125 Identities=10% Similarity=0.034 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHHhCCC-CCC----cC----EEEEEecCC-C-----------------------CCC-CHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQS-KSQ----IT----HLIFCSLVG-V-----------------------DMP-GADYQLTK 146 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~-~~~----Id----~vi~~s~t~-~-----------------------~~p-~~a~~l~~ 146 (395)
....|+..++.+||+++|++ |.+ |+ .+++++..+ + ..+ ..+.+|..
T Consensus 1210 p~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~ 1289 (1887)
T 2uv8_A 1210 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1289 (1887)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHH
Confidence 45679999999999999994 766 32 566665532 0 012 35677888
Q ss_pred H-cCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cC----------CCCCCC
Q 016111 147 M-LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FR----------GPSDAN 205 (395)
Q Consensus 147 ~-Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~----------~~~~~~ 205 (395)
. ||+... .+.+..+|++++.||.+|...|++|.++.+||.++|.++.. .. +|....
T Consensus 1290 ~~lgl~GP---~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~ 1366 (1887)
T 2uv8_A 1290 LLISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1366 (1887)
T ss_dssp HTTCCCSC---CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSC
T ss_pred HHcCCccc---eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhcccCCCccCc
Confidence 4 999874 68899999999999999999999999999999999985420 00 011000
Q ss_pred --chhhhhhhhhccccEEEEEecCC
Q 016111 206 --LGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 206 --~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
......+++.||||+++||.+..
T Consensus 1367 RPfd~~r~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A 1367 RPATTTRNGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHH
T ss_pred CCCcccCCCcccccceEEEEEccHH
Confidence 01112478899999999998753
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=94.01 E-value=0.12 Score=48.90 Aligned_cols=90 Identities=19% Similarity=0.166 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceec-Cc--------cchhH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK------RVMLY-FQ--------GCYIG 167 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~------~~~~i-~~--------~C~~~ 167 (395)
...|++++++.|+++|++|+|+|+|+-.-.. ..--.+...+..++|++..-. ..|+- ++ ||++.
T Consensus 206 aPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~-q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 206 APAAADTIKQHLEDLGRTPDDYDLILTGDLS-GVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEESCH-HHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHcCEEecCChH-HHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 4456677799999999999999999953211 111134577888889874321 01121 23 66666
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeecc
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLS 194 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~ 194 (395)
+..=.+-.+ |+.|..++||+|+.-..
T Consensus 285 v~~~~~~~~-~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 285 VTFAHIFKE-IEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHTHHHH-HHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHH-HhcCcccEEEEEecccc
Confidence 655555555 67788999999987764
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.60 E-value=0.3 Score=45.90 Aligned_cols=81 Identities=20% Similarity=0.131 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++.... .+..-..++++||++..-. ...+ |.++++...+|..+
T Consensus 232 ~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~-~~~l~~~GNt~sasi~~~L~~~--- 303 (333)
T 4dfe_A 232 AVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERM-IVTVGEHGNTSAASIPLALDVA--- 303 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHh-hhhHHhcCchHHHHHHHHHHHH---
Confidence 4456678899999999999999999875332 1234578899999986531 1222 44556666666443
Q ss_pred HHcC---CCCeEEEEE
Q 016111 178 AENN---PGARVLVVC 190 (395)
Q Consensus 178 l~~g---~~~~vLvv~ 190 (395)
++.| +.+++|+++
T Consensus 304 ~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 304 VRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHTTCSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 356777776
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=92.49 E-value=0.45 Score=44.96 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ 176 (395)
.......++++++|+++|++++|||.++.-.. .+..-..++++||++..-. ...+ |.++++...+|..+..
T Consensus 243 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~ 317 (345)
T 3s21_A 243 EGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV----SRPHTAAFVKSFGIDPAKV-MTIFGEHGNIGPASVPIVLSKLKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCcCHHHc-eeeHhhcCchHHHHHHHHHHHHHH
Confidence 34456668889999999999999999986332 1224578899999986531 1111 4566666666655433
Q ss_pred HHHcCCCCeEEEEEe
Q 016111 177 FAENNPGARVLVVCS 191 (395)
Q Consensus 177 ll~~g~~~~vLvv~~ 191 (395)
-=+-.+.+++|+++.
T Consensus 318 ~g~~~~Gd~vll~~~ 332 (345)
T 3s21_A 318 LGRLKKGDRIALLGI 332 (345)
T ss_dssp HTCCCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 201123577887774
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=0.47 Score=45.19 Aligned_cols=82 Identities=16% Similarity=0.088 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++.... ....-..++++||++..-. ...+ |.++++...+|..+..-
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sAsi~l~L~~~~~~ 326 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQP----NLRILDAVQEQLGIPQHKF-AVTVDRLGNMASASTPVTLAMFWPD 326 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCcCHHHh-hhhhhcccchHHHHHHHHHHHHHHh
Confidence 4455668899999999999999999875332 2234578899999987531 1221 45667777777655433
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
+ .+.+++|+++
T Consensus 327 l--~~Gd~vll~~ 337 (359)
T 3h78_A 327 I--QPGQRVLVLT 337 (359)
T ss_dssp S--CTTCEEEEEE
T ss_pred C--CCCCEEEEEE
Confidence 2 3457888776
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=91.81 E-value=0.61 Score=43.68 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++.-.. .+..-..++++||++..-. ...+ |.++++...+|..+
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~--- 293 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMSQV-VVTLDKYANNSAATVPVALDEA--- 293 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHHHh-hccHhhcCchHHHHHHHHHHHH---
Confidence 4455668899999999999999999885332 2234578899999987531 2222 44556666666443
Q ss_pred HHcC---CCCeEEEEEe
Q 016111 178 AENN---PGARVLVVCS 191 (395)
Q Consensus 178 l~~g---~~~~vLvv~~ 191 (395)
++.| +.+++|+++.
T Consensus 294 ~~~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 294 IRDGRIQRGQLLLLEAF 310 (323)
T ss_dssp HHTTSSCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3577887763
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=91.71 E-value=0.54 Score=43.65 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----c-CccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML----Y-FQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~----i-~~~C~~~~~aL~~A~~ 176 (395)
...-..++++++|+++|++++|||+++.- .+. ......+.+.||++... ... + +..+++...+|..+
T Consensus 216 ~~~~~~~~i~~aL~~agl~~~did~v~~H-~~~---~~~~d~i~~~lg~~~~~--~~~~~~~~Gn~~~As~~~~L~~~-- 287 (317)
T 1hnj_A 216 AVTELAHIVDETLAANNLDRSQLDWLVPH-QAN---LRIISATAKKLGMSMDN--VVVTLDRHGNTSAASVPCALDEA-- 287 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEC-CSC---HHHHHHHHHHTTCCGGG--BCCCHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEc-CCC---HHHHHHHHHHcCCCHHH--hHhhHhhhCcHHHHHHHHHHHHH--
Confidence 34456788999999999999999998753 322 11234688899987542 221 1 45566666666433
Q ss_pred HHHcC---CCCeEEEEEee
Q 016111 177 FAENN---PGARVLVVCSD 192 (395)
Q Consensus 177 ll~~g---~~~~vLvv~~d 192 (395)
++.+ +.+++|+++.-
T Consensus 288 -~~~~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 288 -VRDGRIKPGQLVLLEAFG 305 (317)
T ss_dssp -HHTTCSCTTCEEEEEEEE
T ss_pred -HHhCCCCCCCEEEEEEEc
Confidence 4444 35788887643
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=91.68 E-value=0.54 Score=44.05 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee-c-CccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VML-Y-FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~-i-~~~C~~~~~aL~~A~~ll 178 (395)
......++++++|+++|++++|||+++... +. ...-..+.+.||++..-.+ .+. + +.++++...+|.. ++
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~-~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~---~~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQ-AN---TRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAH---GL 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC-CC---HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHH---HH
Confidence 345667889999999999999999988632 22 1123468899999754211 111 1 4455666666643 34
Q ss_pred HcC---CCCeEEEEE
Q 016111 179 ENN---PGARVLVVC 190 (395)
Q Consensus 179 ~~g---~~~~vLvv~ 190 (395)
+.+ +.+++|+++
T Consensus 295 ~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 295 RQGILRDGGNMVLTG 309 (331)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 346777766
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=91.52 E-value=0.6 Score=43.20 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee-c-CccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VML-Y-FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~-i-~~~C~~~~~aL~~A~~ll 178 (395)
...-..++++++|+++|++++|||+++...... .....+.+.||++....+ ... + +.++++.+.+|..+ +
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQANI----RIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---L 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---H
Confidence 344667789999999999999999988533221 123457888998754211 111 1 44556666665433 4
Q ss_pred HcC---CCCeEEEEE
Q 016111 179 ENN---PGARVLVVC 190 (395)
Q Consensus 179 ~~g---~~~~vLvv~ 190 (395)
+.+ +.+++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 444 346777665
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.49 Score=44.93 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----cCccchhHHHHHHHHH--
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML----YFQGCYIGATAIRMAK-- 175 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~----i~~~C~~~~~aL~~A~-- 175 (395)
......++++++|+++|++++|||.++..... ...-..++++||++..-. ... -|.++++...+|..+.
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~----~~i~~~~~~~Lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~~ 316 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQAN----LFMLKHLAKKAGLPAERV-PVNIGEYGNTSCASIPLLITTELKD 316 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCC----HHHHHHHHHHTTCCGGGS-CCCHHHHCBCGGGHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHhCcCHHHH-HHHHhhhCcHHHHHHHHHHHHHHHh
Confidence 45566788999999999999999999863322 224578899999986531 111 1567777777776553
Q ss_pred HHHHcCCCCeEEEEE
Q 016111 176 DFAENNPGARVLVVC 190 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~ 190 (395)
..++.| +++|+++
T Consensus 317 g~~~~G--d~vll~~ 329 (354)
T 4efi_A 317 RLKEET--LQLGMFG 329 (354)
T ss_dssp HHHHSC--EEEEEEE
T ss_pred CCCCCC--CEEEEEE
Confidence 344443 6788777
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=91.28 E-value=0.62 Score=43.75 Aligned_cols=81 Identities=15% Similarity=0.035 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc-ccc-cee-c-CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS-VKR-VML-Y-FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~-~~~-~~~-i-~~~C~~~~~aL~~A~~ll 178 (395)
..-..++++++|+++|++++|||+++... +. ...-..+.+.||++.. ... .+. + +.++++...+|.. ++
T Consensus 230 ~~~~~~~i~~aL~~agl~~~did~v~~H~-~~---~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~---~~ 302 (339)
T 1mzj_A 230 VADVVPAAREALEVAGLTVGDLVAFVPHQ-AN---LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR---LV 302 (339)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEECC-SC---HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC-CC---HHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHH---HH
Confidence 45667889999999999999999987533 22 1122468899999765 210 111 1 4455555555543 34
Q ss_pred HcC---CCCeEEEEE
Q 016111 179 ENN---PGARVLVVC 190 (395)
Q Consensus 179 ~~g---~~~~vLvv~ 190 (395)
+.+ +.+++|+++
T Consensus 303 ~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 303 RSGAVPGGGPALMIG 317 (339)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 444 346777765
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=91.08 E-value=0.68 Score=42.66 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++... +. ......+.+.||++.... .... +..+++.+.+|..+
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~-~~---~~~~~~~~~~lg~~~~~~-~~~~~~~Gh~~~As~~~~L~~~--- 279 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQ-AN---VRIINALAEKLNIPKEKV-FVNIQKYGNTSAASIPIALHEA--- 279 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC-SC---HHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHhCCCHHHh-hhhHhhhcchHHHHHHHHHHHH---
Confidence 344667899999999999999999887533 22 112245788999875421 1111 44556666655433
Q ss_pred HHcC---CCCeEEEEEe
Q 016111 178 AENN---PGARVLVVCS 191 (395)
Q Consensus 178 l~~g---~~~~vLvv~~ 191 (395)
++.+ +.+++|+++.
