Citrus Sinensis ID: 016240

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
Protein Sequence
MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEccEEcccccccEEcccccccccEEEEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccccccEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccHHHHHHcHcccccccccccccccccEEEccEEEccccccEEEEEEccccEEEEEEEcEcHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHHcccccEEEEcccccEEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHHHHHHHccEcccccccccEcccccH
Coil and Loop (DISEMBL)
maarriplllsrsftsssptlfsrgrdSSLCRAAAAAAASCgystassaaaaaedpitppvkvdytqllingqfvdsasgktfptldprtgdvithvaegeAEDVNRAVSAARkafdegpwprmtAYERSKIILRFADLLERHNDEIAaletwdngkpfeqsaqtevpmTTRLFRYYAGWAdkiqgltapadgpyhvqtlhepigvagqiipwnfpLLMFAWKVgpalacgntiVLKTAEQTPLSALYVSKLLheaglppgvlnivsgygptAGAALASHmevdklaftgsttTGKIVLQLAAksnlkpvtlelggkspfivcedaDVDKAAELAHYALFFnqgqcccagsrtfvheSVYDQFVEKANALAMKRvvgdpfkggiqqgpqvnq
Flexible Loop (DISEMBL)
maarriplllsrsftsssptlfsrgrDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAarkafdegpwprmtAYERSKIILRFADLLERHNDEIAAletwdngkpfeqsaqtevpmTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDpfkggiqqgpqvnq
Low Complexity Region (SEG)
MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRaaaaaaascgystassaaaaaEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ
Disordered region (IsUnstruct)
****************************************CG**************ITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAE************ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF****QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP*************
Disordered Region (DISOPRED)
**********************************************************PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ***
Disordered Region (DISEMBL)
MAARRIPLLLSRSFTS*************************************EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ
Disordered Region (DISPRO)
***************************************************AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	392	2.2.26 [Sep-21-2011]
Q9SU63	538	Aldehyde dehydrogenase fa	yes	no	0.974	0.710	0.75	1e-177
Q8S528	534	Aldehyde dehydrogenase fa	no	no	0.892	0.655	0.805	1e-174
P20000	520	Aldehyde dehydrogenase, m	yes	no	0.892	0.673	0.599	1e-120
Q2XQV4	521	Aldehyde dehydrogenase, m	yes	no	0.844	0.635	0.614	1e-119
Q5RF00	517	Aldehyde dehydrogenase, m	yes	no	0.926	0.702	0.579	1e-119
P05091	517	Aldehyde dehydrogenase, m	yes	no	0.926	0.702	0.579	1e-119
P81178	500	Aldehyde dehydrogenase, m	N/A	no	0.882	0.692	0.594	1e-118
Q66HF8	519	Aldehyde dehydrogenase X,	yes	no	0.892	0.674	0.585	1e-118
P47738	519	Aldehyde dehydrogenase, m	yes	no	0.882	0.666	0.594	1e-117
P11884	519	Aldehyde dehydrogenase, m	no	no	0.882	0.666	0.591	1e-117

>sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1

 Score =  620 bits (1598), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 294/392 (75%), Positives = 336/392 (85%), Gaps = 10/392 (2%)

Query: 1   MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
           MAARR+  LLSRSF++SSP LF S+GR+   C                +++AAAE+ I P
Sbjct: 1   MAARRVSSLLSRSFSASSPLLFRSQGRN---CYNGGI------LRRFGTSSAAAEEIINP 51

Query: 60  PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
            V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52  SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111

Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS   E+PM  RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171

Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPL+A Y  KL  EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
            LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           YD+FVEK+ A A+KRVVGDPF+ GI+QGPQ++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQID 383

Possesses activity on acetaldehyde and glycolaldehyde in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2

 Score =  611 bits (1575), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 282/350 (80%), Positives = 317/350 (90%)

Query: 42  GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
           G    S+ AAA E+ ITPPVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI  V+EG+
Sbjct: 30  GAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGD 89

Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
           AEDVNRAV+AARKAFDEGPWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQ
Sbjct: 90  AEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQ 149

Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221
           SAQ EVPM  R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +
Sbjct: 150 SAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLS 209

Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
           WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM
Sbjct: 210 WKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHM 269

Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
           +VDK+AFTGST  GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFF
Sbjct: 270 DVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFF 329

Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           NQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQV+
Sbjct: 330 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVD 379

Possesses activity on acetaldehyde and glycolaldehyde in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2

 Score =  432 bits (1110), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/352 (59%), Positives = 257/352 (73%), Gaps = 2/352 (0%)

Query: 42  GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
           G    S+A  A   P   P +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+
Sbjct: 17  GRRLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGD 75

Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
             DV+RAV AAR AF  G PW RM A ER +++ R ADL+ER    +AALET DNGKP+ 
Sbjct: 76  KADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYI 135

Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
            S   ++ M  +  RYYAGWADK  G T P DG Y   T HEP+GV GQIIPWNFPLLM 
Sbjct: 136 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 195

Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
           AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct: 196 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH 255

Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
            +VDK+AFTGST  G ++   A KSNLK VTLELGGKSP I+  DAD+D A E AH+ALF
Sbjct: 256 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 315

Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           FNQGQCCCAGSRTFV E +Y +FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 316 FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 367

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1

 Score =  430 bits (1105), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/332 (61%), Positives = 251/332 (75%), Gaps = 1/332 (0%)

Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
           ++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF  G P
Sbjct: 37  EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96

Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           W R+ A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGW
Sbjct: 97  WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156

Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
           ADK  G T P DG Y   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216

Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST  G ++  
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
            A KSNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            +FVE++ A A  RVVG+PF    +QGPQ+++
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDE 368

Is capable of converting retinaldehyde to retinoic acid.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/364 (57%), Positives = 260/364 (71%), Gaps = 1/364 (0%)

Query: 30  LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
           + RAAA      G    S+AA  A        +V   Q+ IN ++ D+ S KTFPT++P 
Sbjct: 1   MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60

Query: 90  TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
           TG+VI  VAEG+ EDV++AV AAR AF  G PW RM A  R +++ R ADL+ER    +A
Sbjct: 61  TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120

Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
           ALET DNGKP+  S   ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180

Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
           QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240

Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
           +GPTAGAA+ASH +VDK+AFTGST  G+++   A  SNLK VTLELGGKSP I+  DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300

Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
           D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A  RVVG+PF    +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360

Query: 389 QVNQ 392
           QV++
Sbjct: 361 QVDE 364

Is capable of converting retinaldehyde to retinoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/364 (57%), Positives = 260/364 (71%), Gaps = 1/364 (0%)

Query: 30  LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
           + RAAA      G    S+AA  A        +V   Q+ IN ++ D+ S KTFPT++P 
Sbjct: 1   MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60

Query: 90  TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
           TG+VI  VAEG+ EDV++AV AAR AF  G PW RM A  R +++ R ADL+ER    +A
Sbjct: 61  TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120

Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
           ALET DNGKP+  S   ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180

Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
           QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240

Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
           +GPTAGAA+ASH +VDK+AFTGST  G+++   A  SNLK VTLELGGKSP I+  DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300

Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
           D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A  RVVG+PF    +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360

Query: 389 QVNQ 392
           QV++
Sbjct: 361 QVDE 364

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1

 Score =  424 bits (1089), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 256/348 (73%), Gaps = 2/348 (0%)

Query: 46  ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
           +++A +A   P   P +V   Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG  EDV
Sbjct: 1   SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDV 59

Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
           ++AV AAR AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S  
Sbjct: 60  DKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYL 119

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
            ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 120 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179

Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
           GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VD
Sbjct: 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239

Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
           K+AFTGST  G ++   A  SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQG
Sbjct: 240 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 299

Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           QCCCAGSRTFV E VYD+FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 300 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 347

Mesocricetus auratus (taxid: 10036)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/352 (58%), Positives = 261/352 (74%), Gaps = 2/352 (0%)

Query: 42  GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
           G +T+ S AAA  +PI  P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16  GRTTSYSTAAALPNPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74

Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
             DV+ AV AAR+AF  G PW RM A ER +++ R ADL+ER    +A+LET DNGKPF+
Sbjct: 75  RADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134

Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
           +S   ++    +++RY AGWADK  G T P DG +   T HEP+GV GQIIPWNFPL+M 
Sbjct: 135 ESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194

Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
            WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254

Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
           M+VDK+AFTGST  G ++ + A  SNLK VTLELGGKSP IV  DAD+D A +  H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALF 314

Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           FN GQCCCAGSRTFV ES+Y +F+E+    A KR VG+PF+   QQGPQV++
Sbjct: 315 FNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDK 366

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1

 Score =  423 bits (1087), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/348 (59%), Positives = 256/348 (73%), Gaps = 2/348 (0%)

Query: 46  ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
           +++A +A   P   P +V   Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG  EDV
Sbjct: 20  SAAATSAVPAPNHQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDV 78

Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
           ++AV AAR AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S  
Sbjct: 79  DKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
            ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198

Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
           GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH  VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVD 258

Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
           K+AFTGST  G ++   A  SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318

Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           QCCCAGSRTFV E+VYD+FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 319 QCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 366

Is capable of converting retinaldehyde to retinoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1

 Score =  422 bits (1086), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/348 (59%), Positives = 256/348 (73%), Gaps = 2/348 (0%)

Query: 46  ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
           +++A +A   P   P +V   Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG  EDV
Sbjct: 20  SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDV 78

Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
           ++AV AA+ AF  G PW RM A +R +++ R ADL+ER    +AALET DNGKP+  S  
Sbjct: 79  DKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
            ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198

Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
           GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 258

Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
           K+AFTGST  G ++   A  SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318

Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           QCCCAGSRTFV E VYD+FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 319 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 366

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
224064707	540	predicted protein [Populus trichocarpa]	0.977	0.709	0.781	0.0
356497822	538	PREDICTED: aldehyde dehydrogenase family	0.969	0.706	0.777	0.0
356501653	539	PREDICTED: aldehyde dehydrogenase family	0.961	0.699	0.781	0.0
223452696	534	mitochondrial benzaldehyde dehydrogenase	0.966	0.709	0.769	1e-178
356567618	536	PREDICTED: aldehyde dehydrogenase family	0.887	0.649	0.831	1e-178
225452510	535	PREDICTED: aldehyde dehydrogenase family	0.969	0.710	0.777	1e-178
225424691	538	PREDICTED: aldehyde dehydrogenase family	0.877	0.639	0.845	1e-177
312283557	538	unnamed protein product [Thellungiella h	0.974	0.710	0.752	1e-176
162464260	549	mitochondrial aldehyde dehydrogenase 2 [	0.877	0.626	0.825	1e-176
356526813	536	PREDICTED: aldehyde dehydrogenase family	0.887	0.649	0.818	1e-175

>gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/393 (78%), Positives = 342/393 (87%), Gaps = 10/393 (2%)

Query: 1   MAARRIPLLLSRSFTSSS--PTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPIT 58
           MAA++I  +LSRSF+S++  P  FSR R             S   S  ++  AA EDPIT
Sbjct: 1   MAAKKISTVLSRSFSSAAAPPCFFSRVR--------GGGGQSRLISRYNTTLAAVEDPIT 52

Query: 59  PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
           PPV V Y QLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+ EDVNRAVSAARKAFDE
Sbjct: 53  PPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAFDE 112

Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
           GPWPRMTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYA
Sbjct: 113 GPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYA 172

Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
           GWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPALACGNT+V+KT
Sbjct: 173 GWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKT 232

Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
           AEQTPLSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIV
Sbjct: 233 AEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 292

Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
           L+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE 
Sbjct: 293 LELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHER 352

Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           VYD+FVEKA A A +R VGDPFK GI+QGPQV+
Sbjct: 353 VYDEFVEKAKARANQRAVGDPFKEGIEQGPQVD 385

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/391 (77%), Positives = 345/391 (88%), Gaps = 11/391 (2%)

Query: 2   AARRIPLLLSRSFTSSSPT-LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
           ++ RI  LLSRSF S+S T LFSR            + A     +  S AAA E+PI PP
Sbjct: 3   SSMRISRLLSRSFLSASTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPP 52

Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
           VKV++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GP
Sbjct: 53  VKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGP 112

Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM  RLFRYYAGW
Sbjct: 113 WPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGW 172

Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
           ADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAE
Sbjct: 173 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAE 232

Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           QTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+
Sbjct: 233 QTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLE 292

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 293 LAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVY 352

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           D+F+EKA A A+KR VGDPFKGGI+QGPQ++
Sbjct: 353 DEFIEKAKARALKRAVGDPFKGGIEQGPQID 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max]

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/389 (78%), Positives = 343/389 (88%), Gaps = 12/389 (3%)

Query: 5   RIPLLLSRSFTSSSPT--LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVK 62
           RI  LLSRSF S+S T  LFSR            + A     +  S AAA E+PI PP+K
Sbjct: 6   RISRLLSRSFLSASTTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPPLK 55

Query: 63  VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           V++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GPWP
Sbjct: 56  VEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWP 115

Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
           +MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM  RLFRYYAGWAD
Sbjct: 116 KMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWAD 175

Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
           KI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQT
Sbjct: 176 KIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQT 235

Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LA
Sbjct: 236 PLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELA 295

Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+
Sbjct: 296 ARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 355

Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           F+EKA A A+KR VGDPFKGGI+QGPQ++
Sbjct: 356 FIEKAKARALKRAVGDPFKGGIEQGPQID 384

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus]

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/391 (76%), Positives = 334/391 (85%), Gaps = 12/391 (3%)

Query: 1   MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
           MAA R   LLSRS     P L   G+ S L R          Y   ++AAAA E+PI PP
Sbjct: 1   MAAHRFSSLLSRSV----PLLSRGGKQSYLGRGV--------YRYGTAAAAALEEPIKPP 48

Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
           V V Y +LLINGQFVD+ASGKTFPTLDPR+G+VI HVAEG+AED+NRAV+AARKAFDEGP
Sbjct: 49  VSVQYDKLLINGQFVDAASGKTFPTLDPRSGEVIAHVAEGDAEDINRAVAAARKAFDEGP 108

Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM  RLFRYYAGW
Sbjct: 109 WPKMPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGW 168

Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
           ADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPALACGN++VLKTAE
Sbjct: 169 ADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAE 228

Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           QTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL  HM+VDKLAFTGST TGKIVL+
Sbjct: 229 QTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLE 288

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 289 LSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVY 348

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           D+FVEKA A A+KR VGDPFK G++QGPQV+
Sbjct: 349 DEFVEKAKARALKRTVGDPFKAGMEQGPQVD 379

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max]

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 292/351 (83%), Positives = 325/351 (92%), Gaps = 3/351 (0%)

Query: 41  CGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
           C YST+S   A  E+P+ P V+V++TQLLI+G+FVD+ASGKTFPTLDPRTG+VI HVAEG
Sbjct: 34  CKYSTSS---AIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEG 90

Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
            +EDV+RAV+AARKAFD GPWP+MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+E
Sbjct: 91  HSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYE 150

Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
           Q+A+ EVPM  RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMF
Sbjct: 151 QAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 210

Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
           AWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASH
Sbjct: 211 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASH 270

Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
           MEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALF
Sbjct: 271 MEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALF 330

Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           FNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQ++
Sbjct: 331 FNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQID 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452510|ref|XP_002274863.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296087691|emb|CBI34947.3| unnamed protein product [Vitis vinifera]

 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 304/391 (77%), Positives = 340/391 (86%), Gaps = 11/391 (2%)

Query: 1   MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
           MAA RI  LLS S T++S  L S GR S   R         G S  S+A A  E+PITPP
Sbjct: 1   MAAPRIFSLLSASSTAAS--LRSFGRYSRWGR---------GSSRFSTAVATEEEPITPP 49

Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
           V++DYTQLLING+FVD+ASGKTFPTLDPRTGDVI HVAEGEAED+NRAVSAARKAFDEGP
Sbjct: 50  VQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGP 109

Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+MT YERS I+ RFADLLE+H  EIAALE+WDNGKP+EQ+A  E+PM  R+FRYYAGW
Sbjct: 110 WPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGW 169

Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
           ADKI GLT PADG +HVQTLHEPIGVAGQIIPWNFPLL++ WKVGPALACGNTIVLKTAE
Sbjct: 170 ADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAE 229

Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           QTPLSALY SKLL+EAGLPPGVLN+VSG+GPTAGAAL+SHM+VDKLAFTGST TGKIVL 
Sbjct: 230 QTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLG 289

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           LAAKSNLKPVTLELGGKSPFIVCEDADVDKA EL+H ALF+NQGQ CC+GSRTFVHES+Y
Sbjct: 290 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIY 349

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           D+F+EKA A A+KRVVGDPFK G++QGPQ++
Sbjct: 350 DEFIEKAKARALKRVVGDPFKKGVEQGPQID 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 291/344 (84%), Positives = 319/344 (92%)

Query: 48  SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
           S AA  E+PI P V V+YTQLLINGQFVD+A+GKTF TLDPRTG+VI  VAEG+AEDVNR
Sbjct: 40  STAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNR 99

Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
           AVSAARKAFDEGPWPRM+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EV
Sbjct: 100 AVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEV 159

Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
           P+  RL RYYAGWADKI GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPA
Sbjct: 160 PLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPA 219

Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
           LACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLA
Sbjct: 220 LACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLA 279

Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
           FTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCC
Sbjct: 280 FTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCC 339

Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           CAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQ++
Sbjct: 340 CAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQID 383

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312283557|dbj|BAJ34644.1| unnamed protein product [Thellungiella halophila]

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/392 (75%), Positives = 341/392 (86%), Gaps = 10/392 (2%)

Query: 1   MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
           MAARR+  LL RSF++SSP LF S+GR+   C   +  A   G S+A      AE+ I+P
Sbjct: 1   MAARRVSSLLYRSFSASSPFLFRSQGRN---CYNGSRIARRFGTSSA------AEEIISP 51

Query: 60  PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
            V+V +TQLLI+G FVD+ASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AARKAFDEG
Sbjct: 52  SVQVSHTQLLIDGNFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARKAFDEG 111

Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PWP+MTAYERS+I+LRFADL+E+H++++A+LE+WDNGK +EQ+  +E+PM  RLFRYYAG
Sbjct: 112 PWPKMTAYERSRIMLRFADLVEKHSEQLASLESWDNGKTYEQAKTSEIPMLARLFRYYAG 171

Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKI GLT PADG YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTVPADGNYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPL+A YV KL  EAGLPPGVLNIVSG+GPTAGA+LASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYVGKLFLEAGLPPGVLNIVSGFGPTAGASLASHMDVDKLAFTGSTDTGKVIL 291

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
            LAA SNLKPVTLELGGKSPFIV EDAD++KA ELAH+ALFFNQGQCCCAGSRT+VHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADINKAVELAHFALFFNQGQCCCAGSRTYVHEKV 351

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           YD+FVEKA A A+KRVVGDPFK G +QGPQ++
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGTEQGPQID 383

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|162464260|ref|NP_001105891.1| mitochondrial aldehyde dehydrogenase 2 [Zea mays] gi|12004294|gb|AAG43988.1|AF215823_1 T cytoplasm male sterility restorer factor 2 [Zea mays] gi|1421730|gb|AAC49371.1| RF2 [Zea mays] gi|195637116|gb|ACG38026.1| aldehyde dehydrogenase [Zea mays] gi|223948941|gb|ACN28554.1| unknown [Zea mays] gi|413953663|gb|AFW86312.1| restorer of fertility2 [Zea mays]

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 284/344 (82%), Positives = 320/344 (93%)

Query: 48  SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
           S AAA E+PITP V V+YT+LLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NR
Sbjct: 51  STAAAVEEPITPSVHVNYTKLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINR 110

Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
           AV+AARKAFDEGPWP+MTAYERS+I+LRFADL+E+HNDE+AALETWDNGKP+EQ+AQ EV
Sbjct: 111 AVAAARKAFDEGPWPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAQIEV 170

Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
           PM  RL RYYAGWADKI GL  PADGP+HVQ LHEPIGVAGQIIPWNFPLLM+AWKVGPA
Sbjct: 171 PMVARLMRYYAGWADKIHGLIVPADGPHHVQILHEPIGVAGQIIPWNFPLLMYAWKVGPA 230

Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
           LACGNT+VLKTAEQTPLSALY+SKLLHEAGLP GV+N+VSG+GPTAGAALASHM+VDK+A
Sbjct: 231 LACGNTLVLKTAEQTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKIA 290

Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
           FTGST TGKI+L+LAAKSNLK VTLELGGKSPFI+ +DADVD A ELAH+ALFFNQGQCC
Sbjct: 291 FTGSTDTGKIILELAAKSNLKTVTLELGGKSPFIIMDDADVDHAVELAHFALFFNQGQCC 350

Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           CAGSRTFVHE VYD+FVEKA A A+KRVVGDPF+ G++QGPQ++
Sbjct: 351 CAGSRTFVHERVYDEFVEKAKARALKRVVGDPFRKGVEQGPQID 394

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max]

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 285/348 (81%), Positives = 323/348 (92%)

Query: 44  STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
           S  S++AA  E+PI P ++V++TQLLI+G+FVD+ASGKTF TLDPRTG+VI HVAEG +E
Sbjct: 34  SKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFQTLDPRTGEVIAHVAEGHSE 93

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
           DV+RAVSAARKAFD GPWP+MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A
Sbjct: 94  DVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAA 153

Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
           + EVPM  RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK
Sbjct: 154 KIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 213

Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
           VGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEV
Sbjct: 214 VGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEV 273

Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
           DKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQ
Sbjct: 274 DKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQ 333

Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           GQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQ++
Sbjct: 334 GQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQID 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
TAIR|locus:2034855	534	ALDH2B7 "AT1G23800" [Arabidops	0.964	0.707	0.752	1.8e-158
TAIR|locus:2097845	538	ALDH2B4 "AT3G48000" [Arabidops	0.974	0.710	0.742	1.1e-156
UNIPROTKB|Q2XQV4	521	ALDH2 "Aldehyde dehydrogenase,	0.844	0.635	0.614	2.1e-109
UNIPROTKB|P20000	520	ALDH2 "Aldehyde dehydrogenase,	0.844	0.636	0.617	3.4e-109
UNIPROTKB|F1PBJ8	521	ALDH2 "Uncharacterized protein	0.844	0.635	0.614	1.7e-107
UNIPROTKB|P05091	517	ALDH2 "Aldehyde dehydrogenase,	0.831	0.630	0.614	2.1e-107
ZFIN|ZDB-GENE-030326-5	516	aldh2.2 "aldehyde dehydrogenas	0.841	0.639	0.598	3.5e-107
MGI|MGI:99600	519	Aldh2 "aldehyde dehydrogenase	0.831	0.628	0.617	4.4e-107
UNIPROTKB|E1BT93	519	ALDH2 "Uncharacterized protein	0.852	0.643	0.588	5.7e-107
RGD|69219	519	Aldh2 "aldehyde dehydrogenase	0.831	0.628	0.614	5.7e-107

TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)]

 Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
 Identities = 295/392 (75%), Positives = 334/392 (85%)

Query:     1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
             MA+RR+  LLSRSF SSS ++FS RG +    R                     E+ ITP
Sbjct:     1 MASRRVSSLLSRSFMSSSRSIFSLRGMNRGAQRYSNLAAAV-------------ENTITP 47

Query:    60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
             PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI  V+EG+AEDVNRAV+AARKAFDEG
Sbjct:    48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEG 107

Query:   120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
             PWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM  R+FRYYAG
Sbjct:   108 PWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAG 167

Query:   180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
             WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTA
Sbjct:   168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTA 227

Query:   240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
             EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST  GKI+L
Sbjct:   228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287

Query:   300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
             +LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct:   288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347

Query:   360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
             YD+FVEKA A A+KR VGDPFK GI+QGPQV+
Sbjct:   348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVD 379

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 291/392 (74%), Positives = 330/392 (84%)

Query:     1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
             MAARR+  LLSRSF++SSP LF S+GR+   C                      E+ I P
Sbjct:     1 MAARRVSSLLSRSFSASSPLLFRSQGRN---C------YNGGILRRFGTSSAAAEEIINP 51

Query:    60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
              V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct:    52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111

Query:   120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
             PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS   E+PM  RLFRYYAG
Sbjct:   112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171

Query:   180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
             WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct:   172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231

Query:   240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
             EQTPL+A Y  KL  EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct:   232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291

Query:   300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
              LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct:   292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351

Query:   360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
             YD+FVEK+ A A+KRVVGDPF+ GI+QGPQ++
Sbjct:   352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQID 383

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005524 "ATP binding" evidence=IDA

UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
 Identities = 204/332 (61%), Positives = 251/332 (75%)

Query:    62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
             ++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF  G P
Sbjct:    37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96

Query:   121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
             W R+ A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGW
Sbjct:    97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156

Query:   181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
             ADK  G T P DG Y   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct:   157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216

Query:   241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
             QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST  G ++  
Sbjct:   217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276

Query:   301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
              A KSNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct:   277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336

Query:   361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
              +FVE++ A A  RVVG+PF    +QGPQ+++
Sbjct:   337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDE 368

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
 Identities = 205/332 (61%), Positives = 250/332 (75%)

Query:    62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
             +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+  DV+RAV AAR AF  G P
Sbjct:    36 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95

Query:   121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
             W RM A ER +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGW
Sbjct:    96 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155

Query:   181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
             ADK  G T P DG Y   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct:   156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215

Query:   241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
             QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST  G ++  
Sbjct:   216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275

Query:   301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
              A KSNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct:   276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335

Query:   361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
              +FVE++ A A  RVVG+PF    +QGPQV++
Sbjct:   336 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 367

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
 Identities = 204/332 (61%), Positives = 249/332 (75%)

Query:    62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
             +V Y Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G P
Sbjct:    37 EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 96

Query:   121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
             W RM A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  R  RYYAGW
Sbjct:    97 WRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGW 156

Query:   181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
             ADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN IV+K AE
Sbjct:   157 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAE 216

Query:   241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
             QTPL+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AFTGST  G +V  
Sbjct:   217 QTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQV 276

Query:   301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
              A  SNLK VTLELGGKSP I+  DAD++ A E AH+ALFFNQGQCCCAGSRTFV E VY
Sbjct:   277 AAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVY 336

Query:   361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
              +FVE++ A A  RVVG+PF    +QGPQV++
Sbjct:   337 AEFVERSVARAKSRVVGNPFDSQTEQGPQVDE 368

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 201/327 (61%), Positives = 247/327 (75%)

Query:    67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
             Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM 
Sbjct:    38 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 97

Query:   126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  
Sbjct:    98 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 157

Query:   186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
             G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct:   158 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 217

Query:   246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
             ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  S
Sbjct:   218 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 277

Query:   306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             NLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE
Sbjct:   278 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 337

Query:   366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
             ++ A A  RVVG+PF    +QGPQV++
Sbjct:   338 RSVARAKSRVVGNPFDSKTEQGPQVDE 364

GO:0009055 "electron carrier activity" evidence=TAS

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006066 "alcohol metabolic process" evidence=TAS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006069 "ethanol oxidation" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0042136 "neurotransmitter biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)]

 Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
 Identities = 198/331 (59%), Positives = 249/331 (75%)

Query:    63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PW 121
             V Y ++ IN ++ D+ S KTFPT++P TG++I HVAEG+  DV++AV AAR AF  G PW
Sbjct:    33 VHYNKIFINNEWHDAVSKKTFPTINPATGEIICHVAEGDKADVDKAVKAARDAFKLGSPW 92

Query:   122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
              RM A +R  ++ R AD +ER    +A LET DNGKP+  S   +VPM  +  RYYAGWA
Sbjct:    93 RRMDASQRGLLLSRLADCIERDAAYLAELETLDNGKPYAVSFSVDVPMVVKCMRYYAGWA 152

Query:   182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             DK +G T P DG Y   T HEPIGV GQIIPWNFPLLM AWK+GPALA GNT+V+K AEQ
Sbjct:   153 DKWEGKTIPIDGNYFCYTRHEPIGVCGQIIPWNFPLLMQAWKLGPALATGNTVVMKVAEQ 212

Query:   242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
             TPL+ALY++ L+ E G P GV+NIV G GPTAGAA+ASHM+VDK+AFTGST  G ++ + 
Sbjct:   213 TPLTALYIASLIKEVGFPAGVVNIVPGMGPTAGAAIASHMDVDKVAFTGSTDVGHLIQRA 272

Query:   302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
             ++ SNLK VTLELGGKSP I+  DA++++A E +H ALFFNQGQCCCAG+RTFV ES+YD
Sbjct:   273 SSASNLKKVTLELGGKSPNIILSDANMEEAVEQSHIALFFNQGQCCCAGTRTFVQESIYD 332

Query:   362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             +FVE++   A  R+VGDPF    +QGPQVN+
Sbjct:   333 EFVERSVERAKNRIVGDPFDLNTEQGPQVNE 363

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:2001038 "regulation of cellular response to drug" evidence=IMP

MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
 Identities = 202/327 (61%), Positives = 246/327 (75%)

Query:    67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
             Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG  EDV++AV AAR AF  G PW RM 
Sbjct:    40 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMD 99

Query:   126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  
Sbjct:   100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159

Query:   186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
             G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct:   160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219

Query:   246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
             ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH  VDK+AFTGST  G ++   A  S
Sbjct:   220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSS 279

Query:   306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             NLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E+VYD+FVE
Sbjct:   280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVE 339

Query:   366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
             ++ A A  RVVG+PF    +QGPQV++
Sbjct:   340 RSVARAKSRVVGNPFDSRTEQGPQVDE 366

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070404 "NADH binding" evidence=ISO

UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
 Identities = 197/335 (58%), Positives = 252/335 (75%)

Query:    59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
             P  ++ Y ++ IN ++ D+ S KTFPT++P TG+VI  VAEG+  DV++AV AAR AF  
Sbjct:    32 PSPEIAYNKIFINNEWHDAVSKKTFPTVNPATGEVICQVAEGDKADVDKAVKAARAAFQL 91

Query:   119 G-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
             G PW RM A  R K++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RY+
Sbjct:    92 GSPWRRMDASHRGKLLNRLADLIERDRAYLAALETLDNGKPYSISYLVDLDMVVKCLRYF 151

Query:   178 AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
             AGW+DK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K
Sbjct:   152 AGWSDKFHGKTIPLDGDFFCYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 211

Query:   238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
              AEQTPLSALYV+ L+ EAG PPGV+NI+ GYGPTAGAA+++HM+VDK+AFTGST  G +
Sbjct:   212 VAEQTPLSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAISAHMDVDKVAFTGSTEVGHL 271

Query:   298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
             + + AA+SNLK VTLELGGKSP I+  DAD+D A + AH+ALFFNQGQCCCAGSRT+V E
Sbjct:   272 IKKAAAESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFALFFNQGQCCCAGSRTYVQE 331

Query:   358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
              +Y++FVE++   A  RVVG+PF    +QGPQV++
Sbjct:   332 DIYNEFVERSVEKAKSRVVGNPFDFKTEQGPQVDE 366

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
 Identities = 201/327 (61%), Positives = 246/327 (75%)

Query:    67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMT 125
             Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG  EDV++AV AA+ AF  G PW RM 
Sbjct:    40 QIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMD 99

Query:   126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             A +R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK  
Sbjct:   100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159

Query:   186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
             G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+
Sbjct:   160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219

Query:   246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
             ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G ++   A  S
Sbjct:   220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 279

Query:   306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             NLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E VYD+FVE
Sbjct:   280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVE 339

Query:   366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
             ++ A A  RVVG+PF    +QGPQV++
Sbjct:   340 RSVARAKSRVVGNPFDSRTEQGPQVDE 366

GO:0001889 "liver development" evidence=IEP

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0032570 "response to progesterone stimulus" evidence=IEP

GO:0032870 "cellular response to hormone stimulus" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0035094 "response to nicotine" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0055093 "response to hyperoxia" evidence=IEP

GO:0070404 "NADH binding" evidence=IDA

GO:0071398 "cellular response to fatty acid" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P41751	ALDH_ASPNG	1, ., 2, ., 1, ., 3	0.5280	0.8520	0.6720	yes	no
Q9SU63	AL2B4_ARATH	1, ., 2, ., 1, ., 3	0.75	0.9744	0.7100	yes	no
O34660	ALDH4_BACSU	1, ., 2, ., 1, ., 3	0.5245	0.8290	0.6565	yes	no
P47738	ALDH2_MOUSE	1, ., 2, ., 1, ., 3	0.5948	0.8826	0.6666	yes	no
Q5RF00	ALDH2_PONAB	1, ., 2, ., 1, ., 3	0.5796	0.9260	0.7021	yes	no
P08157	ALDH_EMENI	1, ., 2, ., 1, ., 3	0.5650	0.8443	0.6659	yes	no
O14293	YF19_SCHPO	1, ., 2, ., 1, ., -	0.5088	0.8545	0.6660	yes	no
P20000	ALDH2_BOVIN	1, ., 2, ., 1, ., 3	0.5994	0.8928	0.6730	yes	no
P05091	ALDH2_HUMAN	1, ., 2, ., 1, ., 3	0.5796	0.9260	0.7021	yes	no
Q2XQV4	ALDH2_PIG	1, ., 2, ., 1, ., 3	0.6144	0.8443	0.6353	yes	no
Q66HF8	AL1B1_RAT	1, ., 2, ., 1, ., 3	0.5852	0.8928	0.6743	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	392
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	0.0
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	0.0
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	0.0
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	0.0
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-164
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-153
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-151
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-151
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-141
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-136
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	1e-135
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-132
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-132
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-128
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	1e-124
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-122
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-121
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-121
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-119
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-116
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-114
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-114
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	1e-111
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-110
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-110
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-106
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-105
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	1e-105
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-105
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	1e-105
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-104
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-103
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-102
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-101
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-101
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	1e-100
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-100
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-100
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	1e-98
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-97
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	4e-97
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	2e-94
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	6e-94
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-86
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	2e-86
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	3e-86
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-85
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-85
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	3e-85
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	2e-84
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	1e-81
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	5e-81
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-77
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	6e-77
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	1e-76
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	2e-76
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	1e-74
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	1e-74
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-74
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	2e-73
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	5e-72
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	6e-72
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	4e-71
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	9e-71
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	2e-70
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	4e-70
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	3e-69
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	5e-69
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	5e-68
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	5e-66
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	3e-59
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	6e-59
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	4e-57
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	1e-56
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	7e-55
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-53
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	2e-53
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	1e-50
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	2e-50
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	4e-50
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	5e-48
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-47
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	5e-47
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	3e-45
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	3e-45
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	3e-45
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	3e-44
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	9e-43
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	2e-41
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	5e-41
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	2e-39
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	4e-39
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	9e-37
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	1e-35
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	3e-34
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-33
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	2e-32
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	7e-30
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	2e-29
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	3e-29
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	7e-29
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	3e-28
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	1e-27
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	7e-22
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	9e-20
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	4e-17
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	3e-14
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	1e-13
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	3e-13
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	6e-13
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	8e-11
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	8e-08
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	1e-05
cd07121	429	cd07121, ALDH_EutE, Ethanolamine utilization prote	3e-05
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	3e-04
PRK15398	465	PRK15398, PRK15398, aldehyde dehydrogenase EutE; P	0.002

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  760 bits (1965), Expect = 0.0
 Identities = 322/392 (82%), Positives = 353/392 (90%), Gaps = 10/392 (2%)

Query: 1   MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
           MAARRI  LLSRS ++SS  L  SRGR+    R         G    S+AAAA E+PITP
Sbjct: 1   MAARRISSLLSRSLSASSSALLRSRGRNGGRGR---------GIRRFSTAAAAVEEPITP 51

Query: 60  PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
           PV+V YTQLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+AEDVNRAV+AARKAFDEG
Sbjct: 52  PVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG 111

Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PWP+MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM  RLFRYYAG
Sbjct: 112 PWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAG 171

Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL
Sbjct: 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           +LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           YD+FVEKA A A+KRVVGDPFK G++QGPQ++
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGVEQGPQID 383

Length = 538

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  660 bits (1704), Expect = 0.0
 Identities = 269/330 (81%), Positives = 302/330 (91%)

Query: 63  VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           V +T+L INGQFVD+ASGKTFPT+DPR G+VI HVAEG+AEDV+RAV AARKAFDEGPWP
Sbjct: 1   VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60

Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
           RMT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+   EVP+  RLFRYYAGWAD
Sbjct: 61  RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120

Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
           KI G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPALACGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180

Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PLSAL  +KL  EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST  GKI++QLA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240

Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300

Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           FVEKA A A+KRVVGDPF+ G++QGPQV++
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDK 330

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  586 bits (1513), Expect = 0.0
 Identities = 211/327 (64%), Positives = 257/327 (78%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           T L IN +FVDS SGKTFPT++P T +VI  VAE + EDV+ AV AAR AF+ G W +M 
Sbjct: 4   TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             ER +++ + ADL+ER  DE+AALE+ DNGKP E+SA+ +V ++ +  RYYAGWADKIQ
Sbjct: 64  PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123

Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           G T P DG +   T  EPIGV GQIIPWNFPLLM AWK+ PALA GNT+VLK AEQTPLS
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           ALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST  G+ +++ AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           NLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+FVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303

Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           K  A A KRVVGDPF     QGPQV++
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSK 330

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  545 bits (1405), Expect = 0.0
 Identities = 202/333 (60%), Positives = 254/333 (76%), Gaps = 1/333 (0%)

Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
            ++ YT++ IN ++ DS SGKTFPT++P TG+ I  V EG+  DV++AV AAR AF  G 
Sbjct: 2   PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61

Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PW  M A ER +++ + ADL+ER    +A+LET DNGKPF +S   ++P   ++ RYYAG
Sbjct: 62  PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121

Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKI G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+ PALACGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AFTGST  GK++ 
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           Q A KSNLK VTLELGGKSP IV  DAD+D A E AH ALFFN GQCCCAGSRTFV ES+
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           YD+FV+++   A KRVVG+PF    +QGPQ+++
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDE 334

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  470 bits (1211), Expect = e-164
 Identities = 188/331 (56%), Positives = 243/331 (73%)

Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           ++ +T+L ING+FVD+ASGKTF T DPRTG+VI  +AEG+ EDV+ AV AAR+AFD GPW
Sbjct: 17  EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76

Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           PRM+ +ER +I+++FADL+E H +E+AAL+T D GK F      ++P    L RYYAG A
Sbjct: 77  PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136

Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           DKI G T          TL EPIGV G IIPWNFP  MF  KV PALA G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPLSAL+ + L   AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST  G+ ++Q 
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           AA SNLK V+LELGGKSP ++ +DADVD A +LA   +F+N+G+ C A SR +V E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +FV+K    A   VVGDPF    +QGPQV++
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDK 347

Length = 501

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  442 bits (1138), Expect = e-153
 Identities = 174/335 (51%), Positives = 226/335 (67%), Gaps = 6/335 (1%)

Query: 62  KVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
              Y Q   L IN +FV S+ G+T  T++P TG+VI  V     EDV++AV AARKAF E
Sbjct: 1   GKSYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-E 59

Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
             W ++T  ER +++ + ADL+E++ D +AA+E  D+GKP+  +A  ++     + RYYA
Sbjct: 60  SWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYA 119

Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
           GWADKIQG T P        TLHEP GV GQIIPWN+PL M AWK+ PALA GNT+V+K 
Sbjct: 120 GWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179

Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
           AE TPLS LY + L+ EAG PPGV+NI+ GYG  AG+ALA H +VDK+AFTGST TG++V
Sbjct: 180 AENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239

Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
           ++ AA  NLK VTLE GGKSP +V EDAD+D+A + A   + +N GQ C A SR +V ES
Sbjct: 240 MKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQES 298

Query: 359 VYDQFVEKANALAMKR-VVGDPFKGGIQQGPQVNQ 392
           +YD+FVEK      +   VG PF      GPQV++
Sbjct: 299 IYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSK 333

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  435 bits (1121), Expect = e-151
 Identities = 165/319 (51%), Positives = 210/319 (65%), Gaps = 5/319 (1%)

Query: 74  FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
           +VDS S +T   ++P TG+VI  V    AEDV+ AV+AAR AF    W +    ER+ I+
Sbjct: 1   WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57

Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
           L+ ADLLE   DE+A LET + GKP  + A+ EVP      RYYAG A K++G T P+D 
Sbjct: 58  LKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARKLEGETLPSDP 116

Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
                T  EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E TPL+AL +++L 
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176

Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
            EAGLPPGVLN+V+G G   G AL  H +VDK++FTGST  G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235

Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373
           LGGK+P IV +DAD+D A E A +  F N GQ C AGSR  VHES+YD+FVE+    A  
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295

Query: 374 RVVGDPFKGGIQQGPQVNQ 392
             VGDP       GP +++
Sbjct: 296 LKVGDPLDPDTDIGPLISK 314

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  435 bits (1120), Expect = e-151
 Identities = 180/328 (54%), Positives = 225/328 (68%), Gaps = 2/328 (0%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-M 124
           T L ING+FVDS  G T    +P TG +IT +AE    DV+ AV  A  AF E  W   +
Sbjct: 7   TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKV 65

Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
           +  +R + + + ADL+ER+ D +A++E  DNGK F  + + +V  +   FRYY GWADKI
Sbjct: 66  SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125

Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G     D      T HEPIGV GQIIPWNFPLLM AWK+ PALA GNTIVLK +E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           SALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGST  G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP IV +DAD++ A     Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           ++    A K  VGDPF     QGPQV+Q
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQ 333

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  410 bits (1057), Expect = e-141
 Identities = 164/316 (51%), Positives = 212/316 (67%), Gaps = 5/316 (1%)

Query: 80  GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
           G+TF T++P TG V+  VA  +A DV+RAV+AAR+AF+ G W R++  ER  ++LR ADL
Sbjct: 1   GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60

Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
           +E H DE+A LET D GKP   +   +VP     FR+YA   DK+ G  AP         
Sbjct: 61  IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT--GPDALA 118

Query: 200 L--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
           L   EP+GV G ++PWNFPLLM AWK+ PALA GN++VLK AEQ+PL+AL +++L  EAG
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAG 178

Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
           LP GVLN+V G+G TAG AL  HM+VD LAFTGST  G+  L+ + +SNLK V LE GGK
Sbjct: 179 LPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238

Query: 318 SPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
           SP IV  DA D+D AAE A   +F+NQG+ C AGSR  VHES+ D+F+EK  A A +   
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298

Query: 377 GDPFKGGIQQGPQVNQ 392
           GDP     + G  V++
Sbjct: 299 GDPLDPATRMGALVSE 314

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  398 bits (1024), Expect = e-136
 Identities = 167/327 (51%), Positives = 214/327 (65%), Gaps = 6/327 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +LLI+G++VD AS  T   ++P TG+VI  V    AEDV+ AV+AAR AF+   W R++
Sbjct: 1   YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+ R ADLLE   +E+AAL T + GKP  + A+ E+       RYYA  A +++
Sbjct: 57  AEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARRLE 115

Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           G T P D         EP+GV G I PWNFPL + AWK+ PALA GNT+VLK +EQTPLS
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L  EAGLP GVLN+V+G G   G AL +H +VD ++FTGST  G+ +   AA  
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           NLKPVTLELGGKSP IV EDAD+D A + A +  FFN GQ C A SR  VHESVYD+FVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294

Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +  A A    VGDP       GP +++
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISE 321

Length = 472

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  395 bits (1018), Expect = e-135
 Identities = 147/322 (45%), Positives = 205/322 (63%), Gaps = 2/322 (0%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           I+G++V++ASGKT   ++P  G+VI  V EG AED  RA++AAR+AFD G WP + A ER
Sbjct: 2   IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61

Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           + ++ R AD +    +E+A LET + GK   +S + ++      FRYYAG A K  G   
Sbjct: 62  AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120

Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
                   +T+ EP+GV G I PWN+PLL  AWK+ PALA GNT+V+K +E TPL+ + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180

Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
            +L+ EAGLP GV+N+V+G G T GA LA   +VD ++FTG T TG+ +++ AA  N+K 
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239

Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
           V LELGGK+P IV  DAD + A + A   +FFN GQ C AGSR  V ES++D+FV     
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299

Query: 370 LAMKRVVGDPFKGGIQQGPQVN 391
            A K  +G+      + GP V+
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVS 321

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  386 bits (995), Expect = e-132
 Identities = 147/288 (51%), Positives = 188/288 (65%), Gaps = 5/288 (1%)

Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
           + AV+AAR AF    W  +   ER+ I+ + ADLLE   +E+AALET + GKP  + A  
Sbjct: 1   DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALG 57

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKV 224
           EV      FRYYAG A ++ G   P+  P  +     EP+GV G I PWNFPLL+ AWK+
Sbjct: 58  EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117

Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
            PALA GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G   GAALASH  VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177

Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
           K++FTGST  GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A +  F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236

Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           Q C A SR  VHES+YD+FVE+         VG+P       GP ++ 
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISA 284

