Citrus Sinensis ID: 016202

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
Protein Sequence
MAWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGAGEE
Secondary Structure (PSIPRED)
ccHHHHHHHHccccccccccccccccccccccccccHHHHHcccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHcccccEEcHHHHHHHHHHccccccccHHHHHHHcccccEEEccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccEEEEEccccccccccHHHHHHHHccccccccccccEEccccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccEEEEEccccEEEEEEccccccccccccccHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHHHHccccccccHHHHHHHcccEEEEEcccccccEEcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHccccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHcccEEEEEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MAWRLFLTKiltptlpnpnflktspfstsflvtkipkrlrkkhkkpdsprtrpvqpdsariphfesilnRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYrelgfprgrKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISkekriplskiyhnrllfgipedfrdRVAKFPEYFRIVVENDGKRILElvnwdptlavsELEREFIVNEDKVKKAFKfpvkygkdlgldesdtrklnllntlplvspysdgwkfDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKkqprtfhlagtEMNWAVFLKDaygengiliqkdpqvVFNEKLCKFAQmqegevvsgagee
Flexible Loop (DISEMBL)
MAWRLFLTKiltptlpnpnflktspfstsflvtkipkrlrkkhkkpdsprtrpvqpdsariphfesilnrdSVFRFLTKTkeflskqpervlrlddagklyrelgfprgrkvvksiqrhPLIFDVYRHVDNKMWLGFTDFVERLLEEERSimesmetdrvnkVRKLLMiskekriplskiyhnrlLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELerefivnedkvkkafkfpvkygkdlgldesdtrklnllntlplvspysdGWKFDMWSLEAEKYRVGVVHEFLSLTlekrasihnivefkeefsltrRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQmqegevvsgagee
Low Complexity Region (SEG)
MAWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTkipkrlrkkhkkpDSPRTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGAGEE
Disordered region (IsUnstruct)
**WRLFLTKILTPTLPNPNFLKTSPFSTSFLVTK****************************HFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEE**********RVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQ*************
Disordered Region (DISOPRED)
**WRLF*TKI**************************************************IPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSE***************FKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKF***************
Disordered Region (DISEMBL)
MAWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTKIP*********************SARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQE**********
Disordered Region (DISPRO)
*AWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKK***************SARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQE**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGAGEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	393
297808965	399	hypothetical protein ARALYDRAFT_911057 [	0.982	0.967	0.683	1e-158
42566353	395	ubiquitin thiolesterase [Arabidopsis tha	0.984	0.979	0.694	1e-157
224066965	404	predicted protein [Populus trichocarpa]	0.992	0.965	0.728	1e-157
255545746	399	conserved hypothetical protein [Ricinus	0.994	0.979	0.735	1e-156
147789011	405	hypothetical protein VITISV_009733 [Viti	0.987	0.958	0.706	1e-155
225459282	405	PREDICTED: uncharacterized protein LOC10	0.987	0.958	0.706	1e-155
449437012	389	PREDICTED: uncharacterized protein LOC10	0.979	0.989	0.735	1e-155
449527889	338	PREDICTED: uncharacterized LOC101212691,	0.860	1.0	0.766	1e-145
356518467	397	PREDICTED: uncharacterized protein LOC10	0.974	0.964	0.690	1e-144
302141966	394	unnamed protein product [Vitis vinifera]	0.913	0.911	0.689	1e-143

>gi|297808965|ref|XP_002872366.1| hypothetical protein ARALYDRAFT_911057 [Arabidopsis lyrata subsp. lyrata] gi|297318203|gb|EFH48625.1| hypothetical protein ARALYDRAFT_911057 [Arabidopsis lyrata subsp. lyrata]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 272/398 (68%), Positives = 331/398 (83%), Gaps = 12/398 (3%)

Query: 1   MAWRLFLTKIL----TPTLPN--------PNFLKTSPFSTSFLVTKIPKRLRKKHKKPDS 48
           MAW  F ++ L     P LP            L+T PFSTSFL+TK P +L+K+ KKP+S
Sbjct: 1   MAWLRFFSRTLIKSQNPILPQISSSSPNPNPNLRTFPFSTSFLITKTPNKLKKRRKKPES 60

Query: 49  PRTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPR 108
            RT+ +Q +S +I HFES+++RD+ FRFL ++KEF+SKQPER+LRLDDAGKLYRELGFPR
Sbjct: 61  ARTKSIQHESTKISHFESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPR 120

Query: 109 GRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLM 168
           GRKV + I +HPLIF  YRH D K+WLGF++F++ LL+EE+ +ME ME DRVN+VRKLLM
Sbjct: 121 GRKVTRFIPKHPLIFQTYRHNDGKIWLGFSEFMQDLLDEEKGLMELMELDRVNRVRKLLM 180

Query: 169 ISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVS 228
           ++K+KRI LSKI+H RLLFGIPEDFRD+VAK+P+YFR+V   DG R+LELVNWD  LAVS
Sbjct: 181 MTKDKRILLSKIHHTRLLFGIPEDFRDQVAKYPDYFRVVTGGDGNRVLELVNWDANLAVS 240

Query: 229 ELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSL 288
           ELER+F+V+EDK K+AFKFPVK+GK+L L+E D RKLN LNT PLVSPYSDGWKFD+W+L
Sbjct: 241 ELERQFMVDEDKAKRAFKFPVKHGKELELEEKDKRKLNQLNTFPLVSPYSDGWKFDVWTL 300

Query: 289 EAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNW 348
           EAEKYRVG+VHEFL+LTLEKRASIH+IVEFK+EFSLTR+TY MLKKQP TF+LAGTEMNW
Sbjct: 301 EAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYLMLKKQPTTFYLAGTEMNW 360

Query: 349 AVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEV 386
            VFLKD Y E+G+LI KDPQVVFNEKL K+A MQ+ EV
Sbjct: 361 TVFLKDGYDESGVLISKDPQVVFNEKLYKYADMQQMEV 398

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42566353|ref|NP_192633.2| ubiquitin thiolesterase [Arabidopsis thaliana] gi|34365703|gb|AAQ65163.1| At4g08940 [Arabidopsis thaliana] gi|51968714|dbj|BAD43049.1| hypothetical protein [Arabidopsis thaliana] gi|332657298|gb|AEE82698.1| ubiquitin thiolesterase [Arabidopsis thaliana]

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 275/396 (69%), Positives = 331/396 (83%), Gaps = 9/396 (2%)

Query: 1   MAWRLFLTKILTPTLPN--------PNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTR 52
           MAW  F ++ L  +LP             +TSPFSTSFL+TK P +L+KK KKP+S RT+
Sbjct: 1   MAWLRFFSRTLK-SLPQISSSSPNPNPNFRTSPFSTSFLITKTPDKLKKKRKKPESARTK 59

Query: 53  PVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKV 112
            +Q +S ++PH ES+++RD+ FRFL ++KEF+SKQPER+LRLDDAGKLYRELGFPRGRKV
Sbjct: 60  SIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKV 119

Query: 113 VKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKE 172
            K I +HPLIF  YRH D K+WLGFT+F+E LL+EE+ +MESME DRVN VRKLLM++K+
Sbjct: 120 TKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKD 179

