Citrus Sinensis ID: 016168

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA
ccccccccHHEEEcccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHHHHHccccEEEccccccccccEEccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHcHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
cccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccHHHcccHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHcHHHccHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccEEEcccHHHHHHHHHccccHEEEEcccHHHEEEEccccEEEccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
maeshqqpsvmhkVTGQLYLKSTLSQDIVQNryagfqnpaalpqrhfaygnysnaafqyplaqtcrassdlsliastaspvfvqapsekgfaGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIkagrlsepykgigdcfgrtikdegfaslwrgntanvIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAgnlasggaagasSLFFVYSLDYARTRLANDakaakhggerqfNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYfgmydslkpviltgklqdsFFASFALGWVItngaglasypiDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGkkygsgga
maeshqqpsvmHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMikagrlsepykGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAkaakhggerqfnglIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGkkygsgga
MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLasggaagassLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA
*************VTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKK******
*****QQ**VMHKVTG***********IVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIAS*****************FAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQD***********YKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAA****ERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLG*KYG****
***********HKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA
****HQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKK******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYPLAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
P25083386 ADP,ATP carrier protein, N/A no 0.979 1.0 0.845 0.0
O22342386 ADP,ATP carrier protein 1 N/A no 0.969 0.989 0.848 0.0
P27081386 ADP,ATP carrier protein, N/A no 0.969 0.989 0.838 1e-179
P40941385 ADP,ATP carrier protein 2 yes no 0.974 0.997 0.815 1e-178
P31167381 ADP,ATP carrier protein 1 no no 0.964 0.997 0.817 1e-174
P31691382 ADP,ATP carrier protein, yes no 0.969 1.0 0.776 1e-169
P12857387 ADP,ATP carrier protein 2 N/A no 0.979 0.997 0.764 1e-167
P04709387 ADP,ATP carrier protein 1 N/A no 0.982 1.0 0.763 1e-166
Q41629331 ADP,ATP carrier protein 1 N/A no 0.822 0.978 0.88 1e-160
O49447379 ADP,ATP carrier protein 3 no no 0.956 0.994 0.749 1e-158
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1 Back     alignment and function desciption
 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/394 (84%), Positives = 355/394 (90%), Gaps = 8/394 (2%)

Query: 1   MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYP 60
           MA+ +Q P+V  K   QL L+S+LSQD V  RY G Q   A+ QRHFAYGNYSNA  Q  
Sbjct: 1   MADMNQHPTVFQKAANQLDLRSSLSQD-VHARYGGVQ--PAIYQRHFAYGNYSNAGLQ-- 55

Query: 61  LAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKL 120
                +A+ DLSLI S ASPVFVQAP EKGFA FA DFLMGGVSAAVSKTAAAPIERVKL
Sbjct: 56  ---RGQATQDLSLITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKL 112

Query: 121 LIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKD 180
           LIQNQDEM+KAGRLSEPYKGIG+CFGRTIK+EGF SLWRGNTANVIRYFPTQALNFAFKD
Sbjct: 113 LIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKD 172

Query: 181 YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGER 240
           YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLAND KA+K GGER
Sbjct: 173 YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDRKASKKGGER 232

Query: 241 QFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFF 300
           QFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPV+LTG LQDSFF
Sbjct: 233 QFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFF 292

Query: 301 ASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKGA 360
           ASF LGW+ITNGAGLASYPIDTVRRRMMMTSGEAVKY SSLDAFSQI+KNEG KSLFKGA
Sbjct: 293 ASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGA 352