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  386 bits (994), Expect = e-132
 Identities = 156/310 (50%), Positives = 196/310 (63%), Gaps = 5/310 (1%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           +++P TG+    V E  A DV+RAV+AAR AF+ G W ++T  ER K++ R ADL+E + 
Sbjct: 1   SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60

Query: 145 DEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 202
           +E+A LET DNGK   E  AQ  V      +RYYAG ADKI+G   P D G Y   T  E
Sbjct: 61  EELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118

Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262
           P+GV   I PWN PLL+ A K+ PALA GNT+VLK +E TP S L ++KL  EAG PPGV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178

Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
           +N+V+G+GP  G AL  H  V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIV 237

Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
            +DAD+D A       +F   GQ C AGSR  V  S+YD+FVE+  A A    VGDP   
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297

Query: 383 GIQQGPQVNQ 392
             Q GP   +
Sbjct: 298 ETQMGPLATE 307

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  376 bits (967), Expect = e-128
 Identities = 164/308 (53%), Positives = 210/308 (68%), Gaps = 3/308 (0%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           TL+P TG++I  VA+  AEDV+ AV+AAR AF+   W  M   ER +I+ R A+L+  + 
Sbjct: 1   TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
           DE+A LE+ D GKP   + + +VP     FRYYAGWADKI+G   P  GP+   T+ EP+
Sbjct: 59  DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV G I+PWNFPL+  AWKV PALA GNT+VLK AE TPLSAL +++L+ EAG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +V+G+G  AGAAL  H +VDK+ FTGST  G+ ++Q  A  NLK V+LELGGKS  IV  
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFA 237

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD+D A   A   +F+NQGQ C AGSR  VHES+YD+F+E+  +LA     GDP     
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297

Query: 385 QQGPQVNQ 392
           Q GP V+Q
Sbjct: 298 QMGPLVSQ 305

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  365 bits (940), Expect = e-124
 Identities = 142/308 (46%), Positives = 205/308 (66%), Gaps = 3/308 (0%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
             +P TG+V+  V EG A +V+ AV+AA++AF    W RM+  ER++I+ + ADL+E   
Sbjct: 1   NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
           DE+A LE+ D GKP   +   ++P     FR++A +  ++ G + P DG      L +P+
Sbjct: 59  DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GVAG I PWN PL++  WK+ PALA GNT+VLK +E TPL+A  +++L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA  NLKPV+LELGGK+P IV  
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD+D+A + A  + F N G+ C AGSR  V  S+YD+F+E+    A    VGDP     
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297

Query: 385 QQGPQVNQ 392
           + GP +++
Sbjct: 298 EVGPLISK 305

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  362 bits (931), Expect = e-122
 Identities = 156/328 (47%), Positives = 215/328 (65%), Gaps = 4/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            QL ING+FVD+  GKT+ T++P  G VI  V+    EDV+RAV+AA++AF+ G W +M 
Sbjct: 6   HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A +R +++ R ADL+E H +E+A +E+ D+G  +  + +T V M+ + FRY+AGW DKIQ
Sbjct: 66  ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125

Query: 186 GLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           G T P +   P    TL   EPIGV G +IPWN+PL+M AWK+   LA GNT+VLK A+ 
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL  ++L  +AG P GV+NI+ G G   G  L+ H +V KL FTGST  GK +++ 
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
            A SNLK V+LELGGKSP I+  D D+DKA  +   ++FFN+G+ C A  R FV ES++D
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQ 389
           +FV +      K  +GDP       GPQ
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQ 333

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  358 bits (920), Expect = e-121
 Identities = 145/292 (49%), Positives = 186/292 (63%), Gaps = 3/292 (1%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
            DP TG+V   +A G A DV+RAV AAR+AF E  W R++  ER +++LR A L+  H D
Sbjct: 2   FDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHAD 60

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG 205
           E+A LE+ D GKP  Q A+ +V    R F YY G ADK+ G T P    Y V T+ EP G
Sbjct: 61  ELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119

Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
           V G IIPWN+PL +    V PALA GN +V+K AE  PL+AL +++L  EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179

Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
           V+G G  AGAAL +H  VD ++FTGS  TG  V++ AA+ N+ PVTLELGGKSP IV  D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFAD 238

Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
           AD++ A  +   A+  N GQ C AGSR  VH S+YD+ +E+         VG
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  358 bits (921), Expect = e-121
 Identities = 148/331 (44%), Positives = 200/331 (60%), Gaps = 9/331 (2%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
              ING++V  + G+ F   +P  G V+  +    AEDV+ AV AA +AF    W + + 
Sbjct: 2   DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER+ I+ + AD +E + + +A  ET DNGKP  ++   ++P+    FRY+AG     +G
Sbjct: 60  AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
             +  D        HEP+GV GQIIPWNFPLLM AWK+ PALA GNT+VLK A QTPLS 
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           L + +L+ +  LP GV+N+V+G+G  AG  LASH  + KLAFTGSTT G++++Q AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237

Query: 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           L PVTLELGGKSP I  +DA     D D  AE       FNQG+ C   SR  V ES+YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +F+E+A        VG+P       G QV++
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSK 328

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  349 bits (898), Expect = e-119
 Identities = 144/257 (56%), Positives = 175/257 (68%), Gaps = 5/257 (1%)

Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
           AAR AF    W  +   ER+ I+ + ADLLE   +E+AALET + GKP  + A  EV   
Sbjct: 2   AARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARA 58

Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
              FRY AG ADK+ G   P+  P        EP+GV G I PWNFPLL+ AWK+ PALA
Sbjct: 59  IDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118

Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
            GNT+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G   GAAL SH  VDK++FT
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFT 178

Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
           GST  GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A +  FFN GQ C A
Sbjct: 179 GSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237

Query: 350 GSRTFVHESVYDQFVEK 366
            SR  VHES+YD+FVEK
Sbjct: 238 ASRLLVHESIYDEFVEK 254

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  346 bits (891), Expect = e-116
 Identities = 142/324 (43%), Positives = 195/324 (60%), Gaps = 5/324 (1%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           ING+FV S+SG+T   L+P TG+V+  V    AED +RAV AA  A     W R+ A ER
Sbjct: 2   INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59

Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           +  + + ADL+  + DE+A L   + GK     A+ EV  T     Y A WA +I+G   
Sbjct: 60  AAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRIEGEII 118

Query: 190 PADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
           P+D P  ++     PIGV   I+PWNFP  + A K+ PAL  GNTIV+K +E+TPL+AL 
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178

Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
            ++L+ EAGLP GVLNIV+G G   G AL +H +V  ++ TGST  G+ +++ AA+ N+ 
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237

Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
            V+LELGGK+P IV +DAD+D A +    +   N GQ C    R +VHE +YD+F+EK  
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297

Query: 369 ALAMKRVVGDPFKGGIQQGPQVNQ 392
                  VGDPF      GP VN+
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNE 321

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  340 bits (875), Expect = e-114
 Identities = 134/308 (43%), Positives = 187/308 (60%), Gaps = 5/308 (1%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
           ++P TG+VI  V +  A D + A+ AA  AF    W + TA ER+ I+ R+ADL+    +
Sbjct: 2   INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAE 59

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPI 204
           ++A L T + GKP  + A+ EV        ++A  A +I G T P+  P   +  + +P+
Sbjct: 60  DLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV   I PWNFP  M   K+ PALA G T+VLK AE+TPLSAL +++L  EAGLP GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +V+G     G AL +   V K++FTGST  GK+++  AA   +K V+LELGG +PFIV +
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD+DKA + A  + F N GQ C   +R +VHES+YD+FVEK      K  VG+    G 
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297

Query: 385 QQGPQVNQ 392
             GP +N+
Sbjct: 298 DMGPLINE 305

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  340 bits (875), Expect = e-114
 Identities = 139/328 (42%), Positives = 193/328 (58%), Gaps = 6/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           T+LLING+ V    G+  P  +P TG+V+  +AE  A  V+ AV+AA  AF E  W + T
Sbjct: 3   TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             ER++ +L+ AD +E + DE A LE+ + GKP   +   E+P    +FR++AG A  ++
Sbjct: 60  PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119

Query: 186 GLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G  A      H   +  +P+GV   I PWN+PL+M AWK+ PALA GNT+VLK +E TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +AL +++L  +  LPPGVLN+V+G G T G AL  H +V  ++ TGS  TGK VL  AA 
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           S +K   LELGGK+P IV +DAD+D   E      ++N GQ C A  R +    +YD  V
Sbjct: 239 S-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLV 297

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            K  A      VGDP     + GP ++ 
Sbjct: 298 AKLAAAVATLKVGDPDDEDTELGPLISA 325

Length = 475

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  334 bits (858), Expect = e-111
 Identities = 147/326 (45%), Positives = 202/326 (61%), Gaps = 4/326 (1%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
            L ING++V  +SG+T  + +P  G+ ++ + +    DV+RAV AA++AF    W + T 
Sbjct: 2   GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTV 59

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER+ I+ + AD+++ + + +A +ET DNGKP  ++   ++P+    FRY+AG     +G
Sbjct: 60  AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
                D       L EPIGV GQIIPWNFP LM AWK+ PALA GNT+V+K +  T LS 
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           L ++K++ +  LP GV+NIV+G G  +G  L +H  +DKLAFTGST  G+ V   AAK  
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           L P TLELGGKS  I+ +DA+ DKA E A   + FNQGQ CCAGSR FV E +YD+FV K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297

Query: 367 ANALAMKRVVGDPFKGGIQQGPQVNQ 392
                    VG+P     Q G QVN+
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNK 323

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  331 bits (851), Expect = e-110
 Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 14/325 (4%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
             ING++V   + K+FPT++P TG+V+  V + E EDV+ AV+AAR AF+   W  +  +
Sbjct: 24  HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
            R++ + R A  +++H    A LE+ DNGKP  +S   ++P+  R F ++AGWA  +   
Sbjct: 82  VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD-- 139

Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
           T  A          +P+GV GQI+PWNFPLLM AWK+ PALA GNT+VLK AE TPL+AL
Sbjct: 140 TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191

Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
             +++  EAGLPPGVLNIV+G G   G+ALA+H  VDK+AFTGST  G+ + +  A +  
Sbjct: 192 LFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249

Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K ++LELGGKSPFIV +DAD+D A E    A++FNQGQ CCAGSR  V ESV ++ + K 
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309

Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
                   VGDP    I  G  V+ 
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDP 334

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  331 bits (850), Expect = e-110
 Identities = 137/324 (42%), Positives = 195/324 (60%), Gaps = 4/324 (1%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
            L I+G +V++ SG+TF  ++P TG+V+  V      DV  AV++A++      W  MTA
Sbjct: 8   SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ERS+I+ R  D+L   NDE+AALET D GKP ++++  ++     +  YYAG A  ++G
Sbjct: 66  MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
              P  G   V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E TPL+A
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           L ++++  EAGLP GV N+V G G   GA L  H ++ K++FTG   TGK V+  AA S 
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           LK VT+ELGGKSP IV +DAD+D+AA++A  A F++ GQ C  G+R FV +S+   F  +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303

Query: 367 ANALAMKRVVGDPFKGGIQQGPQV 390
                 +  +GDP       GP V
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLV 327

Length = 488

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  321 bits (826), Expect = e-106
 Identities = 133/325 (40%), Positives = 179/325 (55%), Gaps = 7/325 (2%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
             I+G +V  A  +T   ++P T +VI  V  G A DV+RAV+AAR+AF    W   +  
Sbjct: 1   FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER+ ++ R A+  E   DE+A   T + G P   +   +V +     R  A      +  
Sbjct: 59  ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118

Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
                G   V  + EPIGV G I PWN+PL     KV PALA G T+VLK +E  PLSA+
Sbjct: 119 ERR--GNSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174

Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            ++++L EAGLP GV N+V+G GP  G AL++H +VD ++FTGST  GK V + AA + +
Sbjct: 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-V 233

Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K V LELGGKS  I+ +DAD++KA      A F N GQ C A +R  V  S Y +  E A
Sbjct: 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293

Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
            A A   VVGDP       GP  + 
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASA 318

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  318 bits (817), Expect = e-105
 Identities = 145/312 (46%), Positives = 196/312 (62%), Gaps = 8/312 (2%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
            ++P T   I  +    AEDV+ AV AAR+AF    W + T  ER+K +   A+ +    
Sbjct: 1   VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTL 200
           +E+A LE  DNGKP ++ A  +V      F YYA  A+++      A       +  +  
Sbjct: 59  EELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117

Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
            EP+GV G I PWNFPLLM AWKV PALA G T+VLK +E T L+ L ++++  EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177

Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
           GVLN+V+G G  AGA LA+H  +DK++FTGST TG  V+Q AA+ ++KPV+LELGGKSP 
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236

Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
           IV +DAD++KA E A +  F+N GQ C A SR  VHES+ D F+E+    A    VGDP 
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296

Query: 381 KGGIQQGPQVNQ 392
           + G++ GP V+Q
Sbjct: 297 EEGVRLGPLVSQ 308

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  318 bits (817), Expect = e-105
 Identities = 136/308 (44%), Positives = 183/308 (59%), Gaps = 5/308 (1%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
            ++P TG+V+  V    AEDV+ AV +A+ A  E  W   +  ER +I+ + ADLL   N
Sbjct: 1   VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
           DEIA LET DNGKP E  A+ ++  +     YYAG A  + G   P  G     T  EP+
Sbjct: 59  DEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV   I  WN+P+ + +WK  PALACGN +V K +  TPL+AL ++++L EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +V G G T G  L  H +V K++FTGS  TGK V+  AAK  +K VTLELGGKSP I+ +
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD++ A   A  A F +QGQ C  G+R FV  S+ D+F E+      K  +GDP     
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295

Query: 385 QQGPQVNQ 392
           Q G  +++
Sbjct: 296 QMGALISE 303

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  318 bits (817), Expect = e-105
 Identities = 135/328 (41%), Positives = 177/328 (53%), Gaps = 7/328 (2%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           L I G++V  +  +T   + P T +V+  V E    DV+ AV+AAR+AFD GPWPR++  
Sbjct: 1   LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---I 184
           ER+ ++ R AD LE   DE+A L T +NG P   S + + P    L RYYA  A      
Sbjct: 61  ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120

Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           +       G   V    EP+GV   I+PWN PL + A K+ PALA G T+VLK + +TPL
Sbjct: 121 ERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
            A  +++   EAGLPPGV+N+V       G  L  H  VDK++FTGST  G+ +  +   
Sbjct: 179 DAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG- 236

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             L  VTLELGGKS  IV +DAD+D A      A   N GQ C A +R  V  S YD+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E   A      VGDP     Q GP  + 
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASA 324

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  318 bits (816), Expect = e-105
 Identities = 139/316 (43%), Positives = 198/316 (62%), Gaps = 1/316 (0%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +L ING++  +A  +TF T+DP T   +  +A G++ D++RAVSAAR  F+ G W   +
Sbjct: 20  NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             +R  ++ + ADL+E H +E+A LET D GKP   S + ++P   R  R+YA   DK+ 
Sbjct: 80  PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139

Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           G  A          + EP+GV   I+PWNFPLL+  WK+GPALA GN+++LK +E++PLS
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           A+ ++ L  EAGLP GVLN+V+G+G  AG AL+ H ++D +AFTGST TGK +L+ A  S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259

Query: 306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           N+K V LE GGKS  IV  D  D+ +AA      +F+NQGQ C AG+R  + ES+ D+F+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319

Query: 365 EKANALAMKRVVGDPF 380
                 A     G P 
Sbjct: 320 ALLKQQAQNWQPGHPL 335

Length = 494

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  316 bits (811), Expect = e-104
 Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 3/321 (0%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           I+G++V+ ++G T   ++P  G+VI  V     EDV RA++AAR+A  E  W  M+  ER
Sbjct: 2   IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59

Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
            +I+ R ADL+   N+E+A LET D GK  +++   ++     +F ++AG A  + G   
Sbjct: 60  GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119

Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
           P  GP    T+ EP+GV   I  WN+PL + +WK+ PALA GN +V K +E TPL+AL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179

Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
           ++++ EAGLP GV N+V G G   G  L +H +V K++FTG   TGK ++  AA  +LK 
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238

Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
           VT+ELGGKSP IV +DAD++ A + A    FF+ GQ C  G+R FVH+ + ++F+ +   
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298

Query: 370 LAMKRVVGDPFKGGIQQGPQV 390
              +  +GDPF    + GP +
Sbjct: 299 RTERIKLGDPFDEATEMGPLI 319

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  311 bits (799), Expect = e-103
 Identities = 143/305 (46%), Positives = 195/305 (63%), Gaps = 3/305 (0%)

Query: 88  PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
           P  G V+   AEG  EDV+ AV+AARKAFD+GPWPRM+  ER+ ++L+ ADL+    + +
Sbjct: 4   PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63

Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGV 206
           A +ET ++GKP  Q A+ E+     L+RY A  A  + G +    G   +   L EPIGV
Sbjct: 64  ALIETLESGKPISQ-ARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122

Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
            G I PWNFP L+ + K+  ALA G T+V+K +E T  + L +++LL EAGLP GV+NIV
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182

Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
           +GYG T G A+  H +VD ++FTGST  GK +   AA+ NLK V+LELGGK+P IV  DA
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADA 241

Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
           D+D AA+   + ++FN G+CC +GSR  VHES+ D FV    A + K  VGDP     + 
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301

Query: 387 GPQVN 391
           G  +N
Sbjct: 302 GAIIN 306

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  310 bits (796), Expect = e-102
 Identities = 141/307 (45%), Positives = 185/307 (60%), Gaps = 5/307 (1%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
           +DP TG+ I  V +  A DV+ AV+AA  AF    W R T  ERSK +L+ AD +E + +
Sbjct: 2   VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPI 204
           E+AALE+ + GKP       E+P     FR++AG A  ++G  A    P H   +  EPI
Sbjct: 60  ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPI 119

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV  QI PWN+PL+M AWK+ PALA GNT+VLK +E TPL+ L +++L  E  LPPGV+N
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +V G G +AG AL +H  V  ++ TGS  TGK V + AA   LK V LELGGK+P IV +
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFD 237

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD+D A      A ++N GQ C A  R +VHESVYD+FV           VGDP     
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297

Query: 385 QQGPQVN 391
           + GP  +
Sbjct: 298 EMGPLNS 304

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  309 bits (792), Expect = e-101
 Identities = 138/326 (42%), Positives = 197/326 (60%), Gaps = 6/326 (1%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
             I+G+FV S SG+TF TL P T +V+  VA G A DV+RA  AA++AF    W  + A 
Sbjct: 3   HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKAA 60

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
           ER + + + ADL+E+H DEIA LE  D G+P  Q+ Q +V      FR++A    + + G
Sbjct: 61  ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDG 119

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
            T P D   +  T+  P+G  G I PWN P ++  WK+ PALA GNT+VLK AE +PL+A
Sbjct: 120 RTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
             ++++  EAGLP GV N+V G+G  AG AL +H +V  ++FTG T TG I+++  A + 
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           LK  ++ELGGKSP IV +DAD+++A +   + +F   G+ C A SR  V ES+ + FVEK
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297

Query: 367 ANALAMKRVVGDPFKGGIQQGPQVNQ 392
                    VG P     + GP ++ 
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHP 323

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  306 bits (787), Expect = e-101
 Identities = 137/326 (42%), Positives = 188/326 (57%), Gaps = 8/326 (2%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
            I+G++V    G+     +P  T DV+   A   AED + A++AA  AF    W R +  
Sbjct: 4   YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
            R+ I+ +  D LE   +E+A L T + GK   + A+ EV    ++FRYYAG A ++ G 
Sbjct: 60  ARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALRLSGE 118

Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
           T P+  P   V+T  EP+GV G I PWNFP+ + AWK+ PALA GNT+V K AE TP SA
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
             + ++L EAGLP GV N+V G G   G AL  H +VD ++FTGST  G+ +   AA + 
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-AR 237

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
              V LE+GGK+P +V +DAD+D A E A    FF+ GQ C A SR  V E ++D+FVE 
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297

Query: 367 ANALAMKRVVGDPFKGGIQQGPQVNQ 392
                    VGD    G+  GP V++
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSE 323

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  305 bits (782), Expect = e-100
 Identities = 139/330 (42%), Positives = 193/330 (58%), Gaps = 13/330 (3%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           I G++V    G+ F  + P TG V   V    AED+  A+ AA  A +   W + +  ER
Sbjct: 5   IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAER 62

Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           + I+ + AD +E + + +A  ETWDNGKP  ++   ++P+    FRY+AG     +G  +
Sbjct: 63  ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122

Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
             D        HEP+GV GQIIPWNFPLLM  WK+ PALA GN +VLK AEQTP S L +
Sbjct: 123 EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182

Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
            +L+ +  LPPGV+N+V+G+G  AG  LAS   + K+AFTG TTTG++++Q A++ N+ P
Sbjct: 183 MELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIP 240

Query: 310 VTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQ 362
           VTLELGGKSP I         DA  DKA E   + +F  NQG+ C   SR  + ES+YD+
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQESIYDR 298

Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           F+E+A         G+P       G Q + 
Sbjct: 299 FMERALERVKAIKQGNPLDTETMIGAQASL 328

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  305 bits (783), Expect = e-100
 Identities = 148/344 (43%), Positives = 197/344 (57%), Gaps = 13/344 (3%)

Query: 56  PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
            I  P +    QL I G++ +   GK  P ++P T + I  +    AEDV+ AV AARKA
Sbjct: 2   AIPVPRR----QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKA 57

Query: 116 FDE---GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR 172
           F       W R T   R+K +   A  +     E+A LET D GKP +++A     +   
Sbjct: 58  FKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG- 116

Query: 173 LFRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
            F YYA  A+ +     AP   P   +    L EP+GV G I PWN+PLLM  WKV PAL
Sbjct: 117 CFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPAL 176

Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
           A G T VLK +E   ++ L ++ +  E GLPPGVLN+V+G G  AGA LASH  VDK+AF
Sbjct: 177 AAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236

Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
           TGST TG+ ++  AA+  +KPV+LELGGKSP IV +D D+DKA E A +  F+  GQ C 
Sbjct: 237 TGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICS 295

Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           A SR  VHE +  +F+EK    A    + DP + G + GP V++
Sbjct: 296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSE 339

Length = 503

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  303 bits (778), Expect = e-100
 Identities = 139/296 (46%), Positives = 183/296 (61%), Gaps = 5/296 (1%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
            ++P TG VI  V    A DV+RAV+AA+ AF    W    A ER K++ R AD LE  +
Sbjct: 1   VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
           +E+A L   + G      A+ E  +   LFRY+ G A +++G T P        T+ EP+
Sbjct: 59  EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV G I+PWN PL++ A K+ PAL  GNT+VLK AE  PL+ L ++++L +  LP GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLN 177

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           +++GYG   GAAL  H +VDK+ FTGST  GKI+ + AA   L PV+LELGGKSP IV  
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFP 236

Query: 325 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
           DAD+D A + A   + F  QGQ C AGSR FVHE +YD F+EK  A   K  +GDP
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDP 292

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  301 bits (772), Expect = 1e-98
 Identities = 124/313 (39%), Positives = 169/313 (53%), Gaps = 11/313 (3%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
           ++P T +VI    +  A DV+ A++AAR+AFD G W    A ER++ + +  + LE   +
Sbjct: 2   INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60

Query: 146 EIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPAD--GPYHVQ 198
           E+ AL   + G P    ++ Q + P+     RY+A  AD       L  PA   GP    
Sbjct: 61  ELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLADSFPWEFDLPVPALRGGPGRRV 118

Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
              EP+GV   I PWNFP  +   K+ PALA GNT+VLK A  TPLSAL + +++ E  L
Sbjct: 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178

Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
           P GV+N+V+G     G AL +   VD ++FTGST  G+ ++  AA + LK V LELGGKS
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237

Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
             IV +DAD+  AA  A      N GQ C   +R  V  S YD+ VE   A      VGD
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297

Query: 379 PFKGGIQQGPQVN 391
           P   G   GP ++
Sbjct: 298 PADPGTVMGPLIS 310

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  297 bits (763), Expect = 1e-97
 Identities = 134/310 (43%), Positives = 172/310 (55%), Gaps = 14/310 (4%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
           ++P TG+V           +++AV+AA+ AF    W      ER   +L  AD +E + +
Sbjct: 2   INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQGLTAPADGPYHVQTLHEP 203
           E+A L T + GKP  + AQ EV       RY A     D++            V+   +P
Sbjct: 60  ELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVIEDDDTR----RVELRRKP 114

Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
           +GV   I+PWNFPLL+ AWK+ PAL  GNT+VLK +  TPL  L + +L  E  LPPGVL
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVL 173

Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
           N+VSG G   G AL SH ++ K++FTGST TGK V+  AAK  LK VTLELGG    IV 
Sbjct: 174 NVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVL 231

Query: 324 EDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
            D D+D  A  L   A F N GQ C A  R +VHES+YD+F E   ALA   VVGD    
Sbjct: 232 PDVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDP 290

Query: 383 GIQQGPQVNQ 392
           G   GP  N+
Sbjct: 291 GTTLGPVQNK 300

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  297 bits (762), Expect = 4e-97
 Identities = 142/331 (42%), Positives = 188/331 (56%), Gaps = 9/331 (2%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
             I+G+ V   S K     +P T  VI  VA     DV+ AV++A +AF    W + T  
Sbjct: 2   HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPA 60

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER +I+LR ADL+E+H +E+A LET  +GK    S   EV  +    RY+AGWA KI G 
Sbjct: 61  ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120

Query: 188 T------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           T      +     Y   T  EP+GV   I+PWNF +++  WK+G ALA G TIV+K +E 
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+ L V++L  EAG+P GVLN+V+G G   GA L SH +V K++FTGS  TGK + + 
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQ 239

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           AA S+L  VTLELGGK+     +DAD+D   E    A F +QGQ C A  R +VH S +D
Sbjct: 240 AA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + V K         VG P    +  GP  NQ
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQ 329

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  290 bits (745), Expect = 2e-94
 Identities = 139/326 (42%), Positives = 198/326 (60%), Gaps = 6/326 (1%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
            I G++VDSASG+TF + +P    +V+       A DV+ AV AAR+AF E  W ++ A 
Sbjct: 2   YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
            R++ + R A+LL++  +E+A L T + GKP  +  + +V     + +Y AG   ++ G 
Sbjct: 60  RRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRRLFGE 118

Query: 188 TAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
           T P++ P     T  +PIGV   I PWNFP+ + +WK+ PAL CGNT+V K AE TP  A
Sbjct: 119 TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           L + +L  EAGLPPGV+N+V G G   G AL  H +VD ++FTGST  G+ + +  A+ N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
            K V LE+GGK+P IV +DAD+D A E A ++ F   GQ C A SR  VHESVYD+F+++
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297

Query: 367 ANALAMKRVVGDPFKGGIQQGPQVNQ 392
               A +  VGD        GP +N+
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINE 323

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  290 bits (743), Expect = 6e-94
 Identities = 142/328 (43%), Positives = 200/328 (60%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           TQ LI G++ D+  GKTFP  +P TG+VI +V      + N A+++A  AF    W ++T
Sbjct: 25  TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ERSKI+ R+ DL+  + +++A L T + GKP  + A  EV        Y+A  A ++ 
Sbjct: 83  ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRVY 141

Query: 186 G-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G +         +  L +P+GV G I PWNFPL M   KVGPALA G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +AL  ++L  +AG+PPGVLN+V G  P  G AL +  +V K+ FTGST  GK ++  AA 
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           + +K V+LELGG +PFIV +DAD+D A + A  + F N GQ C   +R  V E +YD+F 
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E  +    K VVGD F+ G+ QGP +N+
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINE 348

Length = 498

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  269 bits (691), Expect = 1e-86
 Identities = 131/302 (43%), Positives = 173/302 (57%), Gaps = 11/302 (3%)

Query: 83  FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
              + P  G+VI  V     EDV +A++AA++   E     + AYER++I+ R A LLE 
Sbjct: 1   IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58

Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ---- 198
             +E A     + GKP +  A+ EV       R  A  A ++ G T P D     +    
Sbjct: 59  RREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117

Query: 199 -TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
            T+ EPIGV   I P+NFPL + A KVGPA+A GN +VLK A QTPLSAL +++LL EAG
Sbjct: 118 FTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177

Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
           LP G LN+V+G G T G AL +   V  ++FTGS   G+    +A K+ LK VTLELG  
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSN 234

Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
           +  IV  DAD++KA E      F N GQ C +  R FVHE +YD+F+E+  A   K VVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294

Query: 378 DP 379
           DP
Sbjct: 295 DP 296

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  269 bits (689), Expect = 2e-86
 Identities = 126/311 (40%), Positives = 178/311 (57%), Gaps = 5/311 (1%)

Query: 83  FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
           F  L+P  G V   VA G  +D  RA++AA  AF    W   T  ER +I+L+ A+++ER
Sbjct: 1   FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58

Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLH 201
             D++  L   + G  +   A  E   T  L R  AG   +++G T P+D P  V  ++ 
Sbjct: 59  RADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117

Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
            P+GV   I P+N+PL++   KV  ALA GNT+VLK +E+TP+  L +++++ EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177

Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           V N+V+G G   G  L     V  + FTGST  G+ + + A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236

Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V  DAD+D A   A +  F +QGQ C + SR  V E VYD+FV+K  A A K  VGDP  
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296

Query: 382 GGIQQGPQVNQ 392
                GP ++ 
Sbjct: 297 PDTVIGPLISP 307

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  270 bits (693), Expect = 3e-86
 Identities = 125/331 (37%), Positives = 175/331 (52%), Gaps = 11/331 (3%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+I G+ V +   +   + +P    +V+  V +   E+   AV AAR AF    W R   
Sbjct: 35  LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER++++LR A LL R   E+AA    + GK + + A  +V        YYA    +++G
Sbjct: 91  EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRG 149

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
                      + ++ P+GV   I PWNFPL + A     AL  GNT+VLK AE TP+ A
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
             + ++L EAGLPPGV+N + G G   G  L  H +V  +AFTGS   G  + + AAK  
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269

Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
                LK V  E+GGK+  IV EDAD+D+AAE    + F  QGQ C A SR  VHESVYD
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +F+E+         VGDP    +  GP +++
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDK 360

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  266 bits (683), Expect = 1e-85
 Identities = 121/291 (41%), Positives = 162/291 (55%), Gaps = 6/291 (2%)

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
           DV+RA +AA  A     W      ER+ I+ + A++LE   DEIA     ++G      A
Sbjct: 1   DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTR-PKA 57

Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
             EV     + R  AG   + +G   P+D P         P+GV G I P+NFPL++   
Sbjct: 58  AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMR 117

Query: 223 KVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
            V PALA GN +VLK   +TP++  L ++++  EAGLP GVLN+V G G   G AL  H 
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177

Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
            V  ++FTGST  G+ + +LA + +LK V LELGG +P IV +DAD+D A   A +  F 
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236

Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +QGQ C A  R  VHESVYD+FVEK  A A    VGDP       GP +N+
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINE 287

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  267 bits (685), Expect = 2e-85
 Identities = 129/328 (39%), Positives = 180/328 (54%), Gaps = 9/328 (2%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           ING FV   SGKTF  ++P  G VI  V E  A +V+ AV+AAR A  +GPW +MT  ER
Sbjct: 5   INGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAER 61

Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--- 186
           + ++   AD +ER  D+  A E  D GKP   ++  ++P     FR +A           
Sbjct: 62  ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121

Query: 187 -LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            +  P         + +P+GV G I PWN PLL+  WKVGPALACGNT+V+K +E+TP +
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           A  + ++++  G+P GV N+V G+GP +AG  L  H  VD + FTG T TG  +++ AA 
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             +KPV+ ELGGK+  IV  D D D A      + F N GQ C    R +V   ++D+FV
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
               A A    +G P       GP ++ 
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISA 328

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  266 bits (681), Expect = 3e-85
 Identities = 127/309 (41%), Positives = 178/309 (57%), Gaps = 6/309 (1%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
            ++P TG V+  V    A DV+RAV+AAR AF E  W   T  ER++++   A  L  H 
Sbjct: 1   VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
           +E+A ++  D G P   +   +V +   L  Y+AG   +++G T P  G     TL EP 
Sbjct: 59  EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           GV  +I+ +N PL+  A K+   LA GNT+V+K  EQ PLSAL +++L  E  LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           I+ G G TAGAAL  H +V ++A  GS  TG+ +++ AA+  +K VTLELGGK+  IV  
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235

Query: 325 DADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383
           DAD + AA+ A   + F   GQ C + SR FVHES+YD+ + +         VGDP    
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295

Query: 384 IQQGPQVNQ 392
              GP V++
Sbjct: 296 TTMGPLVSR 304

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  263 bits (675), Expect = 2e-84
 Identities = 128/304 (42%), Positives = 182/304 (59%), Gaps = 13/304 (4%)

Query: 83  FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
               +P  G+VI  V     E+V  A+  A KA D      + AY+R KI+++ A+L+ER
Sbjct: 1   IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58

Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYH----V 197
             +E+A L T + GKP +QS + EV  T RLF+  A  A  ++G T P D   Y+     
Sbjct: 59  RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117

Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
            T+ EPIGV G I P+NFP  +FA K+ PA+A GN++V+K +  TPL+A+ ++K+L EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177

Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELG 315
           LPPGV+N+V+GYG   G  + ++ +V+ ++FTGST  G   L +A+K     K V LELG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELG 234

Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
           G  P IV +DAD+++A  +A    F N GQ C A  R  V E VYD+F++       K  
Sbjct: 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLK 294

Query: 376 VGDP 379
           VGDP
Sbjct: 295 VGDP 298

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  257 bits (659), Expect = 1e-81
 Identities = 122/329 (37%), Positives = 175/329 (53%), Gaps = 11/329 (3%)

Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
           +I G++V S  G+TF + +P  G+ I  V     EDV  AV+AAR+AF E  W ++ A  
Sbjct: 2   VIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58

Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R +I+ +  + L +  + +  L + + GK        EV     +  Y  G +  + GLT
Sbjct: 59  RGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRMLYGLT 117

Query: 189 APADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
            P++ P H       P+GV G I  +NFP+ +  W    AL CGNT+V K +E TPL+A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177

Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            V+K+L E     GLPPGV+N+V+G G   G  L     V  ++FTGST  G+ V +  A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
           +     V LELGG +  IV +DAD+D A     +A     GQ C    R  VHESVYD+F
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295

Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +E+      +  +GDP   G   GP +NQ
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQ 324

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  255 bits (652), Expect = 5e-81
 Identities = 119/308 (38%), Positives = 186/308 (60%), Gaps = 6/308 (1%)

Query: 87  DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
           +P TG++I  V +   ++   A+ AA +AF    W   TA ERS ++ ++ +L+  + D+
Sbjct: 3   NPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENKDD 60

Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIG 205
           +A L T +NGKP ++ A+ E+        ++A  A ++ G T P+      +  + +P+G
Sbjct: 61  LARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119

Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
           V   I PWNFP  M   K G ALA G T+V+K AEQTPLSAL +++L  +AG+P GVLN+
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179

Query: 266 VSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
           ++G      G  L +   V K++FTGST  GKI+++ +A + +K V++ELGG +PFIV +
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFD 238

Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           DAD+D+A E A  + F N GQ C   +R +VH+ +YD+F +K      K  VG+    G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298

Query: 385 QQGPQVNQ 392
            QGP +N+
Sbjct: 299 TQGPLINE 306

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  246 bits (629), Expect = 2e-77
 Identities = 114/294 (38%), Positives = 164/294 (55%), Gaps = 7/294 (2%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           ++DP TG+VI   A+G   +   A++AAR+AFDE  W       R++++L  AD  E + 
Sbjct: 1   SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEP 203
           + +A L   +NGK   + A+ E+       RYYAG A    G    P  G + +  L EP
Sbjct: 60  ERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREP 117

Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-GLPPGV 262
           +GVAG I+PWN P+++    + PALA G T+V+K A QT      + ++L E   LP GV
Sbjct: 118 MGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV 177

Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
           +N+ +  G    A L +  +VD ++FTGST TG+  +  AA   LK + LELGGK+P IV
Sbjct: 178 VNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIV 236

Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRV 375
            +DAD+D A      AL    GQ C AGSR  V  S+ D+  ++ A  LA  +V
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKV 290

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  245 bits (627), Expect = 6e-77
 Identities = 129/327 (39%), Positives = 190/327 (58%), Gaps = 5/327 (1%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           Q LING+++D+ +G+     +P  GD +  V +  A++   A+ AA +A     W  +TA
Sbjct: 12  QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 69

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER+ I+ R+ +L+  H D++A L T + GKP  + A+ E+        ++A    +I G
Sbjct: 70  KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 128

Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            T P       +  + +PIGV   I PWNFP  M   K GPALA G T+VLK A QTP S
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L   AG+P GV N+V+G     G  L S+  V KL+FTGST  G+ +++  AK 
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           ++K V+LELGG +PFIV +DAD+DKA E A  + F N GQ C   +R +V + VYD+F E
Sbjct: 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 307

Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           K      K  +GD  + G+  GP +++
Sbjct: 308 KLQQAVSKLHIGDGLEKGVTIGPLIDE 334

Length = 482

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  245 bits (629), Expect = 1e-76
 Identities = 126/301 (41%), Positives = 164/301 (54%), Gaps = 21/301 (6%)

Query: 75  VDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
           VD A+G T     P TG+ +  V    A DV  A + AR A  +  W      ER+ ++L
Sbjct: 26  VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83

Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKIQGLTAPA 191
           RF DL+  + +E+  L   + GK   + A  E   V +T R   YYA  A K   L AP 
Sbjct: 84  RFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YYARRAPK---LLAPR 136

Query: 192 D--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
              G   V T    L +P GV G I PWN+PL +      PAL  GN +VLK   QTPL+
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL   +LL+EAGLP  +  +V+G GP  G AL  +   D L FTGST TG+++ + A   
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
            L   +LELGGK+P IV +DAD+DKAA  A  A F N GQ C +  R +VHES+YD+FV 
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313

Query: 366 K 366
            
Sbjct: 314 A 314

Length = 524

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  243 bits (623), Expect = 2e-76
 Identities = 120/307 (39%), Positives = 162/307 (52%), Gaps = 10/307 (3%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
            +P TG+V+  V   +  +V  AV+ AR A     W  +    R++ +LR+   L  H D
Sbjct: 1   RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPADGPYHVQTL-H 201
           E+A L   + GKP    A  EV +      + A  A ++   + +      P    T+ +
Sbjct: 59  ELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEY 117

Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
            P GV G I PWN+PLL     + PALA GN +VLK +E TPL    +++    AG P G
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177

Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           VL +V+G G T GAAL     VDK+AFTGS  TG+ V+  AA+  L PV LELGGK P I
Sbjct: 178 VLQVVTGDGAT-GAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234

Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V  DAD+++AA  A +    N GQ C +  R +VHESVYD+FV +  A A     G    
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294

Query: 382 GGIQQGP 388
           G    GP
Sbjct: 295 GDADIGP 301

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  239 bits (611), Expect = 1e-74
 Identities = 129/323 (39%), Positives = 180/323 (55%), Gaps = 6/323 (1%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           +LLING+ V    G+  P  +P TG+VI  +AE  AE V+ AV AA  AF E  W + T 
Sbjct: 3   KLLINGELVS-GEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
             R++ +L+ AD++E +    A LE+ + GKP       E+P    +FR++AG A  + G
Sbjct: 60  KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119

Query: 187 LTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           L A      H   +  +P+GV   I PWN+PL+M AWK+ PALA GN +VLK +E TPL+
Sbjct: 120 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 179

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L  +   P GV+NI+ G G T G  L  H +V  ++ TGS  TG+ +L   A S
Sbjct: 180 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS 238

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
            +K   +ELGGK+P IV +DAD+D   E      F+N GQ C A  R +    +YD  VE
Sbjct: 239 -IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVE 297

Query: 366 KANALAMKRVVGDPFKGGIQQGP 388
           K  A       G P     + GP
Sbjct: 298 KLGAAVATLKSGAPDDESTELGP 320

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  239 bits (611), Expect = 1e-74
 Identities = 121/330 (36%), Positives = 170/330 (51%), Gaps = 13/330 (3%)

Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
           LING++ +S SGKT     P  G+VI  V    A ++  A   A  A   G WP M   E
Sbjct: 5   LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPLEE 62

Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R   + +FADLL+ + +E+A L  W+ GK   + A  EV  T    R       ++ G +
Sbjct: 63  RIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKRLDGDS 121

Query: 189 APADGPYHVQTL-----HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
            P D     +        EP+GV   I P+N+PL +   K+ PAL  GNT+V K A Q  
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGV 181

Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
           L  + +++  H+AG P GV+N+V+G G   G  L +H  +D ++FTGST  G  + +   
Sbjct: 182 LLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP 241

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
               K + LELGGK P IV  DAD++ AA E+   AL ++ GQ C A  R  VHESV D+
Sbjct: 242 M---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADE 297

Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            VE       K  VG P+  G+   P ++ 
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDP 327

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  238 bits (609), Expect = 2e-74
 Identities = 127/325 (39%), Positives = 174/325 (53%), Gaps = 10/325 (3%)

Query: 72  GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131
           G++ D  S +T   L+P TG+ +  +     EDV+ A  AA  A  E  W      ER++
Sbjct: 1   GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58

Query: 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA 191
           I+ + A +LE   DEI      ++G    + A  E      + R  A +  +++G   P+
Sbjct: 59  ILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFPLRMEGRILPS 117

Query: 192 DGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-L 247
           D P     V    EP+GV G I PWNFPL +    V PALA GN +VLK A  TP++  L
Sbjct: 118 DVPGKENRV--YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175

Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            ++K+  EAGLP GVLN+V G G   G A   H     ++FTGST  G+ + +LA + +L
Sbjct: 176 LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HL 234

Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K V LELGG +PF+V EDAD+D A   A +  F +QGQ C A +R  VHE VYD+FVEK 
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294

Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
                    GDP       GP +N+
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINE 319

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  234 bits (600), Expect = 2e-73
 Identities = 116/292 (39%), Positives = 158/292 (54%), Gaps = 13/292 (4%)

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
           D ++AV AA  AF    W +    ER  I+L+ ADLLE   DE       + G      A
Sbjct: 1   DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57

Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
              V +   + R  A    +I G + P+D P  +   + EP+GV   I PWN P+++   
Sbjct: 58  GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117

Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 279
            +   LA GNT+VLK +E +P +   + ++ HEAGLP GVLN+V+      P    AL +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177

Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339
           H  V K+ FTGST  G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA  A +  
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236

Query: 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           F N GQ C +  R  VHES+ D+FVEK     +K      F G +  G  V+
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVS 283

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  231 bits (592), Expect = 5e-72
 Identities = 117/312 (37%), Positives = 167/312 (53%), Gaps = 14/312 (4%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
            +P TG+V+  V  G  E +  A++ A           +T Y+RS I+ + A LLE   +
Sbjct: 4   RNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARRE 58

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTL 200
           E A L T ++G    +  + EV     + R+ A  A +  G +   D         + TL
Sbjct: 59  EFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL 117

Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
            EP+GV   I P+N PL   A K+ PA+A  N IVLK +E+TPLSA+Y++ LL+EAGLPP
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPP 177

Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
            +L++V+G     G  L +H +VD + FTG    GK +   AA +  K   LELGG  P 
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPL 234

Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
           IV +DAD+++AA LA    + N GQ C A  R  VHESV D+FV+     +   VVGDP 
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294

Query: 381 KGGIQQGPQVNQ 392
                 G  +++
Sbjct: 295 DPATDMGTVIDE 306

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  233 bits (596), Expect = 6e-72
 Identities = 114/335 (34%), Positives = 168/335 (50%), Gaps = 19/335 (5%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+I G+ + +       +++P    +V+  V++   E   +A+ AA +AF+   W + + 
Sbjct: 39  LIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSP 94

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWAD 182
            +R++I+LR A ++ R   E +A    + GKP+ + A  +         YYA      AD
Sbjct: 95  EDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLAD 153

Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
                + P +   H +  + P+GV   I PWNFP  + A     A+  GNT++LK A  T
Sbjct: 154 GKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDT 210

Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           P+ A    ++L EAGLP GV+N V G G   G  L  H +   + FTGS   G  + + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270

Query: 303 AKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
           AK       LK V  E+GGK   +V EDAD+D AAE    + F   GQ C A SR  VHE
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330

Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            VYD+ +EK   L  +  VG+P       GP +NQ
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQ 364

Length = 514

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  230 bits (589), Expect = 4e-71
 Identities = 110/329 (33%), Positives = 170/329 (51%), Gaps = 8/329 (2%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +L ING++V+S + +     +P TG+VI  V    AE+V+ AV+AA+ AF    W    
Sbjct: 1   LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             +R +++ +F  LLE + DE+A L T ++GK     A+ +V     +  +       ++
Sbjct: 59  VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIPHLLK 117

