Citrus Sinensis ID: 016209

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
MMRRVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKGA
cccHHHHHHHHHHHHHHccccccccccccEEEEcccccccccEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHccccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHccHHHHccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccc
cccHHHHHHHHHHHHEEcccccccccccEEEEEEccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccHHHcccccc
MMRRVSFLVFLLCIVISFknqnadtkkglnitttsttsrsfsyeyaasdpsaFQVVAGAlflsddgkleeggepyrsmeydfyrdscpqaEGTIRAMVRYLHKSRSDVAPALLRLVFHDcfiegcdasillddaegvdsekksppneslkgydVINIIKEELEeicpgvvsCADILALAAREGvvlaggpfyplytgrkdsrlafadiatlelpspnadlSETLASFASRGFDLRETVTLLGAHSIGVIHCKffnnrlhnfgrsnepdpsldpdFLNLLRSkcrnisstsptpsppyallastfdepginvtydghqggfGTVYYRSLLqnrgvlyadqqlmageETGIWVRAYASDVSLFRRDFALAMMKLSNlrvltgpmgqirlncskga
MMRRVSFLVFLLCIVISfknqnadtkkglnitttsttsrSFSYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEgvdsekksppneslkgyDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLelpspnadlSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNisstsptpsppYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSnlrvltgpmgqirlncskga
MMRRVSFLVFLLCIVISFKNQNADTKKGLNItttsttsrsfsYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNIsstsptpsppYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKGA
***************************************************AFQVVAGALFLSDD*********YRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDD****************KGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPS**ADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNF***********************************YALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRL******
**RRVSFLVFLLCIVISFKNQNA**********************AASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSK***********SPPYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSK**
MMRRVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAE***********ESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRN********SPPYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKGA
***RVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISS*SPTPSPPYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQ***N*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMRRVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEYAASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query393 2.2.26 [Sep-21-2011]
O81755404 Putative Peroxidase 48 OS yes no 0.801 0.779 0.534 1e-100
Q9FX85350 Peroxidase 10 OS=Arabidop no no 0.755 0.848 0.411 6e-62
Q9FLV5340 Probable peroxidase 61 OS no no 0.765 0.885 0.394 3e-61
Q67Z07325 Peroxidase 2 OS=Arabidops no no 0.745 0.901 0.375 2e-60
P0DI10325 Peroxidase 1 OS=Arabidops no no 0.745 0.901 0.375 2e-60
O22862335 Probable peroxidase 26 OS no no 0.806 0.946 0.366 3e-60
P22195316 Cationic peroxidase 1 OS= N/A no 0.737 0.917 0.4 3e-60
Q43729313 Peroxidase 57 OS=Arabidop no no 0.740 0.929 0.378 4e-60
P80679305 Peroxidase A2 OS=Armoraci N/A no 0.755 0.973 0.394 7e-59
Q43872317 Peroxidase 64 OS=Arabidop no no 0.750 0.930 0.379 2e-58
>sp|O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3 Back     alignment and function desciption
 Score =  366 bits (940), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/333 (53%), Positives = 232/333 (69%), Gaps = 18/333 (5%)

Query: 78  MEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGV 137
           + YD+YR+SCP AE  I   +R ++     VAP ++RL+FHDCFIEGCDAS+LLD  E  
Sbjct: 68  LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAH 127

Query: 138 DSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTG 197
            SEK + PN SLKG+DVI+ +K ELE +CPGVVSCAD+L LAARE V++AGGPFYPL TG
Sbjct: 128 TSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETG 187

Query: 198 RKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNR 257
           RKDS  A+ D A  ELP+P+A LS  L  F+ RGF+ RETV+L GAHSIG+ HC FF NR
Sbjct: 188 RKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNR 247

Query: 258 LHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPP----------------YALLA 301
           L+NF  + +PDP L+P FL  L++KC    STS   +PP                Y + +
Sbjct: 248 LYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSS 307

