Citrus Sinensis ID: 016153
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 394 | ||||||
| 255587744 | 513 | Endoplasmic oxidoreductin-1 precursor, p | 0.918 | 0.705 | 0.804 | 1e-176 | |
| 356530543 | 465 | PREDICTED: endoplasmic oxidoreductin-2-l | 0.911 | 0.772 | 0.807 | 1e-173 | |
| 356556515 | 465 | PREDICTED: endoplasmic oxidoreductin-2-l | 0.916 | 0.776 | 0.795 | 1e-172 | |
| 359483898 | 487 | PREDICTED: endoplasmic oxidoreductin-1-l | 0.883 | 0.714 | 0.774 | 1e-167 | |
| 297740752 | 499 | unnamed protein product [Vitis vinifera] | 0.883 | 0.697 | 0.774 | 1e-167 | |
| 449433609 | 469 | PREDICTED: endoplasmic oxidoreductin-1-l | 0.893 | 0.750 | 0.782 | 1e-167 | |
| 449530012 | 458 | PREDICTED: endoplasmic oxidoreductin-1-l | 0.893 | 0.768 | 0.782 | 1e-167 | |
| 357450507 | 464 | Endoplasmic oxidoreductin-1 [Medicago tr | 0.878 | 0.745 | 0.790 | 1e-164 | |
| 224056607 | 481 | predicted protein [Populus trichocarpa] | 0.921 | 0.754 | 0.737 | 1e-163 | |
| 147841803 | 589 | hypothetical protein VITISV_002206 [Viti | 0.827 | 0.553 | 0.766 | 1e-160 |
| >gi|255587744|ref|XP_002534381.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] gi|223525406|gb|EEF28005.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/368 (80%), Positives = 331/368 (89%), Gaps = 6/368 (1%)
Query: 1 MVEPEAEKKKKGTSYKT-RWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQE 59
MV E EKKK+ + K RW +++GA+IA++ A A ++ +PN++ F ++SC C Q
Sbjct: 1 MVGSEPEKKKRNSEGKQWRW-VVIGAIIALIFAFTTA-SITTPNINLFGQPNESCSCPQ- 57
Query: 60 KDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCR 119
KYSG+VEDCCCDYETV++LNE+VLHPSLQ+LVKTPFFRYFKVKLWCDCPFWPDDGMCR
Sbjct: 58 --KYSGMVEDCCCDYETVDRLNEEVLHPSLQDLVKTPFFRYFKVKLWCDCPFWPDDGMCR 115
Query: 120 LRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP 179
LRDCSVCECPE EFPESF+ PF GL SD+L CQEGKP+AAVDRTLDS+AFRGWTE DNP
Sbjct: 116 LRDCSVCECPEGEFPESFRTPFRGGLPSDNLLCQEGKPQAAVDRTLDSKAFRGWTEIDNP 175
Query: 180 WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILY 239
WT+DDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDA+YSENCP YPS++LCQEERILY
Sbjct: 176 WTNDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPRYPSEELCQEERILY 235
Query: 240 KLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVT 299
KLISGLHSSISIHIAADYLLDE+ NLWGQNLTLMYDRVLRYPDRVRNLYF+FLFVLRAVT
Sbjct: 236 KLISGLHSSISIHIAADYLLDESKNLWGQNLTLMYDRVLRYPDRVRNLYFSFLFVLRAVT 295
Query: 300 KAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQK 359
KAAEYLEQAEY+TGNP EDL+T SLM+QLLYN +LQAACPLPFDEAKLWKGQRGPELKQK
Sbjct: 296 KAAEYLEQAEYDTGNPTEDLRTHSLMRQLLYNSKLQAACPLPFDEAKLWKGQRGPELKQK 355
Query: 360 IQGQFRNI 367
IQ +FRNI
Sbjct: 356 IQERFRNI 363