Query: 361 GANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA 394
           GANILRA+AGAGVLAGYDKLQ++VLGKK+GSGGA
Sbjct: 353 GANILRAVAGAGVLAGYDKLQVLVLGKKFGSGGA 386
Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane.
Solanum tuberosum (taxid: 4113)
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=AAC2 PE=1 SV=2 Back     alignment and function description
>sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=AAC1 PE=1 SV=2 Back     alignment and function description
>sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1 Back     alignment and function description
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2 Back     alignment and function description
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3 Back     alignment and function description
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1 Back     alignment and function description
>sp|O49447|ADT3_ARATH ADP,ATP carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=AAC3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
225435480393 PREDICTED: ADP,ATP carrier protein, mito 0.994 0.997 0.886 0.0
255544830392 ADP,ATP carrier protein, putative [Ricin 0.994 1.0 0.862 0.0
224072811385 predicted protein [Populus trichocarpa] 0.977 1.0 0.852 0.0
224057451385 predicted protein [Populus trichocarpa] 0.977 1.0 0.840 0.0
78191448386 ADP/ATP translocator-like [Solanum tuber 0.979 1.0 0.847 0.0
81076111386 ADP,ATP carrier protein precursor-like [ 0.979 1.0 0.847 0.0
113457386 RecName: Full=ADP,ATP carrier protein, m 0.979 1.0 0.845 0.0
350540644386 ADP/ATP translocator [Solanum lycopersic 0.979 1.0 0.847 0.0
224059642389 predicted protein [Populus trichocarpa] 0.987 1.0 0.842 0.0
255582238385 ADP,ATP carrier protein, putative [Ricin 0.977 1.0 0.852 0.0
>gi|225435480|ref|XP_002285503.1| PREDICTED: ADP,ATP carrier protein, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/395 (88%), Positives = 368/395 (93%), Gaps = 3/395 (0%)

Query: 1   MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYP 60
           MAE HQ P++M KV GQL+L S++SQD V   Y  FQ+PA L QR  A+GNYSN   QYP
Sbjct: 1   MAERHQHPNIMRKVAGQLHLSSSISQD-VHTHYGSFQSPA-LYQRRSAFGNYSNVVLQYP 58

Query: 61  LAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKL 120
           + Q+C+A+ DLSLIASTASPVFVQAP EKGFA FAVDFLMGGVSAAVSKTAAAPIERVKL
Sbjct: 59  MTQSCQATQDLSLIASTASPVFVQAPQEKGFASFAVDFLMGGVSAAVSKTAAAPIERVKL 118

Query: 121 LIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKD 180
           LIQNQDEMIKAGRLSEPYKGIGDCF RTIKDEGFASLWRGNTANVIRYFPTQALNFAFKD
Sbjct: 119 LIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKD 178

Query: 181 YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKH-GGE 239
           YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSL FVYSLDYARTRLANDAKAAK  GG+
Sbjct: 179 YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGD 238

Query: 240 RQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSF 299
           RQFNGL+DVYRKTLK+DGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSF
Sbjct: 239 RQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSF 298

Query: 300 FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKG 359
           FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKY SSLDAF+QILKNEGAKSLFKG
Sbjct: 299 FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQILKNEGAKSLFKG 358

Query: 360 AGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA 394
           AGANILRA+AGAGVLAGYDKLQ++VLGKKYGSGGA
Sbjct: 359 AGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 393

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255544830|ref|XP_002513476.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223547384|gb|EEF48879.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224072811|ref|XP_002303893.1| predicted protein [Populus trichocarpa] gi|222841325|gb|EEE78872.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224057451|ref|XP_002299232.1| predicted protein [Populus trichocarpa] gi|222846490|gb|EEE84037.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|78191448|gb|ABB29945.1| ADP/ATP translocator-like [Solanum tuberosum] gi|82621182|gb|ABB86279.1| ADP,ATP carrier protein precursor-like [Solanum tuberosum] Back     alignment and taxonomy information
>gi|81076111|gb|ABB55387.1| ADP,ATP carrier protein precursor-like [Solanum tuberosum] Back     alignment and taxonomy information
>gi|113457|sp|P25083.1|ADT1_SOLTU RecName: Full=ADP,ATP carrier protein, mitochondrial; AltName: Full=ADP/ATP translocase; AltName: Full=Adenine nucleotide translocator; Short=ANT; Flags: Precursor gi|21407|emb|CAA44054.1| ADP /ATP translocator [Solanum tuberosum] Back     alignment and taxonomy information
>gi|350540644|ref|NP_001234018.1| ADP/ATP translocator [Solanum lycopersicum] gi|1890116|gb|AAB49700.1| ADP/ATP translocator [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|224059642|ref|XP_002299948.1| predicted protein [Populus trichocarpa] gi|222847206|gb|EEE84753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255582238|ref|XP_002531911.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223528451|gb|EEF30484.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
TAIR|locus:2077778381 AAC1 "ADP/ATP carrier 1" [Arab 0.964 0.997 0.8 2.3e-165
TAIR|locus:2185041385 AAC2 "ADP/ATP carrier 2" [Arab 0.974 0.997 0.792 4.3e-164
TAIR|locus:2121363379 AAC3 "ADP/ATP carrier 3" [Arab 0.956 0.994 0.723 4e-145
UNIPROTKB|G4MKR0315 MGG_16149 "ADP,ATP carrier pro 0.769 0.961 0.737 2.9e-119
POMBASE|SPBC530.10c322 anc1 "mitochondrial adenine nu 0.807 0.987 0.691 2e-118
ASPGD|ASPL0000018215311 AN4064 [Emericella nidulans (t 0.761 0.964 0.733 1.4e-117
CGD|CAL0003655301 PET9 [Candida albicans (taxid: 0.753 0.986 0.708 6.6e-113
UNIPROTKB|Q5A516301 PET9 "Potential mitochondrial 0.753 0.986 0.708 6.6e-113
SGD|S000000126318 PET9 "Major ADP/ATP carrier of 0.804 0.996 0.667 1.1e-110
SGD|S000000289307 AAC3 "Mitochondrial inner memb 0.748 0.960 0.699 1.4e-110
TAIR|locus:2077778 AAC1 "ADP/ATP carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
 Identities = 316/395 (80%), Positives = 342/395 (86%)

Query:     1 MAESHQQPSVMHKVTGQLYLKSTLSQDIVQNRYAGFQNPAALPQRHFAYGNYSNAAFQYP 60
             M +  Q P++  K  GQ +++S++S+D+      G+Q P+ + QRH  YGNYSNAAFQ+P
Sbjct:     1 MVDQVQHPTIAQKAAGQ-FMRSSVSKDV----QVGYQRPS-MYQRHATYGNYSNAAFQFP 54

Query:    61 LAQTCRASSDLSLIASTASPVFVQAPSEKGFAGFAVDFLMGGVSAAVSKTAAAPIERVKL 120
                T R      ++A+TASPVFVQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKL
Sbjct:    55 --PTSR------MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKL 106

Query:   121 LIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKD 180
             LIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGF SLWRGNTANVIRYFPTQALNFAFKD
Sbjct:   107 LIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKD 166

Query:   181 YFKRLFNFKKDRDGYWKWFAGNLXXXXXXXXXXLFFVYSLDYARTRLANDAKAAKHGGE- 239
             YFKRLFNFKKDRDGYWKWFAGNL          L FVYSLDYARTRLANDAKAAK GG  
Sbjct:   167 YFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGG 226

Query:   240 RQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSF 299
             RQF+GL+DVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFG+YDS+KPV+LTG LQDSF
Sbjct:   227 RQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSF 286

Query:   300 FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFSQILKNEGAKSLFKG 359
             FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKY SSLDAF QILKNEGAKSLFKG
Sbjct:   287 FASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKG 346

Query:   360 AGANILRAIAGAGVLAGYDKLQMIVLGKKYGSGGA 394
             AGANILRA+AGAGVL+GYDKLQ+IV GKKYGSGGA
Sbjct:   347 AGANILRAVAGAGVLSGYDKLQLIVFGKKYGSGGA 381
GO:0005215 "transporter activity" evidence=IEA
GO:0005471 "ATP:ADP antiporter activity" evidence=ISS;IDA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005740 "mitochondrial envelope" evidence=TAS
GO:0015865 "purine nucleotide transport" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005507 "copper ion binding" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2185041 AAC2 "ADP/ATP carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121363 AAC3 "ADP/ATP carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MKR0 MGG_16149 "ADP,ATP carrier protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC530.10c anc1 "mitochondrial adenine nucleotide carrier Anc1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000018215 AN4064 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003655 PET9 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A516 PET9 "Potential mitochondrial inner membrane ATP/ADP translocator" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000000126 PET9 "Major ADP/ATP carrier of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000000289 AAC3 "Mitochondrial inner membrane ADP/ATP translocator" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49382ADT_KLULANo assigned EC number0.72600.76640.9901yesno
Q41630ADT2_WHEATNo assigned EC number0.86460.82230.9788N/Ano
P02723ADT_NEUCRNo assigned EC number0.74910.76900.9680N/Ano
P51881ADT2_MOUSENo assigned EC number0.55470.72080.9530yesno
P18238ADT3_YEASTNo assigned EC number0.72970.74870.9609yesno
Q27238ADT1_ANOGANo assigned EC number0.55400.73090.9568yesno
P12857ADT2_MAIZENo assigned EC number0.76450.97960.9974N/Ano
O97470ADT_DICDINo assigned EC number0.51190.72840.9288yesno
Q09073ADT2_RATNo assigned EC number0.55470.72080.9530yesno
O22342ADT1_GOSHINo assigned EC number0.84830.96950.9896N/Ano
P12235ADT1_HUMANNo assigned EC number0.55250.72840.9630yesno
P27081ADT2_SOLTUNo assigned EC number0.83840.96950.9896N/Ano
P27080ADT_CHLRENo assigned EC number0.81450.76140.9740N/Ano
P31167ADT1_ARATHNo assigned EC number0.81770.96440.9973nono
O49447ADT3_ARATHNo assigned EC number0.74930.95680.9947nono
Q41629ADT1_WHEATNo assigned EC number0.880.82230.9788N/Ano
P40941ADT2_ARATHNo assigned EC number0.81510.97460.9974yesno
P31691ADT_ORYSJNo assigned EC number0.77660.96951.0yesno
P32007ADT3_BOVINNo assigned EC number0.54840.71820.9496yesno
P04709ADT1_MAIZENo assigned EC number0.76390.98221.0N/Ano
Q09188ADT_SCHPONo assigned EC number0.73220.78680.9627yesno
P25083ADT1_SOLTUNo assigned EC number0.84510.97961.0N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-119
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-18
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information 
 Score =  348 bits (894), Expect = e-119
 Identities = 164/295 (55%), Positives = 200/295 (67%), Gaps = 12/295 (4%)

Query: 94  FAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM--IKAGRLSEPYKGIGDCFGRTIKD 151
           FA DFLMGG+SAA+SKTA APIERVK+LIQ QD +  IK+G++   Y GI +CF R  K+
Sbjct: 7   FATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKV-PRYSGIVNCFRRVSKE 65

Query: 152 EGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLF-NFKKDRDGYWKWFAGNLASGGAAG 210
           +G  SLWRGNTANVIRYFPTQA NFAFKDYFK +F  + +  D +WK+F  N+ SGG AG
Sbjct: 66  QGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTD-FWKFFGVNILSGGLAG 124

Query: 211 ASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCV 270
           ASSL  VY LD+ARTRLA+D      GG+R+F GL D   K  K  G   LY+GF +S  
Sbjct: 125 ASSLLIVYPLDFARTRLASD---IGKGGDREFTGLFDCLMKISKQTGFLSLYQGFGVSVQ 181

Query: 271 GIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMT 330
           GIIVYRG YFG+YDS K ++       +    +A+   +T  AGL SYP DTVRRRMMM 
Sbjct: 182 GIIVYRGAYFGLYDSAKALLFGNDKNTNILYKWAVAQTVTILAGLISYPFDTVRRRMMMM 241

Query: 331 SG----EAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQ 381
           SG      ++Y  +LD + +ILKNEG    FKGA AN+LR   GA VL  YD+LQ
Sbjct: 242 SGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLRGAGGALVLVFYDELQ 296

Length = 300
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG1519297 consensus Predicted mitochondrial carrier protein 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.88
KOG2745321 consensus Mitochondrial carrier protein [General f 99.88
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG2954427 consensus Mitochondrial carrier protein [General f 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.66
KOG2954427 consensus Mitochondrial carrier protein [General f 99.37
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.3e-60  Score=406.77  Aligned_cols=282  Identities=25%  Similarity=0.392  Sum_probs=248.0

Q ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHhcchhhhhhcCCCCCCCChhHHHHHHhhccCcccccccchHhHHhHhhhhhhh
Q 016168           96 VDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALN  175 (394)
Q Consensus        96 ~~~~ag~~ag~~~~~~~~Pld~ik~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~  175 (394)
                      .++++|.+||++++++.||||++|+|+|++...   ....+.|+++.++++.|+|.||++|||||+.|+++...+.+++|
T Consensus         7 ~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~---~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiY   83 (299)
T KOG0764|consen    7 EPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR---TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLY   83 (299)
T ss_pred             hhhhhhhhhhhhhhhhccchhHhhhhhhhccCc---cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHH
Confidence            356999999999999999999999999998432   12335699999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHHhccCCCCCChhhHHHhHhhHhhHHhHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHHHHHHHHh
Q 016168          176 FAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKT  255 (394)
Q Consensus       176 f~~y~~~k~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pldvvktr~q~~~~~~~~~~~~~~~~~~~~~~~i~~~  255 (394)
                      |.+||.+|..+.+..+...  .++..++.+++.||+++.++|+|+.|+|||++.|....   ....|+++++++++|+++
T Consensus        84 F~~Y~~~K~~~~~~~~~~~--l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~---~~~~Y~~~f~a~rki~k~  158 (299)
T KOG0764|consen   84 FFFYDFLKSFITEGFNSGL--LSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV---QSTAYKGMFDALRKIYKE  158 (299)
T ss_pred             HHHHHHHHHHHhcCCCccc--chHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc---cccccccHHHHHHHHHHH
Confidence            9999999999965544332  34578999999999999999999999999999988732   346899999999999999


Q ss_pred             hCcccccccchHHHHhHHHHHhhHHhhHHhhHHHHhcCCC--C---chhHHHHHHHHHHHHhhhhccchHHHHHHHhccc
Q 016168          256 DGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKL--Q---DSFFASFALGWVITNGAGLASYPIDTVRRRMMMT  330 (394)
Q Consensus       256 ~G~~g~y~G~~~~~~r~~~~~~i~~~~ye~~k~~l~~~~~--~---~~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~~  330 (394)
                      ||++|||+|+.|.++... +.+++|..||.+|..+.+..+  .   .+....++.+.++.++|+.+|||++|+|+|||.+
T Consensus       159 EG~rgLY~GlVP~L~Gvs-hgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~  237 (299)
T KOG0764|consen  159 EGFRGLYKGLVPGLLGVS-HGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQ  237 (299)
T ss_pred             HhHHHHHhhhhhHhhhhc-hhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhc
Confidence            999999999999999655 999999999999999854221  1   2335666777799999999999999999999987


Q ss_pred             CCCCCCCCCHHHHHHHHHHhhChhhcccchHHHHHHHhhhhHH-HHHHHHHHHHHcCC
Q 016168          331 SGEAVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGV-LAGYDKLQMIVLGK  387 (394)
Q Consensus       331 ~~~~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i-~~~ye~~~~~~~~~  387 (394)
                      +. .+.|.+++++++++|+.||++|||||+.++++|.+|.+.| |.+||.+++++...
T Consensus       238 ~~-~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~  294 (299)
T KOG0764|consen  238 SD-NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTH  294 (299)
T ss_pred             cc-CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhcc
Confidence            65 5688999999999999999999999999999999999999 99999999987643

>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-73
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-12
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 6e-08
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  271 bits (693), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 152/299 (50%), Positives = 190/299 (63%), Gaps = 16/299 (5%)
Query: 94  FAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEG 153
           F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++G
Sbjct: 7   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 65
Query: 154 FASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNLXXXXXXXXX 212
           F S WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNL         
Sbjct: 66  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 125
Query: 213 XLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGI 272
            L FVY LD+ARTRLA D    K   +R+F GL +   K  K+DG+ GLY+GFN+S  GI
Sbjct: 126 SLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 183
Query: 273 IVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVI----TNGAGLASYPIDTVRRRMM 328
           I+YR  YFG+YD+ K     G L D       + W+I    T  AGL SYP DTVRRRMM
Sbjct: 184 IIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 238
Query: 329 MTSGEA---VKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIV 384
           M SG     + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD+++  V
Sbjct: 239 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-142
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-42
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-31
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-23
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  404 bits (1040), Expect = e-142
 Identities = 158/296 (53%), Positives = 199/296 (67%), Gaps = 8/296 (2%)

Query: 93  GFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDE 152
            F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++
Sbjct: 6   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQH-ASKQISAEKQYKGIIDCVVRIPKEQ 64

Query: 153 GFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLASGGAAGA 211
           GF S WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNLASGGAAGA
Sbjct: 65  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124

Query: 212 SSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVG 271
           +SL FVY LD+ARTRLA D    K   +R+F GL +   K  K+DG+ GLY+GFN+S  G
Sbjct: 125 TSLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 182

Query: 272 IIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTS 331
           II+YR  YFG+YD+ K  +L          S+ +   +T  AGL SYP DTVRRRMMM S
Sbjct: 183 IIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS 241

Query: 332 GEA---VKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIV 384
           G     + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD+++  V
Sbjct: 242 GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-58  Score=425.26  Aligned_cols=288  Identities=52%  Similarity=0.869  Sum_probs=243.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhccHHHHHHHHhcchhhhhhcCCCCCCCChhHHHHHHhhccCcccccccchHhHHhHhhh
Q 016168           92 AGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPT  171 (394)
Q Consensus        92 ~~~~~~~~ag~~ag~~~~~~~~Pld~ik~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  171 (394)
                      .+.+.++++|++||+++.++++|+|+||+|+|++..... ......|+++++++++|+++||++|||||+.+++++++|.
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~-~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccc-cccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            467789999999999999999999999999999864211 1112358999999999999999999999999999999999


Q ss_pred             hhhhHhhHHHHHHHhccC-CCCCChhhHHHhHhhHhhHHhHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHHHH
Q 016168          172 QALNFAFKDYFKRLFNFK-KDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYR  250 (394)
Q Consensus       172 ~~~~f~~y~~~k~~~~~~-~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pldvvktr~q~~~~~~~~~~~~~~~~~~~~~~  250 (394)
                      ++++|.+||.+|+.+... .............+++|++||++++++++|+|+||+|+|++...  .+....|.+++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~~  161 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNCIT  161 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC--CCcCcCCCCHHHHHH
Confidence            999999999999954332 22222223456789999999999999999999999999998531  122457899999999


Q ss_pred             HHHHhhCcccccccchHHHHhHHHHHhhHHhhHHhhHHHHhcCCCCchhHHHHHHHHHHHHhhhhccchHHHHHHHhccc
Q 016168          251 KTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMT  330 (394)
Q Consensus       251 ~i~~~~G~~g~y~G~~~~~~r~~~~~~i~~~~ye~~k~~l~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~~  330 (394)
                      +|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+. .+.+....+++|++||++++++++|+||||+|+|++
T Consensus       162 ~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~  240 (297)
T 1okc_A          162 KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ  240 (297)
T ss_dssp             HHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999987543 234567789999999999999999999999999987


Q ss_pred             CCC---CCCCCCHHHHHHHHHHhhChhhcccchHHHHHHHhhhhHH-HHHHHHHHHHH
Q 016168          331 SGE---AVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGV-LAGYDKLQMIV  384 (394)
Q Consensus       331 ~~~---~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i-~~~ye~~~~~~  384 (394)
                      ...   ...|.++++|+++|+++||++|||||+.|+++|..+ +++ |.+||.+|+++
T Consensus       241 ~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~-~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          241 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEIKKFV  297 (297)
T ss_dssp             TTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC----
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhcc-ceeeehHHHHHHhhC
Confidence            532   346899999999999999999999999999999754 555 99999998753
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-47
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  161 bits (406), Expect = 3e-47
 Identities = 153/291 (52%), Positives = 192/291 (65%), Gaps = 8/291 (2%)

Query: 94  FAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEG 153
           F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++G
Sbjct: 6   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 64

Query: 154 FASLWRGNTANVIRYFPTQALNFAFKD-YFKRLFNFKKDRDGYWKWFAGNLASGGAAGAS 212
           F S WRGN ANVIRYFPTQALNFAFKD Y +           +W++FAGNLASGGAAGA+
Sbjct: 65  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124

Query: 213 SLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVYRKTLKTDGIAGLYRGFNISCVGI 272
           SL FVY LD+ARTRLA D    K   +R+F GL +   K  K+DG+ GLY+GFN+S  GI
Sbjct: 125 SLCFVYPLDFARTRLAADVG--KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 182

Query: 273 IVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSG 332
           I+YR  YFG+YD+ K ++           S+ +   +T  AGL SYP DTVRRRMMM SG
Sbjct: 183 IIYRAAYFGVYDTAKGML-PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 241

Query: 333 EA---VKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKL 380
                + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD++
Sbjct: 242 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI 292

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=7.6e-53  Score=387.72  Aligned_cols=286  Identities=54%  Similarity=0.883  Sum_probs=250.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhccHHHHHHHHhcchhhhhhcCCCCCCCChhHHHHHHhhccCcccccccchHhHHhHhh
Q 016168           91 FAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFP  170 (394)
Q Consensus        91 ~~~~~~~~~ag~~ag~~~~~~~~Pld~ik~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~  170 (394)
                      ..++...++||++||+++.++++|||+||+|+|++.... .......|+++++++++++++||+++||||+.+.+++..+
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~-~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK-QISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS-SCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCC-CCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            467889999999999999999999999999999986532 2223356899999999999999999999999999999999


Q ss_pred             hhhhhHhhHHHHHHHhccCCCCC-ChhhHHHhHhhHhhHHhHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHHH
Q 016168          171 TQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKHGGERQFNGLIDVY  249 (394)
Q Consensus       171 ~~~~~f~~y~~~k~~~~~~~~~~-~~~~~~~~~~~ag~~ag~~~~~~~~Pldvvktr~q~~~~~~~~~~~~~~~~~~~~~  249 (394)
                      ..+++|.+||.+++.+....... +........+++|++||+++.++++|+|++|+|+|.+....  .....+.+..+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~--~~~~~~~~~~~~~  159 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--AAQREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--TTTCSCSSHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc--ccccccccHHHHH
Confidence            99999999999999887664433 33344566789999999999999999999999999986522  2345688999999


Q ss_pred             HHHHHhhCcccccccchHHHHhHHHHHhhHHhhHHhhHHHHhcCCCCchhHHHHHHHHHHHHhhhhccchHHHHHHHhcc
Q 016168          250 RKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMM  329 (394)
Q Consensus       250 ~~i~~~~G~~g~y~G~~~~~~r~~~~~~i~~~~ye~~k~~l~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~  329 (394)
                      ++++++||+++||+|+.++++|.+|.++++|..||.+|+.+.+. ........++++.+++++++++|+|+||||+|||.
T Consensus       160 ~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~  238 (292)
T d1okca_         160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  238 (292)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc-cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999987543 34556778999999999999999999999999999


Q ss_pred             cCCC---CCCCCCHHHHHHHHHHhhChhhcccchHHHHHHHhhhhHHHHHHHHH
Q 016168          330 TSGE---AVKYNSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKL  380 (394)
Q Consensus       330 ~~~~---~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~i~~~ye~~  380 (394)
                      +..+   ...|.++++++++|+++||++|||||+.|+++|.+|++++|.+||.+
T Consensus       239 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~~~ye~l  292 (292)
T d1okca_         239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI  292 (292)
T ss_dssp             TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhhhHhhcC
Confidence            8643   34688999999999999999999999999999988866559999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure