Citrus Sinensis ID: 016153


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MVEPEAEKKKKGTSYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
cccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHccccEEEEEcccc
ccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEccccccHHHHHHHcHHcccHHHHHHHHcccEEEEEEEcccccccccccccccccccccccccHHHccccccHHHHcccccccHHHHcccccccccccccHHHHcccccccccccccccccccccEEEEccccccHccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEEccccHcHHHHHcccc
mvepeaekkkkgtsyKTRWSLLVGALIAILIAVALAYAlkspnlshfapadkschcaqekdkysgvvedcccdyetvnQLNEQVlhpslqelvktpffRYFKVKlwcdcpfwpddgmcrlrdcsvcecpetefpesfkkpfirglssddlacqegkpeaavdrtldsqafrgwtetdnpwthddetdnaeMTYVNLqlnperytgytgpsarRIWDAiysencptypskqlcQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQaeyetgnpmedlkTQSLMKQLlynpqlqaacplpfdeaklwkgqrgpelkQKIQGQFrnirlcsnpsrlivdlsynvdffffqmikp
mvepeaekkkkgtsyktRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEtefpesfkkpfIRGLSSDDLACQEGkpeaavdrtldsqafrgwtetdnpwthddetdNAEMTYVNLqlnperytgytgPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQaeyetgnpmEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
MVEPEAEKKKKGTSYKTRWSllvgaliailiavalayalKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKlisglhssisihiAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
**************YKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGL***********************AFRGWTET***W********AEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYE***********SLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMI**
******************WSLLVGALIAILIAVALAYALKSPNLS***PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPF*************************SQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNP***********RRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
**************YKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
*************SYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDD**C*****EAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVEPEAEKKKKGTSYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSRLIVDLSYNVDFFFFQMIKP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
Q9C7S7469 Endoplasmic oxidoreductin yes no 0.824 0.692 0.763 1e-155
Q7X9I4472 Endoplasmic oxidoreductin no no 0.895 0.747 0.736 1e-154
A5PJN2468 ERO1-like protein alpha O yes no 0.845 0.711 0.345 5e-54
B6CVD7468 ERO1-like protein alpha O yes no 0.837 0.705 0.350 2e-52
Q96HE7468 ERO1-like protein alpha O yes no 0.842 0.709 0.346 4e-52
Q86YB8467 ERO1-like protein beta OS no no 0.761 0.642 0.359 6e-52
Q8R4A1464 ERO1-like protein alpha O yes no 0.786 0.668 0.356 8e-52
Q8R2E9467 ERO1-like protein beta OS yes no 0.766 0.646 0.353 1e-51
Q6DD71465 ERO1-like protein alpha O N/A no 0.789 0.668 0.353 2e-51
Q8R180464 ERO1-like protein alpha O no no 0.786 0.668 0.350 3e-51
>sp|Q9C7S7|ERO1_ARATH Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1 Back     alignment and function desciption
 Score =  548 bits (1411), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 249/326 (76%), Positives = 286/326 (87%), Gaps = 1/326 (0%)

Query: 43  NLSHFAPADKSCHCA-QEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYF 101
           N+  F     SC C+ Q+  KY G++EDCCCDYETV+ LN +VL+P LQ+LV TPFFRY+
Sbjct: 41  NVGFFFSDRNSCSCSLQKTGKYKGMIEDCCCDYETVDNLNTEVLNPLLQDLVTTPFFRYY 100

Query: 102 KVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAV 161
           KVKLWCDCPFWPDDGMCRLRDCSVCECPE EFPE FKKPF+ GL SDDL CQEGKP+ AV
Sbjct: 101 KVKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFVPGLPSDDLKCQEGKPQGAV 160

Query: 162 DRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSE 221
           DRT+D++AFRGW ET NPWTHDD+TD+ EM+YVNLQLNPERYTGYTGPSARRIWD+IYSE
Sbjct: 161 DRTIDNRAFRGWVETKNPWTHDDDTDSGEMSYVNLQLNPERYTGYTGPSARRIWDSIYSE 220

Query: 222 NCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYP 281
           NCP Y S + C E+++LYKLISGLHSSIS+HIAADYLLDE+ N WGQN+ LMYDR+LR+P
Sbjct: 221 NCPKYSSGETCPEKKVLYKLISGLHSSISMHIAADYLLDESRNQWGQNIELMYDRILRHP 280

Query: 282 DRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLP 341
           DRVRN+YFT+LFVLRAVTKA  YLEQAEY+TGN  EDLKTQSL+KQLLY+P+LQ ACP+P
Sbjct: 281 DRVRNMYFTYLFVLRAVTKATAYLEQAEYDTGNHAEDLKTQSLIKQLLYSPKLQTACPVP 340

Query: 342 FDEAKLWKGQRGPELKQKIQGQFRNI 367
           FDEAKLW+GQ GPELKQ+IQ QFRNI
Sbjct: 341 FDEAKLWQGQSGPELKQQIQKQFRNI 366




Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. Acts by oxidizing directly PDI isomerase through a direct disulfide exchange. Does not act as a direct oxidant of folding substrate, but relies on PDI to transfer oxidizing equivalent. Does not oxidize all PDI related proteins, suggesting that it can discriminate between PDI and related proteins. Its reoxidation probably involves electron transfer to molecular oxygen via FAD. Acts independently of glutathione. May be responsible for a significant proportion of reactive oxygen species (ROS) in the cell, thereby being a source of oxidative stress.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 8EC: .EC: 4EC: .EC: -
>sp|Q7X9I4|ERO2_ARATH Endoplasmic oxidoreductin-2 OS=Arabidopsis thaliana GN=AERO2 PE=1 SV=1 Back     alignment and function description
>sp|A5PJN2|ERO1A_BOVIN ERO1-like protein alpha OS=Bos taurus GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|B6CVD7|ERO1A_PIG ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|Q96HE7|ERO1A_HUMAN ERO1-like protein alpha OS=Homo sapiens GN=ERO1L PE=1 SV=2 Back     alignment and function description
>sp|Q86YB8|ERO1B_HUMAN ERO1-like protein beta OS=Homo sapiens GN=ERO1LB PE=1 SV=2 Back     alignment and function description
>sp|Q8R4A1|ERO1A_RAT ERO1-like protein alpha OS=Rattus norvegicus GN=Ero1l PE=1 SV=1 Back     alignment and function description
>sp|Q8R2E9|ERO1B_MOUSE ERO1-like protein beta OS=Mus musculus GN=Ero1lb PE=2 SV=1 Back     alignment and function description
>sp|Q6DD71|ERO1A_XENLA ERO1-like protein alpha OS=Xenopus laevis GN=ero1l PE=2 SV=1 Back     alignment and function description
>sp|Q8R180|ERO1A_MOUSE ERO1-like protein alpha OS=Mus musculus GN=Ero1l PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
255587744 513 Endoplasmic oxidoreductin-1 precursor, p 0.918 0.705 0.804 1e-176
356530543465 PREDICTED: endoplasmic oxidoreductin-2-l 0.911 0.772 0.807 1e-173
356556515465 PREDICTED: endoplasmic oxidoreductin-2-l 0.916 0.776 0.795 1e-172
359483898487 PREDICTED: endoplasmic oxidoreductin-1-l 0.883 0.714 0.774 1e-167
297740752 499 unnamed protein product [Vitis vinifera] 0.883 0.697 0.774 1e-167
449433609469 PREDICTED: endoplasmic oxidoreductin-1-l 0.893 0.750 0.782 1e-167
449530012458 PREDICTED: endoplasmic oxidoreductin-1-l 0.893 0.768 0.782 1e-167
357450507464 Endoplasmic oxidoreductin-1 [Medicago tr 0.878 0.745 0.790 1e-164
224056607481 predicted protein [Populus trichocarpa] 0.921 0.754 0.737 1e-163
147841803 589 hypothetical protein VITISV_002206 [Viti 0.827 0.553 0.766 1e-160
>gi|255587744|ref|XP_002534381.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] gi|223525406|gb|EEF28005.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/368 (80%), Positives = 331/368 (89%), Gaps = 6/368 (1%)

Query: 1   MVEPEAEKKKKGTSYKT-RWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQE 59
           MV  E EKKK+ +  K  RW +++GA+IA++ A   A ++ +PN++ F   ++SC C Q 
Sbjct: 1   MVGSEPEKKKRNSEGKQWRW-VVIGAIIALIFAFTTA-SITTPNINLFGQPNESCSCPQ- 57

Query: 60  KDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCR 119
             KYSG+VEDCCCDYETV++LNE+VLHPSLQ+LVKTPFFRYFKVKLWCDCPFWPDDGMCR
Sbjct: 58  --KYSGMVEDCCCDYETVDRLNEEVLHPSLQDLVKTPFFRYFKVKLWCDCPFWPDDGMCR 115

Query: 120 LRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP 179
           LRDCSVCECPE EFPESF+ PF  GL SD+L CQEGKP+AAVDRTLDS+AFRGWTE DNP
Sbjct: 116 LRDCSVCECPEGEFPESFRTPFRGGLPSDNLLCQEGKPQAAVDRTLDSKAFRGWTEIDNP 175

Query: 180 WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILY 239
           WT+DDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDA+YSENCP YPS++LCQEERILY
Sbjct: 176 WTNDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPRYPSEELCQEERILY 235

Query: 240 KLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVT 299
           KLISGLHSSISIHIAADYLLDE+ NLWGQNLTLMYDRVLRYPDRVRNLYF+FLFVLRAVT
Sbjct: 236 KLISGLHSSISIHIAADYLLDESKNLWGQNLTLMYDRVLRYPDRVRNLYFSFLFVLRAVT 295

Query: 300 KAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQK 359
           KAAEYLEQAEY+TGNP EDL+T SLM+QLLYN +LQAACPLPFDEAKLWKGQRGPELKQK
Sbjct: 296 KAAEYLEQAEYDTGNPTEDLRTHSLMRQLLYNSKLQAACPLPFDEAKLWKGQRGPELKQK 355

Query: 360 IQGQFRNI 367
           IQ +FRNI
Sbjct: 356 IQERFRNI 363




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530543|ref|XP_003533840.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|356556515|ref|XP_003546570.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|359483898|ref|XP_002271644.2| PREDICTED: endoplasmic oxidoreductin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740752|emb|CBI30934.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433609|ref|XP_004134590.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449530012|ref|XP_004171991.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357450507|ref|XP_003595530.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] gi|355484578|gb|AES65781.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224056607|ref|XP_002298934.1| predicted protein [Populus trichocarpa] gi|222846192|gb|EEE83739.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147841803|emb|CAN62205.1| hypothetical protein VITISV_002206 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
TAIR|locus:2207031469 ERO1 "endoplasmic reticulum ox 0.908 0.763 0.669 3.5e-139
ZFIN|ZDB-GENE-060929-744488 zgc:153032 "zgc:153032" [Danio 0.451 0.364 0.398 4.7e-50
UNIPROTKB|E1C917467 ERO1LB "Uncharacterized protei 0.403 0.340 0.416 2.9e-48
UNIPROTKB|F8WFP9464 Ero1l "ERO1-like protein alpha 0.428 0.364 0.384 3.7e-48
UNIPROTKB|E1C0W7463 ERO1L "Uncharacterized protein 0.449 0.382 0.373 4.7e-48
UNIPROTKB|E1C542463 ERO1L "Uncharacterized protein 0.449 0.382 0.373 4.7e-48
RGD|621713464 Ero1l "ERO1-like (S. cerevisia 0.428 0.364 0.384 9.8e-48
UNIPROTKB|Q96HE7468 ERO1L "ERO1-like protein alpha 0.428 0.361 0.382 2e-47
MGI|MGI:1354385464 Ero1l "ERO1-like (S. cerevisia 0.428 0.364 0.379 3.3e-47
UNIPROTKB|B6CVD7468 ERO1L "ERO1-like protein alpha 0.428 0.361 0.377 5.3e-47
TAIR|locus:2207031 ERO1 "endoplasmic reticulum oxidoreductins 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
 Identities = 245/366 (66%), Positives = 284/366 (77%)

Query:     3 EPEAEKKKKGTSYKTRWSXXXXXXXXXXXXXXXXXXXKSPNLSHFAPADKSCHCAQEKD- 61
             E E+EKK+K      RW                     + N+  F     SC C+ +K  
Sbjct:     8 EEESEKKRK----TWRWPLATLVVVFLAVAVSSRT---NSNVGFFFSDRNSCSCSLQKTG 60

Query:    62 KYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLR 121
             KY G++EDCCCDYETV+ LN +VL+P LQ+LV TPFFRY+KVKLWCDCPFWPDDGMCRLR
Sbjct:    61 KYKGMIEDCCCDYETVDNLNTEVLNPLLQDLVTTPFFRYYKVKLWCDCPFWPDDGMCRLR 120

Query:   122 DCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWT 181
             DCSVCECPE EFPE FKKPF+ GL SDDL CQEGKP+ AVDRT+D++AFRGW ET NPWT
Sbjct:   121 DCSVCECPENEFPEPFKKPFVPGLPSDDLKCQEGKPQGAVDRTIDNRAFRGWVETKNPWT 180

Query:   182 HDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKX 241
             HDD+TD+ EM+YVNLQLNPERYTGYTGPSARRIWD+IYSENCP Y S + C E+++LYK 
Sbjct:   181 HDDDTDSGEMSYVNLQLNPERYTGYTGPSARRIWDSIYSENCPKYSSGETCPEKKVLYKL 240

Query:   242 XXXXXXXXXXXXAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKA 301
                         AADYLLDE+ N WGQN+ LMYDR+LR+PDRVRN+YFT+LFVLRAVTKA
Sbjct:   241 ISGLHSSISMHIAADYLLDESRNQWGQNIELMYDRILRHPDRVRNMYFTYLFVLRAVTKA 300

Query:   302 AEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQ 361
               YLEQAEY+TGN  EDLKTQSL+KQLLY+P+LQ ACP+PFDEAKLW+GQ GPELKQ+IQ
Sbjct:   301 TAYLEQAEYDTGNHAEDLKTQSLIKQLLYSPKLQTACPVPFDEAKLWQGQSGPELKQQIQ 360