Query: 186 GLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
           G      A G     +  +P+GV   I P+NFP ++  W    A+ACGNT VLK +E+ P
Sbjct: 118 GEYLENVARG-IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVP 176

Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            +A+ +++LL EAGLP GVLN+V G G  A  AL  H ++  ++F GST  G+ + + AA
Sbjct: 177 GAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
            +  K V    G K+  +V  DAD+++ A     A F   GQ C A S         D++
Sbjct: 236 ANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW 294

Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + K    A K  VG     G   GP ++ 
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISP 323

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  228 bits (584), Expect = 9e-71
 Identities = 113/288 (39%), Positives = 150/288 (52%), Gaps = 19/288 (6%)

Query: 87  DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
            P TG+ +  + +    DV  A + AR A     W      ER+ + LRF DL+    DE
Sbjct: 2   APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59

Query: 147 IAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT--- 199
           +  L   + GK     FE+     V +  R   YYA  A+++        G   V T   
Sbjct: 60  LLDLIQLETGKARRHAFEEVLD--VAIVAR---YYARRAERLLK-PRRRRGAIPVLTRTT 113

Query: 200 -LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
               P GV G I PWN+PL +      PAL  GN +VLK   QT L+AL+  +LL EAGL
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGL 173

Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
           P  +  +V+G G   G A+  +   D + FTGST TG++V + A    L   +LELGGK+
Sbjct: 174 PRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKN 230

Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           P IV EDAD+DKAA  A  A F N GQ C +  R +VHESVYD+FV +
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRR 278

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  227 bits (581), Expect = 2e-70
 Identities = 122/303 (40%), Positives = 160/303 (52%), Gaps = 6/303 (1%)

Query: 91  GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL 150
           G V+  V   +A DV+RA + A  A     W      ER+ ++ R ADLLE H DEIA  
Sbjct: 1   GAVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIADW 58

Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQI 210
              ++G      A  EV          AG   + QG   P+           P+GV G I
Sbjct: 59  IVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117

Query: 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGY 269
            P+NFPL++    V PALA GN +VLK   +TP+S   V ++L  EAGLP GVL+++ G 
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG- 176

Query: 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329
           G  AG AL     V  ++FTGST  G+ V + A + +LK V+LELGGK+  IV +DAD+D
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235

Query: 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389
            AA    +  F +QGQ C A  R  VHESV D +  K  A A    VGDP  G +  GP 
Sbjct: 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPL 295

Query: 390 VNQ 392
           +N 
Sbjct: 296 INA 298

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  226 bits (579), Expect = 4e-70
 Identities = 113/306 (36%), Positives = 147/306 (48%), Gaps = 6/306 (1%)

Query: 88  PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
           P  G VI        E V  A+  AR A     W  +   ER  I+ R  +LL  + DEI
Sbjct: 3   PIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEI 60

Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV 206
           A   TW  G+P  Q+   E+       RY    A++ +  +  P    +      EP+GV
Sbjct: 61  AEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV 119

Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
              I PWN+P L     V PAL  GN ++LK + QTPL     +    EAGLP GV  ++
Sbjct: 120 VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVL 179

Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
                T  AAL +   +D ++FTGS   G+ + Q AA      V LELGGK P  V  DA
Sbjct: 180 HLSHET-SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDA 237

Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
           D+D AAE      FFN GQ CC+  R +VHES+YD FVE   A+     +GDP       
Sbjct: 238 DLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTL 297

Query: 387 GPQVNQ 392
           GP V+ 
Sbjct: 298 GPVVSA 303

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  224 bits (573), Expect = 3e-69
 Identities = 108/293 (36%), Positives = 142/293 (48%), Gaps = 23/293 (7%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
           +  A+  A  AF    W + +  ER+ ++ + ADLL    DE+A L T + GKP  + A+
Sbjct: 1   IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE-AR 57

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
            EV     + RYYA   +  +   A      D        +EP+GV   I+PWNFP    
Sbjct: 58  AEVEKCAWICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF--- 110

Query: 221 AWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGA 275
            W+V     P L  GNT++LK A   P  AL + +L  EAG P GV  N++         
Sbjct: 111 -WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE-- 167

Query: 276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335
           A+ +   V  +  TGS   G+ V   A K NLK   LELGG  PFIV +DAD+DKA + A
Sbjct: 168 AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTA 226

Query: 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
                 N GQ C A  R  VHE VYD+F+EK         VGDP       GP
Sbjct: 227 VKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGP 279

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  223 bits (571), Expect = 5e-69
 Identities = 117/309 (37%), Positives = 165/309 (53%), Gaps = 11/309 (3%)

Query: 87  DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
           +P  G+VI  V   +  D   A++ AR   +      +  +ER  I+ R ADLL++  +E
Sbjct: 5   NPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRAEE 62

Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-----TLH 201
            A +   + GKP +  A+ EV       R  A  A++I+G   P D           T+ 
Sbjct: 63  FAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIR 121

Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
           EP+GV   I P+NFPL + A K+ PA+A G  +VLK A +TPLSAL ++K+L EAG+P G
Sbjct: 122 EPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEG 181

Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           VL +V+G     G A A+   V  L+FTGS   G+    L A +  K + LELGG +P I
Sbjct: 182 VLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVI 238

Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V  DAD+D A E      F++ GQ C +  R +VHE +YD+F+E   A   K  VGDP  
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298

Query: 382 GGIQQGPQV 390
                GP +
Sbjct: 299 EDTDVGPLI 307

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  220 bits (562), Expect = 5e-68
 Identities = 100/251 (39%), Positives = 143/251 (56%), Gaps = 6/251 (2%)

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 203
            EI+AL   + GK  +Q A+ EV  T     Y A WA + +G    +D P  ++      
Sbjct: 13  SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71

Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
           +GV   I+PWNFP  + A K+ PAL  GNTIV+K +E TP +A+  +K++ E GLP GV 
Sbjct: 72  LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131

Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
           N+V G G T G  LA + +V  ++ TGS + G+ ++  AAK N+  V LELGGK+P IV 
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190

Query: 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 382
           +DAD+D A +    +   N GQ C    R +V + +YDQFV +    AM+ V  G+P + 
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249

Query: 383 G-IQQGPQVNQ 392
             I  GP +N 
Sbjct: 250 NDIAMGPLINA 260

Length = 409

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  216 bits (553), Expect = 5e-66
 Identities = 130/335 (38%), Positives = 182/335 (54%), Gaps = 13/335 (3%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           ++LLI+G+ V  ++G TFPT++P T +V+   A+  A D++ A++AAR+AFDE  W R T
Sbjct: 1   SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADK 183
           A  R + + +  D L  H +E+  L   + G P      AQ E P+      + A  A+ 
Sbjct: 60  AL-RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAES 116

Query: 184 IQ-----GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
                  G+ +P   P       E +GV G I PWNFP  +   K+GPALA GNT+VLK 
Sbjct: 117 YAWTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKP 176

Query: 239 AEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
           A  TP  A  + +L+ E    PPGV+NIV+      GA LA    VD ++FTGST TG+ 
Sbjct: 177 APDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRA 236

Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
           V+  AA + LK V LELGGKS FIV +DAD+  A  +A + +  + GQ C   +R  V  
Sbjct: 237 VMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPR 295

Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + YD+ V  A A       GDP   G   GP ++ 
Sbjct: 296 ARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISA 330

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  200 bits (509), Expect = 3e-59
 Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 14/333 (4%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+ING+ V++ +     +++P    +V+  V++   E    A+ AA KAF+   W +   
Sbjct: 35  LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDP 90

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
            ER+ I+ + A ++ R   E +AL   + GKP+ + A  EV        YYA    ++  
Sbjct: 91  EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAK 149

Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
                  +G  + Q ++ P GV   I PWNFP  +        +  GN +VLK AE  P+
Sbjct: 150 GKPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
            A    ++L EAGLP GV+  V G G   G  L  H +   + FTGS   G  + + AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268

Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
                 +LK V  E+GGK   IV EDAD++ AA+ A  + F   GQ C AGSR  VHE V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           YD+ VE+   +     VG P    +  GP ++Q
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQ 361

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  197 bits (504), Expect = 6e-59
 Identities = 111/315 (35%), Positives = 152/315 (48%), Gaps = 14/315 (4%)

Query: 83  FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
               +P TG+V+  VA    +D+  A++AA KAF   P   + A+ R+ I+L     LE 
Sbjct: 1   LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58

Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-----YHV 197
             +E+A     + GKP +  A+ EV      FR  A  A +I G   P D          
Sbjct: 59  RFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117

Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
                PIG    I P+NFPL + A KV PA+A G   VLK A +TPLSAL + ++L E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177

Query: 258 LPPGVLNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316
           LP G  +++        A  L +   +  L+FTGS   G  +   A K   K V LELGG
Sbjct: 178 LPKGAFSVLP--CSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232

Query: 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
            +  IV  DAD+D AA+   +  F+  GQ C +  R  VH SVYD+F  +  A       
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292

Query: 377 GDPFKGGIQQGPQVN 391
           GDP       GP ++
Sbjct: 293 GDPKDDATDVGPMIS 307

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  193 bits (493), Expect = 4e-57
 Identities = 107/323 (33%), Positives = 160/323 (49%), Gaps = 16/323 (4%)

Query: 78  ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
             G    ++ P  G+ I  V +   ED    + AA++AF E  W  + A +R +I+ +  
Sbjct: 9   GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66

Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHV 197
           D L +  + +  L + + GK        EV     +  +  G + ++ GLT P++ P H 
Sbjct: 67  DALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125

Query: 198 QTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL-- 252
             + E   P+GV G I  +NFP+ ++ W    AL CGN +V K +  TPL+A+ V+K+  
Sbjct: 126 --MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVA 183

Query: 253 --LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
             L + GLP  + ++V G G   G AL     V  ++FTGST  G+ V Q  A       
Sbjct: 184 RVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRS 241

Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
            LELGG +  IV EDAD+D A     +A     GQ C    R  VHES+YD+ +E+    
Sbjct: 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK- 300

Query: 371 AMKRV-VGDPFKGGIQQGPQVNQ 392
           A K+V +GDP   G   GP   +
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTK 323

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  192 bits (489), Expect = 1e-56
 Identities = 99/319 (31%), Positives = 146/319 (45%), Gaps = 32/319 (10%)

Query: 87  DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
           DP TG  +  V     EDV+ A++AAR A  E  W + +  ER K++      +  + +E
Sbjct: 2   DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59

Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-------PADGPYHVQT 199
           I  +   D GK    ++  E+ + T          +KI+           P   P  +  
Sbjct: 60  ICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLLM 109

Query: 200 LH-------EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY---- 248
            +       EP+GV G I+ WN+P       +  AL  GN IV+K +EQ   S+ +    
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169

Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
           + + L   G  P ++ +V+    T   AL SH  +D + F GS   GK V+  AA+S L 
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227

Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
           PV LELGGK P IV +DAD+D+ A +     F + GQ C    R  VHE +YD+ +E   
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287

Query: 369 ALAMKRVVGDPFKGGIQQG 387
                   G P  G +  G
Sbjct: 288 DRVQALRQGPPLDGDVDVG 306

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  187 bits (477), Expect = 7e-55
 Identities = 115/319 (36%), Positives = 162/319 (50%), Gaps = 17/319 (5%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           L I G+ V     +      P  G V+  V +   +DV RA + A  A+     P +T Y
Sbjct: 6   LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRY 58

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ERS I+ R A LL    +EI+ L T ++G   ++ +  EV     +  + A  A +  G 
Sbjct: 59  ERSAILDRAAALLAARKEEISDLITLESGLS-KKDSLYEVGRVADVLTFAAAEALRDDGQ 117

Query: 188 T-----APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
                  P      V T  EP+ GV   I P+N P+   A K+ PA+A  N +V+K +E+
Sbjct: 118 IFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEK 177

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPLSALY++ +L+EAGLPP +L +V+G        L ++  VD + FTG    GK +   
Sbjct: 178 TPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--- 234

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           AA++  +   LELGG  P IV EDAD+D+AA+LA    + N GQ C A  R  V ESV D
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVAD 294

Query: 362 QFVEKANALAMKRVVGDPF 380
           +F E           GDP 
Sbjct: 295 RFTELLVEKTRAWRYGDPM 313

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  183 bits (466), Expect = 1e-53
 Identities = 108/297 (36%), Positives = 155/297 (52%), Gaps = 19/297 (6%)

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
            V+ AV+AAR AF    W  ++  ER+ I+ RFA+LL+ + +E+A L + + GKP  + A
Sbjct: 1   QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWE-A 57

Query: 164 QTEVP-------MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
           QTEV        ++ + +    G     +  T  A G   ++  H P GV     P+NFP
Sbjct: 58  QTEVAAMAGKIDISIKAYHERTG-----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFP 110

Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
             +    + PAL  GNT+V K +E TP  A  + +L  EAGLPPGVLN+V G G   G A
Sbjct: 111 GHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEA 169

Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
           LA+H  +D L FTGS  TG ++ +  A    K + LE+GG +P +V + AD+D AA L  
Sbjct: 170 LAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIV 229

Query: 337 YALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            + F   GQ C    R  V +  V D F+E+    A +  +G P       GP +  
Sbjct: 230 QSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIA 286

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  184 bits (470), Expect = 2e-53
 Identities = 116/327 (35%), Positives = 168/327 (51%), Gaps = 15/327 (4%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           +ING+  ++  G   P +DP      I  V+  +AEDV+ A++ A  AF    W      
Sbjct: 36  IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER++I+ + ADLLE +  E+ AL   + GK     A  EV       RYYA  A ++   
Sbjct: 92  ERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARELFSD 150

Query: 188 TAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
                    +  L     GV   I PWNFPL +F  ++  ALA GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKS 305
               +LLHEAG+P  VL +V G G   G AL +H  +D + FTGST T K++ + LA + 
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270

Query: 306 N-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
             + P+  E GGK+  IV   A  ++A  ++   A F + GQ C A    ++ E + ++F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329

Query: 364 VE--KANALAMKRVVGDPFKGGIQQGP 388
           +E  K    ++K  VGDP+      GP
Sbjct: 330 IEMLKGAMASLK--VGDPWDLSTDVGP 354

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  176 bits (449), Expect = 1e-50
 Identities = 118/331 (35%), Positives = 166/331 (50%), Gaps = 40/331 (12%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           L ING ++    G+ F + +P +G+V+    +  A  V+ AV AAR AF    W R++  
Sbjct: 3   LWINGDWIA-GQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59

Query: 128 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
           ER  I+ RFA LLE + +E+A   A ET   GKP  ++A TEV              +KI
Sbjct: 60  ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV----------TAMINKI 105

Query: 185 QGLTAPADGPYHVQT--------------LHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
             ++  A   YH +T               H P GV     P+NFP  +    + PAL  
Sbjct: 106 -AISIQA---YHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161

Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
           GNT+V K +E TP  A    KL  +AGLP GVLN+V G G   G ALA+H ++D L FTG
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTG 220

Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
           S  TG ++ +  A    K + LE+GG +P ++ E AD+D A  L   + F + GQ C   
Sbjct: 221 SANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA 280

Query: 351 SRTFVHESVY-DQFVEKANALAMKRVVGDPF 380
            R  V +    D F+ +  A+A +  VG   
Sbjct: 281 RRLLVPQGAQGDAFLARLVAVAKRLTVGRWD 311

Length = 487

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  176 bits (447), Expect = 2e-50
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 13/332 (3%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+I G++VD+       ++ P    +V+   A+ +  +   A+ AA  AF    W     
Sbjct: 21  LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQ 76

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R++++L+ ADLL R   E+ A  T++ GK + + A  +V       RYYA  A +++ 
Sbjct: 77  EDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRY 135

Query: 187 --LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
             +          ++ +  +G    I PWNFP+ +F   +   +A GNT++ K AE   +
Sbjct: 136 PAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
               V ++ HEAG PPGV+  + G G   GA L  H  +  + FTGS  TGK + + AA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255

Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
                +  K + +E GGK+  IV E AD +   E    + F  QGQ C A SR  + +  
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           Y+  +E+    A +  VG P + G   GP ++
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVID 347

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  174 bits (443), Expect = 4e-50
 Identities = 113/314 (35%), Positives = 151/314 (48%), Gaps = 22/314 (7%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           T++P TG+ +        ++V+ A++ A   F +  +   T  +R++     ADLLE   
Sbjct: 5   TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PAD----GPYHVQ 198
           D++AAL T + GK    SA+ E     + FRYYA   +  + L A  PAD    G     
Sbjct: 63  DQVAALMTLEMGKTL-ASAKAEALKCAKGFRYYA---EHAEALLADEPADAAAVGASRAY 118

Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLH 254
             ++P+GV   ++PWNFPL    W+V     PAL  GN  +LK A   P +ALY++ L  
Sbjct: 119 VRYQPLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174

Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
            AG P G    +   G  A  A+     V     TGS   G+ V  +A    +K   LEL
Sbjct: 175 RAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLEL 232

Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
           GG  PFIV   AD+D+AAE A  A   N GQ C A  R  VH  VYD F EK  A     
Sbjct: 233 GGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292

Query: 375 VVGDPFKGGIQQGP 388
            VGDP       GP
Sbjct: 293 RVGDPTDPDTDVGP 306

Length = 457

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  168 bits (428), Expect = 5e-48
 Identities = 95/280 (33%), Positives = 137/280 (48%), Gaps = 29/280 (10%)

Query: 108 AVSAARKAFDEG-----PWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
            V+  R+ F  G      W       R   +     +L  + +EI AAL   D GKP  +
Sbjct: 3   LVARLRETFLTGKTRSLEW-------RKAQLKALKRMLTENEEEIAAALYA-DLGKPPAE 54

Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
           +  TE+ +      +       W    +        P     + EP+GV   I PWN+PL
Sbjct: 55  AYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114

Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
            L  A  +G A+A GNT+VLK +E  P ++  ++KL+ +    P  + +V G    A A 
Sbjct: 115 QLALAPLIG-AIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATAL 172

Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
           LA     D + FTGS   GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA    
Sbjct: 173 LAEPF--DHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIA 229

Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
           +  F N GQ C A     VHES+ D+ +E      +K+ +
Sbjct: 230 WGKFLNAGQTCIAPDYVLVHESIKDELIE-----ELKKAI 264

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score =  167 bits (426), Expect = 2e-47
 Identities = 111/325 (34%), Positives = 163/325 (50%), Gaps = 14/325 (4%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           L I+G++     G++F + +P T +V+   A   A  V  AV+AAR AF    W R++  
Sbjct: 1   LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLE 57

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRLFRYYAGWADKIQG 186
           ER  ++ RFA LLE   + +A +   + GKP  ++  TEV  M  ++      + ++  G
Sbjct: 58  ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHER-TG 115

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
            +            H P GV     P+NFP  +    + PAL  GNT+V K +E TP  A
Sbjct: 116 ESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVA 175

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
               KL  +AGLP GVLN+V G     G ALA+H ++D L FTGS+ TG ++ +  A   
Sbjct: 176 EETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRP 234

Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
            K + LE+GG +P IV E AD+D A  L   + F + GQ C    R  V +    D F+ 
Sbjct: 235 EKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLA 294

Query: 366 KANALAMKRVVGD------PFKGGI 384
           +   +A +  VG       PF G +
Sbjct: 295 RLVEVAERLTVGAWDAEPQPFMGAV 319

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  166 bits (422), Expect = 5e-47
 Identities = 107/326 (32%), Positives = 165/326 (50%), Gaps = 7/326 (2%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
              I G+F + ASG   P  +P T +V T VA    ++V+ AV++AR+ F    W + + 
Sbjct: 2   NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R+ ++LR+  LL+ H DEIA L T ++GK     A  +V     +  +  G    ++G
Sbjct: 60  AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKG 118

Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            T+        V ++ +P+GV   I P+NFP ++  W    A+ACGNT VLK +E+ P +
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           A+ +++L  EAG P GVLN+V G    A   L  H +V  ++F GST  G+ +    +  
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             K V    G K+  +V  DAD D AA+    A +   GQ C A S   V     D++V 
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295

Query: 366 KANALAMKRVVGDPFKGGIQQGPQVN 391
           +    A K  +G     G + GP + 
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLIT 321

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score =  162 bits (411), Expect = 3e-45
 Identities = 102/326 (31%), Positives = 146/326 (44%), Gaps = 19/326 (5%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           +I   +      +  P  +P    D++  V       V  A+ +A++AF    W    A 
Sbjct: 41  IIGHSYKADGEAQ--PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPT--WNATPAK 96

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER+  + R ADLLE H  E+ AL   + GK    +A  EV       RYYA     + G 
Sbjct: 97  ERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVLG- 154

Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
                     +   E  GV   I PWNFPL +F  ++  ALA GNT++ K AEQT L A 
Sbjct: 155 ----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAY 204

Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
              +L+ EAG P G + ++ G G   GAAL S   +  +AFTGST   +++ Q  A+   
Sbjct: 205 RAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED 264

Query: 308 KPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
            PV L  E GG++  IV   A  ++       + F + GQ C A     V E V D+ + 
Sbjct: 265 APVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLT 324

Query: 366 KANALAMKRVVGDPFKGGIQQGPQVN 391
                  +  VG P       GP ++
Sbjct: 325 MIQGAMQELKVGVPHLLTTDVGPVID 350

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score =  166 bits (421), Expect = 3e-45
 Identities = 109/315 (34%), Positives = 155/315 (49%), Gaps = 21/315 (6%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           ++NG  V  A G+  P ++P    D++  V E    DV +A+ AA  A     W      
Sbjct: 117 IVNGAPV--AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
           ER+ I+ R ADL+E    ++  L   + GK    +A  EV       RYYAG A D    
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231

Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
           LT            H P+G    I PWNFPL +F  ++  ALA GN+++ K AEQTPL A
Sbjct: 232 LT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
               +LLHEAG+PPGVL ++ G G T GAAL +   V  + FTGST   +++ +  AK  
Sbjct: 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339

Query: 307 LKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
            +P+ L  E GG++  IV   A  ++       + F + GQ C A     + E V D+ +
Sbjct: 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRIL 399

Query: 365 EKANALAMKRVVGDP 379
                   +  VG+P
Sbjct: 400 TMLKGAMAELRVGNP 414

Length = 769

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  166 bits (423), Expect = 3e-45
 Identities = 126/323 (39%), Positives = 167/323 (51%), Gaps = 34/323 (10%)

Query: 75  VDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
           + +  G+  P + P     V+  VA  +AE V +A++AAR AF    W R    ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613

Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTA 189
            R ADLLE +  E+ AL   + GK   Q A  EV       RYYA  A ++ G    L  
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRLFGAPEKLPG 672

Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
           P  G  +   LH   GV   I PWNFPL +F  +V  ALA GNT++ K AEQTPL A   
Sbjct: 673 P-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA 730

Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKSNLK 308
            KLLHEAG+P  VL ++ G G T GAAL +   +  +AFTGST T +I+ + LAA+    
Sbjct: 731 VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-P 789

Query: 309 PVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
            V L  E GG++  IV  D+         DV  +A       F + GQ C A    FV E
Sbjct: 790 IVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSALRVLFVQE 840

Query: 358 SVYDQFVEK-ANALAMKRVVGDP 379
            + D+ +E    A+A +  VGDP
Sbjct: 841 DIADRVIEMLKGAMA-ELKVGDP 862

Length = 1038

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  163 bits (416), Expect = 3e-44
 Identities = 98/250 (39%), Positives = 130/250 (52%), Gaps = 17/250 (6%)

Query: 76  DSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
               G T P L+P    DV+  V E  AEDV RA++AA+ AF E  W    A ER+ I+ 
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619

Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
           R ADL+E H  E+ AL   + GK    +A  EV       RYYA      Q         
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAA-----QARRLLNGPG 673

Query: 195 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254
                 H+P+G    I PWNFPL +F  ++  AL  GNT++ K AEQTPL A    +LLH
Sbjct: 674 ------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH 727

Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-- 312
           EAG+P   L ++ G G T GAAL +   +  + FTGST   +++ +  AK +  PV L  
Sbjct: 728 EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787

Query: 313 ELGGKSPFIV 322
           E GG++  IV
Sbjct: 788 ETGGQNAMIV 797

Length = 1208

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  155 bits (394), Expect = 9e-43
 Identities = 106/342 (30%), Positives = 163/342 (47%), Gaps = 25/342 (7%)

Query: 51  AAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVS 110
            A        +  D  +   +G++  S+SGK+    +P T      V     E+VN+A+ 
Sbjct: 1   MAGTGFFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAME 60

Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
           +A+ A  +  W +   ++R++++ + A +L+ H   IA     +  KP  + A TEV  +
Sbjct: 61  SAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRS 117

Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQ-------------TLHEPIGVAGQIIPWNFPL 217
             L  Y A      +G+    +G + V              T   P+GV   I P+N+P+
Sbjct: 118 GDLISYTAE-----EGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172

Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 277
            +   K+ PAL  GN +VLK   Q  ++AL++    H AG P G+++ V+G G   G  L
Sbjct: 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 232

Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
             H  V+ ++FTG  T     + ++ K+ + P+ +ELGGK   IV EDAD+D AA     
Sbjct: 233 TMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIK 288

Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
             F   GQ C A     V ESV D  VEK NA   K  VG P
Sbjct: 289 GGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330

Length = 496

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  151 bits (383), Expect = 2e-41
 Identities = 92/271 (33%), Positives = 134/271 (49%), Gaps = 19/271 (7%)

Query: 113 RKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA-ALETWDNGKPFEQSAQTEVPMTT 171
           + AF   P P  +  ER   + R   LL  + D +A A+      +   ++   E+  + 
Sbjct: 8   KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65

Query: 172 RLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP- 226
              ++       W    +        P   +  ++P+GV G I+PWN+PL +    +GP 
Sbjct: 66  AGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPL 122

Query: 227 --ALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
             ALA GN +++K +E TP  SAL +++LL E       + +V+G G    AA  S +  
Sbjct: 123 IAALAAGNRVMIKPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPF 178

Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
           D L FTGST  G+ V++ AA+ NL PVTLELGGKSP I+  DAD+ KAAE   +    N 
Sbjct: 179 DHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA 237

Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
           GQ C A     V E   ++FV  A A   K 
Sbjct: 238 GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKM 268

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  149 bits (379), Expect = 5e-41
 Identities = 77/191 (40%), Positives = 110/191 (57%), Gaps = 15/191 (7%)

Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
            EP+GV   I PWN+P+L+    + P   A+A G T+VLK +E TP +A  +++L+ +  
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161

Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
           L P    +V G  P   A L      DK+ +TGS   G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218

Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
           SP IV ++AD++ AA+   +  F N GQ C A     V  SVYD+FVE      +K+V+ 
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273

Query: 378 DPFKGGIQQGP 388
           + + GG    P
Sbjct: 274 EFYPGGANASP 284

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  145 bits (369), Expect = 2e-39
 Identities = 71/166 (42%), Positives = 96/166 (57%), Gaps = 6/166 (3%)

Query: 202 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
           EP GV   I PWN+P  L  A  +G A+A GNT VLK +E TP ++  ++K++ E     
Sbjct: 99  EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156

Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
             + +V G        L      D + FTGS   GKIV++ AAK +L PVTLELGGKSP 
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213

Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           IV EDA++  AA+   +  F N GQ C A     VHESV ++F+++
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKE 259

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  144 bits (366), Expect = 4e-39
 Identities = 98/280 (35%), Positives = 137/280 (48%), Gaps = 25/280 (8%)

Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
           +A + A +A         TA ER   + R    +    +EI A    D  KP  +   TE
Sbjct: 8   QAHALALRAS--------TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTE 59

Query: 167 V-PMTTRL---FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
           + P+ + +    ++   W  K + +  P        +  +EP GV   I PWN+P   F 
Sbjct: 60  ILPVLSEINHAIKHLKKWM-KPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYP---FN 115

Query: 222 WKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 278
              GP   A+A GNT +LK +E TP ++  ++K++ EA      + +  G    A A L 
Sbjct: 116 LAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE 174

Query: 279 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338
             +  D + FTGS   GKIV+  AAK +L  VTLELGGKSP IV E AD+ KAA+   + 
Sbjct: 175 --LPFDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231

Query: 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
            F N GQ C A    FVHESV D FVE   A  +++  G 
Sbjct: 232 KFLNAGQTCIAPDYVFVHESVKDAFVEHLKA-EIEKFYGK 270

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  139 bits (352), Expect = 9e-37
 Identities = 92/319 (28%), Positives = 144/319 (45%), Gaps = 16/319 (5%)

Query: 78  ASGKTFPTLDPRTGDVITHVAEGEAEDVN---RAVSAARKAFDEGPWPRMTAYERSKIIL 134
           A+G    +++P     I  V E   ED     RA   A K      W ++ A +R +I+ 
Sbjct: 31  ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKI-----WMQVPAPKRGEIVR 85

Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
           +  D L    D +  L + + GK   +    EV     +  +  G + ++ G   P++ P
Sbjct: 86  QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144

Query: 195 YHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL- 252
            H+   +  P+G+ G I  +NFP  +  W    AL CGN +V K A  TPL  + ++KL 
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204

Query: 253 ---LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
              L +  LP  +     G G   G A+A    +  ++FTGS+  G +V Q    +    
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV-QQTVNARFGK 262

Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
             LEL G +  IV +DAD+  A     +A     GQ C    R  +HES+YD  +E+   
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322

Query: 370 LAMKRVVGDPFKGGIQQGP 388
           +  +  +GDP + G   GP
Sbjct: 323 VYKQVKIGDPLEKGTLLGP 341

Length = 508

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  135 bits (342), Expect = 1e-35
 Identities = 104/331 (31%), Positives = 141/331 (42%), Gaps = 50/331 (15%)

Query: 86  LDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144
           ++P     I  V   +   +++A+  A   F D   W  + A+ER  I+ R ADL+E   
Sbjct: 4   VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61

Query: 145 DEIAALETWDNGKPF---------------------EQSAQTEVPMTTRLFRYYAGWADK 183
           DE+A L   + GKP                       Q    E+PM              
Sbjct: 62  DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPM-------------- 107

Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
             GLT  + G     T  EPIGV   I  +N PL +   +V PA+A G  +++K A  TP
Sbjct: 108 --GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATP 164

Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
           LS L    LLHEAGLP G    V      A   L +   V   +F GS   G ++     
Sbjct: 165 LSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIGSARVGWML----- 218

Query: 304 KSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           +S L P T   LE GG +P IV   AD+D          F++ GQ C +  R FV   + 
Sbjct: 219 RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA 278

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           D F ++  A A K VVGDP     + GP + 
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIR 309

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score =  133 bits (335), Expect = 3e-34
 Identities = 110/364 (30%), Positives = 177/364 (48%), Gaps = 14/364 (3%)

Query: 11  SRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLI 70
           S S T+++ T+  R   ++L R       +   S  S++   +  P  PP   +    LI
Sbjct: 64  SSSTTTTTTTMLLRISGNNL-RPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPN----LI 118

Query: 71  NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
            G FV+S S      ++P T +V++ V     E+   AVSAA++AF    W       R 
Sbjct: 119 GGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITTRQ 176

Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
           +++L+F +L+ ++ D++A   T + GK  + S   ++     +  +  G A    G   P
Sbjct: 177 RVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLP 235

Query: 191 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
                    ++ EP+GV   I P+NFP ++  W    A+ CGNT +LK +E+ P +++ +
Sbjct: 236 NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVIL 295

Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
           ++L  EAGLP GVLNIV G   T   A+    ++  ++F GS T G  +   AA    K 
Sbjct: 296 AELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KR 353

Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEK 366
           +   +G K+  +V  DA++D        A F   GQ C A S   FV +  S  D+ VE+
Sbjct: 354 IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVER 413

Query: 367 ANAL 370
           A AL
Sbjct: 414 AKAL 417

Length = 604

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  130 bits (329), Expect = 1e-33
 Identities = 85/258 (32%), Positives = 128/258 (49%), Gaps = 11/258 (4%)

Query: 129 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTT----RLFRYYAGWADK 183
           R + +     +LE +  E   A+   D G+   ++  TEV +T      L ++   +   
Sbjct: 31  RKQQLRNLLRMLEENKQEFSEAVHK-DLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKP 89

Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
            +  T    GP     + EP+GV   I  WN+PL +    +  A+A GNT+VLK +E +P
Sbjct: 90  EKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSP 149

Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            ++  ++KLL +  L P  + ++ G        L      D + FTGS   GK+V+Q AA
Sbjct: 150 HTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAA 206

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
           + NL P TLELGGKSP IV +  ++  AA    +  F N GQ C A     VH S+ D+F
Sbjct: 207 E-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF 265

Query: 364 VEKANALAMKRVVGDPFK 381
           +E A   A+K   G+  K
Sbjct: 266 IE-ALKEAIKEFFGEDPK 282

Length = 493

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  129 bits (326), Expect = 2e-32
 Identities = 88/244 (36%), Positives = 121/244 (49%), Gaps = 27/244 (11%)

Query: 87  DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145
           DPR  D++ +V E    +V +A+ +A  A    P W      ER+ I+ R ADL+E    
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722

Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGLTAPADGPYHVQTLHEPI 204
            +  L   + GK F  +A  EV       RYYAG   D     T            H P+
Sbjct: 723 TLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDNDT------------HRPL 769

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
           G    I PWNFPL +F  +V  ALA GN+++ K AEQTPL A    ++L EAG+P GV+ 
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829

Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKS 318
           ++ G G T GAAL +   V  + FTGST   ++ LQ      L  +    P+  E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQN 888

Query: 319 PFIV 322
             IV
Sbjct: 889 AMIV 892

Length = 1318

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 7e-30
 Identities = 90/313 (28%), Positives = 136/313 (43%), Gaps = 23/313 (7%)

Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           +++P TG+ ++ +    A+D+  A+  A   F +  W       R++ +      L   +
Sbjct: 11  SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68

Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT----- 199
           +E+A + T + GKP  Q A+ EV  +  L  +YA       G       P  V+      
Sbjct: 69  EEMAQMITREMGKPINQ-ARAEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122

Query: 200 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
            + P+G    I+PWNFPL        P L  GN  +LK A      A  ++++  +AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182

Query: 260 PGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315
            GV   ++     A     S M  D     +  TGS   G  +   A  + LK   LELG
Sbjct: 183 QGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELG 236

Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
           G  PFIV  DAD++ A + A    + N GQ C A  R  + E +   F E+  A A    
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALK 296

Query: 376 VGDPFKGGIQQGP 388
           +GDP       GP
Sbjct: 297 MGDPRDEENALGP 309

Length = 462

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score =  119 bits (299), Expect = 2e-29
 Identities = 98/320 (30%), Positives = 144/320 (45%), Gaps = 12/320 (3%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+I G+ V + SG+    + P     V+        E  N+AV AA  A  E  W  +  
Sbjct: 34  LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90

Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           Y+R+ I L+ ADLL   +  EI A       K   Q+    V      FR+ A +A ++ 
Sbjct: 91  YDRAAIFLKAADLLSGPYRAEILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARELY 150

Query: 186 GLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
                +      +T + P+ G    I P+NF  +       PAL  GNT++ K ++   L
Sbjct: 151 EQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAML 209

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVL 299
           S   V ++L EAGLPPGV+N V G GP     + +  ++  + FTGST T      ++  
Sbjct: 210 SNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQ 269

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
            L    N   +  E GGK   +V   ADV+          F  QGQ C A SR +V  S+
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329

Query: 360 YDQFVEKANALAMKRVVGDP 379
           + +F  +  A   +  VGDP
Sbjct: 330 WPRFKGRLLAELSRVKVGDP 349

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  117 bits (296), Expect = 3e-29
 Identities = 96/275 (34%), Positives = 131/275 (47%), Gaps = 32/275 (11%)

Query: 108 AVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQT 165
           AV  AR+AF  G   +    E R + +     +LE + DEI  AL   D  KP  ++  +
Sbjct: 3   AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-------HEPIGVAGQIIPWNFPL- 217
           E+ +     +Y       +     P     ++ TL        EP+GV   I  WN+PL 
Sbjct: 59  EILLVKNEIKYAI---SNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQ 115

Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN-----IVSGYGPT 272
           L     VG A+A GN +V+K +E +P +A    KLL E  L P  L+     +V G G  
Sbjct: 116 LTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LIPKYLDKECYPVVLG-GVE 167

Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
               L      D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP  V +  D+D AA
Sbjct: 168 ETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAA 225

Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
               +  F N GQ C A         V ++FVE  
Sbjct: 226 RRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEAL 260

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  117 bits (295), Expect = 7e-29
 Identities = 94/319 (29%), Positives = 135/319 (42%), Gaps = 59/319 (18%)

Query: 93  VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE-RHNDEIAALE 151
           V+      +A  V +A+ AA +A  E  W RM   +R+ I L+ ADLL  ++  E+ A  
Sbjct: 59  VLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNAAT 116

Query: 152 TWDNGK-PFEQSAQTEVPMTTRL---FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA 207
               GK  +    Q E+     L    R+   +A+++          Y  Q L  P GV 
Sbjct: 117 MLGQGKNVW----QAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVW 162

Query: 208 GQ------------IIPWNF----------PLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            +            + P+NF          P LM           GN ++ K ++   LS
Sbjct: 163 NRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-----------GNVVLWKPSDTAVLS 211

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVLQ 300
              V K+L EAGLPPGV+N V G GP  G  + +   +  L FTGST T      +I   
Sbjct: 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGEN 271

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           L        +  E GGK+  +V   ADVD          F  QGQ C A SR +V ES++
Sbjct: 272 LDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW 331

Query: 361 DQFVEKANALAMKRVVGDP 379
            +  E+      +  +GDP
Sbjct: 332 PEVKERLLEELKEIKMGDP 350

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  114 bits (287), Expect = 3e-28
 Identities = 86/258 (33%), Positives = 121/258 (46%), Gaps = 27/258 (10%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILR-FADLLERHNDEI-AALETWDNGKPFEQS 162
             R V   R+ F  G   R  + E  K  L+    L++ + D+I AAL   D GKP  +S
Sbjct: 1   APRLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAES 56

Query: 163 AQTEVPMTTR--------LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 214
            + EV +           L ++ A    K    T PA      + + EP+GV   I  WN
Sbjct: 57  FRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWN 112

Query: 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAG 274
           FP L+    V  A+A GN +VLK +E  P ++  ++KL+    L    + ++ G G    
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPET 170

Query: 275 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE- 333
            AL    + DK+ FTGS   G+I++  AAK +L PVTLELGGK P IV    D+  A   
Sbjct: 171 TALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRR 228

Query: 334 --LAHYALFFNQGQCCCA 349
                +    N GQ C A
Sbjct: 229 IAGGKWGC--NNGQACIA 244

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score =  113 bits (283), Expect = 1e-27
 Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 12/287 (4%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
             RA+ AA          R+   +R+  + R    L   + +IAA      GK +  +  
Sbjct: 1   PERALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN 58

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFA 221
                     R +  ++ +I        G    Q  H    P G    I  +NFPL +  
Sbjct: 59  ICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPL 118

Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 280
            ++  ALA GN +++K      +    + +LLH AG LPP  + +++G G T   AL  H
Sbjct: 119 LQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLH 177

Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYAL 339
                + FTGS+   +   +LA  +    + LEL G +  ++  DA  VD  A      +
Sbjct: 178 PNPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234

Query: 340 FFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQ 385
               GQ C A S  FV E+      VEK  AL  +R + D   G +Q
Sbjct: 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ 281

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 96.7 bits (240), Expect = 7e-22
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEIAALETWDNGKPFE 160
           A D +  V+  R++FD+G       YE R   + +   + + H  EI A    D GKP  
Sbjct: 9   AADASILVTELRRSFDDGV---TRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65

Query: 161 QSAQTEVPM---TTRL-FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
           +S+  EV +   + +L  +    W    +  T+    P   + + EP+GV   I  WN+P
Sbjct: 66  ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYP 125

Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
            L+    V  A++ GN +VLK +E  P S+  ++KLL E  L    + +V G      A 
Sbjct: 126 FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTAL 184

Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
           L    + DK+ +TGS+  G++++  AAK +L PV LELGGKSP +V  D D+
Sbjct: 185 L--EQKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDL 233

Length = 484

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 90.6 bits (225), Expect = 9e-20
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 98  AEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI--ILRFADLLERHNDEIAALETWDN 155
            E   E +  +V+  R+ ++ G   R   + +S++  +LR   L +       AL   D 
Sbjct: 1   EEAPGETLEGSVAELRETYESGR-TRSLEWRKSQLKGLLRL--LKDNEEAIFKALHQ-DL 56

Query: 156 GKPFEQSAQTEVPMTTRLFRY----YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
           GK   ++ + EV + T+           W    +        P   + + EP+GV     
Sbjct: 57  GKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFS 116

Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 271
            WNFP+ +    +  A+A GN +VLK +E  P ++ +++  +    L    + ++ G GP
Sbjct: 117 SWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVKVIEG-GP 174

Query: 272 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
             G  L  H + DK+ FTGS   G+I++  AAK +L PV LELGGK P IV
Sbjct: 175 AVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIV 223

Length = 484

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 4e-17
 Identities = 90/350 (25%), Positives = 141/350 (40%), Gaps = 46/350 (13%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY-E 128
           + G++    SG   P  DP TG+ +  V      D+  A + AR+    G   R   Y +
Sbjct: 9   VAGRWQA-GSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALTYAQ 64

Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R+ ++     +L+ + D    + T  N       +  ++        YYA     +    
Sbjct: 65  RAALLAAIVKVLQANRDAYYDIAT-ANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDAR 123

Query: 189 APADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
              DG          +  Q +  P  GVA  I  +NFP      K  PAL  G  +++K 
Sbjct: 124 LLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKP 183

Query: 239 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM-EVDKLAFTGSTTTGK 296
           A  T      + K +  AG LP G L++V G    + A L  H+   D ++FTGS  T  
Sbjct: 184 ATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTGSAETAA 239

Query: 297 I------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ------- 343
           +      V+Q + + N++  +L        ++  DA     A    + LF  +       
Sbjct: 240 VLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA----FDLFVKEVVREMTV 290

Query: 344 --GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
             GQ C A  R FV E++YD   E   A   K  VG+P   G++ GP V+
Sbjct: 291 KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVS 340

Length = 521

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 97/360 (26%), Positives = 143/360 (39%), Gaps = 64/360 (17%)

Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MTAYE 128
           + GQ+    +G      D  TG+V+  V+  E  D   AV+ AR+    GP  R +T +E
Sbjct: 5   VAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFHE 60

Query: 129 RSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
           R+ ++   A  L    +++ AL         D+    +    T       LF  YA    
Sbjct: 61  RAAMLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGT-------LF-AYASLGR 112

Query: 183 KIQGLTAPADGPYHVQTLHEPI----------------GVAGQIIPWNFPLLMFAWKVGP 226
           +        +  + V+   EP+                GVA  I  +NFP+     K  P
Sbjct: 113 RE-----LPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAP 167

Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDK 285
           AL  G  +++K A  T      V K + E+G LP G L ++ G   + G  L    E D 
Sbjct: 168 ALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHLGEQDV 224

Query: 286 LAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
           +AFTGS  T     +L A  N+         E    +  I+  DA          + LF 
Sbjct: 225 VAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----FDLFV 277

Query: 342 NQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            +         GQ C A  R FV E+  D  +E   A   K VVGDP   G++ GP V++
Sbjct: 278 KEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSR 337

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 71.8 bits (176), Expect = 1e-13
 Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 27/325 (8%)

Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
           L+ G++  +++  T   LDP  GD    V + + +++N  V + R+    G    +   E
Sbjct: 2   LVAGKWKGASNYTTL--LDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59

Query: 129 R----SKIILRFADLLERHNDE--IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
           R      +  R A  L +   E   A L      K   Q A  EV +T +    +AG  D
Sbjct: 60  RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQ-ALGEVVVTRKFLENFAG--D 116

Query: 183 KIQ----GLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235
           +++        P D  +  Q       P G    I P+NFPL + A ++  AL  GN  +
Sbjct: 117 QVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPL 174

Query: 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
           LK   +  +      +LLH  G+P   ++++   GPT    L          FTGS+   
Sbjct: 175 LKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSS--- 230

Query: 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADVDKAAELAHYALFFNQGQCCCAGSRTF 354
           K+  +LA + + K V LE  G    I+  D +DVD  A       +   GQ C A S  F
Sbjct: 231 KVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289

Query: 355 VHESVYDQ-FVEKANALAMKRVVGD 378
            HE+      ++K  ALA +R + D
Sbjct: 290 AHENWVQAGILDKLKALAEQRKLED 314

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 24/257 (9%)

Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 174
              +R  II   A+ L      +A+    + G          + M               
Sbjct: 14  HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73

Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
           R        IQ +  P +G  +V+    PIGV   I+P   PL          +A  N  
Sbjct: 74  RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130

Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 290
           + +     P +      LL +A        I+  Y P     LA    SH ++D +  TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189