T Consensus 280 ~~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 280 IKEGKVKRGDLILMTAM 296 (309)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3467777663
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=91.07 E-value=0.56 Score=44.30 Aligned_cols=85 Identities=14% Similarity=-0.039 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----cCccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML----YFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~----i~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++.-.. ....-..++++||++..-..... -|.++++...+|..+..-
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~ 322 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQA----NMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEE 322 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEEECCS----CHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEEecCC----CHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHh
Confidence 3455667899999999999999999885322 22344678999999865311111 145666666666544321
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
=+-.+.+++|+++
T Consensus 323 g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 323 NPELSGGLALQIG 335 (350)
T ss_dssp CGGGTTSEEEEEE
T ss_pred CCCCCcCEEEEEE
Confidence 1111357788776
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=91.05 E-value=0.65 Score=44.27 Aligned_cols=82 Identities=13% Similarity=0.053 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.++.-.. -...-..++++||++..-. ...+ |.++++...+|.. +
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~Lgl~~ek~-~~~l~~~GNtssAsipl~L~~---~ 335 (365)
T 3gwa_A 264 SLAEVPRAADRLLALAGEPRENIDCFVLHQA----NRFMLDALRKKMKIPEHKF-PVLMEHCGNTVSSTLPLALET---M 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGS-CCCCTTTCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHH-HHHHhcccchHHHHHHHHHHH---H
Confidence 4455668899999999999999999985332 2234578899999987531 1111 3455555555543 3
Q ss_pred HHcC---CCCeEEEEEe
Q 016111 178 AENN---PGARVLVVCS 191 (395)
Q Consensus 178 l~~g---~~~~vLvv~~ 191 (395)
++.| +.+++|+++.
T Consensus 336 ~~~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 336 RANGTLARGMRLMLLGF 352 (365)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3567887763
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=90.80 E-value=0.71 Score=43.15 Aligned_cols=82 Identities=17% Similarity=0.093 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc-cccceec----CccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS-VKRVMLY----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~-~~~~~~i----~~~C~~~~~aL~~A~~ 176 (395)
......++++++|+++|++++|||+++...+. ......+.+.||++.. .. ...+ +.++++...+|..+
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~----~~~~~~~~~~lg~~~~~~~-~~~~~~~Gnt~sAs~~~~L~~~-- 302 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQAN----SRINELLVKNLQLRPDAVV-ANDIEHTGNTSAASIPLAMAEL-- 302 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSC----HHHHHHHHHHHTCCTTCEE-CCTHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCchhhh-hhhhhhhCcHHHHHHHHHHHHH--
Confidence 34566788999999999999999998854322 1233457889998765 21 1111 44555555555443
Q ss_pred HHHcC---CCCeEEEEEe
Q 016111 177 FAENN---PGARVLVVCS 191 (395)
Q Consensus 177 ll~~g---~~~~vLvv~~ 191 (395)
++.+ +.+++|+++.
T Consensus 303 -~~~~~~~~g~~~l~~~~ 319 (335)
T 1u6e_A 303 -LTTGAAKPGDLALLIGY 319 (335)
T ss_dssp -HHHTSSCTTCEEEEEEE
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 3567777663
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=89.87 E-value=1.1 Score=41.68 Aligned_cols=82 Identities=16% Similarity=0.068 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ceec--CccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VMLY--FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~i--~~~C~~~~~aL~~A~~ll 178 (395)
...-..++++++|+++|++++|||+++... +. ......+.+.||++..... .... +..+++.+.+|.. ++
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~-~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~---~l 290 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQ-AN---LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE---AV 290 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC-SC---HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH---HH
Confidence 345667889999999999999999987533 22 1122457888998754211 1111 3445555555433 34
Q ss_pred HcC---CCCeEEEEE
Q 016111 179 ENN---PGARVLVVC 190 (395)
Q Consensus 179 ~~g---~~~~vLvv~ 190 (395)
+.+ +.+++|+++
T Consensus 291 ~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 291 DAGRIREGDHVLLVS 305 (322)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 245666655
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=89.15 E-value=0.98 Score=43.48 Aligned_cols=79 Identities=15% Similarity=0.069 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee------cCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML------YFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~------i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++.+.. .+......+.+.||+......... ...+|+|....+.+..+|-.
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~ 371 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQK 371 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999998522 222345667888998754211111 11256666666666666655
Q ss_pred cCCCCeEEEE
Q 016111 180 NNPGARVLVV 189 (395)
Q Consensus 180 ~g~~~~vLvv 189 (395)
.+ .++.|+.
T Consensus 372 ~~-~~~gl~~ 380 (395)
T 4e1l_A 372 RK-VETGLAT 380 (395)
T ss_dssp HT-CSEEEEE
T ss_pred cC-CCEEEEE
Confidence 54 4666654
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=87.16 E-value=0.84 Score=44.01 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHc-CC--CCcccccee-----cCccchhHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKML-GL--NPSVKRVML-----YFQGCYIGATAIR 172 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~L-gl--~~~~~~~~~-----i~~~C~~~~~aL~ 172 (395)
.......++++++|+++|++++|||.+|. +.. -+..-..++++| |+ +... +.. -|.++++...+|.
T Consensus 288 ~a~~~~~~~i~~~L~~~gl~~~dId~~v~-Hqa---n~~i~~~~~~~llgl~~~~~k--~~~~l~~~GNtssAsipl~L~ 361 (392)
T 3led_A 288 EVVPLVSEMIIEHAREIGIDPHGLKRMWL-HQA---NINMNEIIGRKVLGRDPTRDE--NVIILDDYANTSSAGSIIAFH 361 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEE-CSS---CHHHHHHHHHHHHTSCCCTTT--BCCCHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEE-cCC---CHHHHHHHHHHhcCCCCCHHH--HHHHHhhhCccHHHHHHHHHH
Confidence 45566778899999999999999998885 321 122445677775 75 3221 221 2456666677776
Q ss_pred HHHHHHHcCCCCeEEEEE
Q 016111 173 MAKDFAENNPGARVLVVC 190 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~ 190 (395)
.+...++ +.+++|+++
T Consensus 362 ~~~~~~~--~Gd~vll~g 377 (392)
T 3led_A 362 KHQDDMA--QGDLGLICS 377 (392)
T ss_dssp HCCTTCC--TTCEEEEEE
T ss_pred HHhCCCC--CCCEEEEEE
Confidence 5433222 346777766
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=86.83 E-value=1.3 Score=42.62 Aligned_cols=82 Identities=11% Similarity=0.029 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc----e-ec-CccchhHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV----M-LY-FQGCYIGATAIRMAK 175 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~----~-~i-~~~C~~~~~aL~~A~ 175 (395)
..+-..++++++|+++|++++|||+++. +.+. ...-..+.++||++..-... . .+ |.++++...+| .
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~-H~~~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~ 357 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAI-HPGG---PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E 357 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEE-CCSC---HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEE-CCCc---HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---H
Confidence 3445667889999999999999998886 3222 12335688899998653110 1 12 23334444444 3
Q ss_pred HHHHcCC----CCeEEEEE
Q 016111 176 DFAENNP----GARVLVVC 190 (395)
Q Consensus 176 ~ll~~g~----~~~vLvv~ 190 (395)
.+++.+. .+++|+++
T Consensus 358 ~~~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 358 TMVQQAESAKAISTGVAFA 376 (393)
T ss_dssp HHHHSCSSSSSSEEEEEEE
T ss_pred HHHhcCccCCCCCeEEEEE
Confidence 4445553 35677766
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=85.95 E-value=1.7 Score=41.74 Aligned_cols=79 Identities=13% Similarity=0.073 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------ecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVM------LYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~------~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++.+.- .+......+.+.||+........ -...+|+|....+.+..+|-.
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~ 369 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKR 369 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998522 12234567788899876421011 011234555555555555544
Q ss_pred cCCCCeEEEE
Q 016111 180 NNPGARVLVV 189 (395)
Q Consensus 180 ~g~~~~vLvv 189 (395)
. ..++.|+.
T Consensus 370 ~-~~~~gl~~ 378 (394)
T 3ss6_A 370 R-GLEKGIAS 378 (394)
T ss_dssp H-TCCEEEEE
T ss_pred c-CCCEEEEE
Confidence 4 35666653
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=84.65 E-value=1.1 Score=42.44 Aligned_cols=82 Identities=24% Similarity=0.251 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-----CccchhHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-----FQGCYIGATAIRMAK 175 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-----~~~C~~~~~aL~~A~ 175 (395)
.......++++++|+++|++++|||.+|+-+...... ..++++||++..-. ...+ |.++++...+|..+
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~----~~~~~~lgl~~ek~-~~~~~~~~GNt~aAsipl~L~~~- 308 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTG----HELHDLLGLPDERT-SWAYGRTTGHVGAGDQYAGLAHL- 308 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSS----CCHHHHHTSCGGGB-THHHHHHHCBCTTCHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHH----HHHHHHcCCCHHHh-HHHhccccccchHhHHHHHHHHH-
Confidence 3456677899999999999999999999634333113 45778899987531 2222 23455556666444
Q ss_pred HHHHcC---CCCeEEEEE
Q 016111 176 DFAENN---PGARVLVVC 190 (395)
Q Consensus 176 ~ll~~g---~~~~vLvv~ 190 (395)
+++| +.+++|+++
T Consensus 309 --~~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 309 --VENALVQPGDRVLLFG 324 (357)
T ss_dssp --HHTTCCCTTCEEEEEC
T ss_pred --HHcCCCCCCCEEEEEE
Confidence 3444 245666655
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=83.74 E-value=1.4 Score=42.04 Aligned_cols=41 Identities=20% Similarity=0.170 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 016111 109 AATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS 153 (395)
Q Consensus 109 Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~ 153 (395)
+++++|+++|++++|||+++.-.... .....+.++||++..
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~~----~i~d~~~~~lgl~~~ 297 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGGP----RILDDLSTFLEVDPH 297 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSHH----HHHHHHHHHSCSCGG
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHH
Confidence 89999999999999999988643221 123468889999865
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=83.41 E-value=2.8 Score=40.15 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc------eecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV------MLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~------~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++-..- .+...+-.+.+.||+....... +-.-.|++|....+..+.+|-.
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 367 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKR 367 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhc
Confidence 36799999999999999999988521 1222233467889987532100 1112345555555555555544
Q ss_pred cCCCCeEEE
Q 016111 180 NNPGARVLV 188 (395)
Q Consensus 180 ~g~~~~vLv 188 (395)
. ..++.|+
T Consensus 368 ~-~~~~gl~ 375 (392)
T 2vu1_A 368 R-GARKGLA 375 (392)
T ss_dssp H-TCSEEEE
T ss_pred c-CCCEEEE
Confidence 3 3566655
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=81.70 E-value=2.2 Score=41.00 Aligned_cols=79 Identities=11% Similarity=0.061 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------ecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVM------LYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~------~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++-+.. ........+.+.||+........ -...+|+|....+.+..+|-.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~ 372 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKR 372 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998522 12234456678889765321011 111245555555566666554
Q ss_pred cCCCCeEEEE
Q 016111 180 NNPGARVLVV 189 (395)
Q Consensus 180 ~g~~~~vLvv 189 (395)
.+ .++.|+.
T Consensus 373 ~~-~~~gl~~ 381 (396)
T 4dd5_A 373 RD-AKTGLAT 381 (396)
T ss_dssp HT-CSEEEEE
T ss_pred cC-CCeEEEE
Confidence 43 5666654
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=81.14 E-value=3 Score=40.23 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc------eecCccchhHHHHHHHHHHHHHc
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV------MLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~------~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..|++++|+++|++++|||++-...+. ........+.||+....... +-.-.|++|....+.+..+|-..
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hdaf----~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~ 383 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEAF----ASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR 383 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSB----HHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeChh----HHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999998863221 12234567889987643100 11123555666666666666544
Q ss_pred CCCCeEEE
Q 016111 181 NPGARVLV 188 (395)
Q Consensus 181 g~~~~vLv 188 (395)
+ .++.|+
T Consensus 384 ~-~~~gl~ 390 (407)
T 3svk_A 384 N-ARRALI 390 (407)
T ss_dssp T-CCEEEE
T ss_pred C-CCEEEE
Confidence 3 455554
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=80.50 E-value=3.3 Score=39.77 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc------eecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV------MLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~------~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++-+.- .+......+.+.||+....... +-.-.|++|....+..+.+|-.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE----AFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER 372 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----ccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhh
Confidence 46899999999999999999988422 1222234577889986432000 1112245555555555555544
Q ss_pred cCCCCeEEEE
Q 016111 180 NNPGARVLVV 189 (395)
Q Consensus 180 ~g~~~~vLvv 189 (395)
. ..++.|+.