Query:   362 GQFRNI 367
              QFRNI
Sbjct:   361 KQFRNI 366




GO:0003756 "protein disulfide isomerase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0016671 "oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006984 "ER-nucleus signaling pathway" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
ZFIN|ZDB-GENE-060929-744 zgc:153032 "zgc:153032" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C917 ERO1LB "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F8WFP9 Ero1l "ERO1-like protein alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0W7 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C542 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|621713 Ero1l "ERO1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q96HE7 ERO1L "ERO1-like protein alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1354385 Ero1l "ERO1-like (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|B6CVD7 ERO1L "ERO1-like protein alpha" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C7S7ERO1_ARATH1, ., 8, ., 4, ., -0.76380.82480.6929yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.5241.1
hypothetical protein (438 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
pfam04137348 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreduct 1e-121
COG5061425 COG5061, ERO1, Oxidoreductin, endoplasmic reticulu 2e-39
>gnl|CDD|217920 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Back     alignment and domain information
 Score =  354 bits (910), Expect = e-121
 Identities = 135/291 (46%), Positives = 183/291 (62%), Gaps = 14/291 (4%)

Query: 83  QVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDD-GMCRLRDCSVCECPETEFPESFKKPF 141
           + + P L  L  T FFRYFKV L  +CPFWPDD G+C  R C+VC C E+E PE +K   
Sbjct: 1   EKIRPLLNSLTSTDFFRYFKVNLDKECPFWPDDNGLCGSRACAVCTCDESEIPEVWKPSE 60

Query: 142 IRGLSSDDLACQEGKPEAAVDRTL-DSQAFRGWTETDNP--WTHDDETDNAEMTYVNLQL 198
           +     +  AC+EGK    +D +L D +A   W +TD+   +   D+ D+ +  YV+L L
Sbjct: 61  L-----EGSACKEGKDFGELDCSLSDCRASCKWKDTDDLDDYCVVDDEDSDKGVYVDLLL 115

Query: 199 NPERYTGYTGPSARRIWDAIYSENCPTY--PSKQLCQEERILYKLISGLHSSISIHIAAD 256
           NPER+TGY GPSA RIW AIY ENC          C E+R+ Y+LISGLH+SIS H++AD
Sbjct: 116 NPERFTGYKGPSAARIWRAIYEENCFPIGKVDNTCCLEKRVFYRLISGLHASISTHLSAD 175

Query: 257 YLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPM 316
           YL D+    WG NL L ++RV  +PDR+RNLYFT+  VLRA+ K   YLE   + TGN +
Sbjct: 176 YLNDK-TGKWGPNLELFFERVGNHPDRLRNLYFTYALVLRALAKLKPYLENFTFNTGNDL 234

Query: 317 EDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNI 367
           ED +T+ L+K LL   +L ++ P  FDE  L+K     +LK++ + +FRNI
Sbjct: 235 EDTETKLLLKDLLS--ELNSSSPKHFDENLLFKNDEAIKLKEEFRRRFRNI 283


Members of this family are required for the formation of disulphide bonds in the ER. Length = 348

>gnl|CDD|227393 COG5061, ERO1, Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
KOG2608469 consensus Endoplasmic reticulum membrane-associate 100.0
PF04137357 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 100.0
COG5061425 ERO1 Oxidoreductin, endoplasmic reticulum membrane 100.0
>KOG2608 consensus Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=2.1e-115  Score=874.85  Aligned_cols=340  Identities=47%  Similarity=0.851  Sum_probs=309.5

Q ss_pred             CchHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccccCCCccccccccCccccHHhHHHhhhhhhhHhHHHhhcCC
Q 016153           17 TRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTP   96 (394)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~G~v~dc~c~~etId~~N~~~l~p~L~~Lv~td   96 (394)
                      +||.++++++.++.+++.++.        .+..  ..|||+     +.|+|+||+||++||+++|+++|+|+|+.|+++|
T Consensus         2 ~r~~~l~~l~~~~~l~~~v~~--------~~~~--~~~~ck-----~~~~i~dc~c~~~~i~nln~~~i~~~lq~l~ksd   66 (469)
T KOG2608|consen    2 KRAIALLGLIAAVKLISVVNT--------QFAS--SICFCK-----VDGIIEDCTCDYETIDNLNNEVIYPLLQKLLKSD   66 (469)
T ss_pred             chhHHHHHHHHHHHHHHhccc--------cccc--cceeee-----cccccccCCCCHHHHHHhhccccchHHHHHhccc
Confidence            458888888888888887742        1222  689999     7899999999999999999999999999999999


Q ss_pred             CceeEeecCCCCCCCCCCCCCCCCCCCccccCCCCCCCcCCCcccccCCCC-CchhhhcCCC-ccccccccchhhhcCcc
Q 016153           97 FFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSS-DDLACQEGKP-EAAVDRTLDSQAFRGWT  174 (394)
Q Consensus        97 fFRyfKVNL~k~CPFW~dd~~C~~~~C~V~~cde~eiPe~wr~~~~~~~~~-~~~~c~~~~~-~~~vd~tl~~~~~~~w~  174 (394)
                      |||||||||+++||||+|+++|++++|+|++|+|++||++|+++ +++++. .-..|..+.+ .+++|++++.++|..|.
T Consensus        67 ffryYkvnL~~~CpFW~Dd~~C~~r~C~V~~c~e~evPe~~k~~-~~~~~~~~~~e~~~~~~~~~~~d~tl~dr~f~~w~  145 (469)
T KOG2608|consen   67 FFRYYKVNLYRDCPFWPDDGMCLNRACSVEPCPEDEVPEGWKKS-LGKYEPELCSECEDADSELGAKDRTLSDRAFLLWD  145 (469)
T ss_pred             chhheeccccCCCCCCCchhhhhhcCCccccCcccccchhhhhh-hhccChhhhhhhhhccccccchhcccccccccccc
Confidence            99999999999999999999999999999999999999999994 344544 2245555655 78899999999999999


Q ss_pred             ccCCC-CCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCCCC------------CcchhhHHHHHHHH
Q 016153          175 ETDNP-WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYP------------SKQLCQEERILYKL  241 (394)
Q Consensus       175 ~~d~~-~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~~~------------~~~~ClEkrvFYRL  241 (394)
                      .+|+. ||+.|++++++++||||++||||||||+|++|+|||++||+||||++.            .+++|+||||||||
T Consensus       146 ~~d~~~~C~~dd~~s~~~~YVdLl~NPERyTGY~G~sa~rIW~sIYeeNCf~~~~~~~~~~~~~~~l~g~clEkrvfYrL  225 (469)
T KOG2608|consen  146 KHDDLSFCEVDDEESPEMVYVDLLLNPERYTGYKGPSAARIWRSIYEENCFKPDPLFDPNSIPYNWLEGLCLEKRVFYRL  225 (469)
T ss_pred             ccCCccceeecCCCCCCcEEEehhcChhhhcCCCCCCHHHHHHHHHHhhCCCCCcccCCcccccchhccccHHHHHHHHH
Confidence            99998 999998889999999999999999999999999999999999999875            15899999999999


Q ss_pred             hhhhhHHHHHHHHhhhccccccCccCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhhccCCCCccccHHH
Q 016153          242 ISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKT  321 (394)
Q Consensus       242 ISGLHaSIsiHl~~~Yl~d~~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f~tG~~~eD~~t  321 (394)
                      ||||||||+||||++|++-+.+..||||+++|++||++||+||+||||+|++|+|||.||+|||++.+|+||+..||++|
T Consensus       226 ISGlHsSIstHl~~~~y~~~e~~~WgpNl~~f~~Rf~~~P~Rl~NlYF~Yll~lrAl~Ki~pyl~~~~~~tgn~~eD~e~  305 (469)
T KOG2608|consen  226 ISGLHSSISTHLCSFYYLLEETKRWGPNLDLFRARFGNGPDRLRNLYFTYLLVLRALGKIAPYLEELDFYTGNVEEDAET  305 (469)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcccccCcCHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhcchhhhhhhcccccccchHH
Confidence            99999999999999666434343799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCccccccCCCCCCcccCCCCC-CCChhHHHHHhhcccccccccccc
Q 016153          322 QSLMKQLLYNPQLQAACPLPFDEAKLWKGQ-RGPELKQKIQGQFRNIRLCSNPSR  375 (394)
Q Consensus       322 ~~lv~~Ll~~~~~~~~cp~~FDE~~lF~~~-~a~~LKeeFr~~FrNISrIMD~~~  375 (394)
                      +.+|.++++.++   +||.||||+.||+|+ .|++||||||+|||||||||||||
T Consensus       306 k~~i~~il~~i~---~~p~hFdE~~~f~gd~~a~~lKe~fr~hFrnISrIMDCVg  357 (469)
T KOG2608|consen  306 KSLLSDILSQIK---AFPKHFDEAELFAGDSEAPALKEEFRKHFRNISRIMDCVG  357 (469)
T ss_pred             HHHHHHHHHHHh---hCccccchHhhhcccccchhHHHHHHHHHHHHHHHHhhcC
Confidence            999999999865   699999999999999 789999999999999999999997



>PF04137 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1); InterPro: IPR007266 Members of this family are required for the formation of disulphide bonds in the endoplasmic reticulum [, ] Back     alignment and domain information
>COG5061 ERO1 Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3ahq_A465 Hyperactive Human Ero1 Length = 465 4e-43
3ahr_A465 Inactive Human Ero1 Length = 465 5e-43
3nvj_A393 Crystal Structure Of The C143aC166A MUTANT OF ERO1P 5e-23
3m31_A388 Structure Of The C150aC295A MUTANT OF S. CEREVISIAE 2e-22
1rq1_A386 Structure Of Ero1p, Source Of Disulfide Bonds For O 2e-22
1rp4_A389 Structure Of Ero1p, Source Of Disulfide Bonds For O 3e-21
>pdb|3AHQ|A Chain A, Hyperactive Human Ero1 Length = 465 Back     alignment and structure

Iteration: 1

Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 119/363 (32%), Positives = 179/363 (49%), Gaps = 53/363 (14%) Query: 50 ADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDC 109 A + C C + SG ++DC CD ET+++ N L P LQ+L+++ +FRY+KV L C Sbjct: 28 AAQRCFC-----QVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPC 82 Query: 110 PFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPE---AAVDRTLD 166 PFW D C RDC+V E P+ K + + +E + AVD +L Sbjct: 83 PFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLS 142 Query: 167 SQ---AFRGWTETDNP---WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYS 220 + A WT+ D+ + D+ + E YV+L LNPERYTGY GP A +IW+ IY Sbjct: 143 EETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIWNVIYE 202 Query: 221 ENC--------PTYP--SKQ--------------LCQEERILYKXXXXXXXXXXXXXAAD 256 ENC P P S Q LC E+R Y+ +A Sbjct: 203 ENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSAR 262 Query: 257 YLLDEA--NNLWGQNLTLM---YDRVL---RYPDRVRNLYFTFLFVLRAVTKAAEYLEQA 308 YLL E WG N+T +D +L P R++NLYF +L LRA++K + E+ Sbjct: 263 YLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERP 322 Query: 309 EYE--TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQF 364 +++ TGN ++D + + L+ ++L+ + + PL FDE + G + +LK+ + F Sbjct: 323 DFQLFTGNKIQDEENKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKEDFRLHF 379 Query: 365 RNI 367 RNI Sbjct: 380 RNI 382
>pdb|3AHR|A Chain A, Inactive Human Ero1 Length = 465 Back     alignment and structure
>pdb|3NVJ|A Chain A, Crystal Structure Of The C143aC166A MUTANT OF ERO1P Length = 393 Back     alignment and structure
>pdb|3M31|A Chain A, Structure Of The C150aC295A MUTANT OF S. CEREVISIAE ERO1P Length = 388 Back     alignment and structure
>pdb|1RQ1|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 386 Back     alignment and structure
>pdb|1RP4|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 389 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 1e-117
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 1e-107
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Length = 465 Back     alignment and structure
 Score =  349 bits (896), Expect = e-117
 Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 51/372 (13%)

Query: 41  SPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRY 100
             +     P   +  C     + SG ++DC CD ET+++ N   L P LQ+L+++ +FRY
Sbjct: 17  GRHGEEQPPETAAQRCFC---QVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRY 73

Query: 101 FKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLA---CQEGKP 157
           +KV L   CPFW D   C  RDC+V      E P+  K    +     +      ++ + 
Sbjct: 74  YKVNLKRPCPFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAER 133

Query: 158 EAAVDRTLDSQ---AFRGWTETDNPWT---HDDETDNAEMTYVNLQLNPERYTGYTGPSA 211
             AVD +L  +   A   WT+ D+        D+  + E  YV+L LNPERYTGY GP A
Sbjct: 134 LGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDA 193

Query: 212 RRIWDAIYSENCPTYPSKQ------------------------LCQEERILYKLISGLHS 247
            +IW+ IY ENC    + +                        LC E+R  Y+LISGLH+
Sbjct: 194 WKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHA 253

Query: 248 SISIHIAADYLLDEA--NNLWGQNLTLMYDRVLR------YPDRVRNLYFTFLFVLRAVT 299
           SI++H++A YLL E      WG N+T    R          P R++NLYF +L  LRA++
Sbjct: 254 SINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALS 313

Query: 300 KAAEYLEQAEYE--TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPE 355
           K   + E+ +++  TGN ++D + + L+ ++L       + PL FDE   + G +    +
Sbjct: 314 KVLPFFERPDFQLFTGNKIQDEENKMLLLEIL---HEIKSFPLHFDENSFFAGDKKEAHK 370

Query: 356 LKQKIQGQFRNI 367
           LK+  +  FRNI
Sbjct: 371 LKEDFRLHFRNI 382


>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} PDB: 1rp4_A* 1rq1_A* 3nvj_A* Length = 388 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 100.0
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 100.0
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Back     alignment and structure
Probab=100.00  E-value=3e-116  Score=898.52  Aligned_cols=318  Identities=39%  Similarity=0.751  Sum_probs=248.2

Q ss_pred             CCCCcccccCCCccccccccCccccHHhHHHhhhhhhhHhHHHhhcCCCceeEeecCCCCCCCCCCCCCCCCCCCccccC
Q 016153           49 PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCEC  128 (394)
Q Consensus        49 ~~~~~c~c~~~~~~~~G~v~dc~c~~etId~~N~~~l~p~L~~Lv~tdfFRyfKVNL~k~CPFW~dd~~C~~~~C~V~~c  128 (394)
                      ++.+.|||+     ++|+|+||||+|+|||++|+..|+|+|++|+++||||||||||+++||||+++++|++++|+|++|
T Consensus        27 ~~~~~c~c~-----~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V~~c  101 (465)
T 3ahq_A           27 TAAQRCFCQ-----VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPA  101 (465)
T ss_dssp             ----CEEEE-----CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC---------------
T ss_pred             CCCCCcccC-----CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCeeecC
Confidence            567789999     999999999999999999997899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCcccccCCCCC----chhhhcCCCccccccccch---hhhcCccccCCC---CCCCCCCCCCcceEeeCCC
Q 016153          129 PETEFPESFKKPFIRGLSSD----DLACQEGKPEAAVDRTLDS---QAFRGWTETDNP---WTHDDETDNAEMTYVNLQL  198 (394)
Q Consensus       129 de~eiPe~wr~~~~~~~~~~----~~~c~~~~~~~~vd~tl~~---~~~~~w~~~d~~---~~~~De~~~~~~~YVDLl~  198 (394)
                      +|+|||++||++.. +++..    ...|++...++.||++++.   ..+.+|..+|++   +|..||+++++++||||++
T Consensus       102 ~e~eiP~~wr~~~~-~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdLl~  180 (465)
T 3ahq_A          102 QSDEVPDGIKSASY-KYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLL  180 (465)
T ss_dssp             ----------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEGGG
T ss_pred             CcccCChhhccccc-ccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEeccc
Confidence            99999999998653 23221    1357666667889998874   578899887753   5655555678999999999


Q ss_pred             CCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------cchhhHHHHHHHHhhhhhHHHHHHHH
Q 016153          199 NPERYTGYTGPSARRIWDAIYSENCPTYPS------------------------KQLCQEERILYKLISGLHSSISIHIA  254 (394)
Q Consensus       199 NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~ClEkrvFYRLISGLHaSIsiHl~  254 (394)
                      ||||||||+|++|+|||++||+||||++.+                        +++|+|||||||||||||||||||||
T Consensus       181 NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~Hl~  260 (465)
T 3ahq_A          181 NPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLS  260 (465)
T ss_dssp             SCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998542                        68999999999999999999999999


Q ss_pred             hhhcccc--ccCccCCCHHHHHHHh------hccccchhhHHHHHHHHHHHHHHHHHhhhhhcc--CCCCccccHHHHHH
Q 016153          255 ADYLLDE--ANNLWGQNLTLMYDRV------LRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEY--ETGNPMEDLKTQSL  324 (394)
Q Consensus       255 ~~Yl~d~--~~~~W~pNl~~F~~Rv------~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f--~tG~~~eD~~t~~l  324 (394)
                      ++|+++.  .+++|+||+++|++||      |+|||||+||||+|+||||||+||+|||.++.|  +|||..+|++|+++
T Consensus       261 ~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk~~  340 (465)
T 3ahq_A          261 ARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKML  340 (465)
T ss_dssp             HTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHHHH
T ss_pred             HHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHHHH
Confidence            9999754  2789999999999997      578999999999999999999999999997666  99999999999999


Q ss_pred             HHHHhcCccccccCCCCCCcccCCCCC--CCChhHHHHHhhcccccccccccc
Q 016153          325 MKQLLYNPQLQAACPLPFDEAKLWKGQ--RGPELKQKIQGQFRNIRLCSNPSR  375 (394)
Q Consensus       325 v~~Ll~~~~~~~~cp~~FDE~~lF~~~--~a~~LKeeFr~~FrNISrIMD~~~  375 (394)
                      |++||+..   .+||.+|||+.||+|.  .+.+||+|||+|||||||||||||
T Consensus       341 l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVg  390 (465)
T 3ahq_A          341 LLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVG  390 (465)
T ss_dssp             HHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCc
Confidence            99999874   3799999999999984  688999999999999999999997



>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1rp4a_374 a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p 1e-114
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 374 Back     information, alignment and structure

class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 Score =  336 bits (862), Expect = e-114
 Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 16/299 (5%)

Query: 74  YETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFW-PDDGMCRLRDCSVCECPETE 132
           +  +N +NE +    L  L+K+ FF+YF++ L+  C FW  +DG+C  R CSV    + +
Sbjct: 3   FNELNAINENI-RDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 61

Query: 133 -FPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP--WTHDDETDNA 189
             PE ++   +   ++D +   +   +         Q  +   + ++   +   ++ +  
Sbjct: 62  TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGK 121

Query: 190 EMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSI 249
               ++L  NPER+TGY G  A +IW  IY +NC T         +   Y+L+SG H+SI
Sbjct: 122 NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASI 181

Query: 250 SIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAE 309
             H++ +YL  +    W  NL L   R+  +PDRV N+YF +  V +A+ K   YL +  
Sbjct: 182 GTHLSKEYLNTKTGK-WEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240

Query: 310 YETGNPMED-LKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNI 367
           +      E   K  +++ QL             F+E  ++       LK + + +F+N+
Sbjct: 241 FCDLVNKEIKNKMDNVISQL---------DTKIFNEDLVFANDLSLTLKDEFRSRFKNV 290


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d1rp4a_374 Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast 100.0
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00  E-value=1.1e-100  Score=763.90  Aligned_cols=291  Identities=26%  Similarity=0.562  Sum_probs=248.1

Q ss_pred             cHHhHHHhhhhhhhHhHHHhhcCCCceeEeecCCCCCCCCC-CCCCCCCCCCccccCCC-CCCCcCCCcccccCCCCCch
Q 016153           73 DYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWP-DDGMCRLRDCSVCECPE-TEFPESFKKPFIRGLSSDDL  150 (394)
Q Consensus        73 ~~etId~~N~~~l~p~L~~Lv~tdfFRyfKVNL~k~CPFW~-dd~~C~~~~C~V~~cde-~eiPe~wr~~~~~~~~~~~~  150 (394)
                      +|+|||++|++ |+|+|++|+++||||||||||+++||||. ++++|++++|+|++|++ ++||+.||++..+++..+..
T Consensus         2 s~~~vd~~N~~-i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~   80 (374)
T d1rp4a_           2 SFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM   80 (374)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred             CHHHHHHHHHH-HHHHHHHhcCCCceeeeecCCCCCCCCCCccccCcCCCCCCCccCCccccCccccccccccccccchh
Confidence            79999999997 79999999999999999999999999995 67999999999999975 67999999887666654321


Q ss_pred             hhhcCCC--ccccccccchhhhcCccccCC--CCCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCCC
Q 016153          151 ACQEGKP--EAAVDRTLDSQAFRGWTETDN--PWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTY  226 (394)
Q Consensus       151 ~c~~~~~--~~~vd~tl~~~~~~~w~~~d~--~~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~~  226 (394)
                      .......  ....|..  ......|...++  .||..||+++++++||||++||||||||+|++|+|||++||+||||++
T Consensus        81 ~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~  158 (374)
T d1rp4a_          81 KEADDSDDECKFLDQL--CQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTI  158 (374)
T ss_dssp             EECCTTCGGGSBHHHH--SSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCT
T ss_pred             hhccccccchhhcchh--hhhhccccccccccccccccccCCCCceEeehhhCcccccCCCCCcHHHHHHHHHHHhCCCC
Confidence            1111000  0011110  012233433333  366656667889999999999999999999999999999999999999


Q ss_pred             CCcchhhHHHHHHHHhhhhhHHHHHHHHhhhccccccCccCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhh
Q 016153          227 PSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLE  306 (394)
Q Consensus       227 ~~~~~ClEkrvFYRLISGLHaSIsiHl~~~Yl~d~~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~  306 (394)
                      +..++|+|||+|||||||||||||||||++|++ +.++.|+||+++|++|||+||+||+||||+|++|||||+||+|||.
T Consensus       159 ~~~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~-~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~  237 (374)
T d1rp4a_         159 GETGESLAKDAFYRLVSGFHASIGTHLSKEYLN-TKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLP  237 (374)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEEE-TTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCcCccCCCHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999985 5688999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCccccHHHHHHHHHHhcCccccccCCCCCCcccCCCCCCCChhHHHHHhhcccccccccccc
Q 016153          307 QAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIRLCSNPSR  375 (394)
Q Consensus       307 ~~~f~tG~~~eD~~t~~lv~~Ll~~~~~~~~cp~~FDE~~lF~~~~a~~LKeeFr~~FrNISrIMD~~~  375 (394)
                      +++|+++   +|.+++..++.|++.     .||.+|||+.||+++.+.+||+|||.||||||||||||+
T Consensus       238 ~~~~~~~---~~~~~~~~~~~l~~~-----~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~  298 (374)
T d1rp4a_         238 EFSFCDL---VNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQ  298 (374)
T ss_dssp             CCSTTSS---TTTTHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCC
T ss_pred             hcCCCCC---CCHHHHHHHHHHHHH-----hccccCCHHHhcCCcchHHHHHHHHHHHHHHHHHHcccC
Confidence            9999987   456677778888864     367899999999999999999999999999999999997