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530543|ref|XP_003533840.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356556515|ref|XP_003546570.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359483898|ref|XP_002271644.2| PREDICTED: endoplasmic oxidoreductin-1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297740752|emb|CBI30934.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449433609|ref|XP_004134590.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449530012|ref|XP_004171991.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357450507|ref|XP_003595530.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] gi|355484578|gb|AES65781.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224056607|ref|XP_002298934.1| predicted protein [Populus trichocarpa] gi|222846192|gb|EEE83739.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147841803|emb|CAN62205.1| hypothetical protein VITISV_002206 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 394 | ||||||
| TAIR|locus:2207031 | 469 | ERO1 "endoplasmic reticulum ox | 0.908 | 0.763 | 0.669 | 3.5e-139 | |
| ZFIN|ZDB-GENE-060929-744 | 488 | zgc:153032 "zgc:153032" [Danio | 0.451 | 0.364 | 0.398 | 4.7e-50 | |
| UNIPROTKB|E1C917 | 467 | ERO1LB "Uncharacterized protei | 0.403 | 0.340 | 0.416 | 2.9e-48 | |
| UNIPROTKB|F8WFP9 | 464 | Ero1l "ERO1-like protein alpha | 0.428 | 0.364 | 0.384 | 3.7e-48 | |
| UNIPROTKB|E1C0W7 | 463 | ERO1L "Uncharacterized protein | 0.449 | 0.382 | 0.373 | 4.7e-48 | |
| UNIPROTKB|E1C542 | 463 | ERO1L "Uncharacterized protein | 0.449 | 0.382 | 0.373 | 4.7e-48 | |
| RGD|621713 | 464 | Ero1l "ERO1-like (S. cerevisia | 0.428 | 0.364 | 0.384 | 9.8e-48 | |
| UNIPROTKB|Q96HE7 | 468 | ERO1L "ERO1-like protein alpha | 0.428 | 0.361 | 0.382 | 2e-47 | |
| MGI|MGI:1354385 | 464 | Ero1l "ERO1-like (S. cerevisia | 0.428 | 0.364 | 0.379 | 3.3e-47 | |
| UNIPROTKB|B6CVD7 | 468 | ERO1L "ERO1-like protein alpha | 0.428 | 0.361 | 0.377 | 5.3e-47 |
| TAIR|locus:2207031 ERO1 "endoplasmic reticulum oxidoreductins 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
Identities = 245/366 (66%), Positives = 284/366 (77%)
Query: 3 EPEAEKKKKGTSYKTRWSXXXXXXXXXXXXXXXXXXXKSPNLSHFAPADKSCHCAQEKD- 61
E E+EKK+K RW + N+ F SC C+ +K
Sbjct: 8 EEESEKKRK----TWRWPLATLVVVFLAVAVSSRT---NSNVGFFFSDRNSCSCSLQKTG 60
Query: 62 KYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLR 121
KY G++EDCCCDYETV+ LN +VL+P LQ+LV TPFFRY+KVKLWCDCPFWPDDGMCRLR
Sbjct: 61 KYKGMIEDCCCDYETVDNLNTEVLNPLLQDLVTTPFFRYYKVKLWCDCPFWPDDGMCRLR 120
Query: 122 DCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWT 181
DCSVCECPE EFPE FKKPF+ GL SDDL CQEGKP+ AVDRT+D++AFRGW ET NPWT
Sbjct: 121 DCSVCECPENEFPEPFKKPFVPGLPSDDLKCQEGKPQGAVDRTIDNRAFRGWVETKNPWT 180
Query: 182 HDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKX 241
HDD+TD+ EM+YVNLQLNPERYTGYTGPSARRIWD+IYSENCP Y S + C E+++LYK
Sbjct: 181 HDDDTDSGEMSYVNLQLNPERYTGYTGPSARRIWDSIYSENCPKYSSGETCPEKKVLYKL 240
Query: 242 XXXXXXXXXXXXAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKA 301
AADYLLDE+ N WGQN+ LMYDR+LR+PDRVRN+YFT+LFVLRAVTKA
Sbjct: 241 ISGLHSSISMHIAADYLLDESRNQWGQNIELMYDRILRHPDRVRNMYFTYLFVLRAVTKA 300
Query: 302 AEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQ 361
YLEQAEY+TGN EDLKTQSL+KQLLY+P+LQ ACP+PFDEAKLW+GQ GPELKQ+IQ
Sbjct: 301 TAYLEQAEYDTGNHAEDLKTQSLIKQLLYSPKLQTACPVPFDEAKLWQGQSGPELKQQIQ 360
Query: 362 GQFRNI 367
QFRNI
Sbjct: 361 KQFRNI 366
|
|
| ZFIN|ZDB-GENE-060929-744 zgc:153032 "zgc:153032" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C917 ERO1LB "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F8WFP9 Ero1l "ERO1-like protein alpha" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C0W7 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C542 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|621713 Ero1l "ERO1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96HE7 ERO1L "ERO1-like protein alpha" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1354385 Ero1l "ERO1-like (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B6CVD7 ERO1L "ERO1-like protein alpha" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.I.5241.1 | hypothetical protein (438 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 394 | |||
| pfam04137 | 348 | pfam04137, ERO1, Endoplasmic Reticulum Oxidoreduct | 1e-121 | |
| COG5061 | 425 | COG5061, ERO1, Oxidoreductin, endoplasmic reticulu | 2e-39 |
| >gnl|CDD|217920 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | Back alignment and domain information |
|---|
Score = 354 bits (910), Expect = e-121
Identities = 135/291 (46%), Positives = 183/291 (62%), Gaps = 14/291 (4%)
Query: 83 QVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDD-GMCRLRDCSVCECPETEFPESFKKPF 141
+ + P L L T FFRYFKV L +CPFWPDD G+C R C+VC C E+E PE +K
Sbjct: 1 EKIRPLLNSLTSTDFFRYFKVNLDKECPFWPDDNGLCGSRACAVCTCDESEIPEVWKPSE 60
Query: 142 IRGLSSDDLACQEGKPEAAVDRTL-DSQAFRGWTETDNP--WTHDDETDNAEMTYVNLQL 198
+ + AC+EGK +D +L D +A W +TD+ + D+ D+ + YV+L L
Sbjct: 61 L-----EGSACKEGKDFGELDCSLSDCRASCKWKDTDDLDDYCVVDDEDSDKGVYVDLLL 115
Query: 199 NPERYTGYTGPSARRIWDAIYSENCPTY--PSKQLCQEERILYKLISGLHSSISIHIAAD 256
NPER+TGY GPSA RIW AIY ENC C E+R+ Y+LISGLH+SIS H++AD
Sbjct: 116 NPERFTGYKGPSAARIWRAIYEENCFPIGKVDNTCCLEKRVFYRLISGLHASISTHLSAD 175
Query: 257 YLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPM 316
YL D+ WG NL L ++RV +PDR+RNLYFT+ VLRA+ K YLE + TGN +
Sbjct: 176 YLNDK-TGKWGPNLELFFERVGNHPDRLRNLYFTYALVLRALAKLKPYLENFTFNTGNDL 234
Query: 317 EDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNI 367
ED +T+ L+K LL +L ++ P FDE L+K +LK++ + +FRNI
Sbjct: 235 EDTETKLLLKDLLS--ELNSSSPKHFDENLLFKNDEAIKLKEEFRRRFRNI 283
|
Members of this family are required for the formation of disulphide bonds in the ER. Length = 348 |
| >gnl|CDD|227393 COG5061, ERO1, Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 394 | |||
| KOG2608 | 469 | consensus Endoplasmic reticulum membrane-associate | 100.0 | |
| PF04137 | 357 | ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 100.0 | |
| COG5061 | 425 | ERO1 Oxidoreductin, endoplasmic reticulum membrane | 100.0 |
| >KOG2608 consensus Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-115 Score=874.85 Aligned_cols=340 Identities=47% Similarity=0.851 Sum_probs=309.5
Q ss_pred CchHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccccCCCccccccccCccccHHhHHHhhhhhhhHhHHHhhcCC
Q 016153 17 TRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTP 96 (394)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~G~v~dc~c~~etId~~N~~~l~p~L~~Lv~td 96 (394)
+||.++++++.++.+++.++. .+.. ..|||+ +.|+|+||+||++||+++|+++|+|+|+.|+++|
T Consensus 2 ~r~~~l~~l~~~~~l~~~v~~--------~~~~--~~~~ck-----~~~~i~dc~c~~~~i~nln~~~i~~~lq~l~ksd 66 (469)
T KOG2608|consen 2 KRAIALLGLIAAVKLISVVNT--------QFAS--SICFCK-----VDGIIEDCTCDYETIDNLNNEVIYPLLQKLLKSD 66 (469)
T ss_pred chhHHHHHHHHHHHHHHhccc--------cccc--cceeee-----cccccccCCCCHHHHHHhhccccchHHHHHhccc
Confidence 458888888888888887742 1222 689999 7899999999999999999999999999999999
Q ss_pred CceeEeecCCCCCCCCCCCCCCCCCCCccccCCCCCCCcCCCcccccCCCC-CchhhhcCCC-ccccccccchhhhcCcc
Q 016153 97 FFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSS-DDLACQEGKP-EAAVDRTLDSQAFRGWT 174 (394)
Q Consensus 97 fFRyfKVNL~k~CPFW~dd~~C~~~~C~V~~cde~eiPe~wr~~~~~~~~~-~~~~c~~~~~-~~~vd~tl~~~~~~~w~ 174 (394)
|||||||||+++||||+|+++|++++|+|++|+|++||++|+++ +++++. .-..|..+.+ .+++|++++.++|..|.
T Consensus 67 ffryYkvnL~~~CpFW~Dd~~C~~r~C~V~~c~e~evPe~~k~~-~~~~~~~~~~e~~~~~~~~~~~d~tl~dr~f~~w~ 145 (469)
T KOG2608|consen 67 FFRYYKVNLYRDCPFWPDDGMCLNRACSVEPCPEDEVPEGWKKS-LGKYEPELCSECEDADSELGAKDRTLSDRAFLLWD 145 (469)
T ss_pred chhheeccccCCCCCCCchhhhhhcCCccccCcccccchhhhhh-hhccChhhhhhhhhccccccchhcccccccccccc
Confidence 99999999999999999999999999999999999999999994 344544 2245555655 78899999999999999
Q ss_pred ccCCC-CCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCCCC------------CcchhhHHHHHHHH
Q 016153 175 ETDNP-WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYP------------SKQLCQEERILYKL 241 (394)
Q Consensus 175 ~~d~~-~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~~~------------~~~~ClEkrvFYRL 241 (394)
.+|+. ||+.|++++++++||||++||||||||+|++|+|||++||+||||++. .+++|+||||||||
T Consensus 146 ~~d~~~~C~~dd~~s~~~~YVdLl~NPERyTGY~G~sa~rIW~sIYeeNCf~~~~~~~~~~~~~~~l~g~clEkrvfYrL 225 (469)
T KOG2608|consen 146 KHDDLSFCEVDDEESPEMVYVDLLLNPERYTGYKGPSAARIWRSIYEENCFKPDPLFDPNSIPYNWLEGLCLEKRVFYRL 225 (469)
T ss_pred ccCCccceeecCCCCCCcEEEehhcChhhhcCCCCCCHHHHHHHHHHhhCCCCCcccCCcccccchhccccHHHHHHHHH
Confidence 99998 999998889999999999999999999999999999999999999875 15899999999999
Q ss_pred hhhhhHHHHHHHHhhhccccccCccCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhhccCCCCccccHHH
Q 016153 242 ISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKT 321 (394)
Q Consensus 242 ISGLHaSIsiHl~~~Yl~d~~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f~tG~~~eD~~t 321 (394)
||||||||+||||++|++-+.+..||||+++|++||++||+||+||||+|++|+|||.||+|||++.+|+||+..||++|
T Consensus 226 ISGlHsSIstHl~~~~y~~~e~~~WgpNl~~f~~Rf~~~P~Rl~NlYF~Yll~lrAl~Ki~pyl~~~~~~tgn~~eD~e~ 305 (469)
T KOG2608|consen 226 ISGLHSSISTHLCSFYYLLEETKRWGPNLDLFRARFGNGPDRLRNLYFTYLLVLRALGKIAPYLEELDFYTGNVEEDAET 305 (469)
T ss_pred HHHHHHHHHHHHhhhhcCCCcccccCcCHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhcchhhhhhhcccccccchHH
Confidence 99999999999999666434343799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccccCCCCCCcccCCCCC-CCChhHHHHHhhcccccccccccc
Q 016153 322 QSLMKQLLYNPQLQAACPLPFDEAKLWKGQ-RGPELKQKIQGQFRNIRLCSNPSR 375 (394)
Q Consensus 322 ~~lv~~Ll~~~~~~~~cp~~FDE~~lF~~~-~a~~LKeeFr~~FrNISrIMD~~~ 375 (394)
+.+|.++++.++ +||.||||+.||+|+ .|++||||||+|||||||||||||
T Consensus 306 k~~i~~il~~i~---~~p~hFdE~~~f~gd~~a~~lKe~fr~hFrnISrIMDCVg 357 (469)
T KOG2608|consen 306 KSLLSDILSQIK---AFPKHFDEAELFAGDSEAPALKEEFRKHFRNISRIMDCVG 357 (469)
T ss_pred HHHHHHHHHHHh---hCccccchHhhhcccccchhHHHHHHHHHHHHHHHHhhcC
Confidence 999999999865 699999999999999 789999999999999999999997
|
|
| >PF04137 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1); InterPro: IPR007266 Members of this family are required for the formation of disulphide bonds in the endoplasmic reticulum [, ] | Back alignment and domain information |
|---|
| >COG5061 ERO1 Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 394 | ||||
| 3ahq_A | 465 | Hyperactive Human Ero1 Length = 465 | 4e-43 | ||
| 3ahr_A | 465 | Inactive Human Ero1 Length = 465 | 5e-43 | ||
| 3nvj_A | 393 | Crystal Structure Of The C143aC166A MUTANT OF ERO1P | 5e-23 | ||
| 3m31_A | 388 | Structure Of The C150aC295A MUTANT OF S. CEREVISIAE | 2e-22 | ||
| 1rq1_A | 386 | Structure Of Ero1p, Source Of Disulfide Bonds For O | 2e-22 | ||
| 1rp4_A | 389 | Structure Of Ero1p, Source Of Disulfide Bonds For O | 3e-21 |
| >pdb|3AHQ|A Chain A, Hyperactive Human Ero1 Length = 465 | Back alignment and structure |
|
| >pdb|3AHR|A Chain A, Inactive Human Ero1 Length = 465 | Back alignment and structure |
| >pdb|3NVJ|A Chain A, Crystal Structure Of The C143aC166A MUTANT OF ERO1P Length = 393 | Back alignment and structure |
| >pdb|3M31|A Chain A, Structure Of The C150aC295A MUTANT OF S. CEREVISIAE ERO1P Length = 388 | Back alignment and structure |
| >pdb|1RQ1|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 386 | Back alignment and structure |
| >pdb|1RP4|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 389 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 394 | |||
| 3ahq_A | 465 | ERO1-like protein alpha; disulfide bond, PDI, redo | 1e-117 | |
| 3m31_A | 388 | Endoplasmic oxidoreductin-1; disulfide mutant, dis | 1e-107 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Length = 465 | Back alignment and structure |
|---|
Score = 349 bits (896), Expect = e-117
Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 51/372 (13%)
Query: 41 SPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRY 100
+ P + C + SG ++DC CD ET+++ N L P LQ+L+++ +FRY
Sbjct: 17 GRHGEEQPPETAAQRCFC---QVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRY 73
Query: 101 FKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLA---CQEGKP 157
+KV L CPFW D C RDC+V E P+ K + + ++ +
Sbjct: 74 YKVNLKRPCPFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAER 133
Query: 158 EAAVDRTLDSQ---AFRGWTETDNPWT---HDDETDNAEMTYVNLQLNPERYTGYTGPSA 211
AVD +L + A WT+ D+ D+ + E YV+L LNPERYTGY GP A
Sbjct: 134 LGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDA 193
Query: 212 RRIWDAIYSENCPTYPSKQ------------------------LCQEERILYKLISGLHS 247
+IW+ IY ENC + + LC E+R Y+LISGLH+
Sbjct: 194 WKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHA 253
Query: 248 SISIHIAADYLLDEA--NNLWGQNLTLMYDRVLR------YPDRVRNLYFTFLFVLRAVT 299
SI++H++A YLL E WG N+T R P R++NLYF +L LRA++
Sbjct: 254 SINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALS 313
Query: 300 KAAEYLEQAEYE--TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPE 355
K + E+ +++ TGN ++D + + L+ ++L + PL FDE + G + +
Sbjct: 314 KVLPFFERPDFQLFTGNKIQDEENKMLLLEIL---HEIKSFPLHFDENSFFAGDKKEAHK 370
Query: 356 LKQKIQGQFRNI 367
LK+ + FRNI
Sbjct: 371 LKEDFRLHFRNI 382
|
| >3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} PDB: 1rp4_A* 1rq1_A* 3nvj_A* Length = 388 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 394 | |||
| 3ahq_A | 465 | ERO1-like protein alpha; disulfide bond, PDI, redo | 100.0 | |
| 3m31_A | 388 | Endoplasmic oxidoreductin-1; disulfide mutant, dis | 100.0 |
| >3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-116 Score=898.52 Aligned_cols=318 Identities=39% Similarity=0.751 Sum_probs=248.2
Q ss_pred CCCCcccccCCCccccccccCccccHHhHHHhhhhhhhHhHHHhhcCCCceeEeecCCCCCCCCCCCCCCCCCCCccccC
Q 016153 49 PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCEC 128 (394)
Q Consensus 49 ~~~~~c~c~~~~~~~~G~v~dc~c~~etId~~N~~~l~p~L~~Lv~tdfFRyfKVNL~k~CPFW~dd~~C~~~~C~V~~c 128 (394)
++.+.|||+ ++|+|+||||+|+|||++|+..|+|+|++|+++||||||||||+++||||+++++|++++|+|++|
T Consensus 27 ~~~~~c~c~-----~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V~~c 101 (465)
T 3ahq_A 27 TAAQRCFCQ-----VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPA 101 (465)
T ss_dssp ----CEEEE-----CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC---------------
T ss_pred CCCCCcccC-----CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCeeecC
Confidence 567789999 999999999999999999997899999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCcccccCCCCC----chhhhcCCCccccccccch---hhhcCccccCCC---CCCCCCCCCCcceEeeCCC
Q 016153 129 PETEFPESFKKPFIRGLSSD----DLACQEGKPEAAVDRTLDS---QAFRGWTETDNP---WTHDDETDNAEMTYVNLQL 198 (394)
Q Consensus 129 de~eiPe~wr~~~~~~~~~~----~~~c~~~~~~~~vd~tl~~---~~~~~w~~~d~~---~~~~De~~~~~~~YVDLl~ 198 (394)
+|+|||++||++.. +++.. ...|++...++.||++++. ..+.+|..+|++ +|..||+++++++||||++
T Consensus 102 ~e~eiP~~wr~~~~-~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdLl~ 180 (465)
T 3ahq_A 102 QSDEVPDGIKSASY-KYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLL 180 (465)
T ss_dssp ----------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEGGG
T ss_pred CcccCChhhccccc-ccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEeccc
Confidence 99999999998653 23221 1357666667889998874 578899887753 5655555678999999999
Q ss_pred CCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------cchhhHHHHHHHHhhhhhHHHHHHHH
Q 016153 199 NPERYTGYTGPSARRIWDAIYSENCPTYPS------------------------KQLCQEERILYKLISGLHSSISIHIA 254 (394)
Q Consensus 199 NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~ClEkrvFYRLISGLHaSIsiHl~ 254 (394)
||||||||+|++|+|||++||+||||++.+ +++|+|||||||||||||||||||||
T Consensus 181 NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~Hl~ 260 (465)
T 3ahq_A 181 NPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLS 260 (465)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998542 68999999999999999999999999
Q ss_pred hhhcccc--ccCccCCCHHHHHHHh------hccccchhhHHHHHHHHHHHHHHHHHhhhhhcc--CCCCccccHHHHHH
Q 016153 255 ADYLLDE--ANNLWGQNLTLMYDRV------LRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEY--ETGNPMEDLKTQSL 324 (394)
Q Consensus 255 ~~Yl~d~--~~~~W~pNl~~F~~Rv------~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f--~tG~~~eD~~t~~l 324 (394)
++|+++. .+++|+||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +|||..+|++|+++
T Consensus 261 ~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk~~ 340 (465)
T 3ahq_A 261 ARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKML 340 (465)
T ss_dssp HTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHHHH
T ss_pred HHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHHHH
Confidence 9999754 2789999999999997 578999999999999999999999999997666 99999999999999
Q ss_pred HHHHhcCccccccCCCCCCcccCCCCC--CCChhHHHHHhhcccccccccccc
Q 016153 325 MKQLLYNPQLQAACPLPFDEAKLWKGQ--RGPELKQKIQGQFRNIRLCSNPSR 375 (394)
Q Consensus 325 v~~Ll~~~~~~~~cp~~FDE~~lF~~~--~a~~LKeeFr~~FrNISrIMD~~~ 375 (394)
|++||+.. .+||.+|||+.||+|. .+.+||+|||+|||||||||||||
T Consensus 341 l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVg 390 (465)
T 3ahq_A 341 LLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVG 390 (465)
T ss_dssp HHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCc
Confidence 99999874 3799999999999984 688999999999999999999997
|
| >3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 394 | ||||
| d1rp4a_ | 374 | a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p | 1e-114 |
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 374 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 336 bits (862), Expect = e-114
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 74 YETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFW-PDDGMCRLRDCSVCECPETE 132
+ +N +NE + L L+K+ FF+YF++ L+ C FW +DG+C R CSV + +
Sbjct: 3 FNELNAINENI-RDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 61
Query: 133 -FPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP--WTHDDETDNA 189
PE ++ + ++D + + + Q + + ++ + ++ +
Sbjct: 62 TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGK 121
Query: 190 EMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSI 249
++L NPER+TGY G A +IW IY +NC T + Y+L+SG H+SI
Sbjct: 122 NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASI 181
Query: 250 SIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAE 309
H++ +YL + W NL L R+ +PDRV N+YF + V +A+ K YL +
Sbjct: 182 GTHLSKEYLNTKTGK-WEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240
Query: 310 YETGNPMED-LKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNI 367
+ E K +++ QL F+E ++ LK + + +F+N+
Sbjct: 241 FCDLVNKEIKNKMDNVISQL---------DTKIFNEDLVFANDLSLTLKDEFRSRFKNV 290
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 394 | |||
| d1rp4a_ | 374 | Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast | 100.0 |
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-100 Score=763.90 Aligned_cols=291 Identities=26% Similarity=0.562 Sum_probs=248.1
Q ss_pred cHHhHHHhhhhhhhHhHHHhhcCCCceeEeecCCCCCCCCC-CCCCCCCCCCccccCCC-CCCCcCCCcccccCCCCCch
Q 016153 73 DYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWP-DDGMCRLRDCSVCECPE-TEFPESFKKPFIRGLSSDDL 150 (394)
Q Consensus 73 ~~etId~~N~~~l~p~L~~Lv~tdfFRyfKVNL~k~CPFW~-dd~~C~~~~C~V~~cde-~eiPe~wr~~~~~~~~~~~~ 150 (394)
+|+|||++|++ |+|+|++|+++||||||||||+++||||. ++++|++++|+|++|++ ++||+.||++..+++..+..
T Consensus 2 s~~~vd~~N~~-i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~ 80 (374)
T d1rp4a_ 2 SFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM 80 (374)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred CHHHHHHHHHH-HHHHHHHhcCCCceeeeecCCCCCCCCCCccccCcCCCCCCCccCCccccCccccccccccccccchh
Confidence 79999999997 79999999999999999999999999995 67999999999999975 67999999887666654321
Q ss_pred hhhcCCC--ccccccccchhhhcCccccCC--CCCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCCC
Q 016153 151 ACQEGKP--EAAVDRTLDSQAFRGWTETDN--PWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTY 226 (394)
Q Consensus 151 ~c~~~~~--~~~vd~tl~~~~~~~w~~~d~--~~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~~ 226 (394)
....... ....|.. ......|...++ .||..||+++++++||||++||||||||+|++|+|||++||+||||++
T Consensus 81 ~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~ 158 (374)
T d1rp4a_ 81 KEADDSDDECKFLDQL--CQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTI 158 (374)
T ss_dssp EECCTTCGGGSBHHHH--SSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCT
T ss_pred hhccccccchhhcchh--hhhhccccccccccccccccccCCCCceEeehhhCcccccCCCCCcHHHHHHHHHHHhCCCC
Confidence 1111000 0011110 012233433333 366656667889999999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHhhhhhHHHHHHHHhhhccccccCccCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhh
Q 016153 227 PSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLE 306 (394)
Q Consensus 227 ~~~~~ClEkrvFYRLISGLHaSIsiHl~~~Yl~d~~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~ 306 (394)
+..++|+|||+|||||||||||||||||++|++ +.++.|+||+++|++|||+||+||+||||+|++|||||+||+|||.
T Consensus 159 ~~~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~-~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~ 237 (374)
T d1rp4a_ 159 GETGESLAKDAFYRLVSGFHASIGTHLSKEYLN-TKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLP 237 (374)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEEE-TTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCcCccCCCHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999985 5688999999999999999999999999999999999999999999
Q ss_pred hhccCCCCccccHHHHHHHHHHhcCccccccCCCCCCcccCCCCCCCChhHHHHHhhcccccccccccc
Q 016153 307 QAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSR 375 (394)
Q Consensus 307 ~~~f~tG~~~eD~~t~~lv~~Ll~~~~~~~~cp~~FDE~~lF~~~~a~~LKeeFr~~FrNISrIMD~~~ 375 (394)
+++|+++ +|.+++..++.|++. .||.+|||+.||+++.+.+||+|||.||||||||||||+
T Consensus 238 ~~~~~~~---~~~~~~~~~~~l~~~-----~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~ 298 (374)
T d1rp4a_ 238 EFSFCDL---VNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQ 298 (374)
T ss_dssp CCSTTSS---TTTTHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCC
T ss_pred hcCCCCC---CCHHHHHHHHHHHHH-----hccccCCHHHhcCCcchHHHHHHHHHHHHHHHHHHcccC
Confidence 9999987 456677778888864 367899999999999999999999999999999999997
|