T Consensus 373 ~-~~~~gl~~ 381 (397)
T 1wl4_A 373 M-GRSRGVAA 381 (397)
T ss_dssp H-TCCEEEEE
T ss_pred c-CCCEEEEE
Confidence 3 35666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 395 | ||||
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 1e-102 | |
| d1bi5a1 | 235 | c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med | 2e-73 | |
| d1ee0a2 | 160 | c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon | 1e-53 | |
| d1bi5a2 | 154 | c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M | 3e-53 | |
| d1u0ua2 | 156 | c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S | 5e-51 | |
| d1u0ma1 | 200 | c.95.1.2 (A:2-201) Putative polyketide synthase SC | 3e-47 | |
| d1u0ma2 | 148 | c.95.1.2 (A:202-349) Putative polyketide synthase | 6e-32 | |
| d1xpma1 | 166 | c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA | 3e-15 | |
| d1u6ea1 | 184 | c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa | 2e-10 | |
| d1mzja2 | 153 | c.95.1.2 (A:184-336) Priming beta-ketosynthase fro | 3e-08 | |
| d1hnja1 | 174 | c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH | 6e-08 | |
| d1u6ea2 | 148 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 6e-08 | |
| d1mzja1 | 181 | c.95.1.2 (A:3-183) Priming beta-ketosynthase from | 1e-07 | |
| d1ub7a1 | 172 | c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH | 2e-05 | |
| d1hnja2 | 143 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 3e-04 | |
| d1ub7a2 | 149 | c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa | 0.003 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 304 bits (779), Expect = e-102
Identities = 93/372 (25%), Positives = 168/372 (45%), Gaps = 13/372 (3%)
Query: 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTED 75
+A I + T P + Q+D D RV +++ R+ +KS + R V D
Sbjct: 11 VAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTRRMAV--D 65
Query: 76 ILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV 135
L ++ + +++ R + L + + +A+ ++I L+ + G
Sbjct: 66 PLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF 125
Query: 136 DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSL 195
PG D + K LGL+PS+ RV++ F GC A+ A ++ +P + LVVC +L
Sbjct: 126 IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCS 185
Query: 196 GTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV 255
D N + +LFGDG AAL+IGA+ E + S +L ++ +
Sbjct: 186 VNAVFADDIN--DVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 243
Query: 256 AGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIE 315
G+T LS+N+ + + + E G++ + W + PGGP I+ Q
Sbjct: 244 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSV 303
Query: 316 AKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIG 375
LG+ + + + VL+ +GNM VS+ F+L+ + +++ + + + GV F G
Sbjct: 304 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQA------ESAKAISTGVAFAFG 357
Query: 376 AGVTVDTVVLRS 387
GVTV+ ++
Sbjct: 358 PGVTVEGMLFDI 369
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 227 bits (578), Expect = 2e-73
Identities = 151/236 (63%), Positives = 191/236 (80%), Gaps = 1/236 (0%)
Query: 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRIC 60
M V + + Q+ G ATILAIGTANP NC+ Q+ YPD+YF++TNS+H T LK+KF+R+C
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 EKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQS 120
+KS +K+RY ++TE+ILK+NPN+C Y SLD+RQD++V EVP+LG+EAA KAIKEWGQ
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180
KS+ITHLI C+ GVDMPGADYQLTK+LGL P VKR M+Y QGC+ G T +R+AKD AEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKP 236
N GARVLVVCS+++ TFRGPSD +L L GQALFGDGAAALI+G++P + EKP
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEI-EKP 235
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Score = 173 bits (439), Expect = 1e-53
Identities = 87/156 (55%), Positives = 116/156 (74%)
Query: 234 EKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGI 293
E+P+F+IVS QTILP ++ + RE GLT L ++V +V++NIE ++A SP GI
Sbjct: 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGI 62
Query: 294 KDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353
DWNS+FW+V PGG AI++Q+E KL LK+ KL A+RHVLSEYGN+ V FI+DE+R++
Sbjct: 63 TDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKR 122
Query: 354 SAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
S EGK TTGEGL+ GV+FG G G+TV+TVVLRS
Sbjct: 123 SMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR 158
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 172 bits (436), Expect = 3e-53
Identities = 91/153 (59%), Positives = 114/153 (74%)
Query: 237 LFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDW 296
+F++V AQTI P S+ + G RE GLT HL K+V +VS+NI K L EAF P GI D+
Sbjct: 1 IFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDY 60
Query: 297 NSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356
NS+FWI PGGPAI++Q+E KL LK +K++ATR VLSEYGNM V FILDE+R+KS +
Sbjct: 61 NSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQ 120
Query: 357 EGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
G TTGEGLEWGV+FG G G+T++TVVLRS
Sbjct: 121 NGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Score = 166 bits (421), Expect = 5e-51
Identities = 84/153 (54%), Positives = 108/153 (70%)
Query: 237 LFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDW 296
F+IV AQT++P S+ + G+ RE+GLT L V ++S NIE C+ EAFS F I DW
Sbjct: 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 61
Query: 297 NSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356
N LFW+V PGG AI++++EAKL L KL TRHV+SEYGNM V FILD+ R+ S +
Sbjct: 62 NKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQ 121
Query: 357 EGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
G TTGEGLE GV+FG G G+T++TVVL+S P
Sbjct: 122 NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 154
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 157 bits (399), Expect = 3e-47
Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 12/210 (5%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
AT+ + P + I + + R R+ E + V+ R+ +
Sbjct: 1 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQL---PLALRLIENTGVRTRHIVQPIED 57
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
++P R + RE +A+ + + I +I+ S G
Sbjct: 58 TLEHPGFED--------RNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM 109
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG 196
MP L +G + + +++ + GC G AI A DF P A L+V +
Sbjct: 110 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 169
Query: 197 TFRGPSDANLGCLAGQALFGDGAAALIIGA 226
++ P+D +G L LFGDG AA ++
Sbjct: 170 CYQ-PTDLGVGSLLCNGLFGDGIAAAVVRG 198
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 116 bits (291), Expect = 6e-32
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 8/149 (5%)
Query: 238 FQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWN 297
++ ++P ++ + + G L K V + E + L E G +
Sbjct: 4 VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDASD 62
Query: 298 SLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE 357
F+IV GGP I++ + L + +R L+EYGN+ V R+ +E
Sbjct: 63 LDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD----ALRRLFDE 118
Query: 358 GKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
G V G G++ G G G+T + +
Sbjct: 119 GGVEEG---ARGLLAGFGPGITAEMSLGC 144
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Score = 71.0 bits (173), Expect = 3e-15
Identities = 37/211 (17%), Positives = 58/211 (27%), Gaps = 50/211 (23%)
Query: 19 ILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF-HVTEDIL 77
I I P V + + + + V +DI
Sbjct: 4 IDKINFYVPKYY------------VDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDI- 50
Query: 78 KKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM 137
S+ A + K +I +I + VD
Sbjct: 51 -----------VSMG----------------ANAAKDIITDEDKKKIGMVIVATESAVDA 83
Query: 138 PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT 197
A L R + CY AI++AKD+ P +VLV+ +D +
Sbjct: 84 AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG 143
Query: 198 FRGPSDANLGCLAGQALFGDGAAALIIGANP 228
G+ G GA A++I NP
Sbjct: 144 LNSG---------GEPTQGAGAVAMVIAHNP 165
|
| >d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 57.6 bits (138), Expect = 2e-10
Identities = 36/211 (17%), Positives = 61/211 (28%), Gaps = 44/211 (20%)
Query: 19 ILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILK 78
+L++G P VTN + + + I ++ +K R F ++
Sbjct: 15 LLSVGAYRPER------------VVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAA 62
Query: 79 KNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMP 138
EA +A+ G S + I +I +
Sbjct: 63 SMAT-------------------------EACRRALSNAGLSAADIDGVIVTTNTHFLQT 97
Query: 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTF 198
+ L G A+ A D A +LVV ++ T
Sbjct: 98 PPAAPMV-AASLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTI 156
Query: 199 RGPSDANLGCLAGQALFGDGAAALIIGANPD 229
D +F DGAAA+++G P
Sbjct: 157 D-MYDRGN-----CFIFADGAAAVVVGETPF 181
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 50.5 bits (120), Expect = 3e-08
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 270 KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329
K V ++ EA G+ + + ++ I++ + +LG+ + + +
Sbjct: 40 KRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVS-- 97
Query: 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389
+ GN SV LD + R G V G +M G GAG++ L
Sbjct: 98 RDAEDTGNTSSASVALALDRLVR----SGAVPGG---GPALMIGFGAGLSYAGQALLLPD 150
Query: 390 FPT 392
P+
Sbjct: 151 PPS 153
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 49.9 bits (118), Expect = 6e-08
Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 46/214 (21%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
I+ G+ P TN+D ++ + I ++ +++R+ +
Sbjct: 3 TKIIGTGSYLPEQ------------VRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNET 50
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
+ G EAAT+AI+ G K QI ++ +
Sbjct: 51 VSTM-------------------------GFEAATRAIEMAGIEKDQIGLIVVATTSATH 85
Query: 137 -MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSL 195
P A Q+ MLG+ + + A+ +A + ++ LVV SD+ L
Sbjct: 86 AFPSAACQIQSMLGIKGCPAFDVAAACAGFT--YALSVADQYVKSGAVKYALVVGSDV-L 142
Query: 196 GTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229
P+D +FGDGA A ++ A+ +
Sbjct: 143 ARTCDPTDRGTI-----IIFGDGAGAAVLAASEE 171
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 49.3 bits (117), Expect = 6e-08
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 9/117 (7%)
Query: 270 KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329
V + + A G++ ++ I + L L+ + A
Sbjct: 40 PAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVA-- 97
Query: 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
+ + GN S+ + E+ G G + ++ G GAG++ V+R
Sbjct: 98 NDIEHTGNTSAASIPLAMAELLT----TGAAKPG---DLALLIGYGAGLSYAAQVVR 147
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 49.1 bits (116), Expect = 1e-07
Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 44/213 (20%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
+ +L +G+ P V+N + T + + I ++ ++ R ++
Sbjct: 10 SRVLGVGSYRPRR------------EVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDET 57
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
+ +G A+ +A++ G ++I ++ ++
Sbjct: 58 -------------------------IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFV 92
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG 196
+ C A+ +A D E+ VLVV ++
Sbjct: 93 HTPPLSVAIAHELGADNA-GGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD 151
Query: 197 TFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229
+D +L LFGDGA A ++G +
Sbjct: 152 VID-LADRSLS-----FLFGDGAGAAVVGPSDV 178
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 42.2 bits (98), Expect = 2e-05
Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 45/213 (21%)
Query: 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDI 76
+ ILA+G P +TN+D L + I ++ +K+R
Sbjct: 1 SGILALGAYVPER------------VMTNADFEAYLDTSDEWIVTRTGIKERR------- 41
Query: 77 LKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD 136
A + +A ++ + + +I +
Sbjct: 42 -------VAAEDEYTSDL-----------AFKAVEDLLRRHPGALEGVDAVIVATNTPDA 83
Query: 137 MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG 196
+ L + + +L +I A A A E +VL V ++
Sbjct: 84 LFPDTAALVQARFGLKAFAYDLLAGCPGWIYALA--QAHALVEAGLAQKVLAVGAEALSK 141
Query: 197 TFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229
+D L FGDG A ++G +
Sbjct: 142 IID-WNDRATAVL-----FGDGGGAAVVGKVRE 168
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 38.7 bits (89), Expect = 3e-04
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 272 VATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHV 331
V V + +DE + + + + I++ KLG+ + T
Sbjct: 38 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLD- 96
Query: 332 LSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
+GN SV LDE +G++ G+ ++ G G T + ++R
Sbjct: 97 --RHGNTSAASVPCALDEAV----RDGRIKPGQ---LVLLEAFGGGFTWGSALVR 142
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 35.5 bits (81), Expect = 0.003
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 10/117 (8%)
Query: 270 KNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329
+ V + EA G+ + ++ I++ +LGL ++
Sbjct: 39 REVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWER---VA 95
Query: 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386
+ YGN S+ L E + G++ G+ ++ GAG+T VL
Sbjct: 96 VNVDRYGNTSTASIPLALKEAV----DAGRIREGD---HVLLVSFGAGLTWAAAVLT 145
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 100.0 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 100.0 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 100.0 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 100.0 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 100.0 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 100.0 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.97 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.96 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.96 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.96 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.95 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.93 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.93 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.93 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.93 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.16 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.12 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.07 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.06 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.02 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.01 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.9 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.82 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.68 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.6 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.52 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.29 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.11 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.42 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.39 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 96.26 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.19 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.08 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.54 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 94.91 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 94.75 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 94.54 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 94.44 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 93.98 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 93.39 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 91.88 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 90.23 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 89.23 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 86.75 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 85.82 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 84.99 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 83.08 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 81.24 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-59 Score=459.81 Aligned_cols=362 Identities=23% Similarity=0.410 Sum_probs=300.2
Q ss_pred CCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChh
Q 016111 13 GGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLD 92 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
|-...+|.|+|+|+|+++|+|+|+.+.+.+.... +..++++.+|++++||++||++.++.. ..+++.....+.+.
T Consensus 8 p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~---~~~~~~~~ri~~~tGI~~R~~~~~~~~--~~~~~~~~~~~~~~ 82 (372)
T d1teda_ 8 PTTVAVIEGLATGTPRRVVNQSDAADRVAELFLD---PGQRERIPRVYQKSRITTRRMAVDPLD--AKFDVFRREPATIR 82 (372)
T ss_dssp CCCEEEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTS--TTHHHHTTCSSCHH
T ss_pred CCceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCC---hHHHHHHHHHHHccCCcccceeccccc--cchhhhhhcCCCHH
Confidence 3344789999999999999999999987543211 122345678999999999999865421 11122233467899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHHHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGATAI 171 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~aL 171 (395)
+|+..|.+++.+|+++|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++. .+++ +.||+|++.||
T Consensus 83 ~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~~~~~~gC~g~~~aL 161 (372)
T d1teda_ 83 DRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNAL 161 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCcee-EeeccccCccHHHHHH
Confidence 999999999999999999999999999999999999999988889999999999999998763 5666 46999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCC
Q 016111 172 RMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGS 251 (395)
Q Consensus 172 ~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (395)
++|.++|++|+.++||||++|.++..+. +. .++.+....++|||||+|+||++++.........+.+.+.....+|.+
T Consensus 162 ~~A~~~l~sg~~~~~LVV~~E~~s~~~~-~~-d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (372)
T d1teda_ 162 GTATNYVRAHPAMKALVVCIELCSVNAV-FA-DDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNT 239 (372)
T ss_dssp HHHHHHHHHSTTCEEEEEEEEECGGGCC-CC-SSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTC
T ss_pred HHHHHHHhcCCCccceeeeehhhccccc-CC-CcchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCC
Confidence 9999999999999999999999987553 22 235566778899999999999987764210112344445555567777
Q ss_pred cCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHH
Q 016111 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
.+...+.....++.+..++++++.+.+.++++++++|+++|++. +|| +|++||+|.++++.+.++||++.+|+..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~ 318 (372)
T d1teda_ 240 EDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWD 318 (372)
T ss_dssp TTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHH
T ss_pred ccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCH-HHhhhhhccCccHHHHHHHHHHcCCCHHHhhhhHH
Confidence 66666767667766667999999999999999999999999997 999 9999999999999999999999999988888
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++++||||+|||+|++|++++++ +++.+|. |++++++||+|+||+++||++.-
T Consensus 319 ~l~~~GN~~sasip~~L~~~l~~----g~~~~g~--d~vll~~fG~G~s~~~~ll~~~~ 371 (372)
T d1teda_ 319 VLARFGNMLSVSLIFVLETMVQQ----AESAKAI--STGVAFAFGPGVTVEGMLFDIIR 371 (372)
T ss_dssp HHHHHCBCTHHHHHHHHHHHHHS----CSSSSSS--EEEEEEEEETTTEEEEEEEEECC
T ss_pred HHhccCCcHHHHHHHHHHHHHHh----CCCCCCC--CEEEEEEEcHHHhHHHHhheeec
Confidence 89999999999999999999998 7776652 89999999999999999999853
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=100.00 E-value=4.2e-40 Score=299.59 Aligned_cols=231 Identities=64% Similarity=1.079 Sum_probs=200.4
Q ss_pred CccccccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcC
Q 016111 1 MEKVKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKN 80 (395)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 80 (395)
|-.|.|.|+.|++.++++|.|+|+|+|+++|+|+++.+.+.++...+..+...++..|+++++||++||++.+++.++..
T Consensus 1 ~~~~~~~~~~~r~~~pa~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~ 80 (235)
T d1bi5a1 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKEN 80 (235)
T ss_dssp CCCHHHHHHHHSCCSCCEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTC
T ss_pred CCCHHHHhhccCCCCCcEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccC
Confidence 56678899999999999999999999999999999999987776665556777788999999999999999887765555
Q ss_pred CCCcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec
Q 016111 81 PNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY 160 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i 160 (395)
+...++..+.++.+++.+.+...+|+++|++++|+++|++++|||+||++|+|++..|+.+..++++||+......++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~ 160 (235)
T d1bi5a1 81 PNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160 (235)
T ss_dssp HHHHSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEE
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeee
Confidence 55666778999999999999999999999999999999999999999999999977788899999999887655445667
Q ss_pred CccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCC
Q 016111 161 FQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTT 231 (395)
Q Consensus 161 ~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~ 231 (395)
++||+|++.||++|.+++++|+.++||||++|.+|..+..+++.+.++....++|||||+|+||+.+|..+
T Consensus 161 ~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~~~ 231 (235)
T d1bi5a1 161 QQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPE 231 (235)
T ss_dssp SCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTT
T ss_pred cCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCCCC
Confidence 99999999999999999999999999999999999866433333344555678999999999999887654
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.7e-36 Score=266.51 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=170.1
Q ss_pred EEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHHH
Q 016111 18 TILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDI 97 (395)
Q Consensus 18 ~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
+|.++++|+|+++++|+|+.+.+......+ +. .++..++++++||++||++.|+|.. ...|...++++.
T Consensus 2 ~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~--~~-~~~~~~i~~~tGI~~R~~~~~~e~~--------~~~~~~~~~~~~ 70 (200)
T d1u0ma1 2 TLCRPSVSVPEHVITMEETLELARRRHTDH--PQ-LPLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDRNKV 70 (200)
T ss_dssp EECCCEEECCSEEEEHHHHHHHHHHHHTTC--TT-HHHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHHHHH
T ss_pred eeccceEECCCeeEcHHHHHHHHHHhCCCc--hh-HHHHHHHHHhCCCCeeeEECChhhh--------ccCCCHHHHHHH
Confidence 689999999999999999999876543222 22 3456789999999999999887742 235778999999
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGATAIRMAKD 176 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~aL~~A~~ 176 (395)
+.+.+.+|+++|+++||+++|++|+|||+||++|++++..|+.+..|+++||+.+... .+++ ++||+|++.+|++|.+
T Consensus 71 ~~~~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~-~~~i~~~gC~g~~~al~~A~~ 149 (200)
T d1u0ma1 71 YEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAHD 149 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCee-EeccccchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999889999999999999988653 6676 6899999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecC
Q 016111 177 FAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGAN 227 (395)
Q Consensus 177 ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~ 227 (395)
++++|+.++||||++|.+|..+ +|.+.+..+..+.++|||||+|+||+.+
T Consensus 150 ~l~~~~~~~vLvv~~e~~S~~~-~~~d~~~~~~~~~~lFgDGAaA~ll~~~ 199 (200)
T d1u0ma1 150 FCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGR 199 (200)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred HHHhCCCCEEEEEEEecccccc-CCCCCChhhhhcccccccccEEEEEecC
Confidence 9999999999999999999754 4655555555678899999999999864
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-36 Score=264.13 Aligned_cols=171 Identities=25% Similarity=0.334 Sum_probs=152.9
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
..+|.|+|+|+|+++++|+|+.+.+ +.+ .+|+.+++||++||+..+++.
T Consensus 2 ~a~I~g~g~ylP~~~v~n~el~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~~------------------- 50 (174)
T d1hnja1 2 YTKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNET------------------- 50 (174)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTCC-------------------
T ss_pred ccEEEEEEEECCCCcccHHHHHHHh---CCC---------HHHHHhccCcceeeecCCCcc-------------------
Confidence 4789999999999999999998764 222 278999999999999987763
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
..+|+.+|++++|+++|+++++||+||++|+++ +..|+.+.+|+++||+++.. +||++++|+|++.||++|
T Consensus 51 ------~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--~~di~~~C~g~~~al~~A 122 (174)
T d1hnja1 51 ------VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVA 122 (174)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHH
T ss_pred ------chHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--hhhhhhhhccHHHHHHHH
Confidence 889999999999999999999999999999999 88999999999999998754 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTT 231 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~ 231 (395)
..++++|..+++|||++|..|. +.++. ++.+.++|||||+|+||+++++.|
T Consensus 123 ~~~i~sg~~~~~Lvv~~e~~S~-~~~~~-----d~~~~~lfGDgA~A~vl~~~~~~G 173 (174)
T d1hnja1 123 DQYVKSGAVKYALVVGSDVLAR-TCDPT-----DRGTIIIFGDGAGAAVLAASEEPG 173 (174)
T ss_dssp HHHHHTTSCSEEEEEEEECHHH-HSCTT-----CHHHHTTBCCEEEEEEEEEESSCS
T ss_pred HHHHhcCCcceeEEEeeehhhc-ccCCC-----CCCeEEEeceeeEEEEEEeCCCCC
Confidence 9999999999999999999997 44443 445678999999999999987654
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=100.00 E-value=7.3e-36 Score=261.12 Aligned_cols=170 Identities=18% Similarity=0.287 Sum_probs=151.9
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQD 96 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.+|.|+|+|+|+++++|+++.+.+ +.+ .+|+.+++||++||++.++|+
T Consensus 10 arI~g~g~ylP~~~v~n~e~~~~~---~~~---------~~~i~~~tGi~~R~~~~~~e~-------------------- 57 (181)
T d1mzja1 10 SRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDET-------------------- 57 (181)
T ss_dssp EEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTCC--------------------
T ss_pred cEEEEEEEECCCceecHHHHHHHc---CCC---------HHHHHhccCcceehhhccCCc--------------------
Confidence 789999999999999999998764 222 278999999999999988773
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.+|+++|++++|+++|++++|||+||++|++| +..|+.+..||++||.++.. ++|++++|+|++.||++|.
T Consensus 58 -----~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~--~~Dv~~~C~g~~~aL~~A~ 130 (181)
T d1mzja1 58 -----IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIAA 130 (181)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHHH
T ss_pred -----HHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCcc--ceeHHhhhccHHHHHHHHh
Confidence 899999999999999999999999999999999 78999999999999988764 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCC
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTT 231 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~ 231 (395)
++++++..++||||++|.+|. +.++. ++.+.++|||||+|+||++++..+
T Consensus 131 ~~i~~~~~~~~LvV~~e~~s~-~~~~~-----d~~~~~lfGDGAaA~ll~~~~~~G 180 (181)
T d1mzja1 131 DAVESGGSRHVLVVATERMTD-VIDLA-----DRSLSFLFGDGAGAAVVGPSDVPG 180 (181)
T ss_dssp HHHHHSSCSCEEEEEEEEGGG-GSCSS-----CTTTTTTBCEEEEEEEEEEESSCC
T ss_pred CHhhcCCCceeEEeeeccccc-cCCCC-----CcceEEEeeeeeEEEEEEeCCCCc
Confidence 999999999999999999997 44554 334578999999999999877654
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.6e-35 Score=255.52 Aligned_cols=167 Identities=20% Similarity=0.288 Sum_probs=149.0
Q ss_pred EEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHHH
Q 016111 18 TILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDI 97 (395)
Q Consensus 18 ~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
+|.|+|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.++++
T Consensus 2 gI~~ig~ylP~~~v~n~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~e~--------------------- 48 (172)
T d1ub7a1 2 GILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDEY--------------------- 48 (172)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTCC---------------------
T ss_pred ceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHhccCceeeeecccccc---------------------
Confidence 69999999999999999998763 222 278999999999999988773
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ 176 (395)
..+|+.+|+++||+++|++|+|||+||++|++| +..|+.+.+|+++||.+ .. +||++.+|+|++.||++|..
T Consensus 49 ----~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~-~~--~~di~~~C~g~~~al~~a~~ 121 (172)
T d1ub7a1 49 ----TSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AF--AYDLLAGCPGWIYALAQAHA 121 (172)
T ss_dssp ----HHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCC-CE--EEEEECSTTHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccC-cc--ceeehhccccHHHHHHHHhh
Confidence 899999999999999999999999999999999 78999999999999954 43 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC
Q 016111 177 FAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT 230 (395)
Q Consensus 177 ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~ 230 (395)
++++|..++||||++|.+|. +.+++ ++.+..+|||||+|+||++.++.
T Consensus 122 ~~~~~~~~~~Lvv~~e~~S~-~~~~~-----d~~~~~lfGDgAaA~ll~~~~~~ 169 (172)
T d1ub7a1 122 LVEAGLAQKVLAVGAEALSK-IIDWN-----DRATAVLFGDGGGAAVVGKVREG 169 (172)
T ss_dssp HHHTTSCSEEEEEEEECGGG-TSCTT-----CHHHHTTBCCEEEEEEEECCCTT
T ss_pred hhhcCCcceeEEeccccccc-ccCCC-----CcCeEEEecceeEEEEEEEcCCC
Confidence 99999999999999999997 44443 34568899999999999998763
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.97 E-value=4.2e-32 Score=234.05 Aligned_cols=163 Identities=23% Similarity=0.339 Sum_probs=143.4
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQD 96 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
|+|.++|+|+|+++++|+|+.+.. +.+ .+|+.+++||++||++.++|+
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~---g~~---------~~~i~~~~Gi~~r~~~~~~E~-------------------- 49 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR---QVD---------PNKFLIGIGQTEMAVSPVNQD-------------------- 49 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT---TSC---------HHHHHTTTCCSEEEECCTTCC--------------------
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh---CCC---------HHHHHHhcCcEEEEeCCCccC--------------------
Confidence 789999999999999999998764 222 278999999999999988773
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.+|+++|++++|++.+ +++||+||++|+++ +..|+.+..++.+||++... .+|+++++|+|++.||++|.
T Consensus 50 -----~~~ma~~Aa~~al~~~~--~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~-~~~dv~~~C~g~~~al~~A~ 121 (166)
T d1xpma1 50 -----IVSMGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA-RCFEMKEACYAATPAIQLAK 121 (166)
T ss_dssp -----HHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSC-EEEEEESTTTTHHHHHHHHH
T ss_pred -----HHHHHHHHHHhhhcccc--CCCCCeEEEeccccccccchhHHHHHHhhccccce-EEeeecccHHHHHHHHHHHh
Confidence 89999999999998875 77999999999999 78999999999999998765 48999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
+++++++.+++|||++|..+..+. + . ...+|||||+|+||+++|
T Consensus 122 ~~i~~~~~~~alvV~sd~~~~~~~---~---~---~~~~fGDGA~A~ll~~~P 165 (166)
T d1xpma1 122 DYLATRPNEKVLVIATDTARYGLN---S---G---GEPTQGAGAVAMVIAHNP 165 (166)
T ss_dssp HHHTTCTTCEEEEEEEEEECCCTT---C---S---SGGGCEEEEEEEEEEESC
T ss_pred hHHhcCCCCeEEEEEEceEeccCC---C---C---CCccCCCeeEEEEEecCC
Confidence 999999999999999998775321 1 1 136799999999999987
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.96 E-value=5.6e-29 Score=211.35 Aligned_cols=156 Identities=54% Similarity=0.913 Sum_probs=142.5
Q ss_pred CCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHH
Q 016111 234 EKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVN 312 (395)
Q Consensus 234 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~ 312 (395)
+++.|++.+..+.++|++++.+.|.+.+.|+.+.++++||+++.+.++++++++|+++|++. +|+ +|++||+|++|++
T Consensus 3 E~Plfei~~~~~~~iP~s~~~~~~~v~~~G~~~~l~r~Vp~~~~~~v~~~v~~~l~~~gl~~-~di~~~v~Hqgg~~Ild 81 (160)
T d1ee0a2 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITD-WNSVFWMVHPGGRAILD 81 (160)
T ss_dssp CCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSSHHHHH
T ss_pred ccchhhhcccCCeEECCCccccCeeecCCceEEeeCchhHHHHHHHHHHHHHHHHhhccCCc-cccceEeecCCcHHHHH
Confidence 45789999999999999999999999999988888999999999999999999999999997 899 9999999999999
Q ss_pred HHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 313 QIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 313 ~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
.++++||++.+++..+|+++++||||+|||+|++|++++++...++..+.|++.|++++++||+|+||++++||..++
T Consensus 82 ~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~~ 159 (160)
T d1ee0a2 82 QVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRV 159 (160)
T ss_dssp HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHeeccC
Confidence 999999999999999999999999999999999999998864444555555555899999999999999999998764
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.96 E-value=9.3e-29 Score=208.82 Aligned_cols=151 Identities=59% Similarity=0.993 Sum_probs=139.9
Q ss_pred eEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHH
Q 016111 238 FQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEA 316 (395)
Q Consensus 238 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~ 316 (395)
|++....+.++|++++.+.|++++.|+.+.++++||+++.+.++++++++|+++|++. +|+ +|++||+|++|++.+++
T Consensus 2 fei~~~~~~~iP~t~~~m~~~v~d~G~~~~l~r~Vp~~i~~~i~~~~~~~l~~~gl~~-~di~~~v~Hqgg~~Ild~v~~ 80 (154)
T d1bi5a2 2 FEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISD-YNSIFWIAHPGGPAILDQVEQ 80 (154)
T ss_dssp EEEEEEEEEECTTCTTSEECCEETTEECCEECSCHHHHHHHHHHHHHHHHHGGGTCCC-TTSSEEEECCSSHHHHHHHHH
T ss_pred EEEEeCCCeEeCCCcccccccccCCcEEeecccchHHHHHHHHHHHHHHHHHHcCCCc-cccceEeeccccHHHHHHHHH
Confidence 7889889999999999999999999998888999999999999999999999999997 888 99999999999999999
Q ss_pred HcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 317 KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 317 ~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+||++++++..||+++.+||||+||++|+.|+++.++..+.+..+.|.+.|++++++||+|+||++++||+.+
T Consensus 81 ~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~~ 153 (154)
T d1bi5a2 81 KLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153 (154)
T ss_dssp HHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence 9999999999999999999999999999999999886554566666665689999999999999999999864
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.96 E-value=2e-28 Score=207.49 Aligned_cols=152 Identities=53% Similarity=0.905 Sum_probs=139.8
Q ss_pred ceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHH
Q 016111 237 LFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIE 315 (395)
Q Consensus 237 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~ 315 (395)
.|++....+.++|++++.+.|++.+.|+.+.+++++|+++.+.++++++++|++++++. +|+ +|++||+|.+|++.++
T Consensus 2 ~feiv~~~~~~iP~t~~~~~~~~~~~G~~~~l~~~Vp~~v~~~i~~~~~~~l~~~~~~~-~did~~i~Hqgg~~Ild~v~ 80 (156)
T d1u0ua2 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISD-WNKLFWVVHPGGRAILDRVE 80 (156)
T ss_dssp CEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHH
T ss_pred eEEEEeCCCeEeCCCccccceeeecCcEEEEEcchhHHHHHHHHHHHHHHHHHHcCCCh-hhCceEeecCCcHHHHHHHH
Confidence 48999999999999999999999999998888999999999999999999999999997 899 9999999999999999
Q ss_pred HHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 316 AKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 316 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++||++++++..||+++.+|||++||++|+.|+++.++..+.+..+.|++.|++++++||+|+||++++||..+
T Consensus 81 ~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 81 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 99999999999999999999999999999999999876444455565555599999999999999999999865
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.95 E-value=6.9e-28 Score=202.78 Aligned_cols=144 Identities=24% Similarity=0.431 Sum_probs=134.0
Q ss_pred ceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHH
Q 016111 237 LFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIE 315 (395)
Q Consensus 237 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~ 315 (395)
.+++...++.++|++++.+.|.+++.|+.+.+.+.++..+ +.+.++++++|+++|++. +|| +|++||+|.++++.++
T Consensus 3 ~~~l~~~~~~~~P~t~~~~~~~~~~~g~~~~l~~~~p~~i-~~~~~~i~~~l~~~g~~~-~did~~~~Hq~~~~i~~~i~ 80 (148)
T d1u0ma2 3 GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLS 80 (148)
T ss_dssp EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGH-HHHHHHHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHH
T ss_pred ceEEEecCCEEccCChhhcceEeecCeEEEEEecccchHH-HHHHHHHHHHHHHhCCCH-HHCCEEEECCCCHHHHHHHH
Confidence 4788888888899999999999999998888888888754 668899999999999997 999 9999999999999999
Q ss_pred HHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 316 AKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 316 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++||++++++..+++++++|||++||++|++|++++++ |++++| |+|++++||+|++|+++++||..
T Consensus 81 ~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~----~~~~~G---d~ill~gfG~G~s~~~~llrW~~ 147 (148)
T d1u0ma2 81 TFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQT 147 (148)
T ss_dssp HHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEEC
T ss_pred HHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHc----CCCCCC---CEEEEEEEchHhEeeEEEEEEcc
Confidence 99999999999888899999999999999999999998 899999 99999999999999999999975
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.93 E-value=7.3e-27 Score=197.54 Aligned_cols=118 Identities=22% Similarity=0.330 Sum_probs=110.6
Q ss_pred EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccch
Q 016111 265 TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVS 342 (395)
Q Consensus 265 ~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas 342 (395)
.++| |++||+++++.++++++++|+++|++. +|| +|++||+|+++++.++++||+|.+++... ++++||||+|||
T Consensus 34 ~~~m~G~~v~~~av~~vp~~i~~~L~~~gl~~-~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~--~~~~~GNt~Sas 110 (153)
T d1mzja2 34 ALVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR--DAEDTGNTSSAS 110 (153)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC--THHHHCBCTTHH
T ss_pred eEEEcCHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh--hhhhcCCcccch
Confidence 3566 899999999999999999999999997 999 99999999999999999999999997643 589999999999
Q ss_pred HHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 343 VFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 343 ~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
+|++|++++++ +++++| |+|+|++||+|++|++++|+|.+.|.
T Consensus 111 ip~~L~~~~~~----~~~~~G---d~ill~~fG~G~s~~~~~l~~~~~~~ 153 (153)
T d1mzja2 111 VALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPPS 153 (153)
T ss_dssp HHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCCCC
T ss_pred HHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhhEEEEEecCCCC
Confidence 99999999998 899999 99999999999999999999999874
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.8e-26 Score=193.04 Aligned_cols=111 Identities=22% Similarity=0.390 Sum_probs=106.4
Q ss_pred EEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchH
Q 016111 266 VHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSV 343 (395)
Q Consensus 266 ~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~ 343 (395)
++| |+++|+++++.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|++. ++++||||+|||+
T Consensus 31 ~~m~G~~vf~~av~~~~~~i~~~L~~~g~~~-~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~---~~~~~GN~~sasi 106 (143)
T d1hnja2 31 LTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVV---TLDRHGNTSAASV 106 (143)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC---CHHHHCBCGGGHH
T ss_pred EEEEChHHhhhhhhhhhHHHHHHHHHhhhcc-cccceEEeccCchHHHHHHHHhCccchhhhhh---hhhhhcccccchH
Confidence 455 899999999999999999999999997 999 9999999999999999999999999987 4999999999999
Q ss_pred HHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 344 FFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 344 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
|++|++++++ +++++| |+|++++||+|++|+++++||
T Consensus 107 p~~L~~~~~~----~~~~~G---d~vll~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 107 PCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 143 (143)
T ss_dssp HHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHh----CCCCCC---CEEEEEEEehhhhhEEEEEEC
Confidence 9999999998 899999 999999999999999999998
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=2.2e-26 Score=193.96 Aligned_cols=114 Identities=19% Similarity=0.346 Sum_probs=108.5
Q ss_pred EEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchH
Q 016111 266 VHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSV 343 (395)
Q Consensus 266 ~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~ 343 (395)
+.| |+++|+++.+.++++|+++|+++|+++ +|| +|++||+|.++++.++++|++++++++. ++++||||++||+
T Consensus 34 ~~M~G~~vf~~a~~~vp~~i~~~L~~~g~~~-~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~---~~~~~Gn~~sasi 109 (149)
T d1ub7a2 34 LYMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAV---NVDRYGNTSTASI 109 (149)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC---CHHHHCBCGGGHH
T ss_pred EEEccHHHHHHHHHHHHHHHHHHHHhhcccc-ccccEEEeeccchHHHHHHHhhccchhhHHHH---HHHHhcCCcchhH
Confidence 345 899999999999999999999999997 999 9999999999999999999999999987 4999999999999
Q ss_pred HHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 344 FFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 344 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
|++|++++++ +++++| |+|++++||+|++|+++++||+++
T Consensus 110 p~~L~~~~~~----~~~~~G---d~vll~g~G~G~s~ga~llrw~g~ 149 (149)
T d1ub7a2 110 PLALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGGA 149 (149)
T ss_dssp HHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCC
T ss_pred HHHHHHHHHc----CCCCCC---CEEEEEEEchHhhhEEEEEEECCC
Confidence 9999999998 899999 999999999999999999999874
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.93 E-value=3.4e-26 Score=192.32 Aligned_cols=113 Identities=19% Similarity=0.334 Sum_probs=106.9
Q ss_pred EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccch
Q 016111 265 TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVS 342 (395)
Q Consensus 265 ~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas 342 (395)
+++| |++||+++.+.++++|+++|+++|+++ +|| +|++||+|.++++.++++||+|++|+..+ ++++||||+|||
T Consensus 34 ~~~m~G~~Vf~~a~~~v~~~i~~~L~~~gl~~-~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~--~~~~~GNt~sas 110 (148)
T d1u6ea2 34 FVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVAN--DIEHTGNTSAAS 110 (148)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC--THHHHCBCGGGH
T ss_pred cEEeecHHHHHHHHHHHHHHHHHHHHHcCCCc-ccccEEEeccccHHHHHHHHHhcCCCchhhhhh--hHHhhCCCccch
Confidence 3566 899999999999999999999999997 999 99999999999999999999999998764 699999999999
Q ss_pred HHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 343 VFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 343 ~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+|++|++++++ |++++| |++++++||+|++|+++++|+
T Consensus 111 ip~~L~~a~~~----g~i~~G---d~vll~gfG~G~s~~a~llrv 148 (148)
T d1u6ea2 111 IPLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRM 148 (148)
T ss_dssp HHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEeC
Confidence 99999999998 999999 999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.16 E-value=6.7e-11 Score=106.63 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C--------------------------CCCCHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V--------------------------DMPGADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~--------------------------~~p~~a~~l~~~Lg 149 (395)
....|+..|+.+||+++|+++++++ .|+++++.+ . .....+.+|+..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 4567899999999999999887654 677776533 0 01235679999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC----------CCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TFR----------GPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~----------~~~~~~~~~ 208 (395)
+... ++.+..+|++++.||.+|..+|++|..+.+||.++|.... .+. .|.|.
T Consensus 150 l~Gp---~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~---- 222 (249)
T d1j3na1 150 FTGP---SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTL---- 222 (249)
T ss_dssp CCSC---BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT----
T ss_pred CCCC---ccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccC----
Confidence 9975 6889999999999999999999999999999999997532 010 12221
Q ss_pred hhhhhhhccccEEEEEecCC
Q 016111 209 LAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~ 228 (395)
...++++|+||+++||++.+
T Consensus 223 ~~dG~v~gEGa~~lvLe~~~ 242 (249)
T d1j3na1 223 SRDGFVMGEGAGVLVLEAYE 242 (249)
T ss_dssp TCCCBCBBCEEEEEEEEEHH
T ss_pred CCCCEeeEeEEEEEEEccHH
Confidence 22488999999999999753
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=3.4e-10 Score=101.95 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lg 149 (395)
....|+..|+++||+++|+++++.+ .|+++++.. . ..+ ..+.+|+..||
T Consensus 71 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 150 (250)
T d2gfva1 71 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG 150 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhC
Confidence 3567999999999999999877654 466665431 0 012 24778999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC----------CCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TFR----------GPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~----------~~~~~~~~~ 208 (395)
++.. ++.+..+|++++.||..|..+|++|.++.+||.++|.... .+. .|.|.
T Consensus 151 l~Gp---~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~---- 223 (250)
T d2gfva1 151 LRGP---SISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDK---- 223 (250)
T ss_dssp CCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT----
T ss_pred CCCC---ccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCC----
Confidence 9986 6889999999999999999999999999999999996431 011 12222
Q ss_pred hhhhhhhccccEEEEEecC
Q 016111 209 LAGQALFGDGAAALIIGAN 227 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~ 227 (395)
...++++|+||+++||++.
T Consensus 224 ~rdG~v~gEGaa~lVLE~~ 242 (250)
T d2gfva1 224 ERDGFVLGDGAGMLVLEEY 242 (250)
T ss_dssp TCCSBCBBCEEEEEEEEEH
T ss_pred CCCCEeeeeEEEEEEECcH
Confidence 2248899999999999874
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=4.7e-10 Score=102.30 Aligned_cols=95 Identities=13% Similarity=-0.005 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+..+++.+|+++|+++++||.||++++.+ . .....+..+.-..|++..+ +++.|+..|+|++.||..|.+.|
T Consensus 23 ~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~v-p~~tVn~~CaSg~~Ai~~a~~~I 101 (273)
T d1ulqa1 23 RPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV-AGCTVNRLCGSGLEAVAQAARAI 101 (273)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC-EEEEEECGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCcc-ceEEEecccchHHHHHHHHHHHH
Confidence 4889999999999999999999999999998877 2 3456788888888998765 48999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|++++|.+|.
T Consensus 102 ~~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 102 WAGEGKVYIGSGVESMSR 119 (273)
T ss_dssp HTTSCSEEEEEEEEESSS
T ss_pred hcCCCccceeeeccccch
Confidence 999999999999999995
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.02 E-value=7.6e-10 Score=100.48 Aligned_cols=95 Identities=9% Similarity=0.060 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+..+++.+|+++|++|++||.|++++..+ ...+..+.+++-..|++..+ +++.++..|+|++.|+.+|.+.|.
T Consensus 26 ~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~v-pa~tv~~~C~Sg~~Ai~~Aa~~I~ 104 (268)
T d1m3ka1 26 PAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEA-TAWGMNQLAGSGLRAVALGMQQIA 104 (268)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-EEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccc-cceeecccCcccchHHHHHHHHHh
Confidence 4889999999999999999999999999999876 45667888999999999765 489999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+|+++.|.+|.
T Consensus 105 ~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 105 TGDASIIVAGGMESMSM 121 (268)
T ss_dssp TTSCSCEEEEEEEESTT
T ss_pred CCCceEEeecccccccc
Confidence 99999999999999995
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.01 E-value=1.5e-09 Score=97.39 Aligned_cols=121 Identities=16% Similarity=0.150 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC------------------CC--------CC-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG------------------VD--------MP-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~------------------~~--------~p-~~a~~l~~~Lg 149 (395)
....|+..++.+||+++|+++..+. .|+++++.. .. .+ ..+..++..+|
T Consensus 71 ~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (250)
T d1e5ma1 71 RFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLG 150 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhcc
Confidence 4567999999999999999876543 566665421 01 11 25788999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc----------ccC----------CCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LG----------TFR----------GPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~----------~~~----------~~~~~~~~~ 208 (395)
+... ++.+..+|++++.||.+|.++|++|..+.+||.++|.. +. .+. .|.| .
T Consensus 151 l~Gp---~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD----~ 223 (250)
T d1e5ma1 151 AKGP---NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFD----K 223 (250)
T ss_dssp CCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTB----T
T ss_pred CCCC---CccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCC----C
Confidence 9986 68899999999999999999999999999999999964 21 011 1222 2
Q ss_pred hhhhhhhccccEEEEEecCC
Q 016111 209 LAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~ 228 (395)
...+++.|+||+++||++.+
T Consensus 224 ~~dG~~~gEGa~~~vLe~l~ 243 (250)
T d1e5ma1 224 DRDGFVMGEGSGILILEELE 243 (250)
T ss_dssp TCCSBCBBCEEEEEEEEEHH
T ss_pred CCCCEeeEeeEEEEEEeeHH
Confidence 23488999999999998743
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.90 E-value=2.3e-09 Score=96.92 Aligned_cols=95 Identities=8% Similarity=0.012 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+..+++++|++ +|+++++||.||++...+ ...+..+..+.-..|++..+ +++.++..|+|++.|+.+|...
T Consensus 29 ~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~v-p~~tV~~~C~Sgl~Ai~~aa~~ 107 (262)
T d1wdkc1 29 RAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTS-AAQTVSRLCGSSMSALHTAAQA 107 (262)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTS-EEEEEECGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhccccc-chhhccccccHHHHHHHHHHHH
Confidence 3789999999999997 899999999999998876 34567888888888998876 4899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|.+|..+.+|+++.|.+|.
T Consensus 108 I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 108 IMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp HHTTSCSEEEEEEEEETTT
T ss_pred HHhhcCCceeeeccccccc
Confidence 9999999999999999996
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.82 E-value=6.6e-09 Score=90.94 Aligned_cols=113 Identities=10% Similarity=0.011 Sum_probs=87.8
Q ss_pred CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH---------HHHHHHhcCCC
Q 016111 269 SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA---------TRHVLSEYGNM 338 (395)
Q Consensus 269 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~---------~~~~~~~~Gn~ 338 (395)
|+.-...+.+.+..+.+...++.|.+. +|+ ++++|++..++.+...+.+....++... +...-+++||+
T Consensus 31 G~~S~~~Yl~~l~~~~~~~~~~~g~~~-~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~ 109 (221)
T d1xpma2 31 GALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNI 109 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCC
T ss_pred CcchHHHHHHHHHHHHHHHHHHcCCCh-hhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCc
Confidence 455556677888889999999999986 899 9999999999988877776533222111 11112468999
Q ss_pred ccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 339 GGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 339 ~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++||+++.|..+++. +.+.+| ++|+|+|+|+|......-+++.+
T Consensus 110 YTaSlyl~L~Sll~~----~~~~~G---~rIglfSYGSG~~ae~fs~~V~~ 153 (221)
T d1xpma2 110 YTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVE 153 (221)
T ss_dssp GGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred chHHHHHHHHhhhcc----ccCCCC---CEEEEEEecCCcceeEEEEEEcc
Confidence 999999999999997 667889 99999999999987777777654
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.68 E-value=1.5e-08 Score=91.61 Aligned_cols=95 Identities=11% Similarity=-0.010 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHHh----CCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEW----GQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~a----g~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
++.+|+..+++++|+++ +++|++||.||+++..+ -..+..+.++.-..|++..+ +++.++..|+|++.||..|.
T Consensus 34 ~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~v-pa~tVnr~CaSg~~Ai~~Aa 112 (269)
T d1afwa1 34 NTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYST-PFVALNRQCSSGLTAVNDIA 112 (269)
T ss_dssp CHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS-CEEEEECGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhccccccc-cchhccccchHHHHHHHHHH
Confidence 47899999999999864 69999999999998766 22234577777788998776 48999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeecccc
Q 016111 176 DFAENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~ 196 (395)
+.|.+|..+.+|+++.|.+|.
T Consensus 113 ~~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 113 NKIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHHHTTSCSEEEEEEEEEHHH
T ss_pred HHHhhccccceeeeecccccc
Confidence 999999999999999999985
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.60 E-value=1.1e-07 Score=82.83 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=74.9
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------------CC----CC-CHHH
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------------VD----MP-GADY 142 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------------~~----~p-~~a~ 142 (395)
.....|+..|+++||+++|+++++++ .++++++.. +. .| ..+.
T Consensus 69 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 148 (216)
T d1tqya1 69 DRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPA 148 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHH
T ss_pred CcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHH
Confidence 34678999999999999999987654 355444421 00 12 2468
Q ss_pred HHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccc
Q 016111 143 QLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSL 195 (395)
Q Consensus 143 ~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s 195 (395)
+++..+|+... .+.+..+|++++.||..|..+|++|.++.+||.++|...
T Consensus 149 ~ia~~~g~~Gp---~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l 198 (216)
T d1tqya1 149 EVAWAVGAEGP---VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI 198 (216)
T ss_dssp HHHHHHTCCSC---EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred HHHHhcCcccc---ceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence 89999999976 688999999999999999999999999999999999753
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=2e-07 Score=83.12 Aligned_cols=119 Identities=14% Similarity=0.066 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCC------CcCEEEEEecCC-----------------------C-----CCCCHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKS------QITHLIFCSLVG-----------------------V-----DMPGADYQLTKM 147 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~------~Id~vi~~s~t~-----------------------~-----~~p~~a~~l~~~ 147 (395)
...+...++.+++.++++..+ .+ .++.++..+ + ..-..+.+|...
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~-g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRV-GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTE-EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCE-EEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence 456888899999999987632 23 445554421 0 011356789999
Q ss_pred cCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccC-----------CCCCCCc
Q 016111 148 LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------TFR-----------GPSDANL 206 (395)
Q Consensus 148 Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~-----------~~~~~~~ 206 (395)
+|+... .+.+..+|++++.||.+|.++|++|..+.+||.++|.... .+. .|.|
T Consensus 150 ~g~~Gp---~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD--- 223 (253)
T d2vbaa1 150 FKIHGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYD--- 223 (253)
T ss_dssp TTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTB---
T ss_pred cCcccc---eeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCC---
Confidence 999986 5788999999999999999999999999999999997531 010 1222
Q ss_pred hhhhhhhhhccccEEEEEecCC
Q 016111 207 GCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
....++++|+||+++||++.+
T Consensus 224 -~~~~G~v~gEGa~~lvLe~le 244 (253)
T d2vbaa1 224 -AHRDGFVIAGGGGMVVVEELE 244 (253)
T ss_dssp -TTCCSBCBBCEEEEEEEEEHH
T ss_pred -CCCCCEeeeeEEEEEEEccHH
Confidence 223488999999999998743
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.29 E-value=9.1e-07 Score=79.28 Aligned_cols=120 Identities=15% Similarity=0.185 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-----cCEEEEEecCC----------------------C----CCC-CHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQ-----ITHLIFCSLVG----------------------V----DMP-GADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~-----Id~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lg 149 (395)
...++..|..+++.+++....+ ...+...+... + ..+ ..+.+|+..||
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4567788888999988865432 22333333311 0 011 35789999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC-----------CCCCCCch
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TFR-----------GPSDANLG 207 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~-----------~~~~~~~~ 207 (395)
++.. .+.+..+|++++.||.+|..+|++|.++.+||.++|.... .+. .|.|
T Consensus 168 l~Gp---~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD---- 240 (270)
T d2ix4a1 168 FQGP---NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFD---- 240 (270)
T ss_dssp CCSC---EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTB----
T ss_pred CCCC---CcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCC----
Confidence 9986 6889999999999999999999999999999999997532 010 1222
Q ss_pred hhhhhhhhccccEEEEEecCC
Q 016111 208 CLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~ 228 (395)
....++++|+||+++||++.+
T Consensus 241 ~~a~G~v~gEGaa~~vLe~l~ 261 (270)
T d2ix4a1 241 CDRDGFVIGEGSGVIVLEEYE 261 (270)
T ss_dssp TTCCSBCBBCEEEEEEEEEHH
T ss_pred CCCCCEeeEeeEEEEEEeeHH
Confidence 223589999999999999754
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.11 E-value=5.2e-06 Score=71.46 Aligned_cols=89 Identities=15% Similarity=0.053 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------V----DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lgl 150 (395)
...|+..|+.+||+++|+++++++ .++++++.+ + ..+ ..+.+|+..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 467999999999999999988765 466666421 0 122 246899999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS 194 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~ 194 (395)
+.. .+.+..+|++++.||..|.++|++| .+.+||.++|..
T Consensus 150 ~Gp---~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 150 RGP---SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp CSS---CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred cce---eeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 986 5789999999999999999999999 899999999964
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.42 E-value=0.00014 Score=62.17 Aligned_cols=154 Identities=15% Similarity=0.152 Sum_probs=92.9
Q ss_pred hhhhhccccEEEEEecCCC---CCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHh
Q 016111 211 GQALFGDGAAALIIGANPD---TTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEA 287 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 287 (395)
.+++.|+|++++||++... .+ ......+.+.+......... ...+++ ....++++++
T Consensus 15 dG~v~gEGa~~~vL~~~~~A~~~g--~~i~a~i~g~~~~~dg~~~~----~~~~~~--------------~~~~~~~~~a 74 (205)
T d1tqya2 15 DGFVLAEGAAMFVLEDYDSALARG--ARIHAEISGYATRCNAYHMT----GLKADG--------------REMAETIRVA 74 (205)
T ss_dssp CCBCEECEEEEEEEEEHHHHHHTT--CCCCEEEEEEEEEECSSCSS----CCCTTC--------------HHHHHHHHHH
T ss_pred CCEeeEeeEEEEEEeEHHHHHHCC--CceEEEEEeeEccccccccC----cccccc--------------cccchhhhhH
Confidence 3899999999999996532 11 11234444433211110000 001111 1234678889
Q ss_pred hccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
|+++++++ +|| ++-.|-.+.+.-+. +.+.++-....++.+ .+-..+||+.+|+-++.|...+.. .++|.+-
T Consensus 75 l~~a~i~~-~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ip 151 (205)
T d1tqya2 75 LDESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA-LEHGVVP 151 (205)
T ss_dssp HHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH-HHHCEEC
T ss_pred HhhhcCCc-cceeeeeccccccccCchhHHHHHHHhhccccCCceee-eecccccccccccchhHHHHHHHH-HhCCeEc
Confidence 99999997 999 99999988777443 445555322222222 145789999999988888766542 1123332
Q ss_pred C-----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 362 T-----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ~-----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
| . .+.++++..+||.|.+.++++|+-
T Consensus 152 p~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~ 198 (205)
T d1tqya2 152 PTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 198 (205)
T ss_dssp CBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEee
Confidence 1 0 012578889999988888898874
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.39 E-value=0.00052 Score=58.02 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=69.3
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
.++|+++|+++++++ +|| ++-.|-.+.+..+. +.+.++-. .++.+ .+-..+||+.+|+-.+.|...+..
T Consensus 65 ~~~i~~aL~~a~i~~-~di~~v~ahgtGt~~~D~~E~~al~~~f~~~--~~~v~-s~K~~~GH~~~AsG~~~li~~~~~- 139 (194)
T d1tqyb2 65 ERAIRLALNDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVT-VPKTTTGRLYSGGGPLDVVTALMS- 139 (194)
T ss_dssp HHHHHHHHHHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEE-CGGGGTCBCGGGHHHHHHHHHHHH-
T ss_pred hhhhhhhcccccccc-cceeeeeccccCcccccHHHhhhhhhhhhcc--ccccc-cccccccccccccccceehhhhhh-
Confidence 357889999999997 999 89999888776554 44556532 22221 135789999999987777765542
Q ss_pred hhcCCccC-----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 355 AEEGKVTT-----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 355 ~~~g~i~~-----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.++|.+-| . ...++++..+||.|.+-++++|+.
T Consensus 140 l~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 140 LREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp HHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred hhhceeccccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 12244321 0 012568899999998888888873
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.26 E-value=0.006 Score=47.02 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=68.4
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
.+++++|+++|++. +|| +|=+|.+-....-...+.|+++.+|+-.+ --.=.+||-.+||-...+-+++.+ +
T Consensus 28 ~Ai~klL~r~gl~~-~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarlv~~l~~~------L 99 (124)
T d1afwa2 28 YAIPKVLEATGLQV-QDIDIFEINEAFAAQALYCIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE------L 99 (124)
T ss_dssp HHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH------S
T ss_pred HHHHHHHHHcCCCc-ccCcEEEeccchhHHHHHHHHHcCCChhhcccc-CccceecCCcCCchHHHHHHHHHH------h
Confidence 57889999999997 999 89899988887778889999999997552 123458999999988888888876 4
Q ss_pred cCCCCCceEEE-EEEccchhhhheeee
Q 016111 361 TTGEGLEWGVM-FGIGAGVTVDTVVLR 386 (395)
Q Consensus 361 ~~G~~~d~vll-~~~G~G~s~~a~ll~ 386 (395)
+.+ .+.+. +..|.|.. .+++++
T Consensus 100 ~~~---~~glas~C~ggG~G-~a~~ie 122 (124)
T d1afwa2 100 KKD---QIGVVSMCIGTGMG-AAAIFI 122 (124)
T ss_dssp CTT---CEEEEEEEETTTEE-EEEEEE
T ss_pred ccC---CEEEEEEcccCCcE-EEEEEE
Confidence 444 44333 33444443 345554
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.19 E-value=0.012 Score=47.01 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-c----CccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML-Y----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~-i----~~~C~~~~~aL~~A~~ 176 (395)
+.....++++++|+++|++++|||.+++... .+..-..++++||++..-. ... + +.++++...+|..|..
T Consensus 46 a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa----~~~i~~~v~~~lgl~~ek~-~~~~~~~~GNt~sasip~~L~~a~~ 120 (148)
T d1u6ea2 46 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQA----NSRINELLVKNLQLRPDAV-VANDIEHTGNTSAASIPLAMAELLT 120 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCS----CHHHHHHHHHHHTCCTTCE-ECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcccccEEEeccc----cHHHHHHHHHhcCCCchhh-hhhhHHhhCCCccchHHHHHHHHHH
Confidence 4555578999999999999999999996432 2335578999999986421 222 1 3345555566655443
Q ss_pred HHHcCCCCeEEEEE
Q 016111 177 FAENNPGARVLVVC 190 (395)
Q Consensus 177 ll~~g~~~~vLvv~ 190 (395)
-=+-.+.+++|+++
T Consensus 121 ~g~i~~Gd~vll~g 134 (148)
T d1u6ea2 121 TGAAKPGDLALLIG 134 (148)
T ss_dssp HTSSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 31122457777776
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.08 E-value=0.0096 Score=47.59 Aligned_cols=84 Identities=18% Similarity=0.065 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++++++|+++|++++|||.+|... ..+.....++++||++..-. ...+ +.+.++...+|..+..--
T Consensus 46 ~~~vp~~i~~~L~~~g~~~~dId~~i~Hq----a~~~~~~~i~~~lgi~~~k~-~~~~~~~Gn~~sasip~~L~~~~~~~ 120 (149)
T d1ub7a2 46 VRVMNTATLEAIEKAGLTPEDIRLFVPHQ----ANLRIIDAARERLGLPWERV-AVNVDRYGNTSTASIPLALKEAVDAG 120 (149)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC----SCHHHHHHHHHTTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhccccccccEEEeec----cchHHHHHHHhhccchhhHH-HHHHHHhcCCcchhHHHHHHHHHHcC
Confidence 34556789999999999999999998643 22345678899999987632 2222 233344444444333321
Q ss_pred HcCCCCeEEEEEe
Q 016111 179 ENNPGARVLVVCS 191 (395)
Q Consensus 179 ~~g~~~~vLvv~~ 191 (395)
+-.+.+++|+++.
T Consensus 121 ~~~~Gd~vll~g~ 133 (149)
T d1ub7a2 121 RIREGDHVLLVSF 133 (149)
T ss_dssp SSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEE
Confidence 1234678888774
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.54 E-value=0.026 Score=44.56 Aligned_cols=85 Identities=15% Similarity=0.031 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
+.....++++++|+++|++++|||.+|.-..+ ......++++||++..-. ...+ +.++++...+|..+..-
T Consensus 42 av~~~~~~i~~~L~~~g~~~~dId~~i~Hq~~----~~~~~~~~~~l~l~~~k~-~~~~~~~GN~~sasip~~L~~~~~~ 116 (143)
T d1hnja2 42 AVTELAHIVDETLAANNLDRSQLDWLVPHQAN----LRIISATAKKLGMSMDNV-VVTLDRHGNTSAASVPCALDEAVRD 116 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECCSC----HHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHhhhcccccceEEeccCc----hHHHHHHHHhCccchhhh-hhhhhhhcccccchHHHHHHHHHHh
Confidence 34455779999999999999999999863322 234578899999987531 2222 34556666666554432
Q ss_pred HHcCCCCeEEEEEe
Q 016111 178 AENNPGARVLVVCS 191 (395)
Q Consensus 178 l~~g~~~~vLvv~~ 191 (395)
=+-.+.+++|+++.
T Consensus 117 ~~~~~Gd~vll~g~ 130 (143)
T d1hnja2 117 GRIKPGQLVLLEAF 130 (143)
T ss_dssp TCSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11124578887763
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=94.91 E-value=0.017 Score=46.70 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=69.8
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH-----HHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI-----EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..++++++|+++|+++ +|| ++-.|-.+.+.-+.+ .+.++-....++.+ .+=..+||+.+|+-.+.|...+..
T Consensus 28 ~~~~i~~Al~~a~i~~-~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~-s~K~~~GH~~~AsG~~~l~~~l~~ 105 (161)
T d1e5ma2 28 ATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVMA 105 (161)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCh-hhcceEEEeccCCcccchHHhhhhhhccccCCCcceEE-ecccccccccccchhhHHHHhHHh
Confidence 4568899999999998 999 999998887765544 34454222222221 135789999999999988876552
Q ss_pred hhhcCCccCC---------------------CCCceEEEEEEccchhhhheeeee
Q 016111 354 SAEEGKVTTG---------------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 354 ~~~~g~i~~G---------------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+++.+-|- ...++++..+||.|.+-++++|+.
T Consensus 106 -~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 106 -IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp -HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred -cccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 112333210 002467889999988878888763
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=94.75 E-value=0.044 Score=43.74 Aligned_cols=82 Identities=16% Similarity=0.045 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-cc-chhH--HHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QG-CYIG--ATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~-C~~~--~~aL~~A~~l 177 (395)
+.....++++++|+++|++++|||.+|+... .+.....++++||++..-.....+. .| |++. ..+|.. +
T Consensus 46 av~~vp~~i~~~L~~~gl~~~dId~~i~Hq~----~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~---~ 118 (153)
T d1mzja2 46 AVADVVPAAREALEVAGLTVGDLVAFVPHQA----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR---L 118 (153)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCEEEEcCC----cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHH---H
Confidence 4455667899999999999999999985332 2345578999999986531111221 23 3333 333433 4
Q ss_pred HHcC---CCCeEEEEE
Q 016111 178 AENN---PGARVLVVC 190 (395)
Q Consensus 178 l~~g---~~~~vLvv~ 190 (395)
++.+ +.+++|+++
T Consensus 119 ~~~~~~~~Gd~ill~~ 134 (153)
T d1mzja2 119 VRSGAVPGGGPALMIG 134 (153)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 357777766
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=94.54 E-value=0.026 Score=43.23 Aligned_cols=70 Identities=17% Similarity=0.085 Sum_probs=53.4
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
.+++++|+++|++. +|+ +|=+|.+-....-...+.|+++.+|+-.+ ---=-+||-.+||--..+-+++.+
T Consensus 26 ~A~~~lL~r~gl~~-~Did~~EinEAFA~q~la~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarl~~tl~~~ 96 (124)
T d1m3ka2 26 PASRKALERAGWKI-GDLDLVEANEAFAAQACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFE 96 (124)
T ss_dssp HHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCh-hcccHHHhcccchhheeeehHhhCCChhhcCCC-CCccccccCcCccchhHHHHHHHH
Confidence 46789999999997 999 88899988777778889999999997552 112347898888866555555443
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=94.44 E-value=0.015 Score=46.88 Aligned_cols=104 Identities=10% Similarity=0.139 Sum_probs=69.7
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH-----HHHcCCCccchh-HHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI-----EAKLGLKQQKLS-ATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i-----~~~lgi~~e~~~-~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
...+++++|+++|+++ +|| ++-.|-.+.+.-+.+ .+.++-...++. .+ .-..+||+.+++-.+.|...+.
T Consensus 28 ~~~~~~~al~~agi~p-~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s--~K~~~GH~~~asG~~~li~~~~ 104 (159)
T d1j3na2 28 AALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSS--TKSMIGHLLGAAGAVEAIATVQ 104 (159)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEEC--THHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHhhccHhhcCCCH-HHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEec--ccccccccccccccchhhhhhh
Confidence 4467889999999998 999 889999887764443 344421111111 12 4578999999999888776554
Q ss_pred hhhhcCCccC--------------------CCCCceEEEEEEccchhhhheeeee
Q 016111 353 KSAEEGKVTT--------------------GEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 353 ~~~~~g~i~~--------------------G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
. .+++.+-+ ..+.+++++-+||.|.+-++++|+.
T Consensus 105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 105 A-LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp H-HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred H-hhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 2 11243311 0112678899999999999999874
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=93.98 E-value=0.046 Score=43.94 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=69.7
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
.++++++|+++|+++ +|| ++-.|-.+.++-+. +.+.++-....++.+ .+=..+||+-+|+-.+.|...+..
T Consensus 29 ~~~~~~al~~a~i~p-~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~Ks~~GH~~~AsG~~~li~~ll~- 105 (161)
T d2gfva2 29 ALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILA- 105 (161)
T ss_dssp HHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHhHhhcccCc-ceEEEEEeecccCcccHHHHHHHHHHHhccccccceec-cccccccccHHHHHHHHHHHHHHH-
Confidence 467889999999998 999 88899888776544 445555322222221 145789999999988888776553
Q ss_pred hhcCCccC----------------------CCCCceEEEEEEccchhhhheeeee
Q 016111 355 AEEGKVTT----------------------GEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 355 ~~~g~i~~----------------------G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+++.+-+ ..+..+.+.-+||.|.+-++++|+.
T Consensus 106 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 106 LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp HHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred hcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 22243321 1112456778899998888888874
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.39 E-value=0.068 Score=42.77 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=67.9
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
.++++++|+++++.+ +|| ++-.|-.+.+.-+. +.+.+|-+ ++.+ .+-..+||+.+++-.+.|...+..
T Consensus 29 ~~~~~~al~~a~l~p-~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~---~~v~-s~Ks~iGH~~~asG~~~l~~~l~~- 102 (158)
T d1ox0a2 29 IKAIKLALEEAEISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGKE---VPVS-STKSFTGHLLGAAGAVEAIVTIEA- 102 (158)
T ss_dssp HHHHHHHHHHHTCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCSS---SEEE-CTHHHHCBCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHhhccccccc-eeeeEEeeeccccccchhHHHHHHHHhcCCc---ccCc-Ccccccccchhhhhhhhhcccccc-
Confidence 468889999999998 999 88899887666443 45566622 2221 146789999999888877765542
Q ss_pred hhcCCccC-----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 355 AEEGKVTT-----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 355 ~~~g~i~~-----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+++.+-+ . .+..+++.-+||.|.+-++++||.
T Consensus 103 l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 103 MRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp HHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 11233221 0 001467888899888888888874
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=91.88 E-value=0.14 Score=38.99 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=50.0
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHH--cCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAK--LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~--lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
.+++++|+++|++. +|+ .|=.|.+-..-.-...+. ++++.+|+-.+ --.=-+||-.+||--..+-+++.+
T Consensus 25 ~A~~~~L~r~gl~~-~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~-GGaIAlGHP~GASGari~~tl~~~ 97 (125)
T d1ulqa2 25 PATRKALERAGLSF-SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHE 97 (125)
T ss_dssp HHHHHHHHHTTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhHhhccCcCc-cccchheeccccchhHHHHHHHhhccCchhhcCCC-CCcccccCCccccchhHHHHHHHH
Confidence 46889999999997 999 888888766544455555 67788887542 122358999888877666665554
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=90.23 E-value=0.12 Score=40.70 Aligned_cols=79 Identities=20% Similarity=0.127 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee-----cCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VML-----YFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~-----i~~~C~~~~~aL~~A~~ll 178 (395)
-...+++++|+++|++++|||.+++-... +..-..++++||++..-.+ ... -|.+.++...+|..+ +
T Consensus 44 ~~~~~i~~~l~~~g~~~~did~~~~Hq~~----~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~---~ 116 (148)
T d1u0ma2 44 PLAPALKELAGEHGWDASDLDFYIVHAGG----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRL---F 116 (148)
T ss_dssp HHHHHHHHHHHTTSCCSSCCSCCEEECSH----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEECCCC----HHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHH---H
Confidence 34578899999999999999988854322 2345788999999876311 111 234555555555444 3
Q ss_pred HcCC---CCeEEEEE
Q 016111 179 ENNP---GARVLVVC 190 (395)
Q Consensus 179 ~~g~---~~~vLvv~ 190 (395)
+.+. .+++|+++
T Consensus 117 ~~~~~~~Gd~ill~g 131 (148)
T d1u0ma2 117 DEGGVEEGARGLLAG 131 (148)
T ss_dssp HSCCCCSSCCCEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 4442 34555555
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=89.23 E-value=0.76 Score=34.72 Aligned_cols=75 Identities=15% Similarity=0.125 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC---------ccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF---------QGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~---------~~C~~~~~aL~~A~~ 176 (395)
-+.|++++|+++|++.+|||++=+.- .+-+.+-..+++||++..- ..++ .||+|.-..+.+++.
T Consensus 24 Pv~A~~~lL~r~gl~~~Did~~EinE----AFA~q~la~~~~l~id~~k---vN~~GGaiAlGHP~GaSGarl~~tl~~~ 96 (124)
T d1m3ka2 24 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSI---VNVNGGAIAIGHPIGASGARILNTLLFE 96 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGG---BSTTCCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhcccHHHhcc----cchhheeeehHhhCCChhh---cCCCCCccccccCcCccchhHHHHHHHH
Confidence 35689999999999999999876422 1223345678889987652 2222 578888888999999
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
|-+.+ .++.|+
T Consensus 97 L~~~~-~~~Gla 107 (124)
T d1m3ka2 97 MKRRG-ARKGLA 107 (124)
T ss_dssp HHHHT-CSEEEE
T ss_pred HHhcC-CCEEEE
Confidence 88765 455554
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=86.75 E-value=0.34 Score=38.48 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=65.3
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
.+++++|+++++.+ +|| ++-.|-.+.+.-+. +.+.++-.. ..++.+ .+-..+||+-+|+-.+.|...+..
T Consensus 28 ~~~~~al~~a~~~~-~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~-s~K~~~GH~~~AsG~~~li~~~l~ 105 (161)
T d2ix4a2 28 LAMTRALRQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILA 105 (161)
T ss_dssp HHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCc-cccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeee-ccccccCCccchHHHHHHHHHHHH
Confidence 57788999999997 999 88899887766544 344454211 111111 135778999999998887764432
Q ss_pred hhhcCCccCC----------------------CCCceEEEEEEccchhhhheeeee
Q 016111 354 SAEEGKVTTG----------------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 354 ~~~~g~i~~G----------------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+++.+.|- ...++++.-+||.|.+-++++|+.
T Consensus 106 -l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 106 -IHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp -HHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred -HhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 111332110 002456777899888888888874
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.82 E-value=0.48 Score=42.86 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS 153 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~ 153 (395)
......++++++|+++|++++|||.+++-. ..+..-..++++||++..
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~i~Hq----~~~~i~~~i~~~Lgl~~e 311 (372)
T d1teda_ 264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHP----GGPKIIEQSVRSLGISAE 311 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECC----SCHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhhhhhccC----ccHHHHHHHHHHcCCCHH
Confidence 456677889999999999999999988632 122345678999999875
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=84.99 E-value=0.4 Score=36.59 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=47.3
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCC---CccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGL---KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi---~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
.+++++|+++||+. +|+ +|=.|.+.....-.+.+.+++ +.||+-.+ ---=-+||-.+||-...+-+++.+
T Consensus 27 ~A~~klL~ragl~~-~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~-GGaiAlGHP~GASGaRlv~~l~~~ 100 (128)
T d1wdkc2 27 PATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNV 100 (128)
T ss_dssp HHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCccc-cccceEEeecccchhhhhhhhhcccccCCcceecCC-CCcccccccccccchhHHHHHHHH
Confidence 46788999999997 999 888888776655555566554 44555331 112347898888876666655554
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=83.08 E-value=1.1 Score=36.67 Aligned_cols=86 Identities=6% Similarity=0.089 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC----hHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 276 VSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG----PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 276 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~----~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
..+...++++++|+++|+++ +|| ++|+.... +..--.+.++||++.+-... ...|+++++.+..|..+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~-~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~------~i~~~gC~g~~~al~~A 147 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLA-TDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI------PIAQLGCAAGGAAINRA 147 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE------EECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCh-hhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe------ccccchhhHHHHHHHHH
Confidence 34555678999999999998 999 66544322 23445678899987643221 23577888888777765
Q ss_pred HHhhhhcCCccCCCCCceEEEEEEc
Q 016111 351 RRKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 351 ~~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
..- .+.| +. .++|+++.-
T Consensus 148 ~~~-l~~~---~~---~~vLvv~~e 165 (200)
T d1u0ma1 148 HDF-CTAY---PE---ANALIVACE 165 (200)
T ss_dssp HHH-HHHS---TT---CEEEEEEEE
T ss_pred HHH-HHhC---CC---CEEEEEEEe
Confidence 442 1112 23 678877753
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=81.24 E-value=3.5 Score=31.83 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=64.3
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
.++++++++.+ + .+| ++-.|-.+.+.-+. +.+.+|-..-.+. + +-..+||+.+|+-.+.|...+..
T Consensus 25 ~~~~~~al~~a---~-~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~-s--~K~~~GH~~~asG~~~l~~~~~~- 96 (151)
T d2vbaa2 25 VRCMKMAMHGV---D-TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAIS-A--TKAMTGHSLGAAGVQEAIYSLLM- 96 (151)
T ss_dssp HHHHHHHHTTC---C-SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEE-C--THHHHCBCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHhhhcC---c-ccceeEEEeccCCccccHHHHHHHHHHhCCCCcccc-c--chhhccccccchhhhhhhHHHHH-
Confidence 35677777665 3 567 88899888766444 4566763222222 2 46789999999988888776553
Q ss_pred hhcCCccC------------C---------CCCceEEEEEEccchhhhheeeee
Q 016111 355 AEEGKVTT------------G---------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 355 ~~~g~i~~------------G---------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.+++.+-| + .+.+.++..+||.|.+-++++||.
T Consensus 97 l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 97 LEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 11232211 0 012467888999999999999874
|