Query: 302 STFDEPGINVTYDGHQG--GFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVS 359
              ++  I+++Y+   G   FGT Y+R L+QN+G++ +DQQLM  E T +WVRAYASD  
Sbjct: 308 GNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPL 367

Query: 360 LFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKG 392
           LFRR+FA++MMKLS+  VLTGP+GQ+R +CSK 
Sbjct: 368 LFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKA 400
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9FX85|PER10_ARATH Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLV5|PER61_ARATH Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=3 SV=1 Back     alignment and function description
>sp|Q67Z07|PER2_ARATH Peroxidase 2 OS=Arabidopsis thaliana GN=PER2 PE=2 SV=1 Back     alignment and function description
>sp|P0DI10|PER1_ARATH Peroxidase 1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1 Back     alignment and function description
>sp|O22862|PER26_ARATH Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|P80679|PERA2_ARMRU Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1 Back     alignment and function description
>sp|Q43872|PER64_ARATH Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
255550010437 Peroxidase 57 precursor, putative [Ricin 0.961 0.864 0.560 1e-129
359482598404 PREDICTED: putative Peroxidase 48-like [ 0.944 0.918 0.593 1e-127
224054354309 predicted protein [Populus trichocarpa] 0.778 0.990 0.687 1e-126
357468385379 Peroxidase A2 [Medicago truncatula] gi|3 0.760 0.788 0.608 6e-99
259016324404 RecName: Full=Putative Peroxidase 48; Sh 0.801 0.779 0.534 9e-99
297798528363 predicted protein [Arabidopsis lyrata su 0.740 0.801 0.546 5e-92
297738229375 unnamed protein product [Vitis vinifera] 0.791 0.829 0.528 2e-91
359473497381 PREDICTED: putative Peroxidase 48 [Vitis 0.791 0.816 0.528 2e-91
334187140401 putative peroxidase 48 [Arabidopsis thal 0.793 0.778 0.501 4e-89
449444262420 PREDICTED: LOW QUALITY PROTEIN: putative 0.788 0.738 0.520 2e-88
>gi|255550010|ref|XP_002516056.1| Peroxidase 57 precursor, putative [Ricinus communis] gi|223544961|gb|EEF46476.1| Peroxidase 57 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/437 (56%), Positives = 302/437 (69%), Gaps = 59/437 (13%)

Query: 2   MRRVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEYAASDPSAFQVVAGALF 61
           M++++ LVF++CI+ISF+NQ  +      +        SF   Y  S  S++ ++  + F
Sbjct: 11  MKKMTVLVFIICILISFRNQTKEI-----MIHNEEIKESFEEYYYTS--SSWDLLP-SFF 62

Query: 62  LSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCF 121
           LS++   +E     RS+EYDFYR+SCPQAE  I+ +VR L+K +  V+PALLRLVFHDCF
Sbjct: 63  LSNE---QEAHPQTRSLEYDFYRNSCPQAEKIIQNVVRELYKVKFSVSPALLRLVFHDCF 119

Query: 122 IEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAR 181
           I GCDASILLD  +G  SEK S PNE+LKGYD+I+ IK ++EE+CPG+VSCADI+ LAAR
Sbjct: 120 IAGCDASILLDAVDGKQSEKDSNPNENLKGYDIIDKIKSQIEEVCPGIVSCADIVVLAAR 179

Query: 182 EGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLL 241
           EGV+ AGGPFYPL+TGR+DS   F+++AT ELPSPNADLSETLASF+SRGFD RETV++L
Sbjct: 180 EGVLQAGGPFYPLFTGRRDSTEPFSNLATNELPSPNADLSETLASFSSRGFDERETVSIL 239

Query: 242 GAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTP--SPPYAL 299
           GAHSIG+IHCKFF NRL++FG +  PDPSLDP FLN LRSKC N S  S  P  SPP+ +
Sbjct: 240 GAHSIGMIHCKFFLNRLYDFGGTYGPDPSLDPQFLNFLRSKC-NTSGASEVPAASPPFDI 298