Query: 291 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
               G+  +  A K S   PV     G SP +V E AD ++A+   H + FF+Q   C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244

Query: 350 GSRTFVHESVYDQFVEK 366
               +V + V D   E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 69.5 bits (171), Expect = 6e-13
 Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 37/256 (14%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI---AALETWDNGKPFEQ 161
           V+ A +AA  AF+   +  ++   R+  +   AD +E   DE+   A  ET   G P E 
Sbjct: 1   VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLP-EA 54

Query: 162 SAQTEVPMTTRLFRYYA------GWADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIP 212
             Q E+  TT   R +A       W D       P   P     ++ +  P+G       
Sbjct: 55  RLQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114

Query: 213 WNFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPP 260
            NFP    A+ V       ALA G  +V+K       T+E   L A  +   L   GLP 
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPA 168

Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSP 319
           GV +++ G G   G AL  H  +  + FTGS   G+ +   AA      P   ELG  +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228

Query: 320 FIVCEDADVDKAAELA 335
             +   A  ++   +A
Sbjct: 229 VFILPGALAERGEAIA 244

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 63.3 bits (154), Expect = 8e-11
 Identities = 95/346 (27%), Positives = 147/346 (42%), Gaps = 32/346 (9%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MT 125
           Q  ++G++  +  G+  P  D  TG+V+  V   E  DV  AV+ AR+    GP  R +T
Sbjct: 2   QSYLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALT 57

Query: 126 AYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAG 179
            +ER++++   A  L    + + AL         DN    +    T    ++   R    
Sbjct: 58  FHERARMLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPD 117

Query: 180 WADKIQGLTAP--ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
                +    P   DG +  + +  P  GVA QI  +NFP+     K  PA   G   + 
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177

Query: 237 KTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
           K A  T   A  + + + E+GL P G L ++ G   +AG  L      D +AFTGS  T 
Sbjct: 178 KPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATA 234

Query: 296 KIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQ 345
               +L A  N+         E    +  I+ EDA  D+  E   +A      L    GQ
Sbjct: 235 D---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDE-PEFDLFAQEIVRELTIKAGQ 290

Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
            C A  R  V +++ +  ++   A   K V+GDP + G+  GP V+
Sbjct: 291 KCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 54.1 bits (131), Expect = 8e-08
 Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 32/206 (15%)

Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 263
           GVA  I  +NFP+     K+ PA   G   ++K A  T      V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209

Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
            ++ G   +AG  L      D + FTGS  T +   +L A  N+      +    PF   
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256

Query: 324 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 366
            +AD         D       + LF  +         GQ C A  R  V  ++ D  +E 
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315

Query: 367 ANALAMKRVVGDPFKGGIQQGPQVNQ 392
             A   K VVGDP   G++ G   + 
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASL 341

Length = 675

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)

Query: 192 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 247
           D       + EPIGV   I P   P     +K   +L   N+I+     +  + T  +A 
Sbjct: 84  DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143

Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            + +    AG P  ++  +          L     +  L  TG     K     AA S+ 
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198

Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           KP      G +P ++ E AD+ +A +    +  F+ G  C +     V +SVYD+ +  
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 69/286 (24%), Positives = 106/286 (37%), Gaps = 52/286 (18%)

Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
             V+ AV+AA+ A  +  + + T  +R KII    + L  + +E+A +         E+ 
Sbjct: 4   ATVDDAVAAAKAAQKQ--YRKCTLADREKIIEAIREALLSNAEELAEMA-------VEE- 53

Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
                   T + R      DKI      A+   G   +           TL E  P GV 
Sbjct: 54  --------TGMGRV----EDKIAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVI 101

Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
           G I P   P           LA GN +V          + Y  +L+++A    G P  ++
Sbjct: 102 GAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLV 161

Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
             V          L +H +++ L  TG    G  V++ A  S  K +    G   G  P 
Sbjct: 162 VTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI----GAGAGNPPV 213

Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           +V E AD++KAA        F+    C A       +SV D  +  
Sbjct: 214 VVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAA 259

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 257
           EP+GV   +IP   P     +K   AL   N I+     +  + +  +A  + +    AG
Sbjct: 94  EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153

Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 315
            P G++  +          L  H +VD +  TG     K     AA S+ KP    +G  
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205

Query: 316 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
            G  P  + E AD+ +A +    +  F+ G  C +     V + +YD+         +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

>gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional

 Score = 40.3 bits (95), Expect = 0.002
 Identities = 74/294 (25%), Positives = 110/294 (37%), Gaps = 57/294 (19%)

Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
             V+ AV+AA+ A     + + +   R +II    + L  H +E+A L         E+ 
Sbjct: 36  ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELA-------VEE- 85

Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
                   T + R      DKI    A A+   G   +           TL E  P GV 
Sbjct: 86  --------TGMGRV----EDKIAKNVAAAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVI 133

Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
           G + P   P           LA GN++V          +L   +LL+EA    G P  ++
Sbjct: 134 GAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLV 193

Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
             V+         L  H  +  L  TG    G  V++ A KS  K +    G   G  P 
Sbjct: 194 VTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAMKSGKKAI----GAGAGNPPV 245

Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
           +V E AD++KAA        F+    C A     V +SV D+ +       M++
Sbjct: 246 VVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR-----LMEK 294

Length = 465

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	392
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.94
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.87
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.67
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.79
PRK11809	1318	putA trifunctional transcriptional regulator/proli	97.02
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	96.37
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	87.96
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	87.88
COG1438	150	ArgR Arginine repressor [Transcription]	84.75
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	83.94

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=4.3e-81  Score=640.75  Aligned_cols=383  Identities=84%  Similarity=1.326  Sum_probs=361.3

Q ss_pred             CcccchhhhhhccccCCCc-cccccCCCchhhhHHHHhhhhccccccchhhhhcCCCCCCCCCCCccCceeCCEeeeCCC
Q 016240            1 MAARRIPLLLSRSFTSSSP-TLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSAS   79 (392)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~   79 (392)
                      ||+||+|+|||||++++++ +++++|++++.+++.+      ||+|   +.++.|+.|.+++++.+.++||||+|+...+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~   71 (538)
T PLN02466          1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGRGIR------RFST---AAAAVEEPITPPVQVSYTQLLINGQFVDAAS   71 (538)
T ss_pred             CCchHHHHHHHHHhhcccHHHhhhccccCCCCcccc------cccc---ccccccCcCCCccccccccceECCEEecCCC
Confidence            8999999999999977654 7888999999999999      9988   6566999999999999999999999998777


Q ss_pred             CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh
Q 016240           80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF  159 (392)
Q Consensus        80 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  159 (392)
                      +++++++||+||+++++++.++.+|+++|+++|+++|+.+.|+.++.++|.++|++++++|+++.++|++++++|+|||+
T Consensus        72 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~  151 (538)
T PLN02466         72 GKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY  151 (538)
T ss_pred             CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence            89999999999999999999999999999999999998446999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecC
Q 016240          160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA  239 (392)
Q Consensus       160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps  239 (392)
                      .++...|+..+++.++||+.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus       152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs  231 (538)
T PLN02466        152 EQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA  231 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence            98876799999999999999988887776654444566899999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCc
Q 016240          240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP  319 (392)
Q Consensus       240 ~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~  319 (392)
                      +.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..||+||+|.||||+++|+.|++.++..++||+++|+|||||
T Consensus       232 ~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp  311 (538)
T PLN02466        232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP  311 (538)
T ss_pred             CCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCe
Confidence            99999999999999999999999999999777888999999999999999999999999999985478999999999999


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       320 ~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|||+|+++++||+|++
T Consensus       312 ~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~  384 (538)
T PLN02466        312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDS  384 (538)
T ss_pred             EEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999973

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=7e-79  Score=591.28  Aligned_cols=331  Identities=61%  Similarity=0.997  Sum_probs=321.2

Q ss_pred             CCCcc-CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           62 KVDYT-QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        62 ~~~~~-~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      .+..+ ++||||+|++..++++++++||.||+++++|+.++.+||+.++++|++||+.+.|++++..+|..+|+++++++
T Consensus        16 ~~~~~~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adli   95 (501)
T KOG2450|consen   16 EIQPTLGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLI   95 (501)
T ss_pred             cccchhheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHH
Confidence            34444 89999999999999999999999999999999999999999999999999966799999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      +++.+.|+.+.+.+.|||+.+++..++..+++.+|||++|++++++..++.......++.++|+|||+.|+|||||+.+.
T Consensus        96 e~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~  175 (501)
T KOG2450|consen   96 EQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQ  175 (501)
T ss_pred             HhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHH
Confidence            99999999999999999999999789999999999999999999998888888899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      .|+++|||++||+||+||++++|+|++++++++.++|+|+|++|+|+|.+...+..|.+|++|++|+||||+.+|+.|++
T Consensus       176 awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~  255 (501)
T KOG2450|consen  176 AWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIME  255 (501)
T ss_pred             HHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc-CccCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDP  379 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~vG~p  379 (392)
                      .++.+++||+++|+|||+|.||++|||+|.|++.++++.|+|+||+|++.+|+|||+++||+|+++++++.++ +++|||
T Consensus       256 aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP  335 (501)
T KOG2450|consen  256 AAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDP  335 (501)
T ss_pred             hhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCC
Confidence            9998889999999999999999999999999999999999999999999999999999999999999999966 999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      +|+++++||+||+
T Consensus       336 ~~~~~~qG~~i~~  348 (501)
T KOG2450|consen  336 FDEGTEQGPQISK  348 (501)
T ss_pred             CCcccccccccCH
Confidence            9999999999984

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.8e-75  Score=543.26  Aligned_cols=324  Identities=40%  Similarity=0.687  Sum_probs=311.9

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      +.+.||+|+|+++.++++|++.||.+||+|+.++.++.++.++|++.|+++|.  .|+.++..||.++|++|.++|.+|.
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~  100 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK  100 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence            56899999999998899999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      |+|++++++|.|||+.++. +||.-+..+++||+.+++++.+...+.. ......+.++|+||+++|+|||||..+...+
T Consensus       101 ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK  179 (503)
T KOG2451|consen  101 DDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK  179 (503)
T ss_pred             HHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence            9999999999999999975 6999999999999999999999887643 4667788999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC---chhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~---~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ..+||++||+||+||+++||++++.++++..+||+|+|++|+|+++   ..+.++.|+.+|+|++|+||||+.+|+.++.
T Consensus       180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~  259 (503)
T KOG2451|consen  180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA  259 (503)
T ss_pred             HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence            9999999999999999999999999999999999999999999963   4478999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      +.+. ..|++.+||||+.|+||++|||+|+|++.....+|.++||.|.+.+|+|||++|||+|+.+|.++++++++||-+
T Consensus       260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~  338 (503)
T KOG2451|consen  260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL  338 (503)
T ss_pred             hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence            9997 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      |+++.+||||+.
T Consensus       339 ~~~tt~GpLIne  350 (503)
T KOG2451|consen  339 DPGTTQGPLINE  350 (503)
T ss_pred             CCCCccCCccCH
Confidence            999999999973

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=2.7e-72  Score=566.42  Aligned_cols=319  Identities=52%  Similarity=0.834  Sum_probs=304.7

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|++..+  +++++||.||+++++++.++.+|+++|+++|+.+|+  .|+++++.+|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e   77 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE   77 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            6799999997544  899999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |+.++++|+|||+.+++. |+..+++.++|++..++++.+...+...+...++.++|+|||++|+|||||+++.+|+++|
T Consensus        78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap  156 (472)
T COG1012          78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP  156 (472)
T ss_pred             HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence            999999999999999875 6999999999999999988877655444778899999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+||++.+|+++..+++++.++|+|+|++|+|+|++.+.++.|..||+|++|+||||+++|+.|++.+++ +
T Consensus       157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~  235 (472)
T COG1012         157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N  235 (472)
T ss_pred             HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence            999999999999999999999999999999999999999999777799999999999999999999999999999997 9


Q ss_pred             CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc-CccCCCCCCCCc
Q 016240          307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ  385 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~vG~p~~~~~~  385 (392)
                      +||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.|+
T Consensus       236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~  314 (472)
T COG1012         236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD  314 (472)
T ss_pred             CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999 65 899999999999


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      |||||++
T Consensus       315 ~Gpli~~  321 (472)
T COG1012         315 LGPLISE  321 (472)
T ss_pred             cCCCCCH
Confidence            9999973

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=6.1e-72  Score=567.56  Aligned_cols=323  Identities=40%  Similarity=0.692  Sum_probs=305.6

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...++++++++||.||+++++++.++.+|+++++++|+++|+  .|++++.++|.++|+++++.|+++++
T Consensus        11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~   88 (482)
T PRK11241         11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD   88 (482)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999999766688999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||+.++. .|+..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++
T Consensus        89 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  167 (482)
T PRK11241         89 DLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA  167 (482)
T ss_pred             HHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence            999999999999999976 5999999999999998887765544432 23456789999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.+.++.|++||+||.|.||||+++|+.|++.+++
T Consensus       168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~  247 (482)
T PRK11241        168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK  247 (482)
T ss_pred             HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999999997


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++
T Consensus       248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  326 (482)
T PRK11241        248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV  326 (482)
T ss_pred             -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       327 ~~Gpli~~  334 (482)
T PRK11241        327 TIGPLIDE  334 (482)
T ss_pred             CcCCCCCH
Confidence            99999974

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=1.3e-71  Score=568.13  Aligned_cols=332  Identities=57%  Similarity=0.950  Sum_probs=310.8

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      +.+...++||||+|+...++++++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|++++++|
T Consensus        16 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l   95 (501)
T PLN02766         16 PEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLI   95 (501)
T ss_pred             CCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHH
Confidence            34555678999999976677899999999999999999999999999999999999855699999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      +++.++|++++++|+|||+.++...|+..+++.++|++..+.++.++..+...+...+..++|+|||++|+|||||+...
T Consensus        96 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  175 (501)
T PLN02766         96 EEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMF  175 (501)
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHH
Confidence            99999999999999999998876569999999999999988877665444333455678899999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ++++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+|+|++.+.+..|..||+||.|.||||+++|+.|++
T Consensus       176 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~  255 (501)
T PLN02766        176 FMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ  255 (501)
T ss_pred             HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999977788999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      .++.++++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus       256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~  335 (501)
T PLN02766        256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF  335 (501)
T ss_pred             HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence            99844899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      |+++++||||++
T Consensus       336 ~~~~~~Gpli~~  347 (501)
T PLN02766        336 DPRARQGPQVDK  347 (501)
T ss_pred             CCCCCCCCCCCH
Confidence            999999999973

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=2.6e-71  Score=569.15  Aligned_cols=326  Identities=29%  Similarity=0.426  Sum_probs=306.3

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      ......++||||+|+...++++++++||+||+++++++.++.+|+++|+++|++||+  .|+.++.++|.++|++++++|
T Consensus       109 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L  186 (604)
T PLN02419        109 QMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELI  186 (604)
T ss_pred             ccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence            345567899999999765678899999999999999999999999999999999999  999999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      ++++++|++++++|+|||+.++. .|+..+++.++|++.+++...+...+. ..+...+++++|+|||++|+|||||+..
T Consensus       187 ~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l  265 (604)
T PLN02419        187 RKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMI  265 (604)
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHH
Confidence            99999999999999999999986 599999999999999988877655442 2344567899999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++ +.++.|+.|++||+|.||||+++|+.|+
T Consensus       266 ~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~  344 (604)
T PLN02419        266 PLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIY  344 (604)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHH
Confidence            999999999999999999999999999999999999999999999999954 6788999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      ++++. +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++ +|+|+++|+++++++++|+|
T Consensus       345 ~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p  422 (604)
T PLN02419        345 ARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCG  422 (604)
T ss_pred             HHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      .|++++|||||++
T Consensus       423 ~d~~t~~GPlis~  435 (604)
T PLN02419        423 SEPDADLGPVISK  435 (604)
T ss_pred             CCCCCCccCCCCH
Confidence            9999999999973

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=5.8e-71  Score=561.61  Aligned_cols=329  Identities=81%  Similarity=1.341  Sum_probs=309.7

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ++.++||||+|+...++++++++||+||+++++++.++.+|++++++.|+++|+.+.|++++.++|.++|++++++|+++
T Consensus         2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   81 (476)
T cd07142           2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH   81 (476)
T ss_pred             CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence            56788999999976677899999999999999999999999999999999999733599999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||+.++...|+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...+++
T Consensus        82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  161 (476)
T cd07142          82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK  161 (476)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence            99999999999999999876669999999999999998887766555333455678999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+++|+.|++.++
T Consensus       162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa  241 (476)
T cd07142         162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA  241 (476)
T ss_pred             HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999977778999999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      +.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|||++++
T Consensus       242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  321 (476)
T cd07142         242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG  321 (476)
T ss_pred             HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            54789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||+|++
T Consensus       322 ~~~Gpli~~  330 (476)
T cd07142         322 VEQGPQVDK  330 (476)
T ss_pred             CcCCcCcCH
Confidence            999999973

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=4.8e-70  Score=554.57  Aligned_cols=327  Identities=47%  Similarity=0.836  Sum_probs=306.9

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...++++++++||.||+++++++.++.+|++++++.|++||+.+.|++++.++|.++|++++++|+++.+
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            36899999997667889999999999999999999999999999999999984469999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC----CCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +|++++++|+|||+.++...|+..+++.++|++.+.++..+...+..    .+...+..++|+|||++|+|||||+...+
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~  165 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA  165 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence            99999999999999988667999999999999999888766554422    22346788999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.++.|..|++|++|.||||+.+|+.|++.
T Consensus       166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  245 (486)
T cd07140         166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS  245 (486)
T ss_pred             HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240          302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK  381 (392)
Q Consensus       302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~  381 (392)
                      ++..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus       246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~  325 (486)
T cd07140         246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD  325 (486)
T ss_pred             HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence            98547899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCC
Q 016240          382 GGIQQGPQVNQ  392 (392)
Q Consensus       382 ~~~~~Gpli~~  392 (392)
                      +++++||||++
T Consensus       326 ~~~~~Gpli~~  336 (486)
T cd07140         326 RSTDHGPQNHK  336 (486)
T ss_pred             CCCcCCCCcCH
Confidence            99999999973

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=1e-69  Score=550.72  Aligned_cols=322  Identities=39%  Similarity=0.667  Sum_probs=302.2

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+.. ++.+++++||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|++++++|+++++
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ   78 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            368999999964 578899999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||+.++...|+..+++.++|++...+.+.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus        79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  158 (472)
T TIGR03374        79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL  158 (472)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence            9999999999999988766699999999999998877665542221 124456889999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|..|++||.|.||||+++|+.|++.++.
T Consensus       159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~  237 (472)
T TIGR03374       159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP  237 (472)
T ss_pred             HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999885 99999999999777889999999999999999999999999999987


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus       238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~  316 (472)
T TIGR03374       238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST  316 (472)
T ss_pred             -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       317 ~~Gpli~~  324 (472)
T TIGR03374       317 ELGPLSSL  324 (472)
T ss_pred             cCCCCCCH
Confidence            99999973

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2e-69  Score=551.83  Aligned_cols=326  Identities=44%  Similarity=0.737  Sum_probs=306.6

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-----DEGPWPRMTAYERSKIILRFA  137 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~-----~~g~W~~~~~~~R~~~L~~~a  137 (392)
                      +...++||||+|+...++++++++||+||+++++++.++.+|++++++.|+++|     +  .|++++..+|.++|++++
T Consensus         5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a   82 (503)
T PLN02467          5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA   82 (503)
T ss_pred             cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence            344589999999976667899999999999999999999999999999999999     7  999999999999999999


Q ss_pred             HHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC---CCC-CCCeeEEEecccceEEEEcCC
Q 016240          138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PAD-GPYHVQTLHEPIGVAGQIIPW  213 (392)
Q Consensus       138 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~GVv~~i~p~  213 (392)
                      ++|++++++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...   ... .+...+++++|+|||++|+||
T Consensus        83 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  161 (503)
T PLN02467         83 AKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW  161 (503)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence            99999999999999999999999987 5999999999999999888765532   111 234568899999999999999


Q ss_pred             cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChH
Q 016240          214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT  293 (392)
Q Consensus       214 n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~  293 (392)
                      |||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+.++.|..|++||.|.||||+.
T Consensus       162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~  241 (503)
T PLN02467        162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA  241 (503)
T ss_pred             ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence            99999999999999999999999999999999999999999999999999999997778899999999999999999999


Q ss_pred             HHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       294 ~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      +|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus       242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  320 (503)
T PLN02467        242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN  320 (503)
T ss_pred             HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence            99999999987 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCccccCCCC
Q 016240          374 RVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       374 ~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++|||.|+++++|||+++
T Consensus       321 l~~g~p~~~~~~~Gpli~~  339 (503)
T PLN02467        321 IKISDPLEEGCRLGPVVSE  339 (503)
T ss_pred             cCCCCCCCCCCCcCCCCCH
Confidence            9999999999999999873

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-69  Score=553.74  Aligned_cols=325  Identities=42%  Similarity=0.730  Sum_probs=307.1

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      .+.++||||+|+...++++++++||.||+++++++.++.+|++++++.|+++++  .|+.++.++|.++|++++++|+++
T Consensus         5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (488)
T PRK13252          5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER   82 (488)
T ss_pred             ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            345789999999766688999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||..+++..|+..+++.++++++..+.+.+...+...+...+.+++|+|||++|+|||||+...+++
T Consensus        83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~  162 (488)
T PRK13252         83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK  162 (488)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence            99999999999999999887669999999999999988877665544334456788999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|++. .++.|..|+++|.|.||||+++|+.|.+.++
T Consensus       163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa  241 (488)
T PRK13252        163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA  241 (488)
T ss_pred             HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999998665 8899999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      . +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus       242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  320 (488)
T PRK13252        242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA  320 (488)
T ss_pred             h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            7 799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       321 ~~~gpli~~  329 (488)
T PRK13252        321 TNFGPLVSF  329 (488)
T ss_pred             CcccccCCH
Confidence            999999973

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.9e-69  Score=552.04  Aligned_cols=325  Identities=44%  Similarity=0.724  Sum_probs=306.6

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+...++++++++||+||+++++++.++.+|++++++.|++||+  .|++++.++|.++|++++++|+++
T Consensus        23 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  100 (498)
T PLN02278         23 LRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIAN  100 (498)
T ss_pred             CcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            345799999998765678999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      .++|++++++|+|||..++. .|+..+++.+++++...+++.+...+.. .+...+++++|+|||++|+|||||++..++
T Consensus       101 ~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~  179 (498)
T PLN02278        101 KEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITR  179 (498)
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHH
Confidence            99999999999999999976 5999999999999999888766544432 244567789999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ++++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.+.++.|+.||+||.|+||||+++|+.|++.+
T Consensus       180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a  259 (498)
T PLN02278        180 KVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA  259 (498)
T ss_pred             HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997777889999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240          303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG  382 (392)
Q Consensus       303 a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~  382 (392)
                      ++ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus       260 a~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~  338 (498)
T PLN02278        260 AA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEE  338 (498)
T ss_pred             hh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            87 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCC
Q 016240          383 GIQQGPQVNQ  392 (392)
Q Consensus       383 ~~~~Gpli~~  392 (392)
                      ++++||||++
T Consensus       339 ~~~~Gpli~~  348 (498)
T PLN02278        339 GVTQGPLINE  348 (498)
T ss_pred             CCcCCCccCH
Confidence            9999999873

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=2.6e-69  Score=550.12  Aligned_cols=332  Identities=61%  Similarity=1.043  Sum_probs=311.3

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL  139 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~~  139 (392)
                      +.+++.++||||+|+...++++++++||.||+++++++.++.++++++++.|++||+.+ .|++++.++|.++|+++++.
T Consensus         2 ~~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~   81 (481)
T cd07141           2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADL   81 (481)
T ss_pred             cccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHH
Confidence            35677899999999976678899999999999999999999999999999999999732 69999999999999999999


Q ss_pred             HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      |+++.++|++++++|+|||..++...|+..+++.+++++.+.+++.+...+...+...+..++|+|||++|+|||||+..
T Consensus        82 l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  161 (481)
T cd07141          82 IERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLM  161 (481)
T ss_pred             HHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHH
Confidence            99999999999999999999776666999999999999999888877655444445578899999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|++||.|+||||+.+|+.|+
T Consensus       162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~  241 (481)
T cd07141         162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ  241 (481)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777889999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p  321 (481)
T cd07141         242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP  321 (481)
T ss_pred             HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence            98875478999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      +|+++++||||++
T Consensus       322 ~~~~~~~gpli~~  334 (481)
T cd07141         322 FDPKTEQGPQIDE  334 (481)
T ss_pred             CCCCCCCcCCCCH
Confidence            9999999999973

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=2.2e-69  Score=550.23  Aligned_cols=322  Identities=44%  Similarity=0.688  Sum_probs=302.4

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .+||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  . |++++.++|.++|+++++.|+++.+
T Consensus         1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (477)
T cd07113           1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGE   78 (477)
T ss_pred             CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHH
Confidence            368999999766678899999999999999999999999999999999998  5 9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC------CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      +|++++++|+|||+.++...|+..+++.+++++.+.....+...+.      ..+...+..++|+|||++|+|||||+..
T Consensus        79 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  158 (477)
T cd07113          79 ELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMI  158 (477)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHH
Confidence            9999999999999998765699999999999999888766554321      1224567899999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++. .+..|+.|++||+|.||||+++|+.|+
T Consensus       159 ~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~  237 (477)
T cd07113         159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIG  237 (477)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999765 889999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.+++ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       238 ~~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  316 (477)
T cd07113         238 RQAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP  316 (477)
T ss_pred             HHHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      +|++++|||||++
T Consensus       317 ~~~~~~~gpli~~  329 (477)
T cd07113         317 MDESVMFGPLANQ  329 (477)
T ss_pred             CCCCCCCCCCcCH
Confidence            9999999999973

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=2e-69  Score=551.56  Aligned_cols=323  Identities=27%  Similarity=0.484  Sum_probs=302.5

Q ss_pred             CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ...+.++||||+|+.  ++.+++++||.||+++++++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|+
T Consensus        17 ~~~~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~   92 (508)
T PLN02315         17 SSRNLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALR   92 (508)
T ss_pred             CccccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            345568999999985  467899999999999999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      ++.++|++++++|+|||+.++. .|+..+++.++|+++.++.+.+...+.. .+...+..++|+|||++|+|||||+...
T Consensus        93 ~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  171 (508)
T PLN02315         93 AKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVL  171 (508)
T ss_pred             hHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence            9999999999999999999975 6999999999999998888766554432 2345577899999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHH----HHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK  296 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~----l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~  296 (392)
                      ++++++||++||+||+|||+.+|+++..    +.++|.++|+|+|++|++++ +.+.+..|..|+++|+|.||||+++|+
T Consensus       172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~  250 (508)
T PLN02315        172 GWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGL  250 (508)
T ss_pred             HHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            9999999999999999999999999987    67788999999999999998 777899999999999999999999999


Q ss_pred             HHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       297 ~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      .|++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       251 ~v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v  329 (508)
T PLN02315        251 MVQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKI  329 (508)
T ss_pred             HHHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            99999886 88999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCC
Q 016240          377 GDPFKGGIQQGPQVN  391 (392)
Q Consensus       377 G~p~~~~~~~Gpli~  391 (392)
                      |||+|+++++||||+
T Consensus       330 G~p~~~~~~~Gpli~  344 (508)
T PLN02315        330 GDPLEKGTLLGPLHT  344 (508)
T ss_pred             CCCCCCCCCCCCCcC
Confidence            999999999999997

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=6.5e-69  Score=546.34  Aligned_cols=326  Identities=55%  Similarity=0.920  Sum_probs=305.4

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      .++||||+|+...++.++.++||.||+++++++.++.+|+++++++|+++|.. .|+ .++.++|.++|+++++.|+++.
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~   85 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL   85 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence            46899999997666788999999999999999999999999999999999971 499 9999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      ++|++++++|+|||+.+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  165 (481)
T cd07143          86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI  165 (481)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence            99999999999999976655699999999999999998876655443334566789999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.++.|..||++|.|.||||+.+|+.|++.++.
T Consensus       166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~  245 (481)
T cd07143         166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK  245 (481)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777788999999999999999999999999999885


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                      .+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++
T Consensus       246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  325 (481)
T cd07143         246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT  325 (481)
T ss_pred             hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||+|++
T Consensus       326 ~~gpli~~  333 (481)
T cd07143         326 FQGPQVSQ  333 (481)
T ss_pred             CCCCCcCH
Confidence            99999873

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=5.4e-69  Score=546.17  Aligned_cols=322  Identities=46%  Similarity=0.780  Sum_probs=304.0

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|+++++.|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL   79 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            579999999766678999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |++++++|+|||+.++...|+..+++.+++++.+.....+...+...+...+.+++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~  159 (475)
T cd07117          80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP  159 (475)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence            99999999999999987669999999999999887776655444333445688999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++..++++|.++ +|+|++|+|+|++.+.+..|+.|+++|.|.||||+++|+.|++.+++ +
T Consensus       160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~  237 (475)
T cd07117         160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K  237 (475)
T ss_pred             HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999985 99999999999777888999999999999999999999999999987 8


Q ss_pred             CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCcc
Q 016240          307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ  386 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~  386 (392)
                      ++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|+|+++++
T Consensus       238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~  317 (475)
T cd07117         238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM  317 (475)
T ss_pred             CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 016240          387 GPQVNQ  392 (392)
Q Consensus       387 Gpli~~  392 (392)
                      ||+|++
T Consensus       318 gpli~~  323 (475)
T cd07117         318 GAQVNK  323 (475)
T ss_pred             cCcCCH
Confidence            999873

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=3.9e-69  Score=548.16  Aligned_cols=322  Identities=46%  Similarity=0.773  Sum_probs=305.9

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL   79 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999776789999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |++++++|+|||+.++...|+..+++.+++++.+.....+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~  159 (480)
T cd07559          80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP  159 (480)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999887679999999999999988877665544444556788999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|..|++||.|.||||+++|+.|++.+++ +
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~  237 (480)
T cd07559         160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N  237 (480)
T ss_pred             HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999996 99999999999777889999999999999999999999999999987 8


Q ss_pred             CccEEEecCCCCcEEEcCCC-----CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240          307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK  381 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~dA-----Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~  381 (392)
                      ++|+++|+|||||+||++||     |+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus       238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~  317 (480)
T cd07559         238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD  317 (480)
T ss_pred             CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999     9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCC
Q 016240          382 GGIQQGPQVNQ  392 (392)
Q Consensus       382 ~~~~~Gpli~~  392 (392)
                      +++++||||++
T Consensus       318 ~~~~~gpli~~  328 (480)
T cd07559         318 PETMMGAQVSK  328 (480)
T ss_pred             CCCcCCCCcCH
Confidence            99999999973

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-68  Score=545.41  Aligned_cols=321  Identities=39%  Similarity=0.677  Sum_probs=301.1

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      ++||||+|+.  ++++++++||+||+++++++.++.+|++++++.|++||.  . |++++.++|.++|++++++|+++.+
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~   77 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD   77 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            5799999985  578999999999999999999999999999999999998  8 9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC----CCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +|++++++|+|||..++...|+..+++.+++++.....+.+...+.    ..+...+..++|+|||++|+|||||+...+
T Consensus        78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~  157 (481)
T TIGR03216        78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT  157 (481)
T ss_pred             HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence            9999999999999988765699999999999999887765554321    113456788999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCch-hHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~-~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      +++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+|+|++. +.++.|..|++||.|.||||+.+|+.|++
T Consensus       158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~  237 (481)
T TIGR03216       158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK  237 (481)
T ss_pred             HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654 47888999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      ++++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus       238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~  316 (481)
T TIGR03216       238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD  316 (481)
T ss_pred             HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9987 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      |++++|||||++
T Consensus       317 ~~~~~~gpli~~  328 (481)
T TIGR03216       317 DPATNMGPLISA  328 (481)
T ss_pred             CCCCcCCCCCCH
Confidence            999999999873

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=9e-69  Score=547.35  Aligned_cols=321  Identities=43%  Similarity=0.734  Sum_probs=302.8

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||.||+++++++.++.+|++++++.|++|++  .|++++.++|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~   79 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE   79 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999766678999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh-hcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      |++++++|+|||+.+++ .|+..+++.+++++....+ ..+...+.. ....+..++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  157 (488)
T TIGR02299        80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA  157 (488)
T ss_pred             HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence            99999999999999987 6999999999999988773 344433332 34567889999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|++||.|.||||+++|+.|++.+++ 
T Consensus       158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~-  236 (488)
T TIGR02299       158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD-  236 (488)
T ss_pred             HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999998777788899999999999999999999999999987 


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCc
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ  385 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~  385 (392)
                      +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus       237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~  316 (488)
T TIGR02299       237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE  316 (488)
T ss_pred             cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      +||+|++
T Consensus       317 ~Gpli~~  323 (488)
T TIGR02299       317 VGPLIHP  323 (488)
T ss_pred             CCCCcCH
Confidence            9999973

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-68  Score=543.95  Aligned_cols=327  Identities=43%  Similarity=0.741  Sum_probs=307.5

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...++++++++||+||+++++++.++.+|+++++++|+++|+.+.|+.+|.++|.++|+++++.|+++.+
T Consensus        20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   99 (494)
T PRK09847         20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE   99 (494)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            36899999997667889999999999999999999999999999999999974469999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      +|++++++|+|||+.++...|+..+++.++|++...+++.+...+...+...+..++|+|||++|+|||||+...+++++
T Consensus       100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  179 (494)
T PRK09847        100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG  179 (494)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence            99999999999999887666999999999999999888876655444445568899999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|.++..+++++.++|+|+|+||+|+|++.+.+..|..|+++|.|.||||+.+|+.|.+.++..
T Consensus       180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~  259 (494)
T PRK09847        180 PALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS  259 (494)
T ss_pred             HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999997778889999999999999999999999999998844


Q ss_pred             CCccEEEecCCCCcEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dA-Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                      +++|+++|+||+||+||.+|+ |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus       260 ~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  339 (494)
T PRK09847        260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPAT  339 (494)
T ss_pred             CCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            789999999999999999997 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       340 ~~gpli~~  347 (494)
T PRK09847        340 TMGTLIDC  347 (494)
T ss_pred             cCCCCcCH
Confidence            99999873

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=3e-68  Score=542.13  Aligned_cols=326  Identities=65%  Similarity=1.070  Sum_probs=306.1

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...++++++++||.||+++++++.++.+|++++++.|++||+...|++++.++|.++|+++++.|+++.+
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            47899999987667789999999999999999999999999999999999992225599999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      +|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...+++++
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  163 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA  163 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence            99999999999998776667999999999999998887766655444456678899999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|.++..++++|.++|+|+|++|+|++++.+.+..|..|+++|.|.||||+++|+.|++.++..
T Consensus       164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~  243 (476)
T cd07091         164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS  243 (476)
T ss_pred             HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999997777889999999999999999999999999998865


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCc
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ  385 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~  385 (392)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||++++++
T Consensus       244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~  323 (476)
T cd07091         244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF  323 (476)
T ss_pred             CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCC
Q 016240          386 QGPQVN  391 (392)
Q Consensus       386 ~Gpli~  391 (392)
                      +||+++
T Consensus       324 ~gpli~  329 (476)
T cd07091         324 QGPQVS  329 (476)
T ss_pred             CCCCcC
Confidence            999987

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=2.5e-68  Score=546.35  Aligned_cols=325  Identities=30%  Similarity=0.415  Sum_probs=302.8

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ....++||||+|+.. ++.+++++||.| |+++++++.++.+|++++++.|+++|+  .|++++..+|.++|++++++|+
T Consensus        29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~  105 (533)
T TIGR01236        29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLS  105 (533)
T ss_pred             CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence            356789999999974 567899999997 899999999999999999999999999  9999999999999999999999


Q ss_pred             -hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC-CCCCCCeeEEEeccc-ceEEEEcCCcccHH
Q 016240          142 -RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVAGQIIPWNFPLL  218 (392)
Q Consensus       142 -~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~  218 (392)
                       +++++|++++++|+|||+.++...++..+++.++|++.++.++.+... ....+...++.++|+ |||++|+|||||+.
T Consensus       106 ~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~  185 (533)
T TIGR01236       106 GPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAI  185 (533)
T ss_pred             hhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHH
Confidence             599999999999999999997653499999999999998887765443 222355678899999 99999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240          219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV  298 (392)
Q Consensus       219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i  298 (392)
                      ...+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.++.|+.||+|++|.||||+++|+.|
T Consensus       186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i  264 (533)
T TIGR01236       186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL  264 (533)
T ss_pred             HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            9999999999 899999999999999999999999999999999999999777889999999999999999999999999


Q ss_pred             HHHhhhCCCc------cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHh
Q 016240          299 LQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM  372 (392)
Q Consensus       299 ~~~aa~~~~~------~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~  372 (392)
                      ++.+++ +++      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus       265 ~~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  343 (533)
T TIGR01236       265 WKWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELA  343 (533)
T ss_pred             HHHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHh
Confidence            999987 665      4999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCCCCCccccCCCC
Q 016240          373 KRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       373 ~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++++|||+|+++++||||++
T Consensus       344 ~l~~G~p~d~~t~~Gpli~~  363 (533)
T TIGR01236       344 EVKVGDPDDFSNFMGAVIDE  363 (533)
T ss_pred             cCCcCCCCCCCCcccccCCH
Confidence            99999999999999999973

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=3.5e-68  Score=542.50  Aligned_cols=322  Identities=46%  Similarity=0.771  Sum_probs=304.3

Q ss_pred             eeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 016240           69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA  148 (392)
Q Consensus        69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~  148 (392)
                      ||||+|+...++.+++++||+||+++++++.++.+|++++++.|+++|+++.|++++.++|.++|+++++.|+++.++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            68999987656789999999999999999999999999999999999974469999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHH
Q 016240          149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL  228 (392)
Q Consensus       149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL  228 (392)
                      +++++|+|||..++. .|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|||||+...++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            999999999999987 4999999999999999887666554444455678999999999999999999999999999999


Q ss_pred             hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCc
Q 016240          229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK  308 (392)
Q Consensus       229 aaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~  308 (392)
                      ++||+||+|||+.+|+++..++++|.++|+|+|++|+|++++.+.+..|..|+++|+|.||||+++|+.|++++++ +++
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~  238 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK  238 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999999776788999999999999999999999999999987 889


Q ss_pred             cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCcccc
Q 016240          309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP  388 (392)
Q Consensus       309 ~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gp  388 (392)
                      |+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp  318 (482)
T cd07119         239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP  318 (482)
T ss_pred             cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 016240          389 QVNQ  392 (392)
Q Consensus       389 li~~  392 (392)
                      +|++
T Consensus       319 li~~  322 (482)
T cd07119         319 LVSA  322 (482)
T ss_pred             CCCH
Confidence            9973

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=2.7e-68  Score=542.59  Aligned_cols=321  Identities=33%  Similarity=0.511  Sum_probs=302.5

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||+||+++++++.++.+|++++++.|++|++  .|++++.++|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   79 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE   79 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999766678999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      |++++++|+|||+.+++ .|+..+++.+++++...+...++..+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~  158 (478)
T cd07085          80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP  158 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence            99999999999999976 599999999999998777666655432 2244578999999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|+ .+.+..|+.|++||.|.||||+++|+.|++.+++ 
T Consensus       159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-  236 (478)
T cd07085         159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA-  236 (478)
T ss_pred             HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence            99999999999999999999999999999999999999999984 5678899999999999999999999999999887 


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCc
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ  385 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~  385 (392)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++++
T Consensus       237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~  316 (478)
T cd07085         237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD  316 (478)
T ss_pred             cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      +||++++
T Consensus       317 ~gpli~~  323 (478)
T cd07085         317 MGPVISP  323 (478)
T ss_pred             cCCCcCH
Confidence            9999973

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.7e-68  Score=541.33  Aligned_cols=321  Identities=42%  Similarity=0.729  Sum_probs=304.2

Q ss_pred             eeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 016240           69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA  148 (392)
Q Consensus        69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~  148 (392)
                      ||||+|+...++++++++||+||+++++++.++.+|++++++.|+++++  .|+.++.++|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   78 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA   78 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999766678999999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHH
Q 016240          149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL  228 (392)
Q Consensus       149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL  228 (392)
                      +++++|+|||+.++...|+..+++.+++++...++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus        79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  158 (467)
T TIGR01804        79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL  158 (467)
T ss_pred             HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence            99999999999998556999999999999998888766554433334568899999999999999999999999999999


Q ss_pred             hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCc
Q 016240          229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK  308 (392)
Q Consensus       229 aaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~  308 (392)
                      ++||+||+|||+.+|.++..++++|.++|+|+|++|+|++++.+.+..|..|+++|.|.||||+++|+.|++.+++ ++|
T Consensus       159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~  237 (467)
T TIGR01804       159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK  237 (467)
T ss_pred             hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999998767889999999999999999999999999999987 899


Q ss_pred             cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCcccc
Q 016240          309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP  388 (392)
Q Consensus       309 ~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gp  388 (392)
                      |+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||
T Consensus       238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp  317 (467)
T TIGR01804       238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP  317 (467)
T ss_pred             cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 016240          389 QVNQ  392 (392)
Q Consensus       389 li~~  392 (392)
                      ++++
T Consensus       318 li~~  321 (467)
T TIGR01804       318 LISA  321 (467)
T ss_pred             cCCH
Confidence            9973

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=4.9e-68  Score=541.44  Aligned_cols=324  Identities=53%  Similarity=0.889  Sum_probs=304.6

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      .++||||+|+...++.+++++||+||+++++++.++.+|++++++.|++|++  . |+.++.++|.++|+++++.|+++.
T Consensus         8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~   85 (484)
T cd07144           8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR   85 (484)
T ss_pred             cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            4689999999765678899999999999999999999999999999999998  6 889999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      ++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~  165 (484)
T cd07144          86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL  165 (484)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence            99999999999999877655699999999999999988886655443334556889999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.+.++.|..|+++|.|.||||+.+|+.|++.+++
T Consensus       166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~  245 (484)
T cd07144         166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ  245 (484)
T ss_pred             HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999999887


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc-CccCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGG  383 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~vG~p~~~~  383 (392)
                       +++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++ +++|+|++++
T Consensus       246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~  324 (484)
T cd07144         246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD  324 (484)
T ss_pred             -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence             89999999999999999999999999999999999999999999999999999999999999999985 8999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||+|++
T Consensus       325 ~~~gpli~~  333 (484)
T cd07144         325 TVVGPQVSK  333 (484)
T ss_pred             CcCCCCcCH
Confidence            999999873

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=3.7e-68  Score=541.39  Aligned_cols=321  Identities=43%  Similarity=0.725  Sum_probs=301.4

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|++++.++|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (479)
T cd07116           2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM   79 (479)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999876788999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |+.++++|+|||+.++...|+..+++.+++++.......+...+...+...+.+++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (479)
T cd07116          80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP  159 (479)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999998876669999999999999988776555444334455788999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|.+.+.+..|..||+||.|.||||+++|+.|++.+++ +
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~  237 (479)
T cd07116         160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N  237 (479)
T ss_pred             HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence            999999999999999999999999999998 99999999999777789999999999999999999999999999987 8


Q ss_pred             CccEEEecCCCCcEEEcCC------CCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          307 LKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~d------ADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      ++|+++|+|||||+||++|      ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus       238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~  316 (479)
T cd07116         238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL  316 (479)
T ss_pred             CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999988      79999999999864 6999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      ++++++||++++
T Consensus       317 ~~~~~~Gpli~~  328 (479)
T cd07116         317 DTETMIGAQASL  328 (479)
T ss_pred             CCCCcCCCCCCH
Confidence            999999999873

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=5e-68  Score=539.89  Aligned_cols=320  Identities=42%  Similarity=0.673  Sum_probs=301.7

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      ++||||+|+...  ..++++||. ||+++++++.++.+|++++++.|++||+  .|++++.++|.++|+++++.|+++.+
T Consensus         2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~   77 (473)
T cd07097           2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE   77 (473)
T ss_pred             CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            679999998642  347999999 5999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||+.++.. |+..+++.++||+...++..+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus        78 ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i  156 (473)
T cd07097          78 ELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI  156 (473)
T ss_pred             HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence            9999999999999999874 99999999999999888776654432 234567899999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|++|+.|.||||+.+|+.|++.+++
T Consensus       157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~  236 (473)
T cd07097         157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA  236 (473)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999999987


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++
T Consensus       237 -~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  315 (473)
T cd07097         237 -RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV  315 (473)
T ss_pred             -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++|||+++
T Consensus       316 ~~Gpli~~  323 (473)
T cd07097         316 DIGPVVSE  323 (473)
T ss_pred             cCCCCCCH
Confidence            99999973

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=5.9e-68  Score=543.51  Aligned_cols=323  Identities=38%  Similarity=0.570  Sum_probs=305.7

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ..++||||+|+.  ++.+++++||.| |+++++++.++.+|++++++.|++||+  .|++++.++|.++|+++++.|+++
T Consensus        32 ~~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  107 (512)
T cd07124          32 EYPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRR  107 (512)
T ss_pred             ccceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence            457899999986  467899999998 999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||+.++.. |+..+++.++|++.++++..+...+...+...+.+++|+|||++|+|||||+...+++
T Consensus       108 ~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  186 (512)
T cd07124         108 RFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGM  186 (512)
T ss_pred             HHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHH
Confidence            999999999999999999864 9999999999999998888655544344556789999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|+++|.|.||||+++|+.|++.++
T Consensus       187 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa  266 (512)
T cd07124         187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA  266 (512)
T ss_pred             HHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999977788999999999999999999999999999988


Q ss_pred             hC-----CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240          304 KS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       304 ~~-----~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~  378 (392)
                      +.     +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++||
T Consensus       267 ~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~  346 (512)
T cd07124         267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGD  346 (512)
T ss_pred             cccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            63     6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCC
Q 016240          379 PFKGGIQQGPQVNQ  392 (392)
Q Consensus       379 p~~~~~~~Gpli~~  392 (392)
                      |.|+++++|||+++
T Consensus       347 p~d~~~~~Gpli~~  360 (512)
T cd07124         347 PEDPEVYMGPVIDK  360 (512)
T ss_pred             CCCCCCcccCCcCH
Confidence            99999999999974

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=7.2e-68  Score=543.01  Aligned_cols=323  Identities=30%  Similarity=0.398  Sum_probs=301.0

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      ...++||||+|+.  ++++++++||+| |+++++++.++.+|+++++++|++||+  .|++++..+|.++|++++++|++
T Consensus        31 ~~~~~~i~G~~~~--~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  106 (522)
T cd07123          31 VEIPLVIGGKEVR--TGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSG  106 (522)
T ss_pred             cccCeeECCEEcC--CCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence            3467899999986  467899999995 999999999999999999999999999  99999999999999999999996


Q ss_pred             -cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEeccc-ceEEEEcCCcccHHH
Q 016240          143 -HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLLM  219 (392)
Q Consensus       143 -~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~~  219 (392)
                       ++++|+.++++|+|||+.++...|+...++.++|++.+++++.+...+. ..+...++.++|+ |||++|+|||||+..
T Consensus       107 ~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~  186 (522)
T cd07123         107 KYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIG  186 (522)
T ss_pred             hCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHH
Confidence             8999999999999999988765688999999999999888776543322 2245678899998 999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      ..++++||| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|++|+.|.||||+++|+.|+
T Consensus       187 ~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~  265 (522)
T cd07123         187 GNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW  265 (522)
T ss_pred             HHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            999999999 6999999999999999999999999999999999999997777899999999999999999999999999


Q ss_pred             HHhhhCCCc------cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       300 ~~aa~~~~~------~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      +.+++ +++      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus       266 ~~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (522)
T cd07123         266 KQIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKE  344 (522)
T ss_pred             HHHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh
Confidence            99987 666      89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCccccCCCC
Q 016240          374 RVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       374 ~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++|||+|+++++||||++
T Consensus       345 l~~G~p~d~~t~~Gpli~~  363 (522)
T cd07123         345 IKMGDPDDFSNFMGAVIDE  363 (522)
T ss_pred             CccCCCCCCCCCCCCCCCH
Confidence            9999999999999999973

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-68  Score=538.67  Aligned_cols=322  Identities=42%  Similarity=0.711  Sum_probs=303.1

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+.. ++++++++||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|+++++.|+++++
T Consensus         3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   79 (475)
T PRK13473          3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD   79 (475)
T ss_pred             ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999874 678999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||..++...|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus        80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i  159 (475)
T PRK13473         80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL  159 (475)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence            9999999999999988766699999999999998888776543321 123456788999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|..|++||.|.||||+++|+.|++.+++
T Consensus       160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~  238 (475)
T PRK13473        160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD  238 (475)
T ss_pred             HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999 99999999999777889999999999999999999999999999987


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++
T Consensus       239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  317 (475)
T PRK13473        239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT  317 (475)
T ss_pred             -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       318 ~~gpli~~  325 (475)
T PRK13473        318 ELGPLISA  325 (475)
T ss_pred             CCCCCCCH
Confidence            99999973

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=7.5e-68  Score=537.89  Aligned_cols=318  Identities=41%  Similarity=0.611  Sum_probs=301.1

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI  147 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l  147 (392)
                      +||||+|+...++++++++||.||+++++++.++.+|++++++.|++||+  .|+++|.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l   78 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL   78 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999876678999999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240          148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA  227 (392)
Q Consensus       148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  227 (392)
                      ++++++|+|||..++...|+..+++.+++++...+.+.+...    ....+..++|+|||++|+|||||+...++++++|
T Consensus        79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A  154 (466)
T cd07138          79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA  154 (466)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999887666999999999999988777654332    2345778999999999999999999999999999


Q ss_pred             HhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC
Q 016240          228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL  307 (392)
Q Consensus       228 LaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  307 (392)
                      |++||+||+|||+.+|+++..++++|.++|+|+|+||++++++.+.+..|..|++++.|.||||+.+|+.|++.++. ++
T Consensus       155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~  233 (466)
T cd07138         155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV  233 (466)
T ss_pred             HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence            99999999999999999999999999999999999999999777789999999999999999999999999999987 88


Q ss_pred             ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccc
Q 016240          308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG  387 (392)
Q Consensus       308 ~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~G  387 (392)
                      +|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus       234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  313 (466)
T cd07138         234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG  313 (466)
T ss_pred             CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 016240          388 PQVNQ  392 (392)
Q Consensus       388 pli~~  392 (392)
                      |++++
T Consensus       314 pli~~  318 (466)
T cd07138         314 PLASA  318 (466)
T ss_pred             ccCCH
Confidence            99873

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.3e-67  Score=537.86  Aligned_cols=321  Identities=35%  Similarity=0.516  Sum_probs=299.1

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      .+||||+|+.. ++++++++||.||+++++++.++.++++++++.|++||+  .|++++.++|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   78 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE   78 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence            47999999874 467899999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |++++++|+|||+.++. .|+..+++.+++++.+.....+...+...+...+.+++|+|||++|+|||||+...++++++
T Consensus        79 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  157 (487)
T PRK09457         79 LAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP  157 (487)
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence            99999999999999986 59999999999998877666554433223455688999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|..|++||.|.||||+++|+.|+++++...
T Consensus       158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~  236 (487)
T PRK09457        158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP  236 (487)
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999998 5678899999999999999999999999999887645


Q ss_pred             CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcch-HHHHHHHHHHHhcCccCCCC-CCCC
Q 016240          307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGI  384 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~L~~~~~~~~vG~p~-~~~~  384 (392)
                      .+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||+ ++++
T Consensus       237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~  316 (487)
T PRK09457        237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP  316 (487)
T ss_pred             CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence            688999999999999999999999999999999999999999999999999998 99999999999999999996 7899


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       317 ~~Gpli~~  324 (487)
T PRK09457        317 FMGAVISE  324 (487)
T ss_pred             ccCCCcCH
Confidence            99999973

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.8e-67  Score=536.17  Aligned_cols=319  Identities=37%  Similarity=0.631  Sum_probs=300.8

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI  147 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l  147 (392)
                      +||||+|+... +.+++++||+||+++++++.++.+|++++++.|+++++  .|++++.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL   77 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            48999999754 68899999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      ++++++|+|||+.++. .|+..+++.++|++...+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~  156 (478)
T cd07086          78 GRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI  156 (478)
T ss_pred             HHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence            9999999999999876 5999999999999998888766544322 2345678999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ||++||+||+|||+.+|.++..++++|.++    |+|+|+||+|++++. .+..|..|+++|.|.||||+++|+.|++.+
T Consensus       157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a  235 (478)
T cd07086         157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV  235 (478)
T ss_pred             HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999999999999999    999999999998654 889999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240          303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG  382 (392)
Q Consensus       303 a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~  382 (392)
                      ++ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.++
T Consensus       236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  314 (478)
T cd07086         236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE  314 (478)
T ss_pred             hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            87 88999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCC
Q 016240          383 GIQQGPQVNQ  392 (392)
Q Consensus       383 ~~~~Gpli~~  392 (392)
                      ++++||++++
T Consensus       315 ~~~~gpli~~  324 (478)
T cd07086         315 GTLVGPLINQ  324 (478)
T ss_pred             CCCCCCCCCH
Confidence            9999999973

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=4.1e-67  Score=533.36  Aligned_cols=323  Identities=42%  Similarity=0.671  Sum_probs=301.8

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI  147 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l  147 (392)
                      +||||+|+...++++++++||+||+++++++.++.+|+++++++|++||+.+.|++++.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            48999999765678899999999999999999999999999999999998445999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc-cCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      ++++++|+|||..++...|+..+++.+++++...++..+. ..+...+...+..++|+|||++|+|||||+...++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~  160 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP  160 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence            9999999999997776669999999999999988776532 223223456788999999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+| +.+.+..|..|++++.|.||||+.+|+.|++.+++ +
T Consensus       161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~  238 (471)
T cd07139         161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R  238 (471)
T ss_pred             HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence            999999999999999999999999999999999999999998 55688999999999999999999999999999987 8


Q ss_pred             CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCcc
Q 016240          307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ  386 (392)
Q Consensus       307 ~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~  386 (392)
                      ++|+++|+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++
T Consensus       239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~  318 (471)
T cd07139         239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI  318 (471)
T ss_pred             CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 016240          387 GPQVNQ  392 (392)
Q Consensus       387 Gpli~~  392 (392)
                      |||+++
T Consensus       319 gpli~~  324 (471)
T cd07139         319 GPLASA  324 (471)
T ss_pred             CCCCCH
Confidence            999973

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=3.5e-67  Score=537.39  Aligned_cols=325  Identities=33%  Similarity=0.506  Sum_probs=303.8

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ....++||||+|+..  +.+++++||. ||+++++++.++.+|++++++.|++|++  .|++++.++|.++|++++++|+
T Consensus        30 ~~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~  105 (511)
T TIGR01237        30 GKTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIME  105 (511)
T ss_pred             ccccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            345578999999963  5679999999 4999999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-CCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      ++.++|++++++|+|||+.++. .|+..+++.+++++...++..+...+ ...+...+++++|+|||++|+|||||+...
T Consensus       106 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~  184 (511)
T TIGR01237       106 RRRHELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIA  184 (511)
T ss_pred             HCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHH
Confidence            9999999999999999999976 59999999999999998887654432 223456788999999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|++++.|.||||+.+|+.|++
T Consensus       185 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~  264 (511)
T TIGR01237       185 VGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYE  264 (511)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999977778999999999999999999999999999


Q ss_pred             Hhhh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          301 LAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       301 ~aa~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      .++.     .+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       265 ~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~  344 (511)
T TIGR01237       265 DAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLN  344 (511)
T ss_pred             HHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCC
Confidence            8873     37899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCCC
Q 016240          376 VGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~~  392 (392)
                      +|+|.++++++||+|++
T Consensus       345 ~g~~~~~~~~~gpli~~  361 (511)
T TIGR01237       345 VGPTDDPSTQVGPVIDQ  361 (511)
T ss_pred             CCCCCCCCCcCCCCCCH
Confidence            99999999999999973

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=3.1e-67  Score=533.98  Aligned_cols=320  Identities=44%  Similarity=0.736  Sum_probs=303.3

Q ss_pred             eeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 016240           69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA  148 (392)
Q Consensus        69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~  148 (392)
                      ||||+|+...++++++++||.||+++++++.++.++++++++.|++|++  .|++++.++|.++|+++++.|+++.++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   78 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA   78 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999766688999999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240          149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA  227 (392)
Q Consensus       149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  227 (392)
                      +++++|+|||..+++ .|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus        79 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  157 (468)
T cd07088          79 KLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA  157 (468)
T ss_pred             HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence            999999999999976 5999999999999998887766554433 24567888999999999999999999999999999


Q ss_pred             HhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC
Q 016240          228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL  307 (392)
Q Consensus       228 LaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  307 (392)
                      |++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..|+++|.|.||||+++|+.|++.+++ ++
T Consensus       158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~  236 (468)
T cd07088         158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI  236 (468)
T ss_pred             HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence            99999999999999999999999999999999999999999777788999999999999999999999999999987 89


Q ss_pred             ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccc
Q 016240          308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG  387 (392)
Q Consensus       308 ~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~G  387 (392)
                      +|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus       237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  316 (468)
T cd07088         237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG  316 (468)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 016240          388 PQVNQ  392 (392)
Q Consensus       388 pli~~  392 (392)
                      |+|++
T Consensus       317 pli~~  321 (468)
T cd07088         317 PLVNE  321 (468)
T ss_pred             cccCH
Confidence            99973

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=3.9e-67  Score=535.98  Aligned_cols=326  Identities=30%  Similarity=0.487  Sum_probs=305.2

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL  139 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~  139 (392)
                      ..+...++||+|+|+.  ++.+++++||. ||+++++++.++.+|++++++.|++||+  .|+.+|.++|.++|+++++.
T Consensus        14 ~~~~~~~~~i~g~~~~--~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~   89 (500)
T cd07083          14 EFGRAYPLVIGGEWVD--TKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADL   89 (500)
T ss_pred             hccccccceECCEEec--CCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHH
Confidence            4556678999999986  46789999998 6999999999999999999999999999  99999999999999999999


Q ss_pred             HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC--CCCCCCeeEEEecccceEEEEcCCcccH
Q 016240          140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      |+++.++|++++++|+|||+.++. .|+..+++.+++++.++.+..+...  +...+...+.+++|+|||++|+|||||+
T Consensus        90 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~  168 (500)
T cd07083          90 LRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPV  168 (500)
T ss_pred             HHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHH
Confidence            999999999999999999999865 5999999999999999887765432  2223556788899999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|+++|.|.||||+.+|+.
T Consensus       169 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~  248 (500)
T cd07083         169 AIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKK  248 (500)
T ss_pred             HHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999977788999999999999999999999999


Q ss_pred             HHHHhhhCCC------ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHH
Q 016240          298 VLQLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA  371 (392)
Q Consensus       298 i~~~aa~~~~------~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~  371 (392)
                      |++.+++ ++      +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus       249 v~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  327 (500)
T cd07083         249 IYEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRA  327 (500)
T ss_pred             HHHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence            9999887 54      9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCccCCCCCCCCccccCCCC
Q 016240          372 MKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       372 ~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++|||.++++++||+|++
T Consensus       328 ~~~~~G~p~~~~~~~Gpli~~  348 (500)
T cd07083         328 ERLSVGPPEENGTDLGPVIDA  348 (500)
T ss_pred             HcCCCCCCCCCCCCCCCCCCH
Confidence            999999999999999999973

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=5.6e-67  Score=531.84  Aligned_cols=317  Identities=32%  Similarity=0.567  Sum_probs=295.8

Q ss_pred             eeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 016240           69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA  148 (392)
Q Consensus        69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~  148 (392)
                      +|||+|+..  +++++++||.||+++++++.++.+|++++++.|++||+  .|++++.++|.++|+++++.|+++.++|+
T Consensus         2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   77 (474)
T cd07130           2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG   77 (474)
T ss_pred             eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            799999863  57899999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240          149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA  227 (392)
Q Consensus       149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  227 (392)
                      +++++|+|||+.++. +|+..+++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus        78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  156 (474)
T cd07130          78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA  156 (474)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence            999999999999876 5999999999999988777665544322 24456788999999999999999999999999999


Q ss_pred             HhcCCEEEEecCCCChHHHHHHHHH----HHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          228 LACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       228 LaaGN~VIlKps~~~p~t~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      |++||+||+|||+.+|+++..++++    |.++|+|+|++|+|+|+ .+.++.|..|++||.|.||||+++|+.|++.++
T Consensus       157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa  235 (474)
T cd07130         157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA  235 (474)
T ss_pred             HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            9999999999999999999988776    46899999999999984 457899999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus       236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~  314 (474)
T cd07130         236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG  314 (474)
T ss_pred             h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       315 ~~~Gpli~~  323 (474)
T cd07130         315 TLVGPLHTK  323 (474)
T ss_pred             CCCCCCcCH
Confidence            999999973

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7e-67  Score=535.46  Aligned_cols=323  Identities=35%  Similarity=0.548  Sum_probs=301.6

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      ...++||||+|+.  ++++++++||+ ||+++++++.++.+|++++++.|++|++  .|++++.++|.++|++++++|++
T Consensus        35 ~~~~~~i~g~~~~--~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  110 (514)
T PRK03137         35 QDYPLIIGGERIT--TEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR  110 (514)
T ss_pred             cccceeECCEEec--CCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            4557899999996  36789999999 6999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhc-CccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +.++|++++++|+|||+.++. .|+..+++.+++|+..+.+.. +.......+...+.+++|+|||++|+|||||+...+
T Consensus       111 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~  189 (514)
T PRK03137        111 RKHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA  189 (514)
T ss_pred             CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence            999999999999999999986 499999999999999887764 322222234567889999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+.+..|..|++++.|.||||+.+|+.|++.
T Consensus       190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  269 (514)
T PRK03137        190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER  269 (514)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             hhhC-----CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          302 AAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       302 aa~~-----~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      +++.     ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~  349 (514)
T PRK03137        270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV  349 (514)
T ss_pred             HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence            8752     57999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCCC
Q 016240          377 GDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       377 G~p~~~~~~~Gpli~~  392 (392)
                      |||.+++ ++||+|++
T Consensus       350 g~p~~~~-~~Gpli~~  364 (514)
T PRK03137        350 GNPEDNA-YMGPVINQ  364 (514)
T ss_pred             CCCCCcc-CcCCCCCH
Confidence            9999998 99999973

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=8.4e-67  Score=531.99  Aligned_cols=321  Identities=42%  Similarity=0.691  Sum_probs=302.6

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      +||||+|+...++++++++||.| ++++++++.++.+|++++++.|++|++  .|++++.++|.++|+++++.|+++.++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e   78 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE   78 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999766688999999999 689999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      |++++++|+|||+.++. .|+..+++.+++++...+.+.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus        79 la~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  157 (478)
T cd07131          79 LARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF  157 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence            99999999999999976 4999999999999998887665544322 234578999999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|+||++++++.+.+..|..|++||.|.||||+++|+.|++.+++ 
T Consensus       158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~-  236 (478)
T cd07131         158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR-  236 (478)
T ss_pred             HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999999777789999999999999999999999999999987 


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCc
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ  385 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~  385 (392)
                      +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.|++++
T Consensus       237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  316 (478)
T cd07131         237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD  316 (478)
T ss_pred             cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      +||++++
T Consensus       317 ~gpli~~  323 (478)
T cd07131         317 MGPLINE  323 (478)
T ss_pred             CCcCCCH
Confidence            9999973

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=1.3e-66  Score=529.78  Aligned_cols=320  Identities=33%  Similarity=0.511  Sum_probs=301.2

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+...++++++++||.||++|++++.++.+|++++++.|++|++  .|++++.++|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE   79 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999766678999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      |+++++.|+|||+.++. .|+..+++.+++++.....+.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  158 (477)
T TIGR01722        80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP  158 (477)
T ss_pred             HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence            99999999999999976 5999999999999988887766554322 344567899999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+++|+.|.+.++. 
T Consensus       159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~-  236 (477)
T TIGR01722       159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA-  236 (477)
T ss_pred             HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999998 45668899999999999999999999999999887 


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCc
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ  385 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~  385 (392)
                      ++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~  315 (477)
T TIGR01722       237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE  315 (477)
T ss_pred             cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            889999999999999999999999999999999999999999999999999998 9999999999999999999999999


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      |||||++
T Consensus       316 ~Gp~i~~  322 (477)
T TIGR01722       316 MGPLITP  322 (477)
T ss_pred             cCCCcCH
Confidence            9999973

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=7.1e-67  Score=532.47  Aligned_cols=317  Identities=27%  Similarity=0.321  Sum_probs=286.8

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      ++||||+|+.. ++++++++||.||+++++++.++ +|+++|+++|++| |+  .|++++..+|.++|++++++|+++++
T Consensus         2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~   77 (513)
T cd07128           2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE   77 (513)
T ss_pred             ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            67999999975 46889999999999999999875 8999999999997 68  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC--------ccCCCCC-C-CeeEEEecc-cceEEEEcCCc
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVAGQIIPWN  214 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~GVv~~i~p~n  214 (392)
                      +|+++ +.|+|||+.++. .|+..+++.++||+.++++..+        +..+... + ...++.++| +|||++|+|||
T Consensus        78 ~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  155 (513)
T cd07128          78 DLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN  155 (513)
T ss_pred             HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence            99996 899999999876 5999999999999998877642        2222211 1 235678999 59999999999


Q ss_pred             ccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChH
Q 016240          215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT  293 (392)
Q Consensus       215 ~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~  293 (392)
                      ||++..++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+|+|++.+++..+   +.+|+|.||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~  232 (513)
T cd07128         156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA  232 (513)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999998543333332   5789999999999


Q ss_pred             HHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCCC-----HHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHH
Q 016240          294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA  367 (392)
Q Consensus       294 ~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dAD-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L  367 (392)
                      +|+.|++.++ ..+++|+++|+|||||+||++|||     +|.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l  312 (513)
T cd07128         233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL  312 (513)
T ss_pred             HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence            9999999863 237899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhcCccCCCCCCCCccccCCCC
Q 016240          368 NALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       368 ~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++++++|||+|+++++||||++
T Consensus       313 ~~~~~~l~~G~p~~~~~~lGpli~~  337 (513)
T cd07128         313 KARLAKVVVGDPRLEGVRMGPLVSR  337 (513)
T ss_pred             HHHHHhcccCCCccCCCCcCCCCCH
Confidence            9999999999999999999999973

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=1.7e-66  Score=529.57  Aligned_cols=320  Identities=34%  Similarity=0.492  Sum_probs=296.5

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI  147 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l  147 (392)
                      +||||+|+.. ++++++++||.||+++++++.++.+|+++++++|++||+  .|++++.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL   77 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            4899999864 578999999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240          148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA  227 (392)
Q Consensus       148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  227 (392)
                      ++++++|+|||..++. .|+..+++.+++++.......+...+...+...++.++|+|||++|+|||||+...++++++|
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A  156 (484)
T TIGR03240        78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA  156 (484)
T ss_pred             HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999876 599999999999888776665543322223456788999999999999999999999999999


Q ss_pred             HhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC
Q 016240          228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL  307 (392)
Q Consensus       228 LaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  307 (392)
                      |++||+||+|||+.+|+++..+++++.++|+|+|+||+|+| +.+.++.|..|+++|.|+||||+++|+.|++.++....
T Consensus       157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~  235 (484)
T TIGR03240       157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE  235 (484)
T ss_pred             HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999998 56788999999999999999999999999998876457


Q ss_pred             ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcch-HHHHHHHHHHHhcCccCCC-CCCCCc
Q 016240          308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQ  385 (392)
Q Consensus       308 ~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~L~~~~~~~~vG~p-~~~~~~  385 (392)
                      +++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++ |+|+++|+++++++++|+| .|++++
T Consensus       236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~  315 (484)
T TIGR03240       236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF  315 (484)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence            88999999999999999999999999999999999999999999999999985 9999999999999999997 578899


Q ss_pred             cccCCCC
Q 016240          386 QGPQVNQ  392 (392)
Q Consensus       386 ~Gpli~~  392 (392)
                      +|||+++
T Consensus       316 ~gpli~~  322 (484)
T TIGR03240       316 MGAVISL  322 (484)
T ss_pred             ccccCCH
Confidence            9999873

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=8.4e-67  Score=531.74  Aligned_cols=314  Identities=32%  Similarity=0.473  Sum_probs=296.9

Q ss_pred             CCCccCceeCCEeeeCCCCCeeeeeCCCCC-CEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           62 KVDYTQLLINGQFVDSASGKTFPTLDPRTG-DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg-e~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      .+..+++||||+|+.  ++++++++||.|+ ++|++++.++.+|++++++.|+++|+  .|++++..+|.++|++++++|
T Consensus        34 ~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l  109 (500)
T TIGR01238        34 KTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLL  109 (500)
T ss_pred             CceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence            455679999999986  5789999999995 89999999999999999999999999  999999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      +++.++|++++++|+|||+.++. .|+..+++.+++++...+...+           ...++|+|||++|+|||||+...
T Consensus       110 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~  177 (500)
T TIGR01238       110 ELHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIF  177 (500)
T ss_pred             HhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHH
Confidence            99999999999999999999976 5999999999999988765432           13689999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+||+++|++.+.+..|..|+++|.|+||||+.+|+.|++
T Consensus       178 ~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~  257 (500)
T TIGR01238       178 TGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQ  257 (500)
T ss_pred             HHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999876678999999999999999999999999999


Q ss_pred             HhhhCCC---ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          301 LAAKSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       301 ~aa~~~~---~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      .+++ ++   +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       258 ~aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG  336 (500)
T TIGR01238       258 TLAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVG  336 (500)
T ss_pred             HHhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCC
Confidence            9987 44   7999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      +|.+++++|||++++
T Consensus       337 ~p~~~~~~~Gpli~~  351 (500)
T TIGR01238       337 VPHLLTTDVGPVIDA  351 (500)
T ss_pred             CCCCCCCCcCCCCCH
Confidence            999999999999973

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=1.3e-66  Score=528.54  Aligned_cols=317  Identities=39%  Similarity=0.620  Sum_probs=298.3

Q ss_pred             CEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 016240           72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE  151 (392)
Q Consensus        72 G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  151 (392)
                      |+|+...++.+++++||+||+++++++.++.+|++++++.|++|++  .|++++.++|.++|++++++|+++.++|++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~   78 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL   78 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            6788765678899999999999999999999999999999999999  99999999999999999999999999999999


Q ss_pred             HHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhc
Q 016240          152 TWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC  230 (392)
Q Consensus       152 ~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaa  230 (392)
                      ++|+|||+.++.. |+..+++.+++++.+.+...+...+.. .+...+..++|+|||++|+|||||++..++++++||++
T Consensus        79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa  157 (465)
T cd07151          79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL  157 (465)
T ss_pred             HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence            9999999998764 999999999999988877765544432 34557888999999999999999999999999999999


Q ss_pred             CCEEEEecCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCcc
Q 016240          231 GNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP  309 (392)
Q Consensus       231 GN~VIlKps~~~p~t~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~  309 (392)
                      ||+||+|||+.+|.++ ..+.++|.++|+|+|+||+|+|++.+.+..|..|+.++.|.||||+++|+.|++.+++ +++|
T Consensus       158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~  236 (465)
T cd07151         158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK  236 (465)
T ss_pred             CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence            9999999999999996 7899999999999999999998777888999999999999999999999999999987 8999


Q ss_pred             EEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccC
Q 016240          310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ  389 (392)
Q Consensus       310 v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl  389 (392)
                      +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||+
T Consensus       237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  316 (465)
T cd07151         237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL  316 (465)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 016240          390 VNQ  392 (392)
Q Consensus       390 i~~  392 (392)
                      |++
T Consensus       317 i~~  319 (465)
T cd07151         317 INE  319 (465)
T ss_pred             cCH
Confidence            973

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=1.1e-66  Score=529.19  Aligned_cols=315  Identities=48%  Similarity=0.804  Sum_probs=297.6

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+...++++++++||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|++++++|+++
T Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~   97 (480)
T cd07111          20 RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKH   97 (480)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            355789999999765678899999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||+.+++..|+..+++.+++++.+.+...+          ....++|+|||++|+|||||+...+++
T Consensus        98 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~  167 (480)
T cd07111          98 QRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWK  167 (480)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHH
Confidence            9999999999999999998766999999999999888765432          134589999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+|++ +.+..|..|+++|.|.||||+.+|+.|++.++
T Consensus       168 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa  246 (480)
T cd07111         168 ICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATA  246 (480)
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999854 67899999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||+|++
T Consensus       247 ~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~  325 (480)
T cd07111         247 G-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKA  325 (480)
T ss_pred             c-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||++++
T Consensus       326 ~~~gpli~~  334 (480)
T cd07111         326 IDMGAIVDP  334 (480)
T ss_pred             CccccccCH
Confidence            999999873

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=2e-66  Score=525.67  Aligned_cols=307  Identities=27%  Similarity=0.422  Sum_probs=287.8

Q ss_pred             CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh
Q 016240           80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF  159 (392)
Q Consensus        80 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  159 (392)
                      .++++++||+||++|++++.++.++++++++.|+++|+  .|++++.++|.++|++++++|+++.++|++++++|+|||+
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   83 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI   83 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence            46789999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecC
Q 016240          160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA  239 (392)
Q Consensus       160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps  239 (392)
                      .++. .|+..+++.++|++...++..+.......+...++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus        84 ~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs  162 (462)
T PRK13968         84 NQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA  162 (462)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            9876 599999999999998877664432222234566889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCc
Q 016240          240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP  319 (392)
Q Consensus       240 ~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~  319 (392)
                      +.+|+++.++++++.++|+|+|++|+|+|++.. ...+..||++|.|.||||+++|+.|++.++. +++|+++|+|||||
T Consensus       163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p  240 (462)
T PRK13968        163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP  240 (462)
T ss_pred             CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence            999999999999999999999999999986544 4568899999999999999999999999987 89999999999999


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       320 ~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+++
T Consensus       241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~  312 (462)
T PRK13968        241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMAR  312 (462)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999997

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-66  Score=528.07  Aligned_cols=319  Identities=26%  Similarity=0.352  Sum_probs=288.8

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~-~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      .+.||||+|+.. ++++++++||+||+++++++. +.+|+++|++.|++|+ +  .|+++|+.+|.++|++++++|+++.
T Consensus         5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~   80 (521)
T PRK11903          5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANR   80 (521)
T ss_pred             hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            468999999964 457899999999999999997 8899999999999995 8  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC---------CCCeeEEEecc-cceEEEEcCCc
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVAGQIIPWN  214 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P-~GVv~~i~p~n  214 (392)
                      ++|++++++|+|||+.+++ .|+..+++.++||+.++..+.+......         ........++| +|||++|+|||
T Consensus        81 ~ela~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  159 (521)
T PRK11903         81 DAYYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN  159 (521)
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence            9999999999999999976 4999999999999998877654322111         12234667899 69999999999


Q ss_pred             ccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChH
Q 016240          215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT  293 (392)
Q Consensus       215 ~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~  293 (392)
                      ||+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..|   +++|.|.||||++
T Consensus       160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~  236 (521)
T PRK11903        160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE  236 (521)
T ss_pred             hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999998665554444   7899999999999


Q ss_pred             HHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCCC-----HHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHH
Q 016240          294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA  367 (392)
Q Consensus       294 ~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dAD-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L  367 (392)
                      +|+.|++.++ ..+++|+++|+|||||+||++|||     +|.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L  316 (521)
T PRK11903        237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL  316 (521)
T ss_pred             HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence            9999999753 237899999999999999999999     5999999999999999999999999999999999999999


Q ss_pred             HHHHhcCccCCCCCCCCccccCCCC
Q 016240          368 NALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       368 ~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++++++|||+|+++++||||++
T Consensus       317 ~~~~~~l~~G~p~~~~~~~Gpli~~  341 (521)
T PRK11903        317 AARLAKTTVGNPRNDGVRMGPLVSR  341 (521)
T ss_pred             HHHHHhccCCCCCCCcCccCCCCCH
Confidence            9999999999999999999999973

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=4.7e-66  Score=522.25  Aligned_cols=305  Identities=34%  Similarity=0.528  Sum_probs=286.8

Q ss_pred             eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      ++++||.||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   80 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA   80 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence            67899999999999999999999999999999999  9999999999999999999999999999999999999999997


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecC
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA  239 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps  239 (392)
                      . .|+..+++.++|++..+++..+.....   ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus        81 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps  159 (457)
T PRK09406         81 K-AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA  159 (457)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence            5 599999999999999888775443221   123466889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCc
Q 016240          240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP  319 (392)
Q Consensus       240 ~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~  319 (392)
                      +.+|+++.+++++|.++|+|+|+||+|++ +...+..|+.|+++++|+||||+++|+.|++.+++ ++||+++|+|||||
T Consensus       160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~  237 (457)
T PRK09406        160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP  237 (457)
T ss_pred             CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence            99999999999999999999999999986 33467889999999999999999999999999887 89999999999999


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       320 ~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++||||++
T Consensus       238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~  310 (457)
T PRK09406        238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATE  310 (457)
T ss_pred             eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999973

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.2e-65  Score=526.90  Aligned_cols=323  Identities=34%  Similarity=0.508  Sum_probs=302.8

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ..-.||+|+|.  .++++++++||.| |+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|+++
T Consensus        32 ~~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  107 (518)
T cd07125          32 EAIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEAN  107 (518)
T ss_pred             ccCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            34578999997  3688999999999 999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc-cCCCCCCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      .++|++++++|+|||+.++. .|+..+++.+++++...++..+. ..+...+...+..++|+|||++|+|||||+...++
T Consensus       108 ~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~  186 (518)
T cd07125         108 RGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTG  186 (518)
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHH
Confidence            99999999999999999986 59999999999999988876543 23433456678899999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|++++.+.+..|..|+++|.|+||||+++|+.|++.+
T Consensus       187 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a  266 (518)
T cd07125         187 QIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL  266 (518)
T ss_pred             HHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999997666889999999999999999999999999988


Q ss_pred             hhC--CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          303 AKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       303 a~~--~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      +++  .++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus       267 a~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~  346 (518)
T cd07125         267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPW  346 (518)
T ss_pred             hhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCC
Confidence            752  379999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      ++++++||++++
T Consensus       347 ~~~~~~gpli~~  358 (518)
T cd07125         347 DLSTDVGPLIDK  358 (518)
T ss_pred             CCCCCcCCCcCH
Confidence            999999999973

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=2.7e-65  Score=518.96  Aligned_cols=316  Identities=36%  Similarity=0.517  Sum_probs=294.0

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+.  ++++++++||+||+++++++.++.+|++++++.|++++.     .++..+|.++|++++++|+++.+
T Consensus         4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~   76 (472)
T TIGR03250         4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE   76 (472)
T ss_pred             CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence            47899999985  468899999999999999999999999999999988764     68999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-----CCCCCeeEEEeccc-ceEEEEcCCcccHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVAGQIIPWNFPLLM  219 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~  219 (392)
                      +|++++++|+|||+.++. .|+..+++.++|++..+.+..+...+     ...+...+..++|+ |||++|+|||||++.
T Consensus        77 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~  155 (472)
T TIGR03250        77 EISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ  155 (472)
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence            999999999999999876 49999999999999988776654332     11234567899998 999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|+.|++++.|.||||+.+|+.|+
T Consensus       156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  235 (472)
T TIGR03250       156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA  235 (472)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777889999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.++   ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p  312 (472)
T TIGR03250       236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP  312 (472)
T ss_pred             HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence            8874   5899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      +++++++|||+++
T Consensus       313 ~~~~~~~gpli~~  325 (472)
T TIGR03250       313 MDPSVDMGTVIDE  325 (472)
T ss_pred             CCCCCcCCCCCCH
Confidence            9999999999873

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=3e-65  Score=517.84  Aligned_cols=312  Identities=52%  Similarity=0.843  Sum_probs=294.1

Q ss_pred             CeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 016240           81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE  160 (392)
Q Consensus        81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  160 (392)
                      ++++++||+||+++++++.++.+|++++++.|++||+.+.|++++.++|.++|+++++.|+++.++|++++++|+|||+.
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            46899999999999999999999999999999999974459999999999999999999999999999999999999999


Q ss_pred             hhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCC
Q 016240          161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE  240 (392)
Q Consensus       161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~  240 (392)
                      ++...|+..+++.++|++...++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~  161 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE  161 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence            87656999999999999999888766544433445677899999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcE
Q 016240          241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF  320 (392)
Q Consensus       241 ~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~  320 (392)
                      .+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus       162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~  241 (462)
T cd07112         162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN  241 (462)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence            99999999999999999999999999997778899999999999999999999999999998854789999999999999


Q ss_pred             EEcCCC-CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          321 IVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       321 iV~~dA-Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||++|+ |+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++
T Consensus       242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  314 (462)
T cd07112         242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSE  314 (462)
T ss_pred             EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence            999999 999999999999999999999999999999999999999999999999999999999999999873

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=4.6e-65  Score=514.82  Aligned_cols=305  Identities=37%  Similarity=0.599  Sum_probs=288.1

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.+|++++++.|+++|+.+.|+. ++.+|.++|++++++|++++++|++++++|+|||+.++. 
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   78 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-   78 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999998334998 999999999999999999999999999999999999986 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      .|+..+++.+++|+...++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            49999999999999988887665544333456789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          245 SALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       245 t~~~l~~ll~~-aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      ++..++++|.+ +|+|+|++|+|++++.+.+..|..|++++.|.||||+++|+.|++.+++ ++||+++|+|||||+||+
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~  237 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF  237 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence            99999999999 7999999999999777789999999999999999999999999999987 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.|+++++||+|++
T Consensus       238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~  306 (455)
T cd07120         238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDR  306 (455)
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999873

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=2.5e-65  Score=518.30  Aligned_cols=306  Identities=42%  Similarity=0.674  Sum_probs=289.6

Q ss_pred             eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      ++++||.||+++++++.++.+|++++++.|++||+  .|++++.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS   78 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            46889999999999999999999999999999999  9999999999999999999999999999999999999999998


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCCCC-----CCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEe
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADG-----PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK  237 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlK  237 (392)
                      .. |+..+++.+++++...+.+.+...+.+.     +...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K  157 (456)
T cd07145          79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK  157 (456)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence            74 9999999999999887766665443221     34567889999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC
Q 016240          238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK  317 (392)
Q Consensus       238 ps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~  317 (392)
                      ||+.+|+++..++++|.++|+|+|++|+|+|++.+.++.|+.|++++.|.||||+++|+.|++.+++ +++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~  236 (456)
T cd07145         158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS  236 (456)
T ss_pred             CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence            9999999999999999999999999999999777889999999999999999999999999999997 899999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       318 ~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++
T Consensus       237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  311 (456)
T cd07145         237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISP  311 (456)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999873

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=2.4e-65  Score=516.91  Aligned_cols=304  Identities=39%  Similarity=0.700  Sum_probs=288.1

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.++++.+++.|+++++  .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-   77 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999976 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                      .|+..+++.+++++...+++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (448)
T TIGR01780        78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP  157 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence            5999999999999988887766554432 344567789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV  322 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV  322 (392)
                      +++..++++|.++|+|+|++|+|+++ +.+.++.|..|++++.|.||||+.+|+.|++.++. +++|+++|+|||||+||
T Consensus       158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV  236 (448)
T TIGR01780       158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV  236 (448)
T ss_pred             HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence            99999999999999999999999996 67788999999999999999999999999999987 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||||++
T Consensus       237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~  306 (448)
T TIGR01780       237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINE  306 (448)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999973

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-65  Score=518.08  Aligned_cols=321  Identities=33%  Similarity=0.478  Sum_probs=297.0

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+...++++++++||.||+++++++.++.+|++++++.|+++|+  .|+.++..+|.++|+++++.|+++
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~   91 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH   91 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            556899999999766678999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc--cC-----CCC-CCCeeEEEecccceEEEEcCCcc
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TA-----PAD-GPYHVQTLHEPIGVAGQIIPWNF  215 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~--~~-----~~~-~~~~~~~~~~P~GVv~~i~p~n~  215 (392)
                      +++|++++++|+|||..++. .|+..+++.+++++..+.+..+.  ..     +.. .+...+..++|+|||++|+||||
T Consensus        92 ~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~  170 (496)
T PLN00412         92 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY  170 (496)
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence            99999999999999999976 59999999999998876665322  11     111 12345678999999999999999


Q ss_pred             cHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHH
Q 016240          216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG  295 (392)
Q Consensus       216 P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g  295 (392)
                      |+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..|++|+.|.|||| .+|
T Consensus       171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g  249 (496)
T PLN00412        171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG  249 (496)
T ss_pred             hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence            9999999999999999999999999999999999999999999999999999877778999999999999999999 999


Q ss_pred             HHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       296 ~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      +.|++.++   ++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++++
T Consensus       250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  326 (496)
T PLN00412        250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT  326 (496)
T ss_pred             HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence            99998874   689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCCC
Q 016240          376 VGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~~  392 (392)
                      +|+|.+ ++++||++++
T Consensus       327 ~g~p~~-~~~~gp~i~~  342 (496)
T PLN00412        327 VGPPED-DCDITPVVSE  342 (496)
T ss_pred             cCCCcc-cCCcCCCcCH
Confidence            999987 7899999873

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=4.7e-65  Score=532.81  Aligned_cols=317  Identities=26%  Similarity=0.341  Sum_probs=287.5

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      ++||||+|+.. ++++++++||.||+++++++.++ .|+++|+++|+++ |+  .|++++..+|.++|++++++|+++.+
T Consensus         2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~   77 (663)
T TIGR02278         2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE   77 (663)
T ss_pred             ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            67999999875 36789999999999999999999 6999999999996 88  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhc--------CccCCCC--CCCeeEEEeccc-ceEEEEcCCc
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQIIPWN  214 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i~p~n  214 (392)
                      +|++ +++|+|||+.++. .|+..+++.++||+..+++..        ++..+..  .+...+..++|+ |||++|+|||
T Consensus        78 ela~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN  155 (663)
T TIGR02278        78 ALYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN  155 (663)
T ss_pred             HHHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence            9999 5999999999876 599999999999999887632        3333322  123467899997 9999999999


Q ss_pred             ccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChH
Q 016240          215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT  293 (392)
Q Consensus       215 ~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~  293 (392)
                      ||+...++++++||++||+||+|||+.+|+++..++++|.++| +|+|++|+|+|+.   +..+..++.+|.|.||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~  232 (663)
T TIGR02278       156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA  232 (663)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 9999999999842   23333347789999999999


Q ss_pred             HHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCCC-----HHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHH
Q 016240          294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA  367 (392)
Q Consensus       294 ~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dAD-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L  367 (392)
                      +|+.|++.++ ..+++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l  312 (663)
T TIGR02278       233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL  312 (663)
T ss_pred             HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence            9999998753 238899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhcCccCCCCCCCCccccCCCC
Q 016240          368 NALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       368 ~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++++++|||+|+++++||||++
T Consensus       313 ~~~~~~l~vG~p~~~~t~~Gpli~~  337 (663)
T TIGR02278       313 QARLAKVVLGDPREEGVDMGPLVSL  337 (663)
T ss_pred             HHHHHhccCCCccccCCCcCCCCCH
Confidence            9999999999999999999999973

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=8e-65  Score=513.70  Aligned_cols=305  Identities=46%  Similarity=0.763  Sum_probs=287.8

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      +||+||+++++++.++.+|++++++.|+++|+++.|+++|.++|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~   80 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G   80 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence            589999999999999999999999999999984459999999999999999999999999999999999999999976 5


Q ss_pred             chhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          166 EVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      |+..+++.+++++.+.+.+.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~  160 (454)
T cd07118          81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence            99999999999999877776554432 23445678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..++++|.++|+|+|++|+|++++.+.+..|..|+++|.|.||||+++|+.|++.++. +++|+++|+|||||+||++
T Consensus       161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~  239 (454)
T cd07118         161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA  239 (454)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence            999999999999999999999999777788999999999999999999999999999987 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|+|+++++|||+++
T Consensus       240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~  307 (454)
T cd07118         240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINE  307 (454)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999873

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=1.4e-65  Score=520.91  Aligned_cols=313  Identities=51%  Similarity=0.824  Sum_probs=297.5

Q ss_pred             eeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 016240           74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW  153 (392)
Q Consensus        74 ~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~  153 (392)
                      |+.+. +++++++||.||++|++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++
T Consensus         1 w~~~~-~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~   77 (462)
T PF00171_consen    1 WVSSE-SETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL   77 (462)
T ss_dssp             EEE-T-SSEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcCCC-CCEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence            77754 47899999999999999999999999999999999999  9999999999999999999999999999999999


Q ss_pred             hcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCE
Q 016240          154 DNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT  233 (392)
Q Consensus       154 e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  233 (392)
                      |+|||+.++.. |+..+++.++|++++.+++.+...+.+.+...+..++|+|||++|+|||||++..++++++||++||+
T Consensus        78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  156 (462)
T PF00171_consen   78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT  156 (462)
T ss_dssp             HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred             ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence            99999999876 99999999999999999987766665678889999999999999999999999999999999999999


Q ss_pred             EEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEe
Q 016240          234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE  313 (392)
Q Consensus       234 VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~le  313 (392)
                      ||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..||+++.|.||||+++|+.|++.+++ +++|+++|
T Consensus       157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le  235 (462)
T PF00171_consen  157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE  235 (462)
T ss_dssp             EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred             ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence            99999999999999999999999999999999999888999999999999999999999999999999886 89999999


Q ss_pred             cCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       314 lgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +||+||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.|+++++||+++
T Consensus       236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~  313 (462)
T PF00171_consen  236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLIS  313 (462)
T ss_dssp             ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSS
T ss_pred             ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCcccccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999987

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=8e-65  Score=514.58  Aligned_cols=304  Identities=48%  Similarity=0.797  Sum_probs=287.5

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~   78 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW   78 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence            479999999999999999999999999999999  999999999999999999999999999999999999999998764


Q ss_pred             hchhHHHHHHHHHHHHHHhhcC---ccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCC
Q 016240          165 TEVPMTTRLFRYYAGWADKIQG---LTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE  240 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~  240 (392)
                       |+..+++.+++++...+++..   ...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  157 (456)
T cd07110          79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE  157 (456)
T ss_pred             -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence             999999999999998887642   222222 245678899999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcE
Q 016240          241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF  320 (392)
Q Consensus       241 ~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~  320 (392)
                      .+|+++..++++|.++|+|+|+||+|+|++.+.++.|..|+++|.|.||||+++|+.|++++++ +++|+++|+|||||+
T Consensus       158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~  236 (456)
T cd07110         158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI  236 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence            9999999999999999999999999999777788999999999999999999999999999987 899999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       321 iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||+|++
T Consensus       237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~  308 (456)
T cd07110         237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQ  308 (456)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999973

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.6e-64  Score=514.59  Aligned_cols=320  Identities=36%  Similarity=0.526  Sum_probs=301.0

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM-TAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~-~~~~R~~~L~~~a~~l~~~~  144 (392)
                      +++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++|++  .|+++ +.++|.++|+++++.|+++.
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~   78 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK   78 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence            4689999999754 78999999999999999999999999999999999999  99988 99999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      ++|++++++|+|||+.++.. |+..+++.++++++....+.+...+..     .+...+..++|+|||++|+|||||+..
T Consensus        79 ~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  157 (473)
T cd07082          79 EEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL  157 (473)
T ss_pred             HHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence            99999999999999998764 999999999999998887765544322     245568899999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|..|+++|.|.||||+++|+.|.
T Consensus       158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  237 (473)
T cd07082         158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK  237 (473)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777889999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.++   ++|+++|+||+||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus       238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~  314 (473)
T cd07082         238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP  314 (473)
T ss_pred             HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            8875   6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      .++++++||+|++
T Consensus       315 ~~~~~~~gp~i~~  327 (473)
T cd07082         315 WDNGVDITPLIDP  327 (473)
T ss_pred             CCCCCCcCCCCCH
Confidence            9999999999973

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=7.4e-65  Score=514.42  Aligned_cols=305  Identities=40%  Similarity=0.659  Sum_probs=290.8

Q ss_pred             eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      ++++||.||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA   78 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            46789999999999999999999999999999999  9999999999999999999999999999999999999999887


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCC
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ  241 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  241 (392)
                      . .|+..+++.+++++.+.+++.+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  157 (451)
T cd07150          79 W-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE  157 (451)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence            6 4999999999999999888766555443 3556788999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       242 ~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      +|.++..++++|.++|+|+|++|+|++++.+.+..|..|++||.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus       158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i  236 (451)
T cd07150         158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI  236 (451)
T ss_pred             CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence            999999999999999999999999999777889999999999999999999999999999987 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||+++++++||+++
T Consensus       237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  306 (451)
T cd07150         237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLIS  306 (451)
T ss_pred             ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.8e-65  Score=534.10  Aligned_cols=320  Identities=26%  Similarity=0.330  Sum_probs=287.3

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      .+.++||||+|+.. ++++++++||.||+++++++.++ +|+++|+++|++| ++  .|++++..+|+++|++++++|++
T Consensus         3 ~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~   78 (675)
T PRK11563          3 QKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLLE   78 (675)
T ss_pred             ccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHHH
Confidence            34578999999975 56889999999999999999987 6999999999998 78  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhc--------CccCCCCC-C-CeeEEEeccc-ceEEEEc
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPADG-P-YHVQTLHEPI-GVAGQII  211 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~-~-~~~~~~~~P~-GVv~~i~  211 (392)
                      +.++|++ +++|+|||+.++. .|+..+++.++||+.+++...        ++..+... + ...+..++|+ |||++|+
T Consensus        79 ~~~ela~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~  156 (675)
T PRK11563         79 RKEELYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHIN  156 (675)
T ss_pred             hHHHHHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEEC
Confidence            9999998 5899999999976 499999999999999876642        33322211 1 2246788997 9999999


Q ss_pred             CCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeC
Q 016240          212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG  290 (392)
Q Consensus       212 p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftG  290 (392)
                      |||||++..+++++|||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|+.   +..+..++.+++|.|||
T Consensus       157 PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~FTG  233 (675)
T PRK11563        157 AFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTFTG  233 (675)
T ss_pred             CCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 9999999999853   23344446899999999


Q ss_pred             ChHHHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCCC-----HHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHH
Q 016240          291 STTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV  364 (392)
Q Consensus       291 s~~~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dAD-----l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~  364 (392)
                      |+++|+.|++.++ ..+++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|||||+++||+|+
T Consensus       234 S~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~  313 (675)
T PRK11563        234 SAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVI  313 (675)
T ss_pred             cHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHH
Confidence            9999999998632 238999999999999999999995     9999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          365 EKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       365 ~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++|+++++++++|||+|+++++||||++
T Consensus       314 ~~l~~~~~~l~vG~p~d~~t~~GPli~~  341 (675)
T PRK11563        314 EALRARLAKVVVGDPRLEGVRMGALASL  341 (675)
T ss_pred             HHHHHHHhcCccCCCCCCCCcccCCcCH
Confidence            9999999999999999999999999973

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=7.8e-65  Score=514.26  Aligned_cols=304  Identities=54%  Similarity=0.908  Sum_probs=290.8

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      +||.||+++++++.++.++++++++.|++|++  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   79 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL   79 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            69999999999999999999999999999999  9999999999999999999999999999999999999999998766


Q ss_pred             chhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHH
Q 016240          166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS  245 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t  245 (392)
                      |+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~  159 (453)
T cd07115          80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            99999999999999988876655554455667899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCC
Q 016240          246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED  325 (392)
Q Consensus       246 ~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~d  325 (392)
                      +..++++|.++|+|+|++++|++++.+.++.|..|+++|.|+||||+++|+.|++.+++ +++|+++|+||++|+||++|
T Consensus       160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~d  238 (453)
T cd07115         160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFAD  238 (453)
T ss_pred             HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCC
Confidence            99999999999999999999999777788999999999999999999999999999987 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       326 ADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|||+++++++||+|++
T Consensus       239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (453)
T cd07115         239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQ  305 (453)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999873

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=1.3e-64  Score=512.74  Aligned_cols=304  Identities=39%  Similarity=0.584  Sum_probs=288.3

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA  163 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  163 (392)
                      ++||.||+++++++.++.+|++++++.|++||+  .|+ +++..+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~   78 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR   78 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            479999999999999999999999999999999  899 99999999999999999999999999999999999997766


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCcc-CCCC----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEec
Q 016240          164 QTEVPMTTRLFRYYAGWADKIQGLT-APAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT  238 (392)
Q Consensus       164 ~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKp  238 (392)
                      ..|+..+++.++|++...++..+.. .+..    .+...+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus        79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp  158 (459)
T cd07089          79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP  158 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence            6799999999999999888775544 2221    2456789999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC
Q 016240          239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS  318 (392)
Q Consensus       239 s~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~  318 (392)
                      |+.+|.++..++++|.++|+|+|++|+|+|++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus       159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n  237 (459)
T cd07089         159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS  237 (459)
T ss_pred             CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence            999999999999999999999999999999777788999999999999999999999999999987 8999999999999


Q ss_pred             cEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       319 ~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++++||+|+
T Consensus       238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~  310 (459)
T cd07089         238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLIS  310 (459)
T ss_pred             eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999987

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.6e-64  Score=510.12  Aligned_cols=303  Identities=31%  Similarity=0.428  Sum_probs=283.9

Q ss_pred             eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      +++||.||+++++++.++.+|++++++.|++||+  . |+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   79 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA   79 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            5789999999999999999999999999999998  7 567999999999999999999999999999999999999987


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEe
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK  237 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlK  237 (392)
                      . .|+..+++.+++++.....+.+...+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        80 ~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK  158 (455)
T cd07148          80 K-VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK  158 (455)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence            6 5999999999999998887765543321     234568899999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC
Q 016240          238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK  317 (392)
Q Consensus       238 ps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~  317 (392)
                      ||+.+|+++..++++|.++|+|+|++|+|++++ +.++.|+.|++||.|.||||+++|+.|++.++.  .+|+++|+|||
T Consensus       159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~  235 (455)
T cd07148         159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGA  235 (455)
T ss_pred             CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCCh-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCC
Confidence            999999999999999999999999999999854 578999999999999999999999999999875  48999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       318 ~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++|||+++
T Consensus       236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  310 (455)
T cd07148         236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRP  310 (455)
T ss_pred             CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999973

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=1.9e-64  Score=511.54  Aligned_cols=303  Identities=48%  Similarity=0.775  Sum_probs=287.5

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA  163 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  163 (392)
                      ++||+||+++++++.++.+|++++++.|++|++  .|. +++.++|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~   78 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR   78 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence            479999999999999999999999999999999  876 99999999999999999999999999999999999999976


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                       .|+..+++.+++++...+++.+...+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (454)
T cd07109          79 -ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP  157 (454)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence             5999999999999998888776655544456788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      +++..++++|.++|+|+|++|+|++++.+.++.|+.|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~  236 (454)
T cd07109         158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF  236 (454)
T ss_pred             HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence            9999999999999999999999999777788999999999999999999999999999887 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.| .+++||++++
T Consensus       237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~  304 (454)
T cd07109         237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISA  304 (454)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCH
Confidence            9999999999999999999999999999999999999999999999999999999986 6899999973

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=2.7e-64  Score=510.53  Aligned_cols=303  Identities=42%  Similarity=0.680  Sum_probs=287.3

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.+|++++++.|+++|+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++. 
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   77 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999875 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      .|+..+++.+++++.+...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~  157 (456)
T cd07107          78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence            69999999999999888777666555444556788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..+++++.++ +|+|+||+|++++.+.++.|++|++++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~  235 (456)
T cd07107         158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP  235 (456)
T ss_pred             HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence            999999999995 99999999999777788999999999999999999999999999887 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHH-HhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          325 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       325 dADl~~a~~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||||++
T Consensus       236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~  304 (456)
T cd07107         236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSR  304 (456)
T ss_pred             CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCH
Confidence            999999999999995 99999999999999999999999999999999999999999999999999873

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=2.4e-64  Score=511.21  Aligned_cols=302  Identities=44%  Similarity=0.738  Sum_probs=288.0

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.+|++++++.|+++++  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++. 
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-   77 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999998875 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      .|+..+++.+++++.+.+.+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~  157 (457)
T cd07090          78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL  157 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence            49999999999999988887665554444667788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..+.++|.++|+|+|++|+|++++ +.++.|..|++++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~  235 (457)
T cd07090         158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD  235 (457)
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence            99999999999999999999999854 588999999999999999999999999999987 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+|+
T Consensus       236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  302 (457)
T cd07090         236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALIS  302 (457)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999987

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=5.4e-64  Score=508.63  Aligned_cols=306  Identities=50%  Similarity=0.810  Sum_probs=289.1

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||+||++|++++.++.++++++++.|++|++.+.|+.+|.++|.++|++++++|.+++++|++++++|+|||+.++. 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-   79 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence            4799999999999999999999999999999974469999999999999999999999999999999999999999876 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                      .|+..+++.+++++.+.+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p  159 (457)
T cd07114          80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence            4999999999999988887766544433 455678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      +++..|+++|.++|+|+|+||+|++++.+.+..|..|++++.|.||||+++|+.|++.+++ +++|+++|+||+||+||+
T Consensus       160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  238 (457)
T cd07114         160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF  238 (457)
T ss_pred             HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence            9999999999999999999999999777788999999999999999999999999999987 889999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|+|+++++|||+++
T Consensus       239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  307 (457)
T cd07114         239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATE  307 (457)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999873

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=4.3e-64  Score=515.68  Aligned_cols=322  Identities=37%  Similarity=0.540  Sum_probs=298.6

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      -+....+|.|.|-  .++++++++||+||+++++++.++.+|++++++.|++|++  .|++++.++|.++|+++++.|++
T Consensus        16 ~~~~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~   91 (524)
T PRK09407         16 FERLRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLE   91 (524)
T ss_pred             HHHHHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHH
Confidence            3445677777764  4788999999999999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-C--CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      +.++|++++++|+|||+.++. .|+..+++.+++++..+++..+.... .  ......+..++|+|||++|+|||||++.
T Consensus        92 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~  170 (524)
T PRK09407         92 NREELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTL  170 (524)
T ss_pred             hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHH
Confidence            999999999999999999875 59999999999999988776543321 1  1234678899999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|  +|.|.||||+++|+.|+
T Consensus       171 ~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~  248 (524)
T PRK09407        171 AVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLA  248 (524)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999777788889876  78999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       249 ~~aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~  327 (524)
T PRK09407        249 EQAGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAG  327 (524)
T ss_pred             HHHHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      .++++++||||++
T Consensus       328 ~~~~~~~Gpli~~  340 (524)
T PRK09407        328 YDYSADMGSLISE  340 (524)
T ss_pred             CCcCCccCCCCCH
Confidence            9999999999973

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=5.1e-64  Score=542.75  Aligned_cols=321  Identities=36%  Similarity=0.521  Sum_probs=302.1

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCC-EEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGD-VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge-~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      .+..+.+|||      ++++++++||.|++ +|++++.++.+++++|++.|++||+  .|+.+++++|.++|+++++.|+
T Consensus       550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~  621 (1038)
T PRK11904        550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLE  621 (1038)
T ss_pred             CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence            3455778888      46789999999988 9999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc--cCCCCCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      +++++|+.++++|+|||+.++. .|+..+++.++||+..+.++.+.  ..+...+..++..++|+|||++|+|||||+..
T Consensus       622 ~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai  700 (1038)
T PRK11904        622 ANRAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAI  700 (1038)
T ss_pred             HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHH
Confidence            9999999999999999999975 59999999999999998887643  34445577889999999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      +++++++||++||+||+|||+++|+++..++++|.++|+|+|+||+|+|++.+++..|..||+|++|+||||+++|+.|.
T Consensus       701 ~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~  780 (1038)
T PRK11904        701 FLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIIN  780 (1038)
T ss_pred             HHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHhhhC--CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          300 QLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       300 ~~aa~~--~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      +.++.+  .++|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|
T Consensus       781 ~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vG  860 (1038)
T PRK11904        781 RTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVG  860 (1038)
T ss_pred             HHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence            998863  268999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+|+++++||+|++
T Consensus       861 dp~d~~t~~GPvI~~  875 (1038)
T PRK11904        861 DPRLLSTDVGPVIDA  875 (1038)
T ss_pred             CcccccCCccCCCCH
Confidence            999999999999983

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=2.8e-63  Score=502.41  Aligned_cols=309  Identities=26%  Similarity=0.320  Sum_probs=282.7

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW--PRMTAYER----SKIILRFADLLE  141 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W--~~~~~~~R----~~~L~~~a~~l~  141 (392)
                      +||||+|+..  +++++++||.||+++++++.++.+|+++++++|++||+  .|  ..++..+|    .++|.++++.|+
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~   76 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR   76 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence            4799999863  57899999999999999999999999999999999999  77  66789999    899999999999


Q ss_pred             hc--HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC--CC-CCCCeeEEEecccceEEEEcCCccc
Q 016240          142 RH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVAGQIIPWNFP  216 (392)
Q Consensus       142 ~~--~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P  216 (392)
                      ++  .++|++++++|+|||+.++. .|+..+++.++||++...+..+...  +. ..+...+++++|+|||++|+|||||
T Consensus        77 ~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP  155 (489)
T cd07126          77 KPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP  155 (489)
T ss_pred             cCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence            98  59999999999999999876 5999999999999998877655442  21 1245678999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHH
Q 016240          217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK  296 (392)
Q Consensus       217 ~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~  296 (392)
                      +...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+ +..+..|+++|+|.||||+++|+
T Consensus       156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr  234 (489)
T cd07126         156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE  234 (489)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999999999999999999999999999996655 45578899999999999999999


Q ss_pred             HHHHHhhhCCCccEEEecCCCCcEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcc-hHHHHHHHHHHHhcC
Q 016240          297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR  374 (392)
Q Consensus       297 ~i~~~aa~~~~~~v~lelgG~~~~iV~~dA-Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~  374 (392)
                      .|...++    +++.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++
T Consensus       235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~  310 (489)
T cd07126         235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR  310 (489)
T ss_pred             HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence            9988775    4799999999999999999 999999999999999999999999999999995 689999999999999


Q ss_pred             ccCCCCCCCCccccCCC
Q 016240          375 VVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       375 ~vG~p~~~~~~~Gpli~  391 (392)
                      ++|+     +++||+|+
T Consensus       311 ~~g~-----~~~Gpli~  322 (489)
T cd07126         311 KLED-----LTIGPVLT  322 (489)
T ss_pred             ccCC-----CcCCCCcC
Confidence            9885     58999986

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=7e-64  Score=546.37  Aligned_cols=312  Identities=31%  Similarity=0.479  Sum_probs=292.8

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      .+....+|+|+.   .++..++++||.| ++++++++.++.+|+++|++.|+++|+  .|+.+|..+|+++|++++++|+
T Consensus       644 ~~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle  718 (1318)
T PRK11809        644 KWQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLME  718 (1318)
T ss_pred             CcccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            445567778843   3578899999998 899999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      ++.++|+.+++.|+|||+.++. .|+..++++++||+..+.....           ...++|+|||++|+|||||+..++
T Consensus       719 ~~~~eL~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~  786 (1318)
T PRK11809        719 AQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFT  786 (1318)
T ss_pred             HCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHH
Confidence            9999999999999999999875 5999999999999988764311           246899999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+||++++|+++..++++|.++|+|+|+||+|+|++.+++..|..||+|++|+||||+++|+.|++.
T Consensus       787 g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~  866 (1318)
T PRK11809        787 GQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN  866 (1318)
T ss_pred             HHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             hhhCCC------ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          302 AAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       302 aa~~~~------~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      +++ ++      +|+++|+||+|++||++|||+|.|++.+++|+|.++||.|++.+++|||+++||+|+++|++++++++
T Consensus       867 aA~-~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~  945 (1318)
T PRK11809        867 LAG-RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECR  945 (1318)
T ss_pred             Hhh-hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence            886 43      79999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCCC
Q 016240          376 VGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~~  392 (392)
                      +|||++.++++||||++
T Consensus       946 vGdP~~~~tdvGPvId~  962 (1318)
T PRK11809        946 MGNPDRLSTDIGPVIDA  962 (1318)
T ss_pred             CCCcccccCCcCCCCCH
Confidence            99999999999999983

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=2.3e-63  Score=503.54  Aligned_cols=301  Identities=38%  Similarity=0.562  Sum_probs=283.0

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      .||+||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|++++++|+++.++|++++++|+|||+.++. .
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~   77 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-E   77 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-H
Confidence            38999999999999999999999999999999  99999999999999999999999999999999999999999875 5


Q ss_pred             chhHHHHHHHHHHHHHHhhcCccC-CC--CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCC
Q 016240          166 EVPMTTRLFRYYAGWADKIQGLTA-PA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT  242 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~  242 (392)
                      |+..+++.+++++..+.+..+... +.  ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~  157 (454)
T cd07101          78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            999999999999998877654332 11  123467889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240          243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV  322 (392)
Q Consensus       243 p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV  322 (392)
                      |+++..+.+++.++|+|+|++|+++|++.+.+..|.+|  ++.|.||||+++|+.|++.+++ +++|+++|+|||||+||
T Consensus       158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV  234 (454)
T cd07101         158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV  234 (454)
T ss_pred             hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence            99999999999999999999999999877888999986  6889999999999999999987 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++
T Consensus       235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~  304 (454)
T cd07101         235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQ  304 (454)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999973

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=3.4e-63  Score=501.33  Aligned_cols=300  Identities=43%  Similarity=0.684  Sum_probs=281.8

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.+|++++++.|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   78 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF   78 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence            479999999999999999999999999999999  999999999999999999999999999999999999999988764


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                       |+..+++.+++++....  .+...+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+
T Consensus        79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  155 (446)
T cd07106          79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL  155 (446)
T ss_pred             -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence             99999999999988753  233333233556789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..++++|.++ +|+|++|+++++ .+.+..|..|+++|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus       156 ~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~  232 (446)
T cd07106         156 CTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP  232 (446)
T ss_pred             HHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence            999999999995 999999999984 4688999999999999999999999999999887 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||+|+++++||+|++
T Consensus       233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  300 (446)
T cd07106         233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNK  300 (446)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999973

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=4.3e-63  Score=501.69  Aligned_cols=301  Identities=37%  Similarity=0.563  Sum_probs=285.9

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      +||.||+++++++.++.+|++++++.|++|++  .|++++..+|.++|++++++|+++.++|++++++|+|||..++. .
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~   77 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G   77 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence            58999999999999999999999999999999  99999999999999999999999999999999999999999875 5


Q ss_pred             chhHHHHHHHHHHHHHHhhcCcc-CCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          166 EVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      |+..+++.+++++...++..+.. .+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  157 (452)
T cd07102          78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL  157 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            99999999999999887765443 33344566788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..|.++|.++|+|+|++|+|++++ +.+..|+.|++||.|.||||+++|+.|++++++ +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~  235 (452)
T cd07102         158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP  235 (452)
T ss_pred             HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence            99999999999999999999999966 788999999999999999999999999999886 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||+|+
T Consensus       236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~  302 (452)
T cd07102         236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVS  302 (452)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999987

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=6.2e-63  Score=500.25  Aligned_cols=304  Identities=46%  Similarity=0.718  Sum_probs=286.1

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||++|++++.++.+|++++++.|+++++  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~   78 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD   78 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence            479999999999999999999999999999999  999999999999999999999999999999999999999977666


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                      .|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  158 (450)
T cd07092          79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP  158 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            699999999999998877765543221 1234567899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      .++..+.++|.+ |+|+|++|++++++.+.++.|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus       159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~  236 (450)
T cd07092         159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF  236 (450)
T ss_pred             HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence            999999999999 999999999998777788999999999999999999999999999987 889999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||++++
T Consensus       237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (450)
T cd07092         237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSA  305 (450)
T ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999873

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=6.5e-63  Score=500.35  Aligned_cols=303  Identities=38%  Similarity=0.591  Sum_probs=287.6

Q ss_pred             eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 016240           84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA  163 (392)
Q Consensus        84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  163 (392)
                      +++||+||+++++++.++.+|++++++.|++|++  .|++++..+|.++|.++++.|+++.++|++++++|+|||..++.
T Consensus         2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~   79 (453)
T cd07094           2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR   79 (453)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence            5789999999999999999999999999999999  99999999999999999999999999999999999999999986


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEec
Q 016240          164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT  238 (392)
Q Consensus       164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKp  238 (392)
                       .|+..+++.+++++...+++.++..+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        80 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp  158 (453)
T cd07094          80 -VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP  158 (453)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence             4999999999999998888766554433     2455678899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC
Q 016240          239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS  318 (392)
Q Consensus       239 s~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~  318 (392)
                      |+.+|+++..++++|.++|+|+|++++++|++.++++.|..|+++|.|.||||+++|+.|++.+   +++|+++|+||||
T Consensus       159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~  235 (453)
T cd07094         159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA  235 (453)
T ss_pred             CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence            9999999999999999999999999999997777899999999999999999999999999987   5789999999999


Q ss_pred             cEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       319 ~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++
T Consensus       236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~  309 (453)
T cd07094         236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISE  309 (453)
T ss_pred             ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999873

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=7.9e-63  Score=500.13  Aligned_cols=303  Identities=46%  Similarity=0.775  Sum_probs=286.1

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh-hhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSA  163 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~  163 (392)
                      ++||.||+++++++.++.+|+++++++|+++|+  .|++++.++|.++|+++++.|+++.++|++++++|+|||. .++.
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~   78 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR   78 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence            479999999999999999999999999999999  9999999999999999999999999999999999999997 5765


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                       .|+..+++.+++++.+...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  157 (457)
T cd07108          79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP  157 (457)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence             6999999999999998877766655543455667889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      .++..+++++.++ +|+|++|+|+|++.+.++.|..|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~  235 (457)
T cd07108         158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF  235 (457)
T ss_pred             HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence            9999999999986 99999999999777788999999999999999999999999999987 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHH-HHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+|++
T Consensus       236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~  305 (457)
T cd07108         236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISE  305 (457)
T ss_pred             CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCH
Confidence            999999999999999 599999999999999999999999999999999999999999999999999873

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=9.2e-63  Score=499.25  Aligned_cols=304  Identities=43%  Similarity=0.727  Sum_probs=288.8

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      ++||.||+++++++.++.++++++++.|+++++  .|++++.++|.++|+++++.|+++.++|++++++|+|||..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   77 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-   77 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999976 


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCCh
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP  243 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  243 (392)
                      .|+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  157 (451)
T cd07103          78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence            4999999999999988877766554433 355678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEc
Q 016240          244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC  323 (392)
Q Consensus       244 ~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~  323 (392)
                      .++..++++|.++|+|+|++|++++++.+.++.|..|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  236 (451)
T cd07103         158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF  236 (451)
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence            9999999999999999999999999777788999999999999999999999999999987 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       324 ~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++
T Consensus       237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~  305 (451)
T cd07103         237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINE  305 (451)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999873

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=7.9e-63  Score=499.63  Aligned_cols=303  Identities=36%  Similarity=0.540  Sum_probs=283.4

Q ss_pred             eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      ++++||.||+++++++.++.+++++++++|++|++  .|++++.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA   78 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            46899999999999999999999999999999999  9999999999999999999999999999999999999999987


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEe
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK  237 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlK  237 (392)
                      . .|+..+++.+++++....+..++..+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK  157 (452)
T cd07147          79 R-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK  157 (452)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence            6 4999999999999988776654433211     244567889999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC
Q 016240          238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK  317 (392)
Q Consensus       238 ps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~  317 (392)
                      ||+.+|.++..++++|.++|+|+|+||+++++ .+.+..|..|+++|.|.||||+++|+.|++.++.   +|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~  233 (452)
T cd07147         158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN  233 (452)
T ss_pred             CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence            99999999999999999999999999999985 4578899999999999999999999999998764   6999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       318 ~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++|||+++
T Consensus       234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~  308 (452)
T cd07147         234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISE  308 (452)
T ss_pred             CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999873

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=8.8e-63  Score=499.81  Aligned_cols=305  Identities=47%  Similarity=0.833  Sum_probs=289.4

Q ss_pred             eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhh
Q 016240           85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ  164 (392)
Q Consensus        85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  164 (392)
                      .+||.||+++++++.++.++++++++.|++|++  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~   78 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART   78 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            369999999999999999999999999999999  999999999999999999999999999999999999999988766


Q ss_pred             hchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChH
Q 016240          165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL  244 (392)
Q Consensus       165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~  244 (392)
                      .|+..+++.+++++....+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~  158 (455)
T cd07093          79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL  158 (455)
T ss_pred             HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence            79999999999999887775544444444666788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       245 t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      ++..+.++|.++|+|+|+||+++|++.+.+..|..|+++|.|.||||+.+|+.|++++++ +++|+++|+|||||+||++
T Consensus       159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~  237 (455)
T cd07093         159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA  237 (455)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence            999999999999999999999999777788999999999999999999999999999997 8899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++
T Consensus       238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (455)
T cd07093         238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISK  305 (455)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999873

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=1.5e-62  Score=499.16  Aligned_cols=303  Identities=31%  Similarity=0.512  Sum_probs=281.4

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      +||.||+++++++.++.+|++++++.|++|++  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++...
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~   78 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG   78 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            59999999999999999999999999999999  9999999999999999999999999999999999999999998777


Q ss_pred             chhHHHHHHHHHHHHHHhhcCc-cCCCC---CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCC
Q 016240          166 EVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ  241 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  241 (392)
                      |+..+++.+++++...+..... ..+..   .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus        79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  158 (465)
T cd07098          79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ  158 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            9999999999999877664322 22211   1344678899999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHH----HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC
Q 016240          242 TPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK  317 (392)
Q Consensus       242 ~p~t~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~  317 (392)
                      +|+++..+++++    .++|+|+|+||+|+|++ +.+..|..|++|+.|.||||+++|+.|.+.+++ +++|+++|+|||
T Consensus       159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~  236 (465)
T cd07098         159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK  236 (465)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence            999999766654    68999999999999955 788999999999999999999999999999987 899999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       318 ~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|||+++
T Consensus       237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~  311 (465)
T cd07098         237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISP  311 (465)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999974

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.4e-62  Score=496.44  Aligned_cols=297  Identities=40%  Similarity=0.614  Sum_probs=280.5

Q ss_pred             CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHH
Q 016240           91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT  170 (392)
Q Consensus        91 ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~  170 (392)
                      |+++++++.++.++++++++.|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~   77 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAA   77 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence            689999999999999999999999999  99999999999999999999999999999999999999998876 499999


Q ss_pred             HHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHH-HHH
Q 016240          171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYV  249 (392)
Q Consensus       171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~-~~l  249 (392)
                      ++.+++++....+..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ ..+
T Consensus        78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l  157 (443)
T cd07152          78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI  157 (443)
T ss_pred             HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence            9999999987766655554444456678899999999999999999999999999999999999999999999996 789


Q ss_pred             HHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHH
Q 016240          250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD  329 (392)
Q Consensus       250 ~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~  329 (392)
                      .++|.++|+|+|++|+|+| +.+.+..|..|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|
T Consensus       158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~  235 (443)
T cd07152         158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD  235 (443)
T ss_pred             HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence            9999999999999999998 55688999999999999999999999999999987 899999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       330 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      .|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++
T Consensus       236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  298 (443)
T cd07152         236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA  298 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999873

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=2e-62  Score=496.87  Aligned_cols=301  Identities=39%  Similarity=0.584  Sum_probs=283.0

Q ss_pred             eCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh
Q 016240           86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT  165 (392)
Q Consensus        86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  165 (392)
                      +||.||+++++++.++.+|++++++.|+++|+  .|++++.++|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~   77 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L   77 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence            58999999999999999999999999999999  99999999999999999999999999999999999999998755 5


Q ss_pred             chhHHHHHHHHHHHHHHhhcCcc-CCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCC
Q 016240          166 EVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ  241 (392)
Q Consensus       166 ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  241 (392)
                      |+..+++.++|++..+.++.+.. .+.   ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.
T Consensus        78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~  157 (453)
T cd07099          78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV  157 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence            99999999999999887765432 221   13556788999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       242 ~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      +|+++..|+++|.++|+|+|++|+|+|++ +.+..|..| .+|.|+||||+++|+.|++.+++ +++|+++|+|||||+|
T Consensus       158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i  234 (453)
T cd07099         158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI  234 (453)
T ss_pred             chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence            99999999999999999999999999965 678888887 59999999999999999999987 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+|+++++||+|++
T Consensus       235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~  305 (453)
T cd07099         235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTA  305 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999973

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=3.6e-62  Score=493.70  Aligned_cols=300  Identities=39%  Similarity=0.582  Sum_probs=280.5

Q ss_pred             eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 016240           84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA  163 (392)
Q Consensus        84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  163 (392)
                      +++||+||+++++++.++.+++++++++|++     .|++++.++|.++|+++++.|++++++|++++++|+|||+.++.
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~-----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   76 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAAS-----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR   76 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            5789999999999999999999999999975     47789999999999999999999999999999999999999976


Q ss_pred             hhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEec
Q 016240          164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT  238 (392)
Q Consensus       164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKp  238 (392)
                       .|+..+++.++|++.......++..+..     .+...+..++|+|||++|+|||||++..++++++||++||+||+||
T Consensus        77 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp  155 (451)
T cd07146          77 -YEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP  155 (451)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence             5999999999999988777655443321     2445678899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC
Q 016240          239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS  318 (392)
Q Consensus       239 s~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~  318 (392)
                      |+.+|+++..+.++|.++|+|+|++|++++++.+.+..|.+|+++|.|.||||+.+|+.|.+.++   ++|+++|+||||
T Consensus       156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~  232 (451)
T cd07146         156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND  232 (451)
T ss_pred             CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence            99999999999999999999999999999977788999999999999999999999999998774   579999999999


Q ss_pred             cEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       319 ~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++|||+++
T Consensus       233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~  306 (451)
T cd07146         233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDE  306 (451)
T ss_pred             eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999873

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=3.7e-62  Score=493.21  Aligned_cols=286  Identities=27%  Similarity=0.355  Sum_probs=264.8

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHH
Q 016240          100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG  179 (392)
Q Consensus       100 ~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~  179 (392)
                      -...|+++++++|+++|+  .|++++..+|.++|+++++.|++|.|+|+++++.|+|||+.++...|+..+++.++|+++
T Consensus         7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~   84 (484)
T PLN02174          7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK   84 (484)
T ss_pred             cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999  999999999999999999999999999999999999999988776699999999999999


Q ss_pred             HHHhhcC----ccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016240          180 WADKIQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE  255 (392)
Q Consensus       180 ~~~~~~~----~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~  255 (392)
                      ..++..+    ...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~  164 (484)
T PLN02174         85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ  164 (484)
T ss_pred             HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence            8887655    222222234568899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHH
Q 016240          256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA  335 (392)
Q Consensus       256 aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i  335 (392)
                       ++|+|+||+|+|. .+.+..|.. +++|+|+||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+
T Consensus       165 -~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i  240 (484)
T PLN02174        165 -YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI  240 (484)
T ss_pred             -hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence             7999999999984 445667775 899999999999999999999997 899999999999999999999999999999


Q ss_pred             HHHHH-hccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          336 HYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       336 ~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++++| .|+||.|++++|||||+++||+|+++|+++++++++|||++ ++++||||++
T Consensus       241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~  297 (484)
T PLN02174        241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNS  297 (484)
T ss_pred             HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCH
Confidence            99999 69999999999999999999999999999999999999988 8999999973

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=5e-62  Score=497.04  Aligned_cols=300  Identities=21%  Similarity=0.232  Sum_probs=272.8

Q ss_pred             eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 016240           84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA  163 (392)
Q Consensus        84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  163 (392)
                      .=+||+|++++++++.++.   ++++++|++||+  .|+++++.+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus        68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~  142 (551)
T TIGR02288        68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF  142 (551)
T ss_pred             cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence            3458999999999999885   899999999999  99999999999999999999999999999999999999998864


Q ss_pred             h-h---chhHHHHHHHHHHHHHHhhcCccC---CCC-C---CCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCC
Q 016240          164 Q-T---EVPMTTRLFRYYAGWADKIQGLTA---PAD-G---PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN  232 (392)
Q Consensus       164 ~-~---ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN  232 (392)
                      . +   ++.+.++.++|++.....+.+...   +.. .   ....+..++|+|||++|+|||||+++.++++++||++||
T Consensus       143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN  222 (551)
T TIGR02288       143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN  222 (551)
T ss_pred             hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence            2 2   677889999999998887766543   211 1   112234789999999999999999999999999999999


Q ss_pred             EEEEecCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC
Q 016240          233 TIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL  307 (392)
Q Consensus       233 ~VIlKps~~~p~t~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  307 (392)
                      +||+|||+.+|+++.    .+.++|.++|+|+|+||+|++. +.++++.|..||+|+.|.||||+++|+.|++.++.   
T Consensus       223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~---  299 (551)
T TIGR02288       223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ---  299 (551)
T ss_pred             eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---
Confidence            999999999999765    5779999999999999999985 67789999999999999999999999999998763   


Q ss_pred             ccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCc---------chHHHHHHHHHHHhcCccCC
Q 016240          308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       308 ~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~L~~~~~~~~vG~  378 (392)
                      +++++|+|||||+||++|||+|.+++.+++++|.|+||.|++++|||||++         +||+|+++|+++++++ +||
T Consensus       300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd  378 (551)
T TIGR02288       300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD  378 (551)
T ss_pred             CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence            799999999999999999999999999999999999999999999999999         7999999999999999 999


Q ss_pred             CCCCCCccccCCCC
Q 016240          379 PFKGGIQQGPQVNQ  392 (392)
Q Consensus       379 p~~~~~~~Gpli~~  392 (392)
                      |.++++++||||++
T Consensus       379 p~~~~~~~Gplis~  392 (551)
T TIGR02288       379 PARATAVLGAIQSP  392 (551)
T ss_pred             cccccccccCcCCH
Confidence            99999999999973

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.6e-61  Score=490.52  Aligned_cols=304  Identities=43%  Similarity=0.655  Sum_probs=285.2

Q ss_pred             eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 016240           83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS  162 (392)
Q Consensus        83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  162 (392)
                      |+++||.||+++++++.++.++++++++.|++|+.  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA   78 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence            46889999999999999999999999999999999  9999999999999999999999999999999999999999998


Q ss_pred             hhhchhHHHHHHHHHHHHHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEe
Q 016240          163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK  237 (392)
Q Consensus       163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlK  237 (392)
                      . .|+..+++.+++++.....+.++..+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K  157 (453)
T cd07149          79 R-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK  157 (453)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence            6 5999999999999988777655443321     133457889999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC
Q 016240          238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK  317 (392)
Q Consensus       238 ps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~  317 (392)
                      ||+.+|.++..+.++|.++|+|+|+++++++++...+..|..|+++|.|.||||+++|+.|++.++   ++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk  234 (453)
T cd07149         158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN  234 (453)
T ss_pred             CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence            999999999999999999999999999999977777899999999999999999999999998863   68999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       318 ~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||+||++|+|++.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++.+++|+|.++++++|||+++
T Consensus       235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~  309 (453)
T cd07149         235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISE  309 (453)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999873

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=8.8e-62  Score=530.85  Aligned_cols=313  Identities=35%  Similarity=0.536  Sum_probs=293.7

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      .+..+.+|+|+..   .+..++++||.| ++++++++.++.+++++|++.|+++|+  .|+.+++++|.++|+++++.|+
T Consensus       552 ~~~~~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~  626 (1208)
T PRK11905        552 TWHAAPLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLME  626 (1208)
T ss_pred             Ceeecceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence            3445677777654   366799999999 999999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +++++|+.++++|+||++.++. .|+..++++++||+..++...+           ...++|+|||++|+|||||+..++
T Consensus       627 ~~~~eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~  694 (1208)
T PRK11905        627 AHMPELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFT  694 (1208)
T ss_pred             HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHH
Confidence            9999999999999999999975 5999999999999998776532           135789999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+++|+++..++++|.++|+|+|+||+|+|++.+++..|..||+|++|+||||+++|+.|++.
T Consensus       695 g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~  774 (1208)
T PRK11905        695 GQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRT  774 (1208)
T ss_pred             HHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             hhhC--CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          302 AAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       302 aa~~--~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      ++++  +.+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|++++++|||+++||+|+++|+++++++++|||
T Consensus       775 ~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP  854 (1208)
T PRK11905        775 LAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDP  854 (1208)
T ss_pred             HHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCc
Confidence            8873  25899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      .+.++++||||++
T Consensus       855 ~d~~t~~GPvId~  867 (1208)
T PRK11905        855 WRLSTDVGPVIDA  867 (1208)
T ss_pred             hhccCCccCccCH
Confidence            9999999999984

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=4.8e-61  Score=483.04  Aligned_cols=282  Identities=37%  Similarity=0.562  Sum_probs=265.6

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI  184 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~  184 (392)
                      ++++++.|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++..+++.
T Consensus         1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~   77 (429)
T cd07100           1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAF   77 (429)
T ss_pred             CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence            4689999999999  99999999999999999999999999999999999999999986 59999999999999998887


Q ss_pred             cC-ccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeE
Q 016240          185 QG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL  263 (392)
Q Consensus       185 ~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v  263 (392)
                      .. ...+.. +...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus        78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv  156 (429)
T cd07100          78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF  156 (429)
T ss_pred             cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence            43 333332 4557889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhcc
Q 016240          264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ  343 (392)
Q Consensus       264 ~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~  343 (392)
                      |+|++++ +.+..|+.|++|+.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus       157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~  234 (429)
T cd07100         157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA  234 (429)
T ss_pred             EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence            9999955 467889999999999999999999999999987 89999999999999999999999999999999999999


Q ss_pred             CCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       344 GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  283 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARK  283 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCH
Confidence            9999999999999999999999999999999999999999999999873

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=6.4e-61  Score=481.75  Aligned_cols=285  Identities=36%  Similarity=0.522  Sum_probs=267.6

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK  183 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~  183 (392)
                      |++++++.|+++|+  .|+++|.++|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+++.+++++.....
T Consensus         1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~   77 (431)
T cd07095           1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHE   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999999976 5999999999999988777


Q ss_pred             hcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeE
Q 016240          184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL  263 (392)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v  263 (392)
                      ..+.......+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~  157 (431)
T cd07095          78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL  157 (431)
T ss_pred             hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence            66544332335677889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhcc
Q 016240          264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ  343 (392)
Q Consensus       264 ~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~  343 (392)
                      |+|+| +.+.+..|.+|+++|.|.||||+++|+.|++.++.+.++++++|+|||||+||++|||+|.|++.+++++|+|+
T Consensus       158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~  236 (431)
T cd07095         158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA  236 (431)
T ss_pred             eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence            99998 45678999999999999999999999999998876467999999999999999999999999999999999999


Q ss_pred             CCcccCCcEEEEeCc-chHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          344 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       344 GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||.|++++|||||++ +||+|+++|+++++++++|+|+++++++||++++
T Consensus       237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  286 (431)
T cd07095         237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIA  286 (431)
T ss_pred             CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCH
Confidence            999999999999999 9999999999999999999999999999999873

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=4.4e-60  Score=483.72  Aligned_cols=307  Identities=21%  Similarity=0.215  Sum_probs=279.3

Q ss_pred             CCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcC
Q 016240           77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG  156 (392)
Q Consensus        77 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G  156 (392)
                      ..+|+..+++||+|++.+++++.+   |+++++++|++|++  .|+++++.+|.++|++++++|++++++|++++++|+|
T Consensus        61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G  135 (549)
T cd07127          61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG  135 (549)
T ss_pred             CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence            346788999999999999999976   99999999999999  9999999999999999999999999999999999999


Q ss_pred             CChhhhhhh----chhHHHHHHHHHHHHHHhhcCccCCCC-------CCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          157 KPFEQSAQT----EVPMTTRLFRYYAGWADKIQGLTAPAD-------GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       157 k~~~~a~~~----ev~~~~~~l~~~a~~~~~~~~~~~~~~-------~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      |++.++...    |++++++.++|++.+...+.+...+..       .....+..++|+||+++|+|||||+++.+.+++
T Consensus       136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~  215 (549)
T cd07127         136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF  215 (549)
T ss_pred             CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence            999876532    799999999999998887765433210       111224578999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          226 PALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      +||++||+||+|||+.+|+++.    .+.++|.++|+|+|+||+|+++ +.++++.|..||+|+.|.||||+.+|+.|++
T Consensus       216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~  295 (549)
T cd07127         216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA  295 (549)
T ss_pred             HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence            9999999999999999999864    4668999999999999999985 4678999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCc---------chHHHHHHHHHHH
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALA  371 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~L~~~~  371 (392)
                      .++.   +|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++         +||+|+++|++++
T Consensus       296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~  372 (549)
T cd07127         296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI  372 (549)
T ss_pred             Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence            9864   799999999999999999999999999999999999999999999999999         8999999999999


Q ss_pred             hcCccCCCCCCCCccccCCCC
Q 016240          372 MKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       372 ~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++ +|||.+..+++||||++
T Consensus       373 ~~l-~Gdp~~~~~~~Gpli~~  392 (549)
T cd07127         373 DGL-LADPARAAALLGAIQSP  392 (549)
T ss_pred             HHh-cCCccccccccCCcCCH
Confidence            999 99999999999999973

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=5e-60  Score=475.42  Aligned_cols=286  Identities=30%  Similarity=0.374  Sum_probs=265.2

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHH
Q 016240          100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG  179 (392)
Q Consensus       100 ~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~  179 (392)
                      .+.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++.
T Consensus         2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~   79 (436)
T cd07135           2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK   79 (436)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            478999999999999999  999999999999999999999999999999999999999988765699999999999999


Q ss_pred             HHHhhcCccCCCC-----CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240          180 WADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH  254 (392)
Q Consensus       180 ~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~  254 (392)
                      ..+++.....+..     .+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~  159 (436)
T cd07135          80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP  159 (436)
T ss_pred             HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence            8877643322211     13456889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL  334 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~  334 (392)
                      + |+|+|++|+++|++.+. ..|+.|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.
T Consensus       160 ~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~  235 (436)
T cd07135         160 K-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR  235 (436)
T ss_pred             H-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence            9 79999999999866555 4588899 9999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       335 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++|+|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||+|++
T Consensus       236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~  292 (436)
T cd07135         236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNP  292 (436)
T ss_pred             HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999 999999999873

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=3.1e-59  Score=469.97  Aligned_cols=278  Identities=32%  Similarity=0.421  Sum_probs=258.8

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      +.+++|++||+  .|++++..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++..++.+.+
T Consensus         2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (449)
T cd07136           2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK   79 (449)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            56889999999  9999999999999999999999999999999999999999998766999999999999998877654


Q ss_pred             c-cCCCC---CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 L-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      . ..+..   .+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv  158 (449)
T cd07136          80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY  158 (449)
T ss_pred             CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence            3 22211   2446788999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      +|+|+| +.+.+..|+.|+ ||.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus       159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~  235 (449)
T cd07136         159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN  235 (449)
T ss_pred             EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence            999998 456678888775 9999999999999999999987 8999999999999999999999999999999999999


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||+|+
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~  283 (449)
T cd07136         236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIIN  283 (449)
T ss_pred             cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCC
Confidence            999999999999999999999999999999999999998 899999987

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=3.8e-59  Score=470.32  Aligned_cols=284  Identities=42%  Similarity=0.657  Sum_probs=268.2

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK  183 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~  183 (392)
                      |++++++.|++|++  .|++++..+|.++|+++++.|+++.++|+++++.|+|||+.++. .|+..+++.+++++...++
T Consensus         1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (431)
T cd07104           1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRR   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999998876 4999999999999998877


Q ss_pred             hcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHH-HHHHHHHHHHcCCCCC
Q 016240          184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPG  261 (392)
Q Consensus       184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t-~~~l~~ll~~aGlP~g  261 (392)
                      ..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.++|.++|+|+|
T Consensus        78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g  157 (431)
T cd07104          78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG  157 (431)
T ss_pred             hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence            655544433 45667899999999999999999999999999999999999999999999998 5789999999999999


Q ss_pred             eEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHh
Q 016240          262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF  341 (392)
Q Consensus       262 ~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~  341 (392)
                      ++|++++++.+.+..|..|+++|.|.||||+++|+.|++++++ +++|+++|+|||||+||++|||++.|++.+++++|+
T Consensus       158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~  236 (431)
T cd07104         158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL  236 (431)
T ss_pred             cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            9999999777788999999999999999999999999999987 899999999999999999999999999999999999


Q ss_pred             ccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       342 ~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |+||.|+++++||||++++|+|+++|+++++.+++|||.++++++||+++
T Consensus       237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~  286 (431)
T cd07104         237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLIN  286 (431)
T ss_pred             cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccC
Confidence            99999999999999999999999999999999999999999999999987

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=7.9e-59  Score=470.30  Aligned_cols=287  Identities=26%  Similarity=0.354  Sum_probs=266.0

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240           99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus        99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  178 (392)
                      ++..+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|+++++.|+|||+.++...|+..+++.+++++
T Consensus         2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~   79 (484)
T PLN02203          2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL   79 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4578999999999999999  99999999999999999999999999999999999999999886679999999999999


Q ss_pred             HHHHhhcCcc---CCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240          179 GWADKIQGLT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH  254 (392)
Q Consensus       179 ~~~~~~~~~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~  254 (392)
                      +..+...+..   .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~  159 (484)
T PLN02203         80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP  159 (484)
T ss_pred             HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence            8877765431   221 124467889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC---CCCHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA  331 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~---dADl~~a  331 (392)
                      ++ +|+|+||+|+| +.+.+..|..|+ +|.|+||||+++|+.|++++++ +++|+++|+|||||+||++   |||+|.|
T Consensus       160 ~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a  235 (484)
T PLN02203        160 KY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA  235 (484)
T ss_pred             Hh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence            85 99999999998 677899999994 9999999999999999999987 8999999999999999997   6999999


Q ss_pred             HHHHHHHHHh-ccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          332 AELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       332 ~~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ++.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|||.++ +++|||+++
T Consensus       236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~  296 (484)
T PLN02203        236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNK  296 (484)
T ss_pred             HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCH
Confidence            9999999995 89999999999999999999999999999999999999986 689999973

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=5e-60  Score=458.31  Aligned_cols=334  Identities=33%  Similarity=0.494  Sum_probs=312.1

Q ss_pred             hhhhccccccchhhhhcCCCCCCCCCCCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHh
Q 016240           37 AAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKA  115 (392)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a  115 (392)
                      +++++++++++++.++      ...+.++...+++|+.+.  .|+..+++||.+ .+++++|.+++.+|+++|++.|..+
T Consensus        91 lsne~~la~L~~al~~------~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a  162 (769)
T COG4230          91 LSNEHRLASLSSALLA------SAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAA  162 (769)
T ss_pred             cchHHHHHHHHHHHHh------hhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhh
Confidence            4588899998888655      445677778889998874  688999999998 6788999999999999999999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCC
Q 016240          116 FDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPY  195 (392)
Q Consensus       116 ~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~  195 (392)
                      ++  .|+.+++.+|+.+|++++++++.+..+|..++++|.||+...+. .||.+++++||||+.+.+.-.++        
T Consensus       163 ~p--~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREAVDFlrYYA~~ar~~~g~--------  231 (769)
T COG4230         163 AP--IWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQARDTFGN--------  231 (769)
T ss_pred             Cc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHHhcccCc--------
Confidence            99  99999999999999999999999999999999999999999876 49999999999999987753221        


Q ss_pred             eeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHH
Q 016240          196 HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGA  275 (392)
Q Consensus       196 ~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~  275 (392)
                         ..+.|+|++++|+|||||+.++..+++.||++||+|+-||+++||+.+..-+++++|+|+|++++|+++|++.+++.
T Consensus       232 ---~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa  308 (769)
T COG4230         232 ---LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGA  308 (769)
T ss_pred             ---cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccch
Confidence               44789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCcCEEEeeCChHHHHHHHHHhhhCC--CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEE
Q 016240          276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT  353 (392)
Q Consensus       276 ~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~--~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v  353 (392)
                      .|..++++++|+||||+++++.|.++.+++.  ..|++.|+||.|++||+.+|--|+++..++.|+|...||.|.+.+.+
T Consensus       309 ~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvL  388 (769)
T COG4230         309 ALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVL  388 (769)
T ss_pred             hhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhh
Confidence            9999999999999999999999999999854  47899999999999999999999999999999999999999999999


Q ss_pred             EEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       354 ~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |+++++.|..+++|+-++..+++|+|..-.||+||+|+.
T Consensus       389 clQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIda  427 (769)
T COG4230         389 CLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDA  427 (769)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccH
Confidence            999999999999999999999999999999999999983

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=2.8e-58  Score=463.61  Aligned_cols=280  Identities=41%  Similarity=0.624  Sum_probs=260.8

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK  183 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~  183 (392)
                      |++++++.|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++++++..++
T Consensus         1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (432)
T cd07105           1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQ   77 (432)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999987765 4999999999999998877


Q ss_pred             hcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      ..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv  157 (432)
T cd07105          78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV  157 (432)
T ss_pred             hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence            644444432 3455688999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCC---chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHH
Q 016240          263 LNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL  339 (392)
Q Consensus       263 v~vv~g~---~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~  339 (392)
                      +|+++++   +.+++..|++|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus       158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            9999974   23578999999999999999999999999999987 8999999999999999999999999999999999


Q ss_pred             HhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       340 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |+|+||.|+++++||||+++||+|+++|+++++++++|     ++++||++++
T Consensus       237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~  284 (432)
T cd07105         237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSA  284 (432)
T ss_pred             HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCH
Confidence            99999999999999999999999999999999999998     6899999873

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=7.3e-58  Score=465.03  Aligned_cols=287  Identities=30%  Similarity=0.413  Sum_probs=264.5

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240           99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus        99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  178 (392)
                      ..+.+|++++++.|+++|.  .|+.++.++|.++|+++++.|++|.++|++++++|+|||..++...|+..+++.+++++
T Consensus         3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~   80 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL   80 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3578999999999999999  99999999999999999999999999999999999999999887779999999999999


Q ss_pred             HHHHhhcCcc-CCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240          179 GWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH  254 (392)
Q Consensus       179 ~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~  254 (392)
                      ...++..... ...   ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~  160 (493)
T PTZ00381         81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT  160 (493)
T ss_pred             HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence            8777653322 111   123457889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL  334 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~  334 (392)
                      ++ +|+|++++|+| +.+.+..|..|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.
T Consensus       161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~  236 (493)
T PTZ00381        161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR  236 (493)
T ss_pred             Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence            95 99999999998 667788888887 9999999999999999999987 89999999999999999999999999999


Q ss_pred             HHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       335 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++|.|+||.|+++++||||++++|+|+++|++.++++. |+|.++++++||+|++
T Consensus       237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~  293 (493)
T PTZ00381        237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNE  293 (493)
T ss_pred             HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCH
Confidence            99999999999999999999999999999999999999986 6666789999999973

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=9.2e-58  Score=458.51  Aligned_cols=279  Identities=31%  Similarity=0.412  Sum_probs=256.3

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      ++++.|+++|.  .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus         3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   80 (432)
T cd07137           3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA   80 (432)
T ss_pred             HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            48899999999  9999999999999999999999999999999999999999887656999999999999988766443


Q ss_pred             cc---CCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 LT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      ..   .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv  159 (432)
T cd07137          81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA  159 (432)
T ss_pred             CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence            21   121 12335678999999999999999999999999999999999999999999999999999999994 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHH-h
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-F  341 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~-~  341 (392)
                      +|+|+| +.+.+..|+.| .+|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++| +
T Consensus       160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~  236 (432)
T cd07137         160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC  236 (432)
T ss_pred             EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence            999999 55678888887 69999999999999999999987 89999999999999999999999999999999999 5


Q ss_pred             ccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       342 ~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |+||.|++++|+|||+++||+|+++|+++++++++|||. +++++|||+++
T Consensus       237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~  286 (432)
T cd07137         237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPK-ESKDLSRIVNS  286 (432)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCC-ccCCcCCcCCH
Confidence            999999999999999999999999999999999999994 58999999973

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=2.9e-57  Score=451.32  Aligned_cols=258  Identities=37%  Similarity=0.617  Sum_probs=243.2

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEc
Q 016240          133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQII  211 (392)
Q Consensus       133 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~  211 (392)
                      |+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++.+++...+...+.. .+...+.+++|+|||++|+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~   79 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL   79 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence            5789999999999999999999999999986 5999999999999999888766544322 3446788999999999999


Q ss_pred             CCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCC
Q 016240          212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS  291 (392)
Q Consensus       212 p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs  291 (392)
                      |||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||
T Consensus        80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  159 (409)
T PRK10090         80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS  159 (409)
T ss_pred             CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence            99999999999999999999999999999999999999999999999999999999977788999999999999999999


Q ss_pred             hHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHH
Q 016240          292 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA  371 (392)
Q Consensus       292 ~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~  371 (392)
                      +.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus       160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~  238 (409)
T PRK10090        160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM  238 (409)
T ss_pred             HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence            9999999999987 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCccCCCCCC-CCccccCCCC
Q 016240          372 MKRVVGDPFKG-GIQQGPQVNQ  392 (392)
Q Consensus       372 ~~~~vG~p~~~-~~~~Gpli~~  392 (392)
                      +++++|||+++ ++++||||++
T Consensus       239 ~~~~~G~p~~~~~~~~gpli~~  260 (409)
T PRK10090        239 QAVQFGNPAERNDIAMGPLINA  260 (409)
T ss_pred             HhcCCCCCCCcccCccccccCH
Confidence            99999999998 9999999973

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=7.3e-57  Score=453.61  Aligned_cols=279  Identities=31%  Similarity=0.385  Sum_probs=256.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      +++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.++++++..+.+..
T Consensus         2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (443)
T cd07132           2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK   79 (443)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57899999999  9999999999999999999999999999999999999999988767999999999999988877643


Q ss_pred             ccCCC----CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 LTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      ...+.    ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv  158 (443)
T cd07132          80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC  158 (443)
T ss_pred             CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence            32211    12345788999999999999999999999999999999999999999999999999999999985 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      +|++++++. .+..++. ++||.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus       159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~  235 (443)
T cd07132         159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN  235 (443)
T ss_pred             EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence            999999544 4556665 589999999999999999999887 8999999999999999999999999999999999999


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +||.|++++|||||+++||+|+++|++++++++.||| ++++++||++++
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~  284 (443)
T cd07132         236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIIND  284 (443)
T ss_pred             CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCH
Confidence            9999999999999999999999999999999999998 789999999973

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=2.9e-56  Score=448.41  Aligned_cols=277  Identities=32%  Similarity=0.430  Sum_probs=253.1

Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC-hhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       108 av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      .++.|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+||+ ..++...|+..+++.++|++.......+
T Consensus         3 ~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~   80 (434)
T cd07133           3 LLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK   80 (434)
T ss_pred             HHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            5788999999  999999999999999999999999999999999999985 5666556999999999999988776544


Q ss_pred             ccC-CC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 LTA-PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~~~-~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      ... ..   ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~  159 (434)
T cd07133          81 PSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDE  159 (434)
T ss_pred             CcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence            322 11   12445688999999999999999999999999999999999999999999999999999999997 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      ||+|+| +.+.+..|..|+ +|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|+|
T Consensus       160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~  236 (434)
T cd07133         160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN  236 (434)
T ss_pred             EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence            999998 456788888765 9999999999999999999887 8999999999999999999999999999999999999


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +||.|++++|||||+++||+|+++|+++++++++|+  ++++++||++++
T Consensus       237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~  284 (434)
T cd07133         237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINE  284 (434)
T ss_pred             CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCH
Confidence            999999999999999999999999999999999996  467899999873

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=3.9e-56  Score=447.32  Aligned_cols=280  Identities=34%  Similarity=0.376  Sum_probs=258.4

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      +++++|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus         2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   79 (433)
T cd07134           2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK   79 (433)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57889999999  9999999999999999999999999999999999999999987656999999999999987655433


Q ss_pred             c-cCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 L-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      . ..+.   ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~  158 (433)
T cd07134          80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE  158 (433)
T ss_pred             CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence            2 1211   12445789999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      ++++++ +.+.+..|++|+ ++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|++
T Consensus       159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~  235 (433)
T cd07134         159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN  235 (433)
T ss_pred             EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence            999998 456788899997 9999999999999999999987 8899999999999999999999999999999999999


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC-CCCCCccccCCCC
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQVNQ  392 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p-~~~~~~~Gpli~~  392 (392)
                      +||.|+++++||||+++||+|+++|+++++.++.|+| .+.++++|||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~  286 (433)
T cd07134         236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVND  286 (433)
T ss_pred             cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCH
Confidence            9999999999999999999999999999999988887 8899999999873

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=4.7e-56  Score=446.34  Aligned_cols=278  Identities=32%  Similarity=0.428  Sum_probs=255.9

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcC
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG  186 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~  186 (392)
                      .+++.|++||+  .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++...+...+
T Consensus         2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~   79 (426)
T cd07087           2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK   79 (426)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            37899999999  9999999999999999999999999999999999999998777667999999999999988776543


Q ss_pred             cc-CCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCe
Q 016240          187 LT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV  262 (392)
Q Consensus       187 ~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~  262 (392)
                      .. ...   ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.+ |+|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv  158 (426)
T cd07087          80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA  158 (426)
T ss_pred             CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence            22 111   1234578899999999999999999999999999999999999999999999999999999999 699999


Q ss_pred             EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       263 v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      +|+++|+ .+.+..|+.|+ +|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus       159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~  235 (426)
T cd07087         159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN  235 (426)
T ss_pred             EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence            9999984 45688899998 9999999999999999999987 8899999999999999999999999999999999999


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +||.|+++++||||+++||+|+++|++++++++.|+|. +++++||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~  283 (426)
T cd07087         236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIIN  283 (426)
T ss_pred             cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCC
Confidence            99999999999999999999999999999999877775 6899999987

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=1.1e-56  Score=448.73  Aligned_cols=277  Identities=21%  Similarity=0.280  Sum_probs=249.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHH-HHHHHHHHHHh
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADK  183 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~a~~~~~  183 (392)
                      +++++++|++||+  .|+++|.++|.++|++++++|+++.++|++++++|+|||+.+++..|+..+++ .+++++..  .
T Consensus         1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~   76 (436)
T cd07122           1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K   76 (436)
T ss_pred             ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence            4689999999999  99999999999999999999999999999999999999998876557877787 78888752  2


Q ss_pred             hcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH----HcCCC
Q 016240          184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLP  259 (392)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~----~aGlP  259 (392)
                      ..+.. ....+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.    ++|+|
T Consensus        77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P  155 (436)
T cd07122          77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP  155 (436)
T ss_pred             ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence            22221 22224456889999999999999999999999999999999999999999999999999888864    78999


Q ss_pred             CCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHH
Q 016240          260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL  339 (392)
Q Consensus       260 ~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~  339 (392)
                      +|++|++++.+.+.+..|.+||+||.|.||||+++++    .+++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus       156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~  230 (436)
T cd07122         156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK  230 (436)
T ss_pred             chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence            9999999987777889999999999999999999764    3454 7899999999999999999999999999999999


Q ss_pred             HhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcC-------ccCCC-CCCCCccccCCC
Q 016240          340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQVN  391 (392)
Q Consensus       340 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~-------~vG~p-~~~~~~~Gpli~  391 (392)
                      |+|+||.|++++|||||+++||+|+++|+++...+       ++|+| .+.++++||+++
T Consensus       231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~  290 (436)
T cd07122         231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIV  290 (436)
T ss_pred             hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCcccc
Confidence            99999999999999999999999999999999987       89999 477889999986

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=2.1e-55  Score=440.31  Aligned_cols=256  Identities=20%  Similarity=0.228  Sum_probs=225.3

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHH--HHHHHHHHHH
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWAD  182 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~a~~~~  182 (392)
                      ++++++.|++||+  .|+++|+++|.++|+++++.|++++++|+++++.|+|||+.++.. ++.....  ..++++.   
T Consensus         1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~---   74 (439)
T cd07081           1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD---   74 (439)
T ss_pred             CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence            4689999999999  999999999999999999999999999999999999999988753 4544433  2233222   


Q ss_pred             hhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH----HcCC
Q 016240          183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGL  258 (392)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~----~aGl  258 (392)
                      ...+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+++|+++..++++|.    ++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~  154 (439)
T cd07081          75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA  154 (439)
T ss_pred             cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence            222223333234456889999999999999999999999999999999999999999999999999888875    7799


Q ss_pred             CCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHH
Q 016240          259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA  338 (392)
Q Consensus       259 P~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~  338 (392)
                      |+|+||+|++.+.+.++.|..||+|++|.||||++    +++.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus       155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~  229 (439)
T cd07081         155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS  229 (439)
T ss_pred             ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999987777899999999999999999997    4556665 789999999999999999999999999999999


Q ss_pred             HHhccCCcccCCcEEEEeCcchHHHHHHHHHHH
Q 016240          339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALA  371 (392)
Q Consensus       339 ~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~  371 (392)
                      +|+|+||.|++.+|||||+++||+|+++|++++
T Consensus       230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  262 (439)
T cd07081         230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG  262 (439)
T ss_pred             HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999886

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=7.2e-55  Score=442.22  Aligned_cols=284  Identities=18%  Similarity=0.180  Sum_probs=248.6

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240           99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus        99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  178 (392)
                      ..+.+|++++++.|++||+  .|++++.++|.++|+++++.|+++.++|+++++.|+|||..+.+..+.......+.+++
T Consensus         4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~   81 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI   81 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999  99999999999999999999999999999999999999987754322333455555554


Q ss_pred             HHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHH----HHHH
Q 016240          179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLH  254 (392)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~----~ll~  254 (392)
                      ..... .+. ...+.+...+..++|+|||++|+|||||+....+++++||++||+||+|||+.+|.++..++    +++.
T Consensus        82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~  159 (488)
T TIGR02518        82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE  159 (488)
T ss_pred             hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence            42222 232 22233456788999999999999999999999999999999999999999999999999854    4557


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL  334 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~  334 (392)
                      ++|+|+|+||+|++.+.+.+..|+.|++||+|.||||+.+++.    +.. .++|+++|+|||+|+||++|||+|.|++.
T Consensus       160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~  234 (488)
T TIGR02518       160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYS-SGTPAIGVGPGNGPAYIERTANVKKAVRD  234 (488)
T ss_pred             HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence            9999999999999877788999999999999999999997643    433 67999999999999999999999999999


Q ss_pred             HHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHH-------HhcCccCCC-CCCCCccccCCC
Q 016240          335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQVN  391 (392)
Q Consensus       335 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~-------~~~~~vG~p-~~~~~~~Gpli~  391 (392)
                      +++++|+|+||.|++.+|||||+++||+|+++|+++       .+.+++|+| +++++++||+++
T Consensus       235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~  299 (488)
T TIGR02518       235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIV  299 (488)
T ss_pred             HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccc
Confidence            999999999999999999999999999999999998       999999996 778999999985

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=1.5e-54  Score=436.76  Aligned_cols=273  Identities=26%  Similarity=0.275  Sum_probs=251.3

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhc
Q 016240          106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ  185 (392)
Q Consensus       106 ~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~  185 (392)
                      +++++.|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||+ +.. .|+..+++.+++++.......
T Consensus         2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~   77 (442)
T cd07084           2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR   77 (442)
T ss_pred             hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence            578999999999  9999999999999999999999999999999999999998 544 599999999999998876532


Q ss_pred             --CccC---CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCC-C
Q 016240          186 --GLTA---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-P  259 (392)
Q Consensus       186 --~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGl-P  259 (392)
                        +...   +...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P  157 (442)
T cd07084          78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP  157 (442)
T ss_pred             ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence              2111   111134568899999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             CCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCC-CHHHHHHHHHHH
Q 016240          260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYA  338 (392)
Q Consensus       260 ~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dA-Dl~~a~~~i~~~  338 (392)
                      +|+++++++++. .+..|+.|++++.|+||||+++|+.|++.++.   +|+++|+|||||+||++|| |+|.+++.++++
T Consensus       158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~  233 (442)
T cd07084         158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD  233 (442)
T ss_pred             ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence            999999999765 88999999999999999999999999998864   7999999999999999999 699999999999


Q ss_pred             HHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          339 LFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       339 ~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +|.|+||.|++++|||||++ ++|+|+++|+++++++++|     ++++||+++
T Consensus       234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~  282 (442)
T cd07084         234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQT  282 (442)
T ss_pred             HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhh
Confidence            99999999999999999999 9999999999999999999     689999875

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=9.2e-54  Score=432.58  Aligned_cols=271  Identities=24%  Similarity=0.340  Sum_probs=245.7

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI  184 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~  184 (392)
                      +++|++.|+++|+  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++......
T Consensus         1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~   77 (454)
T cd07129           1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG   77 (454)
T ss_pred             ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            4689999999999  99999999999999999999999999999999999999998865 69999999999999876643


Q ss_pred             c--CccCCC-------CCCCeeEEEecccceEEEEcCCcccHHH--HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHH
Q 016240          185 Q--GLTAPA-------DGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL  253 (392)
Q Consensus       185 ~--~~~~~~-------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll  253 (392)
                      .  +...+.       ..+...+.+++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|.++.++++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~  157 (454)
T cd07129          78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI  157 (454)
T ss_pred             CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence            2  222110       1123457889999999999999999988  4589999999999999999999999999998877


Q ss_pred             H----HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC-CCccEEEecCCCCcEEEcCCC--
Q 016240          254 H----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA--  326 (392)
Q Consensus       254 ~----~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~-~~~~v~lelgG~~~~iV~~dA--  326 (392)
                      .    ++|+|+|+||+|+|++.+.+..|+.|++|+.|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|+  
T Consensus       158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~  237 (454)
T cd07129         158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA  237 (454)
T ss_pred             HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence            4    889999999999997767899999999999999999999999999998863 589999999999999999999  


Q ss_pred             -CHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCccCC
Q 016240          327 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       327 -Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~vG~  378 (392)
                       |+|.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++|+
T Consensus       238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~  291 (454)
T cd07129         238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQT  291 (454)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCC
Confidence             89999999999999999999999999999999 99999999999999999874

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=9.9e-55  Score=413.95  Aligned_cols=302  Identities=43%  Similarity=0.800  Sum_probs=283.8

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||+|+|+++.++++++.+||.|+.+|++++.++..|+++|+.+|+.||+.|.|.+++..+|.+.|.++++++++|+++
T Consensus       423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee  502 (881)
T KOG2452|consen  423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE  502 (881)
T ss_pred             hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCC----CCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG----PYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      |+.+.+++.|.-+.-+...-+...++.+|||++|.+++.+.++|...    .....+.++|+|||++|+|||||+.++.|
T Consensus       503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw  582 (881)
T KOG2452|consen  503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW  582 (881)
T ss_pred             hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence            99999999998877777778999999999999999999999988543    45567899999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      +.+.+|++-   ++|           ++++       .|++|+++|++.-+++.|..||+|+.|-||||+++|+.|++.|
T Consensus       583 k~aaclaa~---~~k-----------~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc  641 (881)
T KOG2452|consen  583 KTAACLAAQ---VLK-----------FAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC  641 (881)
T ss_pred             HHHHHHHHH---Hhh-----------hhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence            999999652   111           2221       4789999999999999999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240          303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG  382 (392)
Q Consensus       303 a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~  382 (392)
                      +.++.|+|.+|+||++|+||+.|+|+++|+.....+.|++.|..|++..|+||.+++.|+|+.++.++.+++++|||+|.
T Consensus       642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr  721 (881)
T KOG2452|consen  642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR  721 (881)
T ss_pred             hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccC
Q 016240          383 GIQQGPQ  389 (392)
Q Consensus       383 ~~~~Gpl  389 (392)
                      +|+-||+
T Consensus       722 ~t~hgpq  728 (881)
T KOG2452|consen  722 DTDHGPQ  728 (881)
T ss_pred             cccCCch
Confidence            9999997

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=1.6e-53  Score=426.56  Aligned_cols=252  Identities=23%  Similarity=0.247  Sum_probs=225.8

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHH
Q 016240          102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA  181 (392)
Q Consensus       102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~  181 (392)
                      .+|++++++.|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++.       ++.+++++...
T Consensus         3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~   73 (429)
T cd07121           3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT   73 (429)
T ss_pred             hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence            4789999999999999  99999999999999999999999999999999999999986642       45566655422


Q ss_pred             HhhcCcc-C-C---CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHH---
Q 016240          182 DKIQGLT-A-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---  253 (392)
Q Consensus       182 ~~~~~~~-~-~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll---  253 (392)
                         .+.. . +   ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++   
T Consensus        74 ---~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~  150 (429)
T cd07121          74 ---PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA  150 (429)
T ss_pred             ---CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence               1111 1 1   112234578889999999999999999999999999999999999999999999999999987   


Q ss_pred             -HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHH
Q 016240          254 -HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA  332 (392)
Q Consensus       254 -~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~  332 (392)
                       .++|+|+|++|+|++++.+.++.|++||+||.|.||||+.+|+.|++.     .+|+++|+|||||+||++|||+|+|+
T Consensus       151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa  225 (429)
T cd07121         151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAA  225 (429)
T ss_pred             HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHH
Confidence             478999999999998766788999999999999999999999999875     37999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHH
Q 016240          333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL  370 (392)
Q Consensus       333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~  370 (392)
                      +.+++++|+|+||.|++++|||||+++||+|+++|+++
T Consensus       226 ~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~  263 (429)
T cd07121         226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN  263 (429)
T ss_pred             HHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC
Confidence            99999999999999999999999999999999999987

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=1e-52  Score=423.74  Aligned_cols=283  Identities=52%  Similarity=0.835  Sum_probs=265.7

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhc
Q 016240          106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ  185 (392)
Q Consensus       106 ~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~  185 (392)
                      +++++.|+++++  .|++++.++|.++|+++++.|.++.++|++++++|+||++.++. .|+..+++.+++++...+++.
T Consensus         1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~   77 (432)
T cd07078           1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH   77 (432)
T ss_pred             CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            368899999999  99999999999999999999999999999999999999987754 599999999999998888765


Q ss_pred             Ccc-CCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEE
Q 016240          186 GLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN  264 (392)
Q Consensus       186 ~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~  264 (392)
                      +.. .+...+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..++++|.++|+|+|+++
T Consensus        78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~  157 (432)
T cd07078          78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN  157 (432)
T ss_pred             CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence            543 2333466788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccC
Q 016240          265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG  344 (392)
Q Consensus       265 vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~G  344 (392)
                      ++++++.+.+..|..|+++|.|.||||.++++.|.+.+++ +++|+++|+||++++||++|+|++.|++.+++++|.++|
T Consensus       158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G  236 (432)
T cd07078         158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG  236 (432)
T ss_pred             EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence            9999766688999999999999999999999999999997 789999999999999999999999999999999999999


Q ss_pred             CcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       345 Q~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |.|+++++||||++++++|+++|+++++++++|+|+|+++++||++++
T Consensus       237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~  284 (432)
T cd07078         237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISA  284 (432)
T ss_pred             CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCH
Confidence            999999999999999999999999999999999999999999999873

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=7.6e-53  Score=425.08  Aligned_cols=256  Identities=23%  Similarity=0.222  Sum_probs=227.7

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240           99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus        99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  178 (392)
                      ....+|++++++.|++||.  .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++..       ..+++++
T Consensus        32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~  102 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA  102 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence            4578999999999999999  999999999999999999999999999999999999999887542       3345554


Q ss_pred             HHHHhh---cCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016240          179 GWADKI---QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH-  254 (392)
Q Consensus       179 ~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~-  254 (392)
                      ......   ...... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. 
T Consensus       103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~  181 (465)
T PRK15398        103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE  181 (465)
T ss_pred             HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence            433211   111111 123456788899999999999999999999999999999999999999999999999999876 


Q ss_pred             ---HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHH
Q 016240          255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA  331 (392)
Q Consensus       255 ---~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a  331 (392)
                         ++|+|+|++|++++.+.+.++.|++||+||+|.||||+++|+.|++     ..+|+++|+|||||+||++|||+|.|
T Consensus       182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A  256 (465)
T PRK15398        182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA  256 (465)
T ss_pred             HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence               6899999999999866678899999999999999999999999987     24799999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHH
Q 016240          332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA  369 (392)
Q Consensus       332 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~  369 (392)
                      ++.+++++|+|+||.|++++|||||+++||+|+++|++
T Consensus       257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~  294 (465)
T PRK15398        257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEK  294 (465)
T ss_pred             HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=9.1e-52  Score=413.34  Aligned_cols=265  Identities=22%  Similarity=0.256  Sum_probs=235.3

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhh-------hchhHH
Q 016240          102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT  170 (392)
Q Consensus       102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~  170 (392)
                      .+|++++++.|+++|+  .|+++|..+|.++|+++++.|++|.++|+++++.|+||+..    ++..       .|+..+
T Consensus         3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~   80 (417)
T PRK00197          3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI   80 (417)
T ss_pred             hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence            4689999999999999  99999999999999999999999999999999988877642    3321       488899


Q ss_pred             HHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHH
Q 016240          171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL  247 (392)
Q Consensus       171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~  247 (392)
                      ++.+++++.+.+.. +...+.   ..+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus        81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~  157 (417)
T PRK00197         81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR  157 (417)
T ss_pred             HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence            99999998876643 433332   22335788999999999999886 4 678899999999999999999999999999


Q ss_pred             HHHHHH----HHcCCCCCeEEEEeCCc-hhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240          248 YVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV  322 (392)
Q Consensus       248 ~l~~ll----~~aGlP~g~v~vv~g~~-~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV  322 (392)
                      .+++++    .++|+|+|++|+|++.+ .+.+..|..|++||+|+||||+++|+.|++.+    ++|+++|+|||||+||
T Consensus       158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV  233 (417)
T PRK00197        158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV  233 (417)
T ss_pred             HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence            998885    68899999999999644 45788899899999999999999999998864    5899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      ++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++
T Consensus       234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  286 (417)
T PRK00197        234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGV  286 (417)
T ss_pred             eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCC
Confidence            9999999999999999999999 9999999999999999999999999999987

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=4.4e-51  Score=407.09  Aligned_cols=259  Identities=20%  Similarity=0.249  Sum_probs=227.4

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhh-------hhchhHHHHHHH
Q 016240          107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSA-------QTEVPMTTRLFR  175 (392)
Q Consensus       107 ~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~-------~~ev~~~~~~l~  175 (392)
                      ..++.|+++|+  .|+++|.++|.++|+++++.|++++++|+++++.|+||+..    ++.       ..|+..+++.++
T Consensus         2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~   79 (406)
T cd07079           2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR   79 (406)
T ss_pred             hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence            46788999999  99999999999999999999999999999999777666643    222       148999999999


Q ss_pred             HHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHH
Q 016240          176 YYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL  252 (392)
Q Consensus       176 ~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~l  252 (392)
                      +++...+. .+...+.   +.+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..++++
T Consensus        80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~  156 (406)
T cd07079          80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI  156 (406)
T ss_pred             HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence            99876542 2333322   2234567899999999999996 55 67889999999999999999999999999999999


Q ss_pred             HH----HcCCCCCeEEEEeCCch-hHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCC
Q 016240          253 LH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD  327 (392)
Q Consensus       253 l~----~aGlP~g~v~vv~g~~~-~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dAD  327 (392)
                      +.    ++|+|+|++|+|++.+. ..++.|..||++|+|+||||+++|+.|++.+    ++|+++|+|||||+||++|||
T Consensus       157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD  232 (406)
T cd07079         157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD  232 (406)
T ss_pred             HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence            86    89999999999998543 6788899999999999999999999998776    589999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          328 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       328 l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      +|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++..
T Consensus       233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~g  279 (406)
T cd07079         233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAG  279 (406)
T ss_pred             HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999 999999999999999999999999998763

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=5.4e-51  Score=403.76  Aligned_cols=255  Identities=20%  Similarity=0.226  Sum_probs=226.6

Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHhcCCCh--hhh---hhhchhHHHHHHHHHHHH
Q 016240          112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF--EQS---AQTEVPMTTRLFRYYAGW  180 (392)
Q Consensus       112 A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~--~~a---~~~ev~~~~~~l~~~a~~  180 (392)
                      |++||+  .|++++.++|.++|+++++.|+++.++|+++      ++.|+|||.  .+.   ...|+..+++.+++++..
T Consensus         1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~   78 (398)
T TIGR00407         1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIEL   78 (398)
T ss_pred             ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcC
Confidence            467888  9999999999999999999999999999999      899999993  221   235899999999999988


Q ss_pred             HHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHH----H
Q 016240          181 ADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----L  253 (392)
Q Consensus       181 ~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~l----l  253 (392)
                      ++.. ++..+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++    |
T Consensus        79 a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al  155 (398)
T TIGR00407        79 ADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL  155 (398)
T ss_pred             CCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence            7664 443332   23556788999999999999997 6 67888999999999999999999999999999999    5


Q ss_pred             HHcCCCCCeEEEEeCCc-hhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHH
Q 016240          254 HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA  332 (392)
Q Consensus       254 ~~aGlP~g~v~vv~g~~-~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~  332 (392)
                      .++|+|+|+||+|++.+ .+.++.|..||+||+|+||||+.+++.+++.    ..+|+++|+|||||+||++|||+|.|+
T Consensus       156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa  231 (398)
T TIGR00407       156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAI  231 (398)
T ss_pred             HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHH
Confidence            69999999999999744 4578899999999999999999999988764    357999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      +.+++++|++ ||.|++++|+|||+++||+|+++|++++.++++
T Consensus       232 ~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~  274 (398)
T TIGR00407       232 KVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV  274 (398)
T ss_pred             HHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            9999999965 999999999999999999999999999987653

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.9e-50  Score=375.53  Aligned_cols=311  Identities=29%  Similarity=0.484  Sum_probs=287.5

Q ss_pred             CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 016240           78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK  157 (392)
Q Consensus        78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  157 (392)
                      .+.++++.+-|.||..++.++..++.|+++-+..|++|++  .|.+.+...|.++|+.+.+.+-+|.|.+++..++|+||
T Consensus        61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGK  138 (583)
T KOG2454|consen   61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGK  138 (583)
T ss_pred             CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCc
Confidence            3567899999999999999999999999999999999999  99999999999999999999999999999999999999


Q ss_pred             ChhhhhhhchhHHHHHHHHHHHHHHhhcCc-cCCCC---CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCE
Q 016240          158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT  233 (392)
Q Consensus       158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  233 (392)
                      +..++..+|+-.+++.+.|.....++.... ..|..   .-...++.++|+||+..|.|||||+.+.+.+++.||.+||.
T Consensus       139 TmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNa  218 (583)
T KOG2454|consen  139 TMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNA  218 (583)
T ss_pred             hhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCe
Confidence            999999999999999999888766554332 22211   13456889999999999999999999999999999999999


Q ss_pred             EEEecCCCChHHHHHHHHH----HHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCcc
Q 016240          234 IVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP  309 (392)
Q Consensus       234 VIlKps~~~p~t~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~  309 (392)
                      +|+|-|+.+.++.....++    |...|-|+++||++++- ++.++.|.+|+.++.+.|.||..+++.|++.+++ .++|
T Consensus       219 IVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTP  296 (583)
T KOG2454|consen  219 IVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTP  296 (583)
T ss_pred             EEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCc
Confidence            9999999999998876665    45569999999999994 4678999999999999999999999999999998 9999


Q ss_pred             EEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccC
Q 016240          310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ  389 (392)
Q Consensus       310 v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl  389 (392)
                      +++|+|||+++||++|+|++..+..++++.|..+||.|.+.+|++||+++||.|+..|-++++.++.|.|.-.+.|||.|
T Consensus       297 v~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm  376 (583)
T KOG2454|consen  297 VTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAM  376 (583)
T ss_pred             EEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 016240          390 VNQ  392 (392)
Q Consensus       390 i~~  392 (392)
                      ++.
T Consensus       377 ~s~  379 (583)
T KOG2454|consen  377 CSQ  379 (583)
T ss_pred             hhc
Confidence            873

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-50  Score=377.91  Aligned_cols=324  Identities=26%  Similarity=0.365  Sum_probs=299.5

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      +..+|+.|||+.+..  ..+....+|.+ +.+++++..++..+|++|+++|.+|++  .|..+|..+|.+|++|.|++++
T Consensus        57 ~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis  132 (561)
T KOG2455|consen   57 PLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS  132 (561)
T ss_pred             ceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence            556799999999974  34577788887 678899999999999999999999998  9999999999999999999999


Q ss_pred             -hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEeccc-ceEEEEcCCcccHH
Q 016240          142 -RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLL  218 (392)
Q Consensus       142 -~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~  218 (392)
                       +++-+|....+...||...++..+-..+.++++|+.+..+.++....... ..+..+...++|+ |.|.+|+||||-..
T Consensus       133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI  212 (561)
T KOG2455|consen  133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI  212 (561)
T ss_pred             chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence             88889999999999999999876567789999999999999887665443 4567778888888 99999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240          219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV  298 (392)
Q Consensus       219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i  298 (392)
                      ......+||| +||+|++|||..+.++++++.++|+|||+|+|++|+||++++..++.+..+|++.++.||||+.+-+.+
T Consensus       213 ~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~l  291 (561)
T KOG2455|consen  213 GGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHL  291 (561)
T ss_pred             ccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHH
Confidence            8888889998 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhC-----CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          299 LQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       299 ~~~aa~~-----~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      .++.+..     ...+++.|+||||.-+|+++||++.++...++++|.++||.|.+.+|+||+++.++.+.+.|.+.-++
T Consensus       292 wk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q  371 (561)
T KOG2455|consen  292 WKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ  371 (561)
T ss_pred             HHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence            9988762     46899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCC-CCCCCccccCCC
Q 016240          374 RVVGDP-FKGGIQQGPQVN  391 (392)
Q Consensus       374 ~~vG~p-~~~~~~~Gpli~  391 (392)
                      +++||| .|.++++||||+
T Consensus       372 ~~igd~~~d~~~f~gavIh  390 (561)
T KOG2455|consen  372 LKIGDPVIDFSTFIGAVIH  390 (561)
T ss_pred             cccCCccccccchhhhhcc
Confidence            999998 788999999997

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-49  Score=427.24  Aligned_cols=266  Identities=20%  Similarity=0.250  Sum_probs=232.0

Q ss_pred             EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHH
Q 016240           96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR  175 (392)
Q Consensus        96 ~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~  175 (392)
                      .....+.+|+++++++|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++...++..+++.++
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~   82 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY   82 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence            3456789999999999999999  99999999999999999999999999999999999999988865434444444444


Q ss_pred             HHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016240          176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH-  254 (392)
Q Consensus       176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~-  254 (392)
                      ++.. .++..+. .+.+.....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. 
T Consensus        83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~  160 (862)
T PRK13805         83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD  160 (862)
T ss_pred             HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence            3332 1122222 222234556889999999999999999999999999999999999999999999999999998875 


Q ss_pred             ---HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHH
Q 016240          255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA  331 (392)
Q Consensus       255 ---~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a  331 (392)
                         ++|+|+|+||+|++.+.+.+..|+.|++||+|.||||+.+++    .++. +++|+++|+|||||+||++|||+|.|
T Consensus       161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~A  235 (862)
T PRK13805        161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRA  235 (862)
T ss_pred             HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHH
Confidence               689999999999987777899999999999999999998653    4454 78999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHH
Q 016240          332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL  370 (392)
Q Consensus       332 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~  370 (392)
                      ++.+++++|+|+||.|++++|||||+++||+|+++|+++
T Consensus       236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~  274 (862)
T PRK13805        236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH  274 (862)
T ss_pred             HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh
Confidence            999999999999999999999999999999999999775

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=6.2e-49  Score=413.79  Aligned_cols=258  Identities=21%  Similarity=0.219  Sum_probs=228.6

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHhcC--CChhhhh---hhchhHHH
Q 016240          103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTT  171 (392)
Q Consensus       103 ~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a~---~~ev~~~~  171 (392)
                      +++++++++|++||+  .|+++|..+|.++|+++++.|+++.++|++++      ++|+|  ||+.++.   ..|+..++
T Consensus       294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~  371 (718)
T PLN02418        294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA  371 (718)
T ss_pred             HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence            459999999999999  99999999999999999999999999999996      77999  8877754   45999999


Q ss_pred             HHHHHHHHHHHhhcCccCC---CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHH
Q 016240          172 RLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY  248 (392)
Q Consensus       172 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~  248 (392)
                      +.++|++.. ....+...+   ...+...++.++|+|||++|+||| |+... ++++|||++||+||+|||+.+|+++..
T Consensus       372 ~~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~  448 (718)
T PLN02418        372 ASIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI  448 (718)
T ss_pred             HHHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence            999999987 334444433   223444688999999999999999 99998 899999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCe----EEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          249 VSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       249 l~~ll~~aGlP~g~----v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      |++++.++ +|+|+    +|+|+| +.+.++.|..|++|++|+||||+..   +++.++. ++||+++|+|||||+||++
T Consensus       449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~-~~k~v~lELGGk~p~iV~~  522 (718)
T PLN02418        449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKAS-TKIPVLGHADGICHVYVDK  522 (718)
T ss_pred             HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence            99999999 99995    999997 5678999999999999999999964   4444555 7899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHH-HHHHHHHHHh
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAM  372 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~-f~~~L~~~~~  372 (392)
                      |||+|.|++.+++++|.| ||.|++.+|+|||+++||+ .+..+.+.+.
T Consensus       523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~~~i~~a~  570 (718)
T PLN02418        523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLNDLLVALR  570 (718)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEeccccccccHHHHHHHHH
Confidence            999999999999999999 9999999999999999998 5555555443

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=5.3e-49  Score=392.00  Aligned_cols=254  Identities=20%  Similarity=0.220  Sum_probs=231.5

Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh----------hhchhHHHHHHHHHHHH
Q 016240          111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAGW  180 (392)
Q Consensus       111 ~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~a~~  180 (392)
                      +|++||+  .|++++..+|.++|+++++.|+++.++|+++++.|+|||+.+..          ..|+..+++.+++++..
T Consensus         2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~   79 (397)
T cd07077           2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS   79 (397)
T ss_pred             hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence            6888999  99999999999999999999999999999999999999965432          13788999999999876


Q ss_pred             HHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHc---C
Q 016240          181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA---G  257 (392)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~a---G  257 (392)
                      ..+..+...+.  ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.++   |
T Consensus        80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g  156 (397)
T cd07077          80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH  156 (397)
T ss_pred             cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence            55554443332  3457899999999999999999999 9999999999999999999999999999999999887   9


Q ss_pred             CCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHH
Q 016240          258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY  337 (392)
Q Consensus       258 lP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~  337 (392)
                      +|+++|+++++.+.+.+..|+.|+++|+|+||||+++++.+.+.+.   .+|+++|+||++++||++|||+|.|++.+++
T Consensus       157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~  233 (397)
T cd07077         157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD  233 (397)
T ss_pred             CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence            9999999999877778899999999999999999999999988763   5899999999999999999999999999999


Q ss_pred             HHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       338 ~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      ++|+| ||.|+++++||||+++||+|+++|++++..
T Consensus       234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~  268 (397)
T cd07077         234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV  268 (397)
T ss_pred             hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh
Confidence            99999 999999999999999999999999999886

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=4.9e-48  Score=381.76  Aligned_cols=276  Identities=53%  Similarity=0.821  Sum_probs=249.0

Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC-
Q 016240          111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-  189 (392)
Q Consensus       111 ~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-  189 (392)
                      +|+++++  .|++++.++|.++|+++++.|.++.++|++++++|+|||+.++. .|+..+++.+++++...++..+... 
T Consensus         2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~   78 (367)
T cd06534           2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELP   78 (367)
T ss_pred             hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            5788898  99999999999999999999999999999999999999998865 5999999999999998887765332 


Q ss_pred             CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC
Q 016240          190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY  269 (392)
Q Consensus       190 ~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~  269 (392)
                      +...+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++++
T Consensus        79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~  158 (367)
T cd06534          79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG  158 (367)
T ss_pred             ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence            23346678899999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccC
Q 016240          270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA  349 (392)
Q Consensus       270 ~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a  349 (392)
                      +++.+..|..|+++|.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|+++||.|++
T Consensus       159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s  237 (367)
T cd06534         159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA  237 (367)
T ss_pred             chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence            76688999999999999999999999999999987 78999999999999999999999999999999999999999999


Q ss_pred             CcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCC
Q 016240          350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQV  390 (392)
Q Consensus       350 ~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli  390 (392)
                      +++||||++++|+|+++|+.-+....-..|.-..-.+||++
T Consensus       238 ~~~v~v~~~~~~~f~~~l~tl~~~~~~~~~~~~~E~fgPv~  278 (367)
T cd06534         238 ASRLLVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPVL  278 (367)
T ss_pred             CcEEEEcHHHHHHHHHhhceeeeCCCCCCccccCCccCceE
Confidence            99999999999999999983333322233333345678875

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1e-47  Score=361.62  Aligned_cols=280  Identities=28%  Similarity=0.363  Sum_probs=253.5

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI  184 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~  184 (392)
                      ++..++.+|.+|.+|  ++.+.+.|.+.|+++...+++|.++|.+++..|.+|+..++...|+...++.++++....+++
T Consensus         4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w   81 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW   81 (477)
T ss_pred             HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence            455689999999966  899999999999999999999999999999999999999998889999999999988877776


Q ss_pred             cCcc-CC---CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 016240          185 QGLT-AP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP  260 (392)
Q Consensus       185 ~~~~-~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~  260 (392)
                      .... .+   .......+.+.+|.|||++|+|||||+...+.++++||++||+||+|||+.+|.++..|++++-+. ++.
T Consensus        82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~  160 (477)
T KOG2456|consen   82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ  160 (477)
T ss_pred             ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence            4332 22   222566789999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             CeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHH
Q 016240          261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF  340 (392)
Q Consensus       261 g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~  340 (392)
                      +++.+|.|.- +....|..| ++|+|.||||+.+|+.|+.++++ +++||++|||||||++|++|+|++-+++.|+|+++
T Consensus       161 ~~~~VV~Ggv-~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~  237 (477)
T KOG2456|consen  161 DLIRVVNGGV-PETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW  237 (477)
T ss_pred             ceEEEecCCC-chHHHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence            9999999944 445556655 89999999999999999999998 99999999999999999999999999999999999


Q ss_pred             hccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       341 ~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      +|+||.|.++++|+++.++++.++++++..+++. .|+..+++.+++=+|+
T Consensus       238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn  287 (477)
T KOG2456|consen  238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIIN  287 (477)
T ss_pred             ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhh
Confidence            9999999999999999999999999999999987 6766677888887765

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=6.2e-47  Score=347.55  Aligned_cols=315  Identities=30%  Similarity=0.514  Sum_probs=293.1

Q ss_pred             eCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 016240           70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAA  149 (392)
Q Consensus        70 I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~  149 (392)
                      .+|+|-  .+|..++.++|.+.++|+.|..++.+|.+.+++.|++|++  .|-..|...|.++.+.+.|.|....+.|-+
T Consensus        24 y~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg~   99 (507)
T KOG2453|consen   24 YHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLGK   99 (507)
T ss_pred             eeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence            356996  5899999999999999999999999999999999999999  999999999999999999999999999999


Q ss_pred             HHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHH
Q 016240          150 LETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL  228 (392)
Q Consensus       150 ~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL  228 (392)
                      ++++|+||...+. .+|+.+-++.+.|..++.+.+.+..+|.. .++-....|.|+|+|++|+.+|||....-|.-..+|
T Consensus       100 lvslemgkilaeg-vgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM  178 (507)
T KOG2453|consen  100 LVSLEMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM  178 (507)
T ss_pred             hhhhhhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence            9999999998885 47999999999999999999999888755 355556789999999999999999999999999999


Q ss_pred             hcCCEEEEecCCCChHHHHHHHH----HHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          229 ACGNTIVLKTAEQTPLSALYVSK----LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       229 aaGN~VIlKps~~~p~t~~~l~~----ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      .+||+|++||++++|+++...-+    .|.+--+|++.....+| +.+.+.++..+.++..+.||||+++++.+.++...
T Consensus       179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa  257 (507)
T KOG2453|consen  179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA  257 (507)
T ss_pred             hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence            99999999999999988766544    45666799999999988 66889999999999999999999999999998887


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       ++.+..+|+||+|++||.+|||+..++...++++....||.|+..+|++||+++||+.+++|++.++++++|+|+|+.+
T Consensus       258 -rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt  336 (507)
T KOG2453|consen  258 -RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT  336 (507)
T ss_pred             -HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence             6788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 016240          385 QQGPQVN  391 (392)
Q Consensus       385 ~~Gpli~  391 (392)
                      .+|||..
T Consensus       337 l~gplht  343 (507)
T KOG2453|consen  337 LIGPLHT  343 (507)
T ss_pred             eeccccC
Confidence            9999975

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=7.6e-45  Score=383.48  Aligned_cols=253  Identities=20%  Similarity=0.214  Sum_probs=216.5

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh---------------chh
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVP  168 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~---------------ev~  168 (392)
                      +++..+++|++||.  .|+.++.++|.++|+++++.|+++.++|+    .++||++.+++..               |+.
T Consensus       287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~  360 (715)
T TIGR01092       287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS  360 (715)
T ss_pred             HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence            48888999999999  99999999999999999999999999997    4788888765431               477


Q ss_pred             HHHHHHHHHHHHHHhhcCccCC---CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHH
Q 016240          169 MTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS  245 (392)
Q Consensus       169 ~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t  245 (392)
                      .++..+++++.. ....+...+   ...+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|++
T Consensus       361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t  437 (715)
T TIGR01092       361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS  437 (715)
T ss_pred             HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence            788888888873 333333332   112334578899999999999999 9998 6899999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCC----eEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          246 ALYVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       246 ~~~l~~ll~~aGlP~g----~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      +..+++++.++ +|+|    ++++|++ ++..++.|..|+.+|+|+||||+.+|+.|++.++    +|+++|+|||||+|
T Consensus       438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i  511 (715)
T TIGR01092       438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY  511 (715)
T ss_pred             HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence            99999999999 9987    6899985 5677888999999999999999999999998863    89999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHH-HHHHHHHHHh
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAM  372 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~-f~~~L~~~~~  372 (392)
                      |++|||++.|++.+..+.|.+ ||.|++++|||||+++||+ +++.+.+.+.
T Consensus       512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~~  562 (715)
T TIGR01092       512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRNGLLDDLIDMLR  562 (715)
T ss_pred             ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccchhHHHHHHHHH
Confidence            999999999987777776655 9999999999999999997 5566665554

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=7.4e-34  Score=284.52  Aligned_cols=269  Identities=18%  Similarity=0.170  Sum_probs=197.0

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHH--
Q 016240          102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE----RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR--  175 (392)
Q Consensus       102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~--  175 (392)
                      ..+++..++..+...+  ....++.++..+++.++++.+.    ..+.+..+.+...+|.+..... ..+......++  
T Consensus         4 ~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~   80 (422)
T cd07080           4 APDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRRE   80 (422)
T ss_pred             HHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHH
Confidence            3444444444444333  4456667777777766666664    2334455555555665533321 12222222221  


Q ss_pred             HHHHH-HHhhcC-ccC--CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHH
Q 016240          176 YYAGW-ADKIQG-LTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK  251 (392)
Q Consensus       176 ~~a~~-~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~  251 (392)
                      ..... ...+.. ..+  +...+...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.+
T Consensus        81 ~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~  159 (422)
T cd07080          81 NLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR  159 (422)
T ss_pred             HHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence            01111 111110 000  1112445678899999999999999999 789999999999999999999999999999999


Q ss_pred             HHHHcCCCC----CeEEEE--eCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCC-CcEEEcC
Q 016240          252 LLHEAGLPP----GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK-SPFIVCE  324 (392)
Q Consensus       252 ll~~aGlP~----g~v~vv--~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~-~~~iV~~  324 (392)
                      +|.++ +|+    +.++++  +|.+.++++.|..++  |.|+||||+++++.|++.++. +  +.++|+||| +++|+.+
T Consensus       160 ~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~  233 (422)
T cd07080         160 SLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDR  233 (422)
T ss_pred             HHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecH
Confidence            99999 787    889998  465556888898886  999999999999999999875 4  569999999 5555555


Q ss_pred             CC----CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcc---hHHHHHHHHHHHhcCccCCCC
Q 016240          325 DA----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       325 dA----Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      ++    |++.+++.+++++|.|+||.|+|+++||||+++   +++|.++|.++++++.-..|.
T Consensus       234 ~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~  296 (422)
T cd07080         234 EALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA  296 (422)
T ss_pred             HhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence            68    999999999999999999999999999999999   999999999999987655443

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.94  E-value=7.6e-26  Score=215.30  Aligned_cols=263  Identities=20%  Similarity=0.252  Sum_probs=216.3

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC----hhhhhhhchhHHHHHHHHHH
Q 016240          103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP----FEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus       103 ~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ev~~~~~~l~~~a  178 (392)
                      .++.+..+.|++|..  .+..++.++|.+.|.++++.|+++.++|.++..+|.-..    ..++..+.+...-..++..+
T Consensus         3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma   80 (417)
T COG0014           3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA   80 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence            457778889999988  899999999999999999999999999999887764321    12222223333334444444


Q ss_pred             HHHHhhcCccCC---------CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHH
Q 016240          179 GWADKIQGLTAP---------ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV  249 (392)
Q Consensus       179 ~~~~~~~~~~~~---------~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l  249 (392)
                      .-.+.+-....|         .+.|...+..+.|+||+++|  |..-...++...+-||++||+||+|.+..+..++..+
T Consensus        81 ~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai  158 (417)
T COG0014          81 DGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI  158 (417)
T ss_pred             HHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence            433333222222         44678889999999999999  8778888888899999999999999999999999998


Q ss_pred             HHHHH----HcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          250 SKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       250 ~~ll~----~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      +++++    ++|+|++.||+|+.. ...+.+.|..+..||.|+..|+...-+.|.+.+.    .||+-.+-|+|+++|+.
T Consensus       159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~----vPVi~~~~G~CHiyvd~  234 (417)
T COG0014         159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT----VPVIEHGVGNCHIYVDE  234 (417)
T ss_pred             HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc----CCEEecCcceEEEEecc
Confidence            88754    669999999999873 4556667777888999999999998888777653    69999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcC
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR  374 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~  374 (392)
                      +||+|+|.+.+++++....+ .|++.+.++||+.+.++|+..|.+.+...
T Consensus       235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~  283 (417)
T COG0014         235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA  283 (417)
T ss_pred             cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence            99999999999999999988 99999999999999999999999998854

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.87  E-value=1.9e-21  Score=179.43  Aligned_cols=252  Identities=22%  Similarity=0.256  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------hcCCChhhhhhhchhH-------HH
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPM-------TT  171 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a~~~ev~~-------~~  171 (392)
                      +++..+.||+++.  .+..++.++|.++|.++++.|..+..++..+...      +.|.....  ...+..       ..
T Consensus         2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sl--l~RL~l~~~K~~sl~   77 (433)
T KOG4165|consen    2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESL--LKRLDLSPGKISSLA   77 (433)
T ss_pred             HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHH--HHHhcCChHHHHHHH
Confidence            4566788999998  8999999999999999999999888777766544      44432111  112222       22


Q ss_pred             HHHHHHHHHHHhhcCcc---CCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHH
Q 016240          172 RLFRYYAGWADKIQGLT---APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY  248 (392)
Q Consensus       172 ~~l~~~a~~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~  248 (392)
                      .-++..+...+.+ |..   .....+...+....|+||.++|  |....-.+.....-|++.||.+++|....+..+...
T Consensus        78 ~g~~~ia~~edpv-GRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~  154 (433)
T KOG4165|consen   78 AGLRQIAELEDPV-GRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAA  154 (433)
T ss_pred             HHHHHHHhcccch-hhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHH
Confidence            2233333311111 111   1234577778899999999999  877777788888889999999999999999999999


Q ss_pred             HHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcC
Q 016240          249 VSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE  324 (392)
Q Consensus       249 l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~  324 (392)
                      |.++..++    |.|.+.|++|.. ..++.+.|..+..||.|+..||+...+.|....    .+||..+-.|.+.++|++
T Consensus       155 L~~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~  229 (433)
T KOG4165|consen  155 LHKLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDK  229 (433)
T ss_pred             HHHHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEecc
Confidence            99988776    779999999997 567888888888999999999999988876653    489999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-----chHHHHHHHHH
Q 016240          325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-----VYDQFVEKANA  369 (392)
Q Consensus       325 dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-----i~~~f~~~L~~  369 (392)
                      |||+++|.+.+.++++.+.. .|++.+.++||++     .++++...|++
T Consensus       230 dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~  278 (433)
T KOG4165|consen  230 DADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE  278 (433)
T ss_pred             ccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh
Confidence            99999999999999999986 9999999999996     45555555554

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.67  E-value=2e-14  Score=142.78  Aligned_cols=172  Identities=20%  Similarity=0.206  Sum_probs=143.1

Q ss_pred             eEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC----CeEEEE--eCCc
Q 016240          197 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYG  270 (392)
Q Consensus       197 ~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~----g~v~vv--~g~~  270 (392)
                      .+..+.|.|++++|.|.|.|+..+.. ++.+|++||..|+|+|+..+.++..|.+.|.+. .|.    ..+.++  ++.+
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d  158 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD  158 (399)
T ss_pred             chhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence            66789999999999999999977665 677888999999999999999999999999876 443    456677  3445


Q ss_pred             hhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCC
Q 016240          271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG  350 (392)
Q Consensus       271 ~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~  350 (392)
                      .++.+.+..  ..|+|+.+||.++.+.|.+.+.  ..++.+....-.+..+|..+++++.+++.+..-.+.+.+|.|.|+
T Consensus       159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp  234 (399)
T PF05893_consen  159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP  234 (399)
T ss_pred             hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence            566677764  6899999999999999998543  446666666677888888889999999999999999999999999


Q ss_pred             cEEEEe---CcchHHHHHHHHHHHhcC
Q 016240          351 SRTFVH---ESVYDQFVEKANALAMKR  374 (392)
Q Consensus       351 ~~v~V~---~~i~~~f~~~L~~~~~~~  374 (392)
                      +.|||.   +.-.++|.++|.+++++.
T Consensus       235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~  261 (399)
T PF05893_consen  235 QVIFVETGDGDSVEEFAERLAEALERA  261 (399)
T ss_pred             eEEEEECCCcccHHHHHHHHHHHHHHH
Confidence            999999   345678888887777654

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.79  E-value=4.6e-08  Score=109.08  Aligned_cols=112  Identities=17%  Similarity=0.077  Sum_probs=90.0

Q ss_pred             ccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 016240          187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV  266 (392)
Q Consensus       187 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv  266 (392)
                      ..+|++.|+.+..+..|.|++++|+|||   ..++.++..||++||+||+||++.++.       .+  +.+|..+.+.+
T Consensus      1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905       1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred             ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence            3567888999999999999999999999   557889999999999999999998752       22  23566555555


Q ss_pred             eCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC--ccEEEecC
Q 016240          267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELG  315 (392)
Q Consensus       267 ~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~--~~v~lelg  315 (392)
                           .++..+..+++|++|.|+|++++.+.|.++.+++.+  .|++.|..
T Consensus      1130 -----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905       1130 -----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred             -----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence                 234467778889999999999999999999998653  55666654

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=97.02  E-value=0.0027  Score=71.82  Aligned_cols=104  Identities=13%  Similarity=0.055  Sum_probs=79.1

Q ss_pred             cCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 016240          188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS  267 (392)
Q Consensus       188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~  267 (392)
                      .+|++.|+.+..+..|.|+|+++.+..   ...+.+++.+|++||.+|+..++.   ...    ++  +++|+.+.+.+.
T Consensus      1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809       1172 LLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred             cCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHH----HH--HhccHHHHhHhh
Confidence            577888999999999999999998743   367889999999999998864432   122    22  469998888764


Q ss_pred             CCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCC
Q 016240          268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL  307 (392)
Q Consensus       268 g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~  307 (392)
                      -.   . ........++.|.|.|..+..+.+.++.+++.+
T Consensus      1240 ~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809       1240 LA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred             hc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence            31   1 122233579999999999999999999998653

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=96.37  E-value=0.0065  Score=54.82  Aligned_cols=56  Identities=23%  Similarity=0.252  Sum_probs=47.9

Q ss_pred             CCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcC
Q 016240          317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR  374 (392)
Q Consensus       317 ~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~  374 (392)
                      -+-+||++|.|++.|+..++++.-.--|  ..+.-.|+|||+++|+|+++++.+++.+
T Consensus         5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl   60 (215)
T PF07368_consen    5 PQLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL   60 (215)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC
Confidence            3458999999999999999998855444  5577889999999999999999998765

The function of this family is unknown.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=87.96  E-value=5.9  Score=40.84  Aligned_cols=110  Identities=17%  Similarity=0.190  Sum_probs=75.2

Q ss_pred             cCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 016240          188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS  267 (392)
Q Consensus       188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~  267 (392)
                      .++.+.+..++....|.|-|+++.+   +....+.+++..|++||.+++-+...       ++.++.  .+|.++-..+.
T Consensus       628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~--~l~~~v~~~~~  695 (769)
T COG4230         628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLK--DLPSAVASRIQ  695 (769)
T ss_pred             ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHH--hchhhhhhhee
Confidence            4567778999999999999999855   56777889999999999999965543       222222  25555433332


Q ss_pred             CCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC
Q 016240          268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG  315 (392)
Q Consensus       268 g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg  315 (392)
                      -.++    . ...-.++.+.|-|..+-.+.+.+..+. ...|++.-.+
T Consensus       696 ~~~~----~-~~~~~~~~vl~~gd~~~~r~~~~~iA~-~~Gpiv~~~~  737 (769)
T COG4230         696 VAKD----W-TADIPFDAVLFHGDSDRLRALCEAIAA-RDGPIVSVQG  737 (769)
T ss_pred             eccc----h-hhccceeeEEecCCHHHHHHHHHHHhc-CCCCeEEeec
Confidence            2111    1 333468999999999999999987776 3345544333

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=87.88  E-value=32  Score=34.57  Aligned_cols=168  Identities=19%  Similarity=0.112  Sum_probs=75.1

Q ss_pred             CCCeeEEEecccceEEEEcCC-cccHHHH-HHHHHHHHhcCCEEEE--ecCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 016240          193 GPYHVQTLHEPIGVAGQIIPW-NFPLLMF-AWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG  268 (392)
Q Consensus       193 ~~~~~~~~~~P~GVv~~i~p~-n~P~~~~-~~~~~~ALaaGN~VIl--Kps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g  268 (392)
                      .|......+.|+.-|++..|. .+|+.++ +..++||-.+|..=|+  -|+...-...-.+.-..+.+|+-+  |-.+ |
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G  172 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G  172 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence            356677889999999999994 4555433 5668999999976543  343331122233344455667632  2222 2


Q ss_pred             CchhHHHHHH----cCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC--cEEEcCCCCHHHHHHHHHHHHHhc
Q 016240          269 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS--PFIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       269 ~~~~~~~~l~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~--~~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                       |...-.+|.    +-|.||+|+=-|..=+...=..-... -.+-.   +.|-+  -+|-+++||.+.++..++--+=+.
T Consensus       173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~-V~ID~---~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd  247 (412)
T PF00815_consen  173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD-VGIDM---IAGPSEVLVIADETANPEFVAADLLAQAEHD  247 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS--EES---------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred             -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC-cccCC---CCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence             333333332    24789999988887554321111111 11111   12322  344557899999988887655444


Q ss_pred             cCCcccCCcEEEEeCc--chHHHHHHHHHHHhc
Q 016240          343 QGQCCCAGSRTFVHES--VYDQFVEKANALAMK  373 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~--i~~~f~~~L~~~~~~  373 (392)
                      ..     .+.++|..+  ..++..+.+.+.+..
T Consensus       248 ~~-----a~~vLvt~s~~la~~V~~~v~~~l~~  275 (412)
T PF00815_consen  248 PD-----AQAVLVTTSEELAEAVEAEVERQLEE  275 (412)
T ss_dssp             TT------EEEEEES-HHHHHHHHHHHHHHHTT
T ss_pred             CC-----CceEEEECCHHHHHHHHHHHHHHHHh
Confidence            43     344667554  444444444444443

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>COG1438 ArgR Arginine repressor [Transcription]

Probab=84.75  E-value=9.6  Score=32.65  Aligned_cols=141  Identities=21%  Similarity=0.177  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHH-hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccc
Q 016240          127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG  205 (392)
Q Consensus       127 ~~R~~~L~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G  205 (392)
                      ++|.+.++++...=+ ...+||.+.+..+ |--+.++..             .....++.-..++...+...|....+.|
T Consensus         5 ~~R~~~Ik~iI~~~~i~TQ~Elv~~L~~~-Gi~vTQaTv-------------SRDlkelglvKv~~~~g~~~Y~l~~~~~   70 (150)
T COG1438           5 EERLELIKEIITEEKISTQEELVELLQEE-GIEVTQATV-------------SRDLKELGLVKVRNEKGTYVYSLPAELG   70 (150)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHc-CCeEehHHH-------------HHHHHHcCCEEecCCCCcEEEEeCCccC
Confidence            455554444433211 3457888877654 333555421             2233444444555555555554444444


Q ss_pred             eEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCE
Q 016240          206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK  285 (392)
Q Consensus       206 Vv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~  285 (392)
                      +-    +-..+...+...+...--.||-+|+|..|.   .+..++.++...+.| +.+..|.|++ +            .
T Consensus        71 ~~----~~~~~~~~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGdD-T------------i  129 (150)
T COG1438          71 VP----PTSKLKRYLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGDD-T------------I  129 (150)
T ss_pred             CC----chhhHHHHHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCCC-e------------E
Confidence            32    122232333444555666899999998765   688899999888887 8899898843 2            2


Q ss_pred             EEeeCChHHHHHHHHHh
Q 016240          286 LAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       286 V~ftGs~~~g~~i~~~a  302 (392)
                      .+.+-+.+.++.+.+..
T Consensus       130 lVi~r~~~~a~~l~~~l  146 (150)
T COG1438         130 LVICRSEETAKELYEEL  146 (150)
T ss_pred             EEEecCchhHHHHHHHH
Confidence            33445566666666554

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=83.94  E-value=50  Score=33.16  Aligned_cols=164  Identities=20%  Similarity=0.192  Sum_probs=90.7

Q ss_pred             CCCeeEEEecccceEEEEcC---CcccHHHHHHHHHHHHhcCCEEEE--ecCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 016240          193 GPYHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS  267 (392)
Q Consensus       193 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~ALaaGN~VIl--Kps~~~p~t~~~l~~ll~~aGlP~g~v~vv~  267 (392)
                      .|-.....+.|+--|++..|   .-||-.. +...+||-.+|+.=|+  -|+...- .+-.+.-..+.+|+.+ ++ -+ 
T Consensus       106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStv-LM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy-~v-  180 (425)
T COG0141         106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTV-LMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VY-KV-  180 (425)
T ss_pred             CCcEEEEEEEEhhheEEEccCCCcCChHHH-HHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HH-Hc-
Confidence            46677889999999999999   4555544 4457899999986443  3444321 2222222333445432 11 11 


Q ss_pred             CCchhHHHHHHcC----CCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE-cCCCCHHHHHHHHHHHHHhc
Q 016240          268 GYGPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       268 g~~~~~~~~l~~~----~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV-~~dADl~~a~~~i~~~~~~~  342 (392)
                      | |.....+|.-.    +.||+|.=-|+.=+...  +.... +..-+=+..|-..-+|| ++++|.+..+..++--+=++
T Consensus       181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd  256 (425)
T COG0141         181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD  256 (425)
T ss_pred             c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence            2 33444455443    78999998888754321  11111 21222222233333444 45599999998887655554


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHh
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAM  372 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~  372 (392)
                      ..     .+.|+|..+  ++|.++..+++.
T Consensus       257 ~~-----a~aiLvT~s--~~la~~v~~~v~  279 (425)
T COG0141         257 PD-----AQAILVTDS--EELAEAVEAAVE  279 (425)
T ss_pred             CC-----ceEEEEeCc--HHHHHHHHHHHH
Confidence            33     555777664  344444444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	392
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-120
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		1e-118
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		1e-118
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		1e-118
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-118
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		1e-118
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		1e-117
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-117
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		1e-117
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		1e-115
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-112
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		1e-107
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		1e-103
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		6e-83
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		1e-82
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		3e-82
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		6e-82
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		7e-82
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		4e-81
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		8e-71
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		9e-71
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		6e-70
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-69
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-69
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-68
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		7e-65
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		3e-63
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		4e-61
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-60
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-60
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		1e-60
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		2e-59
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		1e-57
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		1e-55
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-55
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		3e-55
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		1e-54
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		1e-54
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		6e-54
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		3e-53
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		5e-52
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		6e-52
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		6e-52
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		6e-52
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		4e-50
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		3e-49
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		5e-48
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		3e-47
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		2e-45
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		4e-45
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		2e-43
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-40
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		4e-40
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		4e-39
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		8e-38
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		1e-37
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		6e-37
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		2e-36
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		4e-36
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		8e-36
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		1e-35
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		2e-35
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		8e-33
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		2e-32
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		1e-29
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-29
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		2e-29
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		4e-29
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		6e-29
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-28
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		3e-28
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		4e-27
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		5e-27
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		5e-27
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		5e-25
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		4e-24
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		1e-23
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		2e-22
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		6e-20
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		2e-19
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		4e-19
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		2e-18
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-18
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		6e-18
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-17
2y51_A	534	Crystal Structure Of E167a Mutant Of The Box Pathwa		3e-15
2y53_A	534	Crystal Structure Of E257q Mutant Of The Box Pathwa		3e-15
2y52_A	534	Crystal Structure Of E496a Mutant Of The Box Pathwa		3e-15
2vro_A	532	Crystal Structure Of Aldehyde Dehydrogenase From Bu		4e-15
2y5d_A	534	Crystal Structure Of C296a Mutant Of The Box Pathwa		4e-14
3v4c_A	528	Crystal Structure Of A Semialdehyde Dehydrogenase F		4e-11
1eyy_A	510	Crystal Structure Of The Nadp+ Dependent Aldehyde D		2e-07
3my7_A	452	The Crystal Structure Of The Acdh Domain Of An Alco		4e-05

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/332 (61%), Positives = 250/332 (75%), Gaps = 1/332 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
           +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+  DV+RAV AAR AF  G P
Sbjct: 15  EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           W RM A ER +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGW
Sbjct: 75  WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 134
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
           ADK  G T P DG Y   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct: 135 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST  G ++  
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
            A KSNLK VTLE+GGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            +FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDE 346

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 14  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 73
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 74  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 133
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 134 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 193
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 194 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 253
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 254 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 313
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 314 ERSVARAKSRVVGNPFDSKTEQGPQVDE 341

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  420 bits (1079), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AF GST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/328 (60%), Positives = 246/328 (75%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/328 (60%), Positives = 245/328 (74%), Gaps = 1/328 (0%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRM 124
            Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV AAR AF  G PW RM
Sbjct: 20  NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
            A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M  +  RYYAGWADK 
Sbjct: 80  DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
            G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL
Sbjct: 140 HGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST  G+++   A  
Sbjct: 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           SNLK VTL+LGGKSP I+  DAD+D A E AH+ALFFNQGQ C AGSRTFV E +YD+FV
Sbjct: 260 SNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFV 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           E++ A A  RVVG+PF    +QGPQV++
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/336 (55%), Positives = 245/336 (72%), Gaps = 1/336 (0%)
Query: 58  TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
           TP +++ YT++ IN ++ +S SG+ FP  +P TG+ +  V E +  D+++AV AAR AF 
Sbjct: 11  TPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFS 70
Query: 118 EGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
            G  W RM A ER +++ + ADL+ER    +A +E+ + GKPF Q+   ++    +  RY
Sbjct: 71  LGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRY 130
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
           YAGWADKI G+T P DG Y   T HEPIGV GQIIPWNFPLLMF WK+ PAL CGNT+V+
Sbjct: 131 YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVI 190
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
           K AEQTPLSALY+  L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST  GK
Sbjct: 191 KPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGK 250
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
           ++ + A +SNLK VTLELGGKSP I+  DAD+D A E AH  +FFNQGQCC AGSR FV 
Sbjct: 251 LIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVE 310
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           ES+Y++FV+++   A +R+VG PF    +QGPQ+++
Sbjct: 311 ESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDK 346

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/333 (54%), Positives = 239/333 (71%), Gaps = 1/333 (0%)
Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
           ++  YT++ IN ++  S SGK FP  +P T + +  V EG+ EDV++AV AAR+AF  G 
Sbjct: 16  LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PW  M A ER +++ + ADL+ER    +A +E  + GK F  +   ++    +  RY AG
Sbjct: 76  PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKIQG T P DG +   T  EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K A
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPL+AL++  L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST  GK++ 
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           + A KSNLK V+LELGGKSP IV  DAD+D A E AH  +F++QGQCC A SR FV ES+
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           YD+FV ++   A K V+G+P   G+ QGPQ+++
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 348

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/333 (53%), Positives = 236/333 (70%), Gaps = 1/333 (0%)
Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
           +K+ +T+L IN ++ +S SGKTFP  +P T + I  V E + EDV++AV AAR+AF  G 
Sbjct: 16  IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGS 75
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PW  M A ER ++I + ADL+ER    +A LE+ + GK F  +   ++    +  RY AG
Sbjct: 76  PWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAG 135
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           WADKIQG T P DG +   T HEPIGV G I PWN P+++ A K+GPAL CGNT+++K A
Sbjct: 136 WADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           EQTPL+AL+V+ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST  GK++ 
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQ 255
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           + AAKSNLK VTLELG K+P IV  DAD+D A E AH  +F NQGQ C A S+ FV E++
Sbjct: 256 EAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAI 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           YD+FV+++   A K V G+P   G+  GPQ+N+
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINK 348

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  304 bits (779), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 144/327 (44%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+LELGGKSP I+  D D++KA ++   ++FFN+G+ C A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+L+LGGKSP I+  D D++KA ++   ++FFN+G+ C A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+L LGGKSP I+  D D++KA ++   ++FFN+G+ C A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  301 bits (770), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+LELGGKSP I+  D D++KA ++   ++FFN+G+   A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  300 bits (769), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 214/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+LELGGKSP I+  D D++KA ++   ++FFN+G+   A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  298 bits (763), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 213/327 (65%), Gaps = 4/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I G+FVD+   KT+ T++P  G VI  V+  +  DV++AV+AA++AF+ G W ++ A
Sbjct: 38  QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            +R +++ R AD++E+H +E+A +E  D G  +  + +T V M+ + FRY+AGW DKIQG
Sbjct: 98  RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 187 LTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
            T P +   P    TL   EP+GV G +IPWN+PL+M +WK    LA GNT+V+K A+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+AL  ++L  +AG+P GV+NI+ G G   G  L+ H +V K+ FTGST  GK +++  
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A SN+K V+L LGGKSP I+  D D++KA ++   ++FFN+G+   A  R FV ES+++Q
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQ 389
           FV+K      K  +G+P +     GPQ
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  263 bits (673), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 2/330 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           + +  +L I G++V+++SG TF T++P  G+V+  V     EDV RAV +A +   +  W
Sbjct: 2   RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
             MTA +RS+I+ R  D+L   NDE+AALET D GKP  ++   ++     +  YYAG  
Sbjct: 60  AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             I+G   P      V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E 
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL ++++  EAG+P GV N+++G G   G  L  H  ++K++FTG T+TGK V+  
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A+ S+LK VT+ELGGKSP I+  DAD+D+AA++A  A FF+ GQ C  G+R F+H S   
Sbjct: 240 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +F  K      +  +GDP       GP V+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 329

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  263 bits (673), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 2/330 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           + +  +L I G++V+++SG TF T++P  G+V+  V     EDV RAV +A +   +  W
Sbjct: 3   RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
             MTA +RS+I+ R  D+L   NDE+AALET D GKP  ++   ++     +  YYAG  
Sbjct: 61  AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             I+G   P      V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E 
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL ++++  EAG+P GV N+++G G   G  L  H  ++K++FTG T+TGK V+  
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A+ S+LK VT+ELGGKSP I+  DAD+D+AA++A  A FF+ GQ C  G+R F+H S   
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +F  K      +  +GDP       GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  261 bits (666), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           + +  +L I G++V+++SG TF T++P  G+V+  V     EDV RAV +A +   +  W
Sbjct: 2   RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 59
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
             MTA +RS+I+ R  D+L   NDE+AALET D GKP  ++   ++     +  YYAG  
Sbjct: 60  AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 119
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             I+G   P      V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E 
Sbjct: 120 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 179
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL ++++  EAG+P GV N+++G G   G  L  H  ++K++FTG T+TGK V+  
Sbjct: 180 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A+ S+LK VT+ LGGKSP I+  DAD+D+AA++A  A FF+ GQ C  G+R F+H S   
Sbjct: 240 ASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQA 299
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +F  K      +  +GDP       GP V+
Sbjct: 300 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 329

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           + +  +L I G++V+++SG TF T++P  G+V+  V     EDV RAV +A +   +  W
Sbjct: 3   RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
             MTA +RS+I+ R  D+L   NDE+AALET D GKP  ++   ++     +  YYAG  
Sbjct: 61  AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             I+G   P      V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E 
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL ++++  EAG+P GV N+++G G   G  L  H  ++K++FTG T+TGK V+  
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A+ S+LK VT+ELGGKSP I+  DAD+D+AA++A  A FF+ GQ    G+R F+H S   
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +F  K      +  +GDP       GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 197/330 (59%), Gaps = 2/330 (0%)
Query: 62  KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
           + +  +L I G++V+++SG TF T++P  G+V+  V     EDV RAV +A +   +  W
Sbjct: 3   RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVW 60
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
             MTA +RS+I+ R  D+L   NDE+AALET D GKP  ++   ++     +  YYAG  
Sbjct: 61  AAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLV 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
             I+G   P      V T  EP+GV   I  WN+P+ +  WK  PALA GN ++ K +E 
Sbjct: 121 PAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEV 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL ++++  EAG+P GV N+++G G   G  L  H  ++K++FTG T+TGK V+  
Sbjct: 181 TPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A+ S+LK VT+ELGGKSP I+  DAD+D+AA++A  A FF+ GQ    G+R F+H S   
Sbjct: 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQA 300
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +F  K      +  +GDP       GP V+
Sbjct: 301 RFEAKVLERVQRIRLGDPQDENTNFGPLVS 330

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 192/330 (58%), Gaps = 6/330 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           QL I+G++ +       P ++P T ++I  +    AEDV  AV AAR+AF    W   + 
Sbjct: 9   QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
             R+  +   A  +    D    LET D+GKPF++ A  ++      F Y+AG A+ + G
Sbjct: 69  AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDE-AVLDIDDVASCFEYFAGQAEALDG 127
Query: 187 -LTAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
              AP   P   +    L +P+GV G I PWN+PLLM  WK+ PALA G T VLK +E  
Sbjct: 128 KQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELA 187
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
            ++ L   ++ +E GLPPGVLNI++G GP AGA L SH +VDK+AFTGS+ TG  V+  A
Sbjct: 188 SVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASA 247
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A+  +KPVTLELGGKSP +V ED D+DK  E   +  F+  GQ C A SR  VHES+  +
Sbjct: 248 AQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAE 306
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           FV+K         + DPF+ G + GP +++
Sbjct: 307 FVDKLVKWTKNIKISDPFEEGCRLGPVISK 336

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  244 bits (622), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 194/324 (59%), Gaps = 5/324 (1%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
            I G+FV S SG+TFP+LDP T +V+   A G   +V+RA  AA +AF    W R  A E
Sbjct: 30  FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGL 187
           R + +LR A+L+E+H DE+A +E  D G+   +  + +V      F +YA +A+  ++  
Sbjct: 88  RKRYLLRIAELIEKHADELAVMECLDAGQVL-RIVRAQVARAAENFAFYAEYAEHAMEDR 146
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
           T P D  +   T+  P G  G I PWN PL++  W++ PALA GNT+VLK AE +P +A 
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            ++++L EA LPPGV N+V G+G  AGAAL +H  V  L  TG T TGKIV++ AA  +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K ++ ELGGKSP +V  DAD+++A +   + +F   G+ C A SR  V E +++ FV K 
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 368 NALAMKRVVGDPFKGGIQQGPQVN 391
              A    VG P     + GP ++
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIH 349

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 197/324 (60%), Gaps = 5/324 (1%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           I+G++V+SA+  T   ++P   +VI  V+EG  ED  RA+ AAR+AF+ G W + TA  R
Sbjct: 37  IDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETR 96
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
            K +   AD ++ H + +A LET D GK  E+S   ++     +F Y+AG ADK  G   
Sbjct: 97  GKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 190 PADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
            +  P    + + EP+GV  QI PWN+PLL  +WK+ PALA G ++V+K +E TPL+ + 
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
           V +L+ E G P G +N++ G G   G  ++ H EVD ++FTG   TGK +++ AA +N+ 
Sbjct: 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVT 274
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
            + LELGGK+P I+ +DAD + A + A    +F+ GQ C AGSR  V  S+ D+F E+A 
Sbjct: 275 NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF-EQAL 333
Query: 369 ALAMKRV-VGDPFKGGIQQGPQVN 391
              +K++ +G+ F    + GP ++
Sbjct: 334 IDRVKKIKLGNGFDADTEMGPVIS 357

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  231 bits (590), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 192/333 (57%), Gaps = 9/333 (2%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP---WPR 123
           QL ING +      K  P ++P T ++I  +     EDV+ AV+AA+ A        W  
Sbjct: 9   QLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWAT 68
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
            +   R++ +   A  +     E+A LE+ D GKP +++A  ++      F YYA  A+K
Sbjct: 69  ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEK 127
Query: 184 IQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           +     AP   P   +    L EPIGV G I PWN+P+LM  WKV PALA G   +LK +
Sbjct: 128 LDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPS 187
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
           E   L+ L + ++  E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+ TG  ++
Sbjct: 188 ELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
             AA+  +KPV+LELGGKSP +V ED D+DKAAE A +  F+  GQ C A SR  +HES+
Sbjct: 248 TAAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             +F+ +         + DP + G + GP V++
Sbjct: 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSE 339

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 5/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           Q LING+++D+ +G+     +P  GD +  V +  A++   A+ AA +A     W  +TA
Sbjct: 11  QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER+ I+  + +L+  H D++A L T + GKP  + A+ E+        ++A    +I G
Sbjct: 69  KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            T P       +  + +PIGV   I PWNFP  M   K GPALA G T+VLK A QTP S
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L   AG+P GV N+V+G     G  L S+  V KL+FTGST  G+ +++  AK 
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           ++K V+LELGG +PFIV +DAD+DKA E A  + F N GQ C   +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           K      K  +GD    G+  GP +++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDE 333

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 188/327 (57%), Gaps = 5/327 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           Q LING+++D+ +G+     +P  GD +  V +  A++   A+ AA +A     W  +TA
Sbjct: 11  QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER+ I+  + +L+  H D++A L T + GKP  + A+ E+        ++A    +I G
Sbjct: 69  KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 127
Query: 187 LTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
            T P       +  + +PIGV   I PWNFP  M   K GPALA G T+VLK A QTP S
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L   AG+P GV N+V+G     G  L S+  V KL+FTGST  G+ +++  AK 
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           ++K V+LELGG +PFIV +DAD+DKA E A  + F N GQ C   +R +V + VYD+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           K      K  +GD    G+  GP +++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDE 333

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 194/340 (57%), Gaps = 11/340 (3%)
Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
           + V   QL I+G++      K  P ++P T ++I  +     EDV+ AV AA++A     
Sbjct: 3   ITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKN 62
Query: 120 --PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
              W   +   R++ +   A  ++   DE+  LE+ D GKP E+ A  ++      F YY
Sbjct: 63  GRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEE-ALADLDDVVACFEYY 121
Query: 178 AGWADKIQG-----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232
           AG A+++       ++ P D  +    L EPIGV   I PWN+P LM  WK+ PALA G 
Sbjct: 122 AGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGC 180
Query: 233 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
             +LK +E   ++ L + ++  E GLP GVLNIV+G G  AGA+LASH +VDK++FTGS+
Sbjct: 181 AAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSS 240
Query: 293 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
            TG  ++  AA+  +KPV+LELGGKSP +V ED D+DK AE   +  FF  GQ C A SR
Sbjct: 241 ATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSR 299
Query: 353 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             VHES+  +FV+K    A    + DP + G + GP V++
Sbjct: 300 LIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSE 339

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  226 bits (576), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 189/327 (57%), Gaps = 11/327 (3%)
Query: 72  GQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
           G+ + S  G T  P  +P TG V+  +    AE+V++AV +A+ A+ +  W +M   ERS
Sbjct: 26  GRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGIERS 83
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
           +++L  A ++    D IA LE  +NGK   + A+ ++    +   YYAG A  + G    
Sbjct: 84  RVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 191 ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250
             G     T  EP+GV   I+ WN+P ++ AWK  PALACGN +V K +  TP++ + ++
Sbjct: 143 LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 251 KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
           ++ HEAG+P G++N+V G G   G+ L  H  V K++FTGS  TGK V++++AK+ +K V
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-VKHV 260
Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
           TLELGGKSP ++ +D +++ A   A  A F  QGQ C  G+R FV   +  QF+E+    
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 371 AMKRVVGDPF-----KGGIQQGPQVNQ 392
               VVGDP       GG+   PQ+++
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDK 347

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/340 (40%), Positives = 193/340 (56%), Gaps = 9/340 (2%)
Query: 60  PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
           P  V   QL ++G++   A G+  P ++P T   I  +  G AEDV+ AV+AAR A    
Sbjct: 19  PAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRN 78
Query: 120 ---PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
               W R     R+K +   A  +     E+A LE  D GKP++++A  ++      F Y
Sbjct: 