Query: 173 KRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELER 232
           KRI LSKI+H RLLFGIPEDFRDRVAK+P+YFR+V   DG R+LELVNWD  LAVSELER
Sbjct: 180 KRILLSKIHHTRLLFGIPEDFRDRVAKYPDYFRVVTGGDGNRVLELVNWDTNLAVSELER 239

Query: 233 EFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEK 292
            F+++EDK K+ FKFPVK+GK+L L+E DTRKLNLLNT PLVSPYSDGWK D+WSLEAEK
Sbjct: 240 LFMIDEDKAKRVFKFPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEK 299

Query: 293 YRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFL 352
           YRVG+VHEFL+LTLEKRASIH+IVEFK+EFSLTR+TY+MLKKQ  +F+LAGTEMNW VFL
Sbjct: 300 YRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFL 359

Query: 353 KDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVS 388
           KDAY ENG+L+ KDPQVVFNEKL K+A MQ+ E V 
Sbjct: 360 KDAYDENGVLVSKDPQVVFNEKLYKYADMQQMEQVG 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066965|ref|XP_002302302.1| predicted protein [Populus trichocarpa] gi|222844028|gb|EEE81575.1| predicted protein [Populus trichocarpa]

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 292/401 (72%), Positives = 343/401 (85%), Gaps = 11/401 (2%)

Query: 1   MAWRLFLTK------ILTPTLPNPN-----FLKTSPFSTSFLVTKIPKRLRKKHKKPDSP 49
           MAWRL L+K      + +P L NP       L +S FSTSFLVTK PK+ +KK +KP+SP
Sbjct: 1   MAWRLLLSKSTSSKTLTSPPLQNPTPNPLLSLFSSHFSTSFLVTKTPKKHKKKREKPESP 60

Query: 50  RTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRG 109
           RTR VQ  S RIP FES+L RDS FRFLTK+K+FLS+QPER+LRLDDAGKL++ELGFPRG
Sbjct: 61  RTRLVQHPSTRIPQFESLLERDSYFRFLTKSKQFLSQQPERILRLDDAGKLHQELGFPRG 120

Query: 110 RKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMI 169
           RK+ + +QRHPLIF  YRH DNK+W+GFTDF+E LLEEE+ IM+SME+DRVNKVRKLLM+
Sbjct: 121 RKIHRFLQRHPLIFQTYRHTDNKLWVGFTDFMEELLEEEKEIMDSMESDRVNKVRKLLMM 180

Query: 170 SKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSE 229
           SK KRIPLSKI+H RLL GIP+DFRDRVAK+P+YFRIVVE DGKRILELVNWDP+LAVS+
Sbjct: 181 SKNKRIPLSKIHHCRLLLGIPDDFRDRVAKYPDYFRIVVEGDGKRILELVNWDPSLAVSK 240

Query: 230 LEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLE 289
           LE+EF+VNE+K K+AFKFPVK+GKDL L+  DTR+LNLLNTLPLVSPYSDG + ++WSLE
Sbjct: 241 LEKEFMVNEEKAKRAFKFPVKHGKDLDLEVEDTRRLNLLNTLPLVSPYSDGERLELWSLE 300

Query: 290 AEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWA 349
           AEKYRVG++HEFLSLTLEKRASIH+IVEFKEE  LT+ TY+MLKKQPRTF+LAGTEMNW 
Sbjct: 301 AEKYRVGILHEFLSLTLEKRASIHHIVEFKEELCLTKHTYDMLKKQPRTFYLAGTEMNWV 360

Query: 350 VFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGA 390
           VFLKDAY ENG LI KD QV+FNEKL K+AQM+EGE+ S  
Sbjct: 361 VFLKDAYDENGGLIDKDSQVIFNEKLYKYAQMKEGELDSSV 401

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545746|ref|XP_002513933.1| conserved hypothetical protein [Ricinus communis] gi|223547019|gb|EEF48516.1| conserved hypothetical protein [Ricinus communis]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/397 (73%), Positives = 335/397 (84%), Gaps = 6/397 (1%)

Query: 1   MAWRLFLTKIL---TPTLPN---PNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPV 54
           M+WRL  +KI    T TL     PN    SPFSTSFLVTK PK+ +KK KK DSPR +PV
Sbjct: 1   MSWRLLFSKITGAKTLTLFQNRYPNLPFISPFSTSFLVTKTPKKHKKKRKKLDSPRIQPV 60

Query: 55  QPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVK 114
           Q  S R PHFE+++ RDS FRFLTK+K+FLS+Q E VLRLDDAGKLYRELGF RGRKV +
Sbjct: 61  QHPSTRNPHFETLVERDSYFRFLTKSKQFLSQQHEHVLRLDDAGKLYRELGFSRGRKVTR 120

Query: 115 SIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKR 174
            I+RHPL F +YRH DNKMWLGFTDF+E LLEEE+ I +SME DRVNKV KLLM+SK K+
Sbjct: 121 FIERHPLFFQIYRHTDNKMWLGFTDFMEELLEEEKLIFDSMEKDRVNKVLKLLMMSKNKK 180

Query: 175 IPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREF 234
           IPLSKI+H RLLFGIP+DFRDRV K+P++ R VVE+DGKR+LELVNWD  LA+SELEREF
Sbjct: 181 IPLSKIHHCRLLFGIPDDFRDRVVKYPDWIRTVVEDDGKRVLELVNWDSNLAISELEREF 240

Query: 235 IVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYR 294
           +VNEDKVK+AFKFPVK+ KDL LDE D RKLNLLN+LPLVSPYSDG   ++WSLEAEKYR
Sbjct: 241 MVNEDKVKRAFKFPVKHSKDLDLDEEDVRKLNLLNSLPLVSPYSDGETLNLWSLEAEKYR 300

Query: 295 VGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKD 354
           VG++HEFLSLTLEKRASIH+IVEFKEEFSLTR TY+MLKKQPRTF+LAGTEMNW VFLKD
Sbjct: 301 VGIIHEFLSLTLEKRASIHHIVEFKEEFSLTRHTYDMLKKQPRTFYLAGTEMNWVVFLKD 360

Query: 355 AYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGAG 391
           AY E+G LI KDPQVVFNEKL K+AQM+EGE+ S +G
Sbjct: 361 AYDESGNLINKDPQVVFNEKLYKYAQMKEGELDSISG 397

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789011|emb|CAN62585.1| hypothetical protein VITISV_009733 [Vitis vinifera]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/399 (70%), Positives = 333/399 (83%), Gaps = 11/399 (2%)

Query: 1   MAW---RLFLTK-------ILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPR 50
           MAW   RL L+        +L P   NP  L  S FSTSFL TK PK+ +K+ K  +SPR
Sbjct: 1   MAWWWRRLILSSKLSQYKTLLPPISSNPKPL-ISFFSTSFLRTKTPKKHKKRRKPKESPR 59

Query: 51  TRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGR 110
           T+ VQ +  R+ HFE ++ RDS FRF TK+K+FLSKQP+ VLR DDAGKL+RELGFPRGR
Sbjct: 60  TKLVQSEPNRLSHFELLVQRDSFFRFFTKSKDFLSKQPDHVLRFDDAGKLHRELGFPRGR 119

Query: 111 KVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMIS 170
           KV++SIQRHPLIF+ YRH D KMW GFTDF+E LLEEE+SIMESMET+RV  VRKLLM+S
Sbjct: 120 KVIRSIQRHPLIFETYRHTDGKMWFGFTDFMEDLLEEEKSIMESMETERVTTVRKLLMMS 179

Query: 171 KEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSEL 230
            +KRIPLSKIYH R LFGIPEDFRDRV+K+P YF+IVVE+DGKR+LELVNWDP LAVS L
Sbjct: 180 AKKRIPLSKIYHCRALFGIPEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLLAVSAL 239

Query: 231 EREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEA 290
           ER+F+++ED+VKKAFKFPVK+GKDL LDE D RKLNLLNTLPLVSPYSDG   ++W+LEA
Sbjct: 240 ERDFMIDEDRVKKAFKFPVKHGKDLDLDEGDVRKLNLLNTLPLVSPYSDGSGLNIWTLEA 299

Query: 291 EKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAV 350
           EKYRVGV+HE+LS+TLEKRASIH+IVEFKEEFSLT+ TY+ML KQPRTF+LAGTEMNW V
Sbjct: 300 EKYRVGVLHEYLSMTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVV 359

Query: 351 FLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSG 389
           FL+DAY ENG+L+ KDPQVVFNEKL ++A+MQ+ E  SG
Sbjct: 360 FLRDAYDENGVLMNKDPQVVFNEKLFEYAEMQDMESDSG 398

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459282|ref|XP_002285785.1| PREDICTED: uncharacterized protein LOC100257435 isoform 1 [Vitis vinifera] gi|359492865|ref|XP_003634475.1| PREDICTED: uncharacterized protein LOC100257435 isoform 2 [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/399 (70%), Positives = 333/399 (83%), Gaps = 11/399 (2%)

Query: 1   MAW---RLFLTK-------ILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPR 50
           MAW   RL L+        +L P   NP  L  S FSTSFL TK PK+ +K+ K  +SPR
Sbjct: 1   MAWWWRRLILSSKLSQYKTLLPPISSNPKPL-ISFFSTSFLRTKTPKKHKKRRKPKESPR 59

Query: 51  TRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGR 110
           T+ VQ +  R+ HFE ++ RDS FRF TK+K+FLSKQP+ VLR DDAGKL+RELGFPRGR
Sbjct: 60  TKLVQSEPNRLSHFELLVQRDSFFRFFTKSKDFLSKQPDHVLRFDDAGKLHRELGFPRGR 119

Query: 111 KVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMIS 170
           KV++SIQRHPLIF+ YRH D KMW GFTDF+E LLEEE+SIMESMET+RV  VRKLLM+S
Sbjct: 120 KVIRSIQRHPLIFETYRHTDGKMWFGFTDFMEDLLEEEKSIMESMETERVTTVRKLLMMS 179

Query: 171 KEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSEL 230
            +KRIPLSKIYH R LFGIPEDFRDRV+K+P YF+IVVE+DGKR+LELVNWDP LAVS L
Sbjct: 180 AKKRIPLSKIYHCRALFGIPEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLLAVSAL 239

Query: 231 EREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEA 290
           ER+F+++ED+VKKAFKFPVK+GKDL LDE D RKLNLLNTLPLVSPYSDG   ++W+LEA
Sbjct: 240 ERDFMIDEDRVKKAFKFPVKHGKDLDLDEGDVRKLNLLNTLPLVSPYSDGSGLNIWTLEA 299

Query: 291 EKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAV 350
           EKYRVGV+HE+LS+TLEKRASIH+IVEFKEEFSLT+ TY+ML KQPRTF+LAGTEMNW V
Sbjct: 300 EKYRVGVLHEYLSMTLEKRASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVV 359

Query: 351 FLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSG 389
           FL+DAY ENG+L+ KDPQVVFNEKL ++A+MQ+ E  SG
Sbjct: 360 FLRDAYDENGVLMNKDPQVVFNEKLFEYAEMQDMESDSG 398

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437012|ref|XP_004136286.1| PREDICTED: uncharacterized protein LOC101212691 [Cucumis sativus]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 286/389 (73%), Positives = 335/389 (86%), Gaps = 4/389 (1%)

Query: 1   MAWRLFLTKILTP---TLPNPNFLK-TSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPVQP 56
           MAWRL +T + +    TL   N L+ +SP+STSFLVTK+PK+ RKK KK DSPRT+ VQ 
Sbjct: 1   MAWRLLVTNLKSTQRQTLTLTNLLRHSSPYSTSFLVTKLPKKFRKKRKKHDSPRTKLVQS 60

Query: 57  DSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSI 116
           +  RI HFE IL  D+VFRFL K+K+FLSKQPE VLRLDDAGKLYRELGFPRGRKV +SI
Sbjct: 61  EPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFPRGRKVARSI 120

Query: 117 QRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIP 176
           +RHPL+F+ YRH D KMW GFT+F+E L+EEER IM+SME DRV  VRKLLM+S  KRIP
Sbjct: 121 ERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLLMMSANKRIP 180

Query: 177 LSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIV 236
           L+KIY  R +FGIPEDFRDRV+++P+YFR+VVE+DGKR+LELVNWDP+LAVS+LEREF+V
Sbjct: 181 LTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAVSQLEREFVV 240

Query: 237 NEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVG 296
           NEDKVK+ FKFPVK+GKDL L+  DTR+LNLLNTLPLVSPYSDG K ++W+LEAEKYRVG
Sbjct: 241 NEDKVKRLFKFPVKHGKDLDLNMDDTRRLNLLNTLPLVSPYSDGSKLELWTLEAEKYRVG 300

Query: 297 VVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAY 356
           VVHEFLSLTLEK+ASIH+IVEFKEEFSLT+ TY+ML KQPRTF+LAGTEMNW VFLKDAY
Sbjct: 301 VVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLKDAY 360

Query: 357 GENGILIQKDPQVVFNEKLCKFAQMQEGE 385
            ENG LI KDPQVVFNEKL ++AQMQ+ E
Sbjct: 361 DENGDLIHKDPQVVFNEKLRRYAQMQKME 389

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527889|ref|XP_004170941.1| PREDICTED: uncharacterized LOC101212691, partial [Cucumis sativus]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/338 (76%), Positives = 299/338 (88%)

Query: 48  SPRTRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFP 107
           SPRT+ VQ +  RI HFE IL  D+VFRFL K+K+FLSKQPE VLRLDDAGKLYRELGFP
Sbjct: 1   SPRTKLVQSEPDRISHFERILQTDTVFRFLFKSKDFLSKQPEHVLRLDDAGKLYRELGFP 60

Query: 108 RGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLL 167
           RGRKV +SI+RHPL+F+ YRH D KMW GFT+F+E L+EEER IM+SME DRV  VRKLL
Sbjct: 61  RGRKVARSIERHPLLFEPYRHSDGKMWFGFTEFMEELMEEERKIMDSMEMDRVRTVRKLL 120

Query: 168 MISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAV 227
           M+S  KRIPL+KIY  R +FGIPEDFRDRV+++P+YFR+VVE+DGKR+LELVNWDP+LAV
Sbjct: 121 MMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSLAV 180

Query: 228 SELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWS 287
           S+LEREF+VNEDKVK+ FKFPVK+GKDL L+  DTRKLNLLNTLPLVSPYSDG K ++W+
Sbjct: 181 SQLEREFVVNEDKVKRLFKFPVKHGKDLDLNMDDTRKLNLLNTLPLVSPYSDGSKLELWT 240

Query: 288 LEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMN 347
           LEAEKYRVGVVHEFLSLTLEK+ASIH+IVEFKEEFSLT+ TY+ML KQPRTF+LAGTEMN
Sbjct: 241 LEAEKYRVGVVHEFLSLTLEKKASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMN 300

Query: 348 WAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGE 385
           W VFLKDAY ENG LI KDPQVVFNEKL ++AQMQ+ E
Sbjct: 301 WVVFLKDAYDENGDLIHKDPQVVFNEKLRRYAQMQKME 338

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518467|ref|XP_003527900.1| PREDICTED: uncharacterized protein LOC100809565 [Glycine max]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/385 (69%), Positives = 317/385 (82%), Gaps = 2/385 (0%)

Query: 1   MAWRLFLTKILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPVQPDSAR 60
           MAWR F    L+ TL       ++PFSTSFLVTK PK  +KK K   SPRT PV+ +  R
Sbjct: 1   MAWRFF--SFLSKTLNLNPSSSSAPFSTSFLVTKTPKIFKKKLKPKPSPRTTPVRTEPNR 58

Query: 61  IPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHP 120
           IPHFE IL+RD++ RF+T++K+FLS QPE VLRLDDAGKL+RELGFPRGRKV + IQRHP
Sbjct: 59  IPHFERILHRDALLRFVTRSKQFLSAQPEHVLRLDDAGKLHRELGFPRGRKVSRFIQRHP 118

Query: 121 LIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKI 180
           L+F  YRH D K WLGFTD ++ LL EERS+M+++E +RV KVRKLLM+S   RIPLSKI
Sbjct: 119 LLFQTYRHTDAKTWLGFTDLMDDLLAEERSLMDTLELNRVEKVRKLLMMSSRNRIPLSKI 178

Query: 181 YHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDK 240
           +H R LFGIP+DFRDRV+K+P +FRIVVENDG+R+LELVNWDP LAVS LE+EF+V+ED 
Sbjct: 179 HHCRTLFGIPDDFRDRVSKYPNFFRIVVENDGRRVLELVNWDPLLAVSALEKEFVVDEDS 238

Query: 241 VKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHE 300
            K+ F+FPVKYGKDL L+  D+RKLNLLN LPLVSPYSDG K D W+LEAEKYRVGV+HE
Sbjct: 239 AKRKFRFPVKYGKDLDLELDDSRKLNLLNALPLVSPYSDGSKIDGWTLEAEKYRVGVIHE 298

Query: 301 FLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENG 360
           FLSLTLEKRASIH++VEFKEEFSLT+ TY+ML+KQP+ F+LAGTEMNW VFLKDAY  NG
Sbjct: 299 FLSLTLEKRASIHHLVEFKEEFSLTKHTYQMLRKQPQVFYLAGTEMNWGVFLKDAYDGNG 358

Query: 361 ILIQKDPQVVFNEKLCKFAQMQEGE 385
            LI+KDPQ VFNEKL K+AQ+ + E
Sbjct: 359 DLIEKDPQAVFNEKLYKYAQVDQME 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141966|emb|CBI19169.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/380 (68%), Positives = 307/380 (80%), Gaps = 21/380 (5%)

Query: 10  ILTPTLPNPNFLKTSPFSTSFLVTKIPKRLRKKHKKPDSPRTRPVQPDSARIPHFESILN 69
           +L P   NP  L  S FSTSFL TK PK+ +K+ K  +SPRT+ VQ +  R+ HFE ++ 
Sbjct: 29  LLPPISSNPKPL-ISFFSTSFLRTKTPKKHKKRRKPKESPRTKLVQSEPNRLSHFELLVQ 87

Query: 70  RDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHV 129
           RDS FRF TK+K+FLSKQP+ VLR DDAGKL+RELGFPRGRKV++SIQRHPLIF+ YRH 
Sbjct: 88  RDSFFRFFTKSKDFLSKQPDHVLRFDDAGKLHRELGFPRGRKVIRSIQRHPLIFETYRHT 147

Query: 130 DNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGI 189
           D KMW GFTDF+E LLEEE+SIMESMET+RV  VRKLLM+S +KRIPLSKIYH R LFGI
Sbjct: 148 DGKMWFGFTDFMEDLLEEEKSIMESMETERVTTVRKLLMMSAKKRIPLSKIYHCRALFGI 207

Query: 190 PEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPV 249
           PEDFRDRV+K+P YF+IVVE+DGKR+LELVNWDP LA                    FPV
Sbjct: 208 PEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLLA--------------------FPV 247

Query: 250 KYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKR 309
           K+GKDL LDE D RKLNLLNTLPLVSPYSDG   ++W+LEAEKYRVGV+HE+LS+TLEKR
Sbjct: 248 KHGKDLDLDEGDVRKLNLLNTLPLVSPYSDGSGLNIWTLEAEKYRVGVLHEYLSMTLEKR 307

Query: 310 ASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQV 369
           ASIH+IVEFKEEFSLT+ TY+ML KQPRTF+LAGTEMNW VFL+DAY ENG+L+ KDPQV
Sbjct: 308 ASIHHIVEFKEEFSLTKHTYQMLLKQPRTFYLAGTEMNWVVFLRDAYDENGVLMNKDPQV 367

Query: 370 VFNEKLCKFAQMQEGEVVSG 389
           VFNEKL ++A+MQ+ E  SG
Sbjct: 368 VFNEKLFEYAEMQDMESDSG 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	393
TAIR|locus:2138738	395	AT4G08940 [Arabidopsis thalian	0.982	0.977	0.686	2.8e-146
TAIR|locus:4515103321	528	WTF1 "what's this factor?" [Ar	0.788	0.587	0.347	7.1e-45
TAIR|locus:2042561	415	AT2G31290 [Arabidopsis thalian	0.786	0.744	0.305	1e-29
TAIR|locus:2166305	494	emb1692 "embryo defective 1692	0.811	0.645	0.294	1.1e-29
TAIR|locus:2207380	413	AT1G79120 [Arabidopsis thalian	0.832	0.791	0.286	1.2e-28
TAIR|locus:504955534	409	RPD1 "ROOT PRIMORDIUM DEFECTIV	0.834	0.801	0.260	2.5e-26
TAIR|locus:2064940	387	WTF9 "AT2G39120" [Arabidopsis	0.809	0.821	0.244	4.9e-18
TAIR|locus:2009230	390	AT1G06440 [Arabidopsis thalian	0.839	0.846	0.250	1.6e-17
TAIR|locus:2012981	470	AT1G71850 "AT1G71850" [Arabido	0.610	0.510	0.269	4.4e-17

TAIR|locus:2138738 AT4G08940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 271/395 (68%), Positives = 325/395 (82%)

Query:     1 MAWRLFLTKILT--PTL------PNPNFLKTSPFSTSFLVTXXXXXXXXXXXXXDSPRTR 52
             MAW  F ++ L   P +      PNPNF +TSPFSTSFL+T             +S RT+
Sbjct:     1 MAWLRFFSRTLKSLPQISSSSPNPNPNF-RTSPFSTSFLITKTPDKLKKKRKKPESARTK 59

Query:    53 PVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKV 112
              +Q +S ++PH ES+++RD+ FRFL ++KEF+SKQPER+LRLDDAGKLYRELGFPRGRKV
Sbjct:    60 SIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKV 119

Query:   113 VKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKE 172
              K I +HPLIF  YRH D K+WLGFT+F+E LL+EE+ +MESME DRVN VRKLLM++K+
Sbjct:   120 TKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKD 179

Query:   173 KRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVENDGKRILELVNWDPTLAVSELER 232
             KRI LSKI+H RLLFGIPEDFRDRVAK+P+YFR+V   DG R+LELVNWD  LAVSELER
Sbjct:   180 KRILLSKIHHTRLLFGIPEDFRDRVAKYPDYFRVVTGGDGNRVLELVNWDTNLAVSELER 239

Query:   233 EFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEK 292
              F+++EDK K+ FKFPVK+GK+L L+E DTRKLNLLNT PLVSPYSDGWK D+WSLEAEK
Sbjct:   240 LFMIDEDKAKRVFKFPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEK 299

Query:   293 YRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFL 352
             YRVG+VHEFL+LTLEKRASIH+IVEFK+EFSLTR+TY+MLKKQ  +F+LAGTEMNW VFL
Sbjct:   300 YRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFL 359

Query:   353 KDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVV 387
             KDAY ENG+L+ KDPQVVFNEKL K+A MQ+ E V
Sbjct:   360 KDAYDENGVLVSKDPQVVFNEKLYKYADMQQMEQV 394

GO:0009507 "chloroplast" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:4515103321 WTF1 "what's this factor?" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 112/322 (34%), Positives = 179/322 (55%)

Query:    64 FESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIF 123
             F+S++ RD   + +   ++ L  QP+R++ L   GK  R+LG  + R+ +  ++++P +F
Sbjct:    84 FDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVF 143

Query:   124 DVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHN 183
             ++       +    T   ERL  +E  I   +E   V K+RKL+M+S +KRI L KI H 
Sbjct:   144 EIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHL 203

Query:   184 RLLFGIPEDFRDRVA-KFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVN----- 237
             +   G+P +FRD +  ++P+YFR+V    G   LEL +WDP LAVS  E     N     
Sbjct:   204 KTDLGLPLEFRDTICQRYPQYFRVVPTPRGPA-LELTHWDPELAVSAAELSEDDNRTRES 262

Query:   238 EDK---VKKAFKFP-VKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKY 293
             E++   + +  KF  VK  + L L +S+TRK++    +  +SPY D       +LE EK+
Sbjct:   263 EERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKH 322

Query:   294 RVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLK 353
               GV+HE LSLT EKR  + ++  F+EEF  +++   ML + P  F+++      +VFL+
Sbjct:   323 ACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLR 382

Query:   354 DAYGENGILIQKDPQVVFNEKL 375
             +AY  N  LI KDP  +  EK+
Sbjct:   383 EAY-RNSELIDKDPLTLVKEKM 403

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2042561 AT2G31290 [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 100/327 (30%), Positives = 160/327 (48%)

Query:    62 PHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPL 121
             P  ES L+R+  +   ++ K  + + P +V  +    K ++ L   +G K +  ++++P 
Sbjct:    32 PDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDL-QG-KALNWLKKYPC 89

Query:   122 IFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIY 181
              F VY   D + +   T  +  L+EEE  + ++ E    +++ KLLM+S  +R+ + K+ 
Sbjct:    90 CFHVYLEND-EYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLN 148

Query:   182 HNRLLFGIPEDFRDRVA-KFPEYFRIVVENDGKRILE--LVNWDPTLAVSELEREFIVNE 238
               +  FG P+D+  R+  K+ + FR+V  +  K  +E  L+ W P LAVS +E       
Sbjct:   149 EFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKKCG 208

Query:   239 DKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVV 298
              +   +   P  + K          +    N  P +SPY D       S E+EK  VG+V
Sbjct:   209 SEPSFSCSLPSTWTKPW-------ERFMEFNAFPYISPYEDHGDLVEGSKESEKRSVGLV 261

Query:   299 HEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGE 358
             HE LSLTL K+ SI  +  FK EF L  +   ML K P  F++        V L++ Y  
Sbjct:   262 HELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREGY-- 319

Query:   359 NGI-LIQKDPQVVFNEKLCKFAQMQEG 384
             NG  LI KDP VV  +K  +   MQ+G
Sbjct:   320 NGSELIHKDPLVVVKDKFGEL--MQQG 344

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2166305 emb1692 "embryo defective 1692" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 101/343 (29%), Positives = 170/343 (49%)

Query:    60 RIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRH 119
             R P  +  + + +  RF+ K    L  +P+  + ++   K    L       ++  I+R+
Sbjct:    61 RSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRY 120

Query:   120 PLIFDVYR----HVD-------NKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLM 168
             P IF+++     H+        +++ +  T     L  +E ++   +      K++KLLM
Sbjct:   121 PTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLM 180

Query:   169 ISKEKRIPLSKIYHNRLLFGIPEDFRDRVAK-FPEYFRIVVENDGKRILELVNWDPTLAV 227
             +S  +R+ LSK+ H    FG P +FR R+   +P+ F+ V  + G R LELV+ DP LA 
Sbjct:   181 LSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYG-RALELVSSDPELAN 239

Query:   228 S----ELEREFIVNEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKF 283
                  E++R  IV  D+  K  +  ++ G  L L       L      P V PY     +
Sbjct:   240 QMPSPEVDRGLIV--DRPLKFKRLNLRRG--LNLKRRHQGFLIKFRESPDVCPYKMSSDY 295

Query:   284 -DMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLA 342
                 S+EAEK    VV E L LT+EKR  I ++  F++EFSL  +  +++ + P  F+++
Sbjct:   296 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 355

Query:   343 GTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGE 385
                M  +VFL +AY +NG L+ KD ++V  E+L     +QEG+
Sbjct:   356 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDL--IQEGK 396

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

TAIR|locus:2207380 AT1G79120 [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 100/349 (28%), Positives = 163/349 (46%)

Query:    52 RPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRK 111
             RP Q    R+   +  ++ +     + + K  +  Q    L L D   L + +GF     
Sbjct:    56 RPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRD---LEKHVGFVHKWN 112

Query:   112 VVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISK 171
             ++ +I+++P IF V        ++  T+  +++  EE    ESME   VN +RKLLM+S 
Sbjct:   113 LMAAIEKYPTIFYVGGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSV 172

Query:   172 EKRIPLSKIYHNRLLFGIPEDFRDR-VAKFPEYFRIVVENDGKRILELVNWDPTLAVS-- 228
             + R+PL K+   +   G+P+DF+   + K+ E+F + V N GK  L L NWD +LA++  
Sbjct:   173 DCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVIN-GKVNLVLENWDSSLAITAR 231

Query:   229 --ELEREFI---VNEDKVKKAFK---------FPVKYGKDLGLDESDTRKLNLLNTLPLV 274
                L RE     V + K  +  K         F + +      + S   +      +   
Sbjct:   232 EDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFP 291

Query:   275 SPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKK 334
             SPY +  +FD    +A K  V V+HE LSLT+EKR +   +  F  E+ L  R    L K
Sbjct:   292 SPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIK 351

Query:   335 QPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQE 383
                 F++        VFLKDAY  +  LI+K P ++F+++       +E
Sbjct:   352 HQGIFYITNKGARGTVFLKDAYAGSN-LIEKCPLLLFHDRFVALCGRKE 399

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:504955534 RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 91/349 (26%), Positives = 166/349 (47%)

Query:    51 TRPVQPDSARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFP-RG 109
             T P + D  R   +++ +  +   R + K    +  QP   + +     L R LG   + 
Sbjct:    39 TIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQ 98

Query:   110 RKVVKSIQRHPLIFDVYRH-VDNKMWLGFT-DFVERLLEEERSIMESMETDRVNKVRKLL 167
              +    + + P +F++Y H V   ++   T   ++++  E  ++++ +  D V ++RKL+
Sbjct:    99 HEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIP-DAVTRLRKLV 157

Query:   168 MISKEKRIPLSKIYHNRLLFGIPEDFRDRVA-KFPEYFRIVV-ENDGKRILELVNWDPTL 225
             M+S   RI L  +   R  FG+PEDF   V  K P++FR++  E    + +E+V  DP L
Sbjct:   158 MMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNL 217

Query:   226 AVSELER----EFIVNE-DKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDG 280
             ++  +ER    E+     D     F F V +     + +     +     LP  SPY D 
Sbjct:   218 SICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDI 277

Query:   281 WKFDMWSLEA----EKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQP 336
               +D+ S+EA    EK  V  +HE LSLT+EK+ ++  I  F+   +L ++  E L +  
Sbjct:   278 SGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQ 337

Query:   337 RTFHLAGTEMNWA----VFLKDAYGENGILIQKDPQVVFNEKLCKFAQM 381
               F+++ T  N+     VFL++ Y + G L++ +   +   +L +   M
Sbjct:   338 GIFYIS-TRGNYGKLHTVFLREGY-KRGELVEPNDVYLARRRLAELVLM 384

GO:0009507 "chloroplast" evidence=ISM

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0010102 "lateral root morphogenesis" evidence=IMP

TAIR|locus:2064940 WTF9 "AT2G39120" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.9e-18, P = 4.9e-18
 Identities = 83/339 (24%), Positives = 156/339 (46%)

Query:    60 RIPHFESI--LNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQ 117
             R P+F++I  + R S  + +   K  + ++P R + +    K  R+  F    K+   ++
Sbjct:    33 RDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ--FDVSTKIAHFLR 90

Query:   118 RHPLIFDVYRHVD-NKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIP 176
             + P IF+ +   + N  W   T     L  +ER + ++   D  ++++KL+++SK+  +P
Sbjct:    91 KFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLP 150

Query:   177 LSKIYHNRLLFGIPEDFRDRVAKFPEY-----FRIVVENDGKRILEL-VNW-DPTLAVSE 229
             LS +   +   G+P+D+     +FP+      FR V   DG + L +  N  D  L+V +
Sbjct:   151 LSIVQGMKWYLGLPDDY----LQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQ 206

Query:   230 LEREFIVNEDKVK-KAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSL 288
              +        +V  +  +FP+   K   L       L     LP VSPY D    D  S 
Sbjct:   207 -KNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSD 265

Query:   289 EAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNW 348
              AEK  VG +HE L L +E  A    ++  K+ F L ++ ++  ++ P+ F+L+      
Sbjct:   266 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 325

Query:   349 AVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVV 387
                L++ Y +    ++  P +   +K  +   M+  E++
Sbjct:   326 TAILREPYRDKAS-VETHPVLGVRKKYIQL--MKNSELI 361

GO:0005739 "mitochondrion" evidence=IDA

GO:0000373 "Group II intron splicing" evidence=IMP

GO:0003723 "RNA binding" evidence=IDA

GO:0017004 "cytochrome complex assembly" evidence=IMP

TAIR|locus:2009230 AT1G06440 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 88/351 (25%), Positives = 156/351 (44%)

Query:    59 ARIPHFESILNRDSVFRFLTKTKEFLSKQPER---VLRLDDAGKLYRELGFPRGRKVVKS 115
             +R P FE ++++      +   ++     P      L ++   +L ++L   RG      
Sbjct:    35 SRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRG--AASF 92

Query:   116 IQRHPLIFDV-YRHVDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKR 174
             ++++P IF V Y  V  + +   TD    +  +E   + +  +  V+++ +LL +S  K 
Sbjct:    93 LRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKS 152

Query:   175 IPLSKIYHNRLLFGIPEDFRDRV-AKFPEYFRIVVENDGK-RILELVNWDPTLAVSE--L 230
             IPL  ++      G+P+DF D V +K P  F++   ++    ILELV  +      E  +
Sbjct:   153 IPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAV 212

Query:   231 EREFIV-------NEDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSD--GW 281
             E+  +V       + D+ +  F F   Y   + L ++   K+     LP V PY D  G 
Sbjct:   213 EKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVGK 272

Query:   282 KFDMWSLEA-EKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFH 340
             K     +   EK  V + HEFL+LT+EK   +  I  F++ F +     ++    P  F+
Sbjct:   273 KKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFY 332

Query:   341 LAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQMQEGEVVSGAG 391
             ++       VFL++AY E G LI  +P      KL     +     +S +G
Sbjct:   333 VSTKGKRHTVFLREAY-ERGRLIDPNPVYDARRKLLDLVLLGRHAALSESG 382

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2012981 AT1G71850 "AT1G71850" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
 Identities = 67/249 (26%), Positives = 123/249 (49%)

Query:   153 ESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDR-VAKFPEYFRIVVEN- 210
             E+ +    +++ KLLMI++  +IPL  +   +   G+P+D+ +  V +FP+YFR++    
Sbjct:   128 ETYKQGLADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKL 187

Query:   211 DG-KRILELVNWDPTLAVSELEREF-IVNEDKVKK--AFKFPVKYGKDLGLDESDTRKLN 266
              G    LELV W    AVS LE++   + + +  K  A  FP+K+     +D+   + ++
Sbjct:   188 RGCSGELELVCWSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWID 247

Query:   267 LLNTLPLVSPYSDGWKFDMWSLEAEKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTR 326
                 LP +SPY +       S E++K+   V+HE ++L + K+     I+   E   L  
Sbjct:   248 DWQKLPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRS 307

Query:   327 RTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVVFNEKLCKFAQM--QEG 384
             R   +L   P  F+L+       V L+D Y + G+LI+ +  V    +  K      ++ 
Sbjct:   308 RFKRVLHNHPGIFYLSSKLRTHTVVLRDGY-KRGMLIESNELVTSRNRYMKLMNTVKKDN 366

Query:   385 EVVSGAGEE 393
             + VS + ++
Sbjct:   367 KAVSSSSKK 375


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      393       380   0.00090  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  245 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.90u 0.10s 33.00t   Elapsed:  00:00:01
  Total cpu time:  32.90u 0.10s 33.00t   Elapsed:  00:00:01
  Start:  Fri May 10 16:43:50 2013   End:  Fri May 10 16:43:51 2013

GO:0005739 "mitochondrion" evidence=IDA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.19	LOW CONFIDENCE prediction!
3rd Layer	3.4.19.12	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	393
pfam11955	332	pfam11955, PORR, Plant organelle RNA recognition d	1e-122

>gnl|CDD|221338 pfam11955, PORR, Plant organelle RNA recognition domain

 Score =  356 bits (915), Expect = e-122
 Identities = 133/329 (40%), Positives = 197/329 (59%), Gaps = 9/329 (2%)

Query: 60  RIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRH 119
           R P  +  + R+   R + + K+ L  QP+  L L D  KL R+LG PRG   +  ++++
Sbjct: 3   RDPALDKAVEREKRLRLVLRLKDLLLSQPDHSLPLRDLSKLRRQLGLPRG--ALAFLRKY 60

Query: 120 PLIFDVYRH-VDNKMWLGFTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLS 178
           P IF+++RH  D+ + +  T   E LL EE  ++ES E D V+++RKLLM+SK++R+PL 
Sbjct: 61  PSIFELFRHPSDSVLCVRLTPKAEDLLAEEARLLESSEPDLVDRLRKLLMMSKDRRLPLE 120

Query: 179 KIYHNRLLFGIPEDFRDR-VAKFPEYFRIVVENDGKRILELVNWDPTLAVSELEREFIVN 237
           K+ H R   G+P+DFRD  V K+P+YFR+V E DG   LELV+WDP LAVS LE+   + 
Sbjct: 121 KLAHLRRDLGLPDDFRDSLVPKYPDYFRLVDE-DGGDGLELVSWDPELAVSALEKRREIE 179

Query: 238 ---EDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEAEKYR 294
               D+V + F FPVK+     L +    KL     LP +SPY D    D  S EAEK  
Sbjct: 180 DRGGDRVDRRFAFPVKFPPGFKLRKKFREKLEEWQKLPYISPYEDASHLDPGSDEAEKRA 239

Query: 295 VGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKD 354
           V V+HE LSLT+EKR  + ++  F++EF L ++  ++L + P  F+L+       VFL++
Sbjct: 240 VAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKLRKVLLRHPGIFYLSTKGKRHTVFLRE 299

Query: 355 AYGENGILIQKDPQVVFNEKLCKFAQMQE 383
           AY + G L++KDP V+  EKL +     +
Sbjct: 300 AY-DRGELVEKDPLVLAREKLLELMLEGK 327

This family, which was previously known as DUF860, has been shown to be a component of group II intron ribonucleoprotein particles in maize chloroplasts. The domain is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. All of the members are predicted to localise to mitochondria or chloroplasts. It seems likely that most PORR proteins function in organellar RNA metabolism. Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	393
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	100.0
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	99.09

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=100.00  E-value=1.4e-113  Score=853.44  Aligned_cols=326  Identities=41%  Similarity=0.682  Sum_probs=312.6

Q ss_pred             CCCCchhHHHHhhccchhhHHHHHHHHhcCCCCeeehhhhhhhccccCCCCccchhHHhhhCCCceEEEc-cCCCcccee
Q 016202           58 SARIPHFESILNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYR-HVDNKMWLG  136 (393)
Q Consensus        58 ~~Rd~~LD~~i~r~k~lr~v~~lk~li~s~P~~~lpl~~l~k~~~~Lgl~~~~~v~~FlrkyP~iF~~~~-~~~~~~~~r  136 (393)
                      |+||++||++|+++|+++++++|+++|+++|+++||+++|++++++||+ .++++++||+|||+||++|. +..+.+||+
T Consensus         1 w~rd~~lD~~i~~~k~l~~v~~l~~~i~~~p~~~~pl~~l~k~~~~L~l-~~~~~~~flrkyP~iF~~~~~~~~~~~~~~   79 (335)
T PF11955_consen    1 WVRDPYLDKVIEREKRLRFVLRLKDLILSQPSHSLPLRDLSKLRRQLGL-KPRKVSRFLRKYPSIFEVFQHPSRSVPWFR   79 (335)
T ss_pred             CCCchhHHHHHHhhhhHHHHHHHHHHHHcCCCCcccHHHHHHHHHhcCC-CcccHHHHHHhCCceEEEeccCCCCCceEE
Confidence            7999999999999999999999999999999999999999999999999 45799999999999999999 567889999


Q ss_pred             ccHHHHHHHHHHHHHHHhchHHHHHHHHHHhccCCCCccchhhHHhhhhhcCCChhhhhh-hhcCCCCeEEEeccCCcee
Q 016202          137 FTDFVERLLEEERSIMESMETDRVNKVRKLLMISKEKRIPLSKIYHNRLLFGIPEDFRDR-VAKFPEYFRIVVENDGKRI  215 (393)
Q Consensus       137 LT~~a~~L~~eE~~v~~~~e~~~V~rLrKLLMMS~~rrLpL~kl~~lr~dLGLP~DF~~~-v~kyP~~Frvv~~~dg~~~  215 (393)
                      ||++|++|++||+++++++++++|++|+||||||.+++|||++|+|++||||||+||+++ +++|||+|+||+..+|..+
T Consensus        80 LT~~a~~L~~eE~~~~~~~e~~~v~rL~KLLMMS~~~rlpL~ki~~l~~dLGLP~Df~~~lv~~yP~~Frvv~~~~~~~~  159 (335)
T PF11955_consen   80 LTPEAEDLLREERRVREEMEPDLVERLRKLLMMSKDRRLPLSKIAHLRRDLGLPDDFRDSLVPKYPDYFRVVDLEDGGRY  159 (335)
T ss_pred             eCHHHHHHHHHHHHHHHhChHHHHHHHHHHhccCCCCcccHHHHHHHHHHcCCChhhccchhhhCCCCcEEeecCCCCCE
Confidence            999999999999999999999999999999999999999999999999999999999998 7999999999997888899


Q ss_pred             EEEeecCCCCcccHHHHHhhhc-----ccccccceecccCCCCCCccChhHHHHHHhhccCCCCCCCCCCCCCCCCChhh
Q 016202          216 LELVNWDPTLAVSELEREFIVN-----EDKVKKAFKFPVKYGKDLGLDESDTRKLNLLNTLPLVSPYSDGWKFDMWSLEA  290 (393)
Q Consensus       216 LELv~Wdp~LAVS~~Ek~~~~~-----~~~~~~~~~Fp~~~~~g~~l~~~~~~~l~~fQ~LPyiSPYed~~~l~~~S~e~  290 (393)
                      ||||+|||+||||++|++++.+     +.....+++||++||+||++++++++|+++||+|||+|||+|+++++++|+++
T Consensus       160 LeLv~Wd~~LAvs~~E~~~~~~~~~~~~~~~~~~~~Fp~~fp~G~~l~k~~~~~l~~fQ~lPy~SPYed~~~l~~~s~~~  239 (335)
T PF11955_consen  160 LELVSWDPELAVSALEKRAEKEYREKREDGFDRPLAFPVSFPKGFRLKKKFREWLEEFQKLPYISPYEDASHLDPGSDEA  239 (335)
T ss_pred             EEEeecCCccCcCccchhhhhccccccccccCCceeeeecCCCCccccHHHHHHHHHHhcCCCCCCCCCccCCCCCChHH
Confidence            9999999999999999998743     34556789999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhhcccchhhhhhhHHhhHHhhCCcHHHHHHHhhCCCeEEEeeeCCceEEEEecccCCCCcccccCchhh
Q 016202          291 EKYRVGVVHEFLSLTLEKRASIHNIVEFKEEFSLTRRTYEMLKKQPRTFHLAGTEMNWAVFLKDAYGENGILIQKDPQVV  370 (393)
Q Consensus       291 EKRaVaVlHELLSLTveKr~~v~~L~~fr~efgLp~k~~~~l~rHPgIFYvS~k~~~~TVfLREAY~~~g~LIek~PL~~  370 (393)
                      |||||||+||||||||||||++++|+|||+|||||++++++|+|||||||||+||+||||||||||++ |+|||||||+.
T Consensus       240 EKRaVaVlHElLSLTveKr~~~~~L~~fr~ef~lp~k~~~~l~rHPgIFYvS~kg~~~TVfLrEAY~~-~~Liek~Pl~~  318 (335)
T PF11955_consen  240 EKRAVAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKFRRLLLRHPGIFYVSLKGKRHTVFLREAYDG-GELIEKHPLVV  318 (335)
T ss_pred             HhHHHHHHHHHHHhhhhhhccHHHHHHHHHHhCCcHHHHHHHHhCCCeEEEeccCCceEEEEeeccCC-CCCCCCCchHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999985 79999999999


Q ss_pred             HHHHHHHHHHhhccc
Q 016202          371 FNEKLCKFAQMQEGE  385 (393)
Q Consensus       371 ~reK~~~l~~~~~~~  385 (393)
                      +|+||++|+.++..+
T Consensus       319 ~r~k~~~Lm~~~~~~  333 (335)
T PF11955_consen  319 IREKFLELMQEGRRK  333 (335)
T ss_pred             HHHHHHHHHhhcccc
Confidence            999999998877654

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=99.09  E-value=1.2e-10  Score=117.05  Aligned_cols=141  Identities=23%  Similarity=0.372  Sum_probs=108.8

Q ss_pred             HhhccchhhHHHHHHHHhcCCCCeeehhhhhhhccccCCCCccchhHHhhhCCCceEEEccCCCccceeccH--------
Q 016202           68 LNRDSVFRFLTKTKEFLSKQPERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTD--------  139 (393)
Q Consensus        68 i~r~k~lr~v~~lk~li~s~P~~~lpl~~l~k~~~~Lgl~~~~~v~~FlrkyP~iF~~~~~~~~~~~~rLT~--------  139 (393)
                      +-.+...-.|.+|+.+|+-+.+++||++.+..++..||||.+ -..+++.+||+.|.+.....+..++.|..        
T Consensus        94 ~~~~~e~~~v~rL~KLLMMS~~~rlpL~ki~~l~~dLGLP~D-f~~~lv~~yP~~Frvv~~~~~~~~LeLv~Wd~~LAvs  172 (335)
T PF11955_consen   94 VREEMEPDLVERLRKLLMMSKDRRLPLSKIAHLRRDLGLPDD-FRDSLVPKYPDYFRVVDLEDGGRYLELVSWDPELAVS  172 (335)
T ss_pred             HHHhChHHHHHHHHHHhccCCCCcccHHHHHHHHHHcCCChh-hccchhhhCCCCcEEeecCCCCCEEEEeecCCccCcC
Confidence            444445678999999999999999999999999999999986 56789999999999876322222221111        


Q ss_pred             -----------------------------HHH-------HHHHHHHHH---------------HHhchHHHHHHHHHHhc
Q 016202          140 -----------------------------FVE-------RLLEEERSI---------------MESMETDRVNKVRKLLM  168 (393)
Q Consensus       140 -----------------------------~a~-------~L~~eE~~v---------------~~~~e~~~V~rLrKLLM  168 (393)
                                                   .+-       +-+.+=+++               -.++|..+|..++.||.
T Consensus       173 ~~E~~~~~~~~~~~~~~~~~~~~Fp~~fp~G~~l~k~~~~~l~~fQ~lPy~SPYed~~~l~~~s~~~EKRaVaVlHElLS  252 (335)
T PF11955_consen  173 ALEKRAEKEYREKREDGFDRPLAFPVSFPKGFRLKKKFREWLEEFQKLPYISPYEDASHLDPGSDEAEKRAVAVLHELLS  252 (335)
T ss_pred             ccchhhhhccccccccccCCceeeeecCCCCccccHHHHHHHHHHhcCCCCCCCCCccCCCCCChHHHhHHHHHHHHHHH
Confidence                                         111       111110110               12467889999999999


Q ss_pred             cCCCCccchhhHHhhhhhcCCChhhhhhhhcCCCCeEEEec
Q 016202          169 ISKEKRIPLSKIYHNRLLFGIPEDFRDRVAKFPEYFRIVVE  209 (393)
Q Consensus       169 MS~~rrLpL~kl~~lr~dLGLP~DF~~~v~kyP~~Frvv~~  209 (393)
                      |+.++++.+.+|.|++.+||||.+|...+.+||+.|.|...
T Consensus       253 LTveKr~~~~~L~~fr~ef~lp~k~~~~l~rHPgIFYvS~k  293 (335)
T PF11955_consen  253 LTVEKRTEVDHLTHFRKEFGLPQKFRRLLLRHPGIFYVSLK  293 (335)
T ss_pred             hhhhhhccHHHHHHHHHHhCCcHHHHHHHHhCCCeEEEecc
Confidence            99999999999999999999999999999999999999853

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	393
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 84/302 (27%)

Query: 5   LFLTKILTPT--LPNPNFLKTSPFSTSFLVTKIPKRLR--------------KKHKK--- 45
           L L  +      LP    L T+P      ++ I + +R               K      
Sbjct: 306 LLLKYLDCRPQDLP-REVLTTNPR----RLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 46  -------PDSPRTR----PVQPDSARIPHFESILNR-------DSVFRFLTK--TKEFLS 85
                  P   R       V P SA IP    +L+          V   + K      + 
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 86  KQP-ERVLRLDDAGKLYRELGFPRGRKVVKSIQRHPLIFDVYRHVDNKMWLGFTDFVERL 144
           KQP E  + +     +Y EL      K+      H  I D Y                  
Sbjct: 419 KQPKESTISIPS---IYLELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIP----- 466

Query: 145 LEEERSI-------MESME-TDRVNKVRKLLM----ISKEKRIPLSKIYHNRLLFGIPED 192
              ++         ++++E  +R+   R + +    + +       KI H+   +     
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ-------KIRHDSTAWNASGS 519

Query: 193 FRDRVAKFPEYFRIVVENDGK---RILELVNWDPTLAVSELEREFIVNEDKVKKAFKFPV 249
             + + +   Y   + +ND K    +  ++++ P +  + +  ++    D ++ A     
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT---DLLRIALMAED 576

Query: 250 KY 251
           + 
Sbjct: 577 EA 578

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 39/253 (15%), Positives = 71/253 (28%), Gaps = 78/253 (30%)

Query: 126 YRHVD---NKMWLGFTD--------FVERL-----LEEERSIMESMETD-------RVNK 162
           + H+D    +    + D        FV+        +  +SI+   E D        V+ 
Sbjct: 4   HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 163 VRKLLMI--SKEKRI-------PLSKIYHNRLLFGIPEDFRDRVAKFPEY--FRIVVEND 211
             +L     SK++ +        L   Y   L+  I  + R        Y   R  + ND
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 212 G-----------KRILELVNWDPTLAVSELERE-FIV-----------------NEDKVK 242
                       +  L+L       A+ EL     ++                    KV+
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQ-----ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177

Query: 243 KAFKFPVKYGKDLGLDESDTRKLNLLNTL-----PLVSPYSDGWKFDMWSLEAEKYRVGV 297
               F + +  +L    S    L +L  L     P  +  SD        + + +     
Sbjct: 178 CKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE--- 233

Query: 298 VHEFLSLTLEKRA 310
           +   L     +  
Sbjct: 234 LRRLLKSKPYENC 246

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00