Query: 300 LASTFDEP---------------------------------------------GINVTYD 314
           L S+  E                                              GIN+ Y+
Sbjct: 299 LVSSSTETSPPHSVMSSAAPPSLSFRGSLSSPPLCTAPSVSFENSLLSSPEDLGINMAYE 358

Query: 315 GHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSN 374
           G    FGT+YYRSLL  RG+LY+DQQLM+GEETGIWVRAYASDVSLFRRDFA AMMKLSN
Sbjct: 359 GPGVDFGTLYYRSLLHGRGILYSDQQLMSGEETGIWVRAYASDVSLFRRDFAQAMMKLSN 418

Query: 375 LRVLTGPMGQIRLNCSK 391
           L VLTG  GQ+R NCSK
Sbjct: 419 LNVLTGSAGQVRRNCSK 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359482598|ref|XP_002279534.2| PREDICTED: putative Peroxidase 48-like [Vitis vinifera] gi|297743272|emb|CBI36139.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054354|ref|XP_002298218.1| predicted protein [Populus trichocarpa] gi|222845476|gb|EEE83023.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357468385|ref|XP_003604477.1| Peroxidase A2 [Medicago truncatula] gi|355505532|gb|AES86674.1| Peroxidase A2 [Medicago truncatula] Back     alignment and taxonomy information
>gi|259016324|sp|O81755.3|PER48_ARATH RecName: Full=Putative Peroxidase 48; Short=Atperox P48; Flags: Precursor Back     alignment and taxonomy information
>gi|297798528|ref|XP_002867148.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297312984|gb|EFH43407.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297738229|emb|CBI27430.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473497|ref|XP_002269658.2| PREDICTED: putative Peroxidase 48 [Vitis vinifera] Back     alignment and taxonomy information
>gi|334187140|ref|NP_195113.2| putative peroxidase 48 [Arabidopsis thaliana] gi|332660886|gb|AEE86286.1| putative peroxidase 48 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449444262|ref|XP_004139894.1| PREDICTED: LOW QUALITY PROTEIN: putative Peroxidase 48-like [Cucumis sativus] gi|449524012|ref|XP_004169017.1| PREDICTED: LOW QUALITY PROTEIN: putative Peroxidase 48-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.524 0.658 0.431 1.1e-56
TAIR|locus:2012156350 AT1G49570 [Arabidopsis thalian 0.755 0.848 0.414 1.6e-56
TAIR|locus:2165820317 PER64 "peroxidase 64" [Arabido 0.511 0.634 0.450 4.2e-55
TAIR|locus:2164366328 AT5G64120 [Arabidopsis thalian 0.557 0.667 0.406 7.9e-55
TAIR|locus:2178682340 AT5G24070 [Arabidopsis thalian 0.768 0.888 0.386 9.9e-55
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.521 0.630 0.443 2.3e-54
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.524 0.641 0.407 7.8e-54
TAIR|locus:2058208335 AT2G43480 [Arabidopsis thalian 0.809 0.949 0.359 1.5e-53
TAIR|locus:2150946329 AT5G15180 [Arabidopsis thalian 0.529 0.632 0.406 6.9e-53
TAIR|locus:2015786349 AT1G30870 [Arabidopsis thalian 0.513 0.578 0.418 2.3e-52
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 468 (169.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 91/211 (43%), Positives = 134/211 (63%)

Query:    75 YRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDA 134
             +  +   FY  SCPQAE  +R +VR        V  ALLR+ FHDCF++GCDAS+L+D  
Sbjct:    21 FAQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDST 80

Query:   135 EGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPL 194
                +SEK + PN S++ +D+I+ IK +LE  CP  VSCADI+ LA R+ V LAGGP Y +
Sbjct:    81 ---NSEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSI 137

Query:   195 YTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFF 254
              TGR+D R++  +   + LP P   +S  ++ F ++G +  + V LLGAH++G  +C  F
Sbjct:   138 PTGRRDGRVS--NNLDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLF 195

Query:   255 NNRLHNFGRSNEPDPSLDPDFLNLLRSKCRN 285
             ++R+ +F  +  PDPS+DP  +  LR+ CRN
Sbjct:   196 SDRITSFQGTGRPDPSMDPALVTSLRNTCRN 226
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0006826 "iron ion transport" evidence=RCA
GO:0010054 "trichoblast differentiation" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2012156 AT1G49570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165820 PER64 "peroxidase 64" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178682 AT5G24070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058208 AT2G43480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015786 AT1G30870 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81755PER48_ARATH1, ., 1, 1, ., 1, ., 70.53450.80150.7797yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-140
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-74
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-58
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-25
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-10
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-09
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 1e-06
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 4e-05
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  399 bits (1029), Expect = e-140
 Identities = 143/312 (45%), Positives = 187/312 (59%), Gaps = 18/312 (5%)

Query: 80  YDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDS 139
             FY  SCP AE  +R++VR   K+   +A ALLRL FHDCF+ GCDAS+LLD      S
Sbjct: 4   VGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTS 63

Query: 140 EKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRK 199
           EK +PPN SL+G+DVI+ IK  LE  CPGVVSCADILALAAR+ VVLAGGP Y +  GR+
Sbjct: 64  EKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRR 123

Query: 200 DSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRLH 259
           D R++ A+     LPSP   +S+ ++ FAS+G  + + V L GAH+IG  HC  F++RL+
Sbjct: 124 DGRVSSAN-DVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSDRLY 182

Query: 260 NFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGHQGG 319
           NF  + +PDP+LDP +   LR KC                     D    N         
Sbjct: 183 NFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTL---------VPLDPGTPNT-------- 225

Query: 320 FGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLT 379
           F   YY++LL  RG+L +DQ L++   T   V  YA++   F RDFA AM+K+ N+ VLT
Sbjct: 226 FDNSYYKNLLAGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285

Query: 380 GPMGQIRLNCSK 391
           G  G+IR NC  
Sbjct: 286 GSQGEIRKNCRV 297

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 393
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.35
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.6e-103  Score=771.44  Aligned_cols=297  Identities=41%  Similarity=0.719  Sum_probs=277.4

Q ss_pred             CCCCCcccccCCCccHHHHHHHHHHHHHhhCCCccchhhhhhhhcccccCCCceEEecCCCCCCCcCCCCCCCCcchhHH
Q 016209           75 YRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNESLKGYDV  154 (393)
Q Consensus        75 ~~~L~~~fY~~sCP~ae~iVr~~V~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLLd~~~~~~~E~~a~~N~~lrg~~v  154 (393)
                      .++|+++||++|||++|+||++.|+++++++|+++|++|||+||||||+||||||||+++   .+||++++|.+||||++
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~~   98 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYDV   98 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHHH
Confidence            356999999999999999999999999999999999999999999999999999999964   37999999999999999


Q ss_pred             HHHHHHHHHhhCCCcccHHHHHHHhhhhhhhhcCCCCcCCCCCccCCCcccccccccCCCCCCCChHHHHHHHHHCCCCc
Q 016209          155 INIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDL  234 (393)
Q Consensus       155 I~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~  234 (393)
                      |++||++||++||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||+|+.++++|++.|+++||+.
T Consensus        99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999877764 89999999999999999999999


Q ss_pred             ccceEEccccccccccccccccccccCCCCC-CCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCccccccccCCCCccccc
Q 016209          235 RETVTLLGAHSIGVIHCKFFNNRLHNFGRSN-EPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTY  313 (393)
Q Consensus       235 ~dlVaLsGAHTIG~ahc~~f~~Rlynf~g~~-~~dp~ld~~y~~~L~~~Cp~~~~~~~~~~~~~~~~p~~f~~~g~~~~~  313 (393)
                      +|||+||||||||++||.+|.+|||||+|++ ++||+||+.|++.|++.||..+....       .         +.+ +
T Consensus       178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~-------~---------~~l-D  240 (324)
T PLN03030        178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSR-------R---------IAL-D  240 (324)
T ss_pred             HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCc-------c---------ccC-C
Confidence            9999999999999999999999999999875 58999999999999999995322110       0         112 3


Q ss_pred             CCCCCccchHHHHhhhcCcccccccccccCCcchHHHHHHHhhch----HHHHHHHHHHHHHHhcCCCCCCCCCeecccc
Q 016209          314 DGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDV----SLFRRDFALAMMKLSNLRVLTGPMGQIRLNC  389 (393)
Q Consensus       314 ~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgvltg~~GeIR~~C  389 (393)
                      ..||.+|||+||+||++++|+|+|||+|+.|++|+++|+.||.|+    +.|+++|++||+|||+|+||||.+|||||+|
T Consensus       241 ~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C  320 (324)
T PLN03030        241 TGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVC  320 (324)
T ss_pred             CCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccc
Confidence            489999999999999999999999999999999999999999875    5999999999999999999999999999999


Q ss_pred             CCC
Q 016209          390 SKG  392 (393)
Q Consensus       390 ~~v  392 (393)
                      ++|
T Consensus       321 ~~v  323 (324)
T PLN03030        321 SAI  323 (324)
T ss_pred             ccc
Confidence            987

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
1sch_A294 Peanut Peroxidase Length = 294 2e-61
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-58
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 5e-57
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-54
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-53
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-52
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-50
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-50
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-50
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-50
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-50
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-50
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-50
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-50
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 4e-50
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-49
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-49
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-48
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 3e-47
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 7e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-09
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-09
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 4e-05
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 5e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  233 bits (593), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 180/315 (57%), Gaps = 25/315 (7%)
Query: 78  MEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGV 137
           +  +FY   CP A  TI++ V       + +  +LLRL FHDCF++GCDAS+LLDD    
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 138 DSEKKSPPN-ESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYT 196
             EK + PN  S++G++VI+ IK ++E +CPGVVSCADILA+AAR+ VV  GG  + +  
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 197 GRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNN 256
           GR+DS  A    A  +LP+P  +LS  +++F+++GF  +E VTL GAH+IG   C  F  
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181
Query: 257 RLHNFGRSNEPDPSLDPDFLNLLRSKCRNIXXXXXXXXXXYALLASTFDEPGINVTYDGH 316
           R++N       + ++DP +   L++ C ++               S FD    N      
Sbjct: 182 RIYN-------ESNIDPTYAKSLQANCPSVGGDTNL---------SPFDVTTPN------ 219
Query: 317 QGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLR 376
              F   YY +L   +G+L++DQQL  G  T   V AY+++ + F  DF  AM+K+ NL 
Sbjct: 220 --KFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLS 277
Query: 377 VLTGPMGQIRLNCSK 391
            LTG  GQIR NC K
Sbjct: 278 PLTGTSGQIRTNCRK 292
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-133
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-131
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-131
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-130
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-128
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-126
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-124
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-64
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-59
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 8e-56
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 5e-55
2e39_A344 Peroxidase; heme protein, coordination geometry of 9e-53
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-50
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 9e-50
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-15
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 9e-12
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  383 bits (987), Expect = e-133
 Identities = 120/313 (38%), Positives = 169/313 (53%), Gaps = 16/313 (5%)

Query: 80  YDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDS 139
             FY  SCP AE  ++  V     + S +AP L+R+ FHDCF+ GCDAS+LLD      +
Sbjct: 4   IGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTA 63

Query: 140 EKKSPPNE-SLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGR 198
           EK + PN  SL+G++VI   K  +E  CP  VSCADILA AAR+   LAG   Y + +GR
Sbjct: 64  EKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGR 123

Query: 199 KDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRL 258
           +D  ++ A  A  ++PSP  + ++ + SFA++     E VTL GAHSIGV HC  F NRL
Sbjct: 124 RDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTNRL 183

Query: 259 HNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGHQG 318
           +NF   +  DP+L P +  LLR+ C   S+     +    L   T               
Sbjct: 184 YNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVS--LDIITPSV------------ 229

Query: 319 GFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVL 378
               +YY  +    G+L +DQ L+        V+A A +++ +   FA AM+K+  + VL
Sbjct: 230 -LDNMYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVL 288

Query: 379 TGPMGQIRLNCSK 391
           TG  G+IR NCS 
Sbjct: 289 TGTQGEIRTNCSV 301
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=2e-106  Score=791.79  Aligned_cols=300  Identities=39%  Similarity=0.669  Sum_probs=284.4

Q ss_pred             CCcccccCCCccHHHHHHHHHHHHHhhCCCccchhhhhhhhcccccCCCceEEecCCCCCCCcCCCCCCC-CcchhHHHH
Q 016209           78 MEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNE-SLKGYDVIN  156 (393)
Q Consensus        78 L~~~fY~~sCP~ae~iVr~~V~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLLd~~~~~~~E~~a~~N~-~lrg~~vI~  156 (393)
                      |+++||++|||++|+|||+.|++++.++|+++|+|||||||||||+||||||||++++++.+|+++++|. +||||++|+
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999988888999999999 799999999


Q ss_pred             HHHHHHHhhCCCcccHHHHHHHhhhhhhhhcCCCCcCCCCCccCCCcccccccccCCCCCCCChHHHHHHHHHCCCCccc
Q 016209          157 IIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRE  236 (393)
Q Consensus       157 ~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~~d  236 (393)
                      .||++||++||++|||||||+||||+||+++|||.|+|++||+|+++++..+++++||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999988888889999999999999999999999999


Q ss_pred             ceEEccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCccccccccCCCCcccccCCC
Q 016209          237 TVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGH  316 (393)
Q Consensus       237 lVaLsGAHTIG~ahc~~f~~Rlynf~g~~~~dp~ld~~y~~~L~~~Cp~~~~~~~~~~~~~~~~p~~f~~~g~~~~~~~T  316 (393)
                      |||||||||||++||.+|.+|||||+|++++||+||+.|++.|++.||.+++.     .+++.+|         + +..|
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~-----~~~~~~~---------l-D~~T  226 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTR-----FTPITVS---------L-DIIT  226 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCT-----TSCCEEE---------S-CSSS
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCC-----CCccccC---------C-CCCC
Confidence            99999999999999999999999999999999999999999999999975430     0111111         2 3489


Q ss_pred             CCccchHHHHhhhcCcccccccccccCCcchHHHHHHHhhchHHHHHHHHHHHHHHhcCCCCCCCCCeeccccCCC
Q 016209          317 QGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKG  392 (393)
Q Consensus       317 p~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltg~~GeIR~~C~~v  392 (393)
                      |.+|||+||+||++++|||+|||+|+.|++|+.+|+.||.|+++|+++|++||+||++|+||||.+||||++|++|
T Consensus       227 P~~FDN~Yy~nL~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~  302 (304)
T 3hdl_A          227 PSVLDNMYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVV  302 (304)
T ss_dssp             TTSCSTHHHHHHHTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBC
T ss_pred             cccccHHHHHHHHhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999987
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 393
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-100
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 3e-96
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 6e-95
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-94
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 5e-90
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 3e-89
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 4e-54
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-52
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 3e-48
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 6e-36
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 7e-36
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 5e-34
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  298 bits (763), Expect = e-100
 Identities = 119/315 (37%), Positives = 184/315 (58%), Gaps = 20/315 (6%)

Query: 80  YDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDS 139
             FYR++CP     +  ++     +   +  +L+RL FHDCF++GCD S+LL++ + ++S
Sbjct: 4   PTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIES 63

Query: 140 EKKSPPN-ESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGR 198
           E+ + PN  S++G DV+N IK  +E  CP  VSCADILA+AA    VL GGP +P+  GR
Sbjct: 64  EQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGR 123

Query: 199 KDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTLLGAHSIGVIHCKFFNNRL 258
           +DS  A   +A   LP+P  +L++  ASFA +G +  + VTL G H+ G   C  F NRL
Sbjct: 124 RDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRL 183

Query: 259 HNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDGHQG 318
           +NF  +  PDP+L+  +L +LR++C      + T      L  ST D+            
Sbjct: 184 YNFSNTGNPDPTLNTTYLEVLRARCPQ----NATGDNLTNLDLSTPDQ------------ 227

Query: 319 GFGTVYYRSLLQNRGVLYADQQLMA--GEETGIWVRAYASDVSLFRRDFALAMMKLSNLR 376
            F   YY +LLQ  G+L +DQ+L +  G +T   V +++S+ + F  +F ++M+K+ N+ 
Sbjct: 228 -FDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIG 286

Query: 377 VLTGPMGQIRLNCSK 391
           VLTG  G+IRL C+ 
Sbjct: 287 VLTGDEGEIRLQCNF 301
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=7.2e-101  Score=752.09  Aligned_cols=299  Identities=38%  Similarity=0.688  Sum_probs=284.4

Q ss_pred             CCCcccccCCCccHHHHHHHHHHHHHhhCCCccchhhhhhhhcccccCCCceEEecCCCCCCCcCCCCCCCC-cchhHHH
Q 016209           77 SMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDCFIEGCDASILLDDAEGVDSEKKSPPNES-LKGYDVI  155 (393)
Q Consensus        77 ~L~~~fY~~sCP~ae~iVr~~V~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLLd~~~~~~~E~~a~~N~~-lrg~~vI  155 (393)
                      ||+++||++|||++|+|||++|++++.+||+++|+||||+||||||+||||||||+++.++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999996 6999999


Q ss_pred             HHHHHHHHhhCCCcccHHHHHHHhhhhhhhhcCCCCcCCCCCccCCCcccccccccCCCCCCCChHHHHHHHHHCCCCcc
Q 016209          156 NIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLR  235 (393)
Q Consensus       156 ~~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~LP~p~~~~~~l~~~F~~~Gl~~~  235 (393)
                      +.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++++.++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998887888999999999999999999999999


Q ss_pred             cceEEccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCccccccccCCCCcccccCC
Q 016209          236 ETVTLLGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPYALLASTFDEPGINVTYDG  315 (393)
Q Consensus       236 dlVaLsGAHTIG~ahc~~f~~Rlynf~g~~~~dp~ld~~y~~~L~~~Cp~~~~~~~~~~~~~~~~p~~f~~~g~~~~~~~  315 (393)
                      |||||+||||||++||.+|.+|+|+|.+++.|||++|+.|+..|++.||..+....       .         +.+ ++.
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~-------~---------~~~-d~~  223 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDN-------L---------TNL-DLS  223 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCC-------E---------EES-CSS
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCc-------c---------ccc-CCC
Confidence            99999999999999999999999999999999999999999999999997643211       0         112 458


Q ss_pred             CCCccchHHHHhhhcCcccccccccccCCc--chHHHHHHHhhchHHHHHHHHHHHHHHhcCCCCCCCCCeeccccCCC
Q 016209          316 HQGGFGTVYYRSLLQNRGVLYADQQLMAGE--ETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKG  392 (393)
Q Consensus       316 Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltg~~GeIR~~C~~v  392 (393)
                      ||.+|||+||+++++++|+|+|||+|+.|+  +|+++|+.||.|+++|+++|++||+||++|+||||.+||||++|++|
T Consensus       224 tp~~fDn~Yy~~l~~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~  302 (304)
T d1fhfa_         224 TPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFV  302 (304)
T ss_dssp             STTSCSTHHHHHHHTTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBC
T ss_pred             CCCccccHHHHHHhhcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCc
Confidence            999999999999999999999999999997  79999999999999999999999999999999999999999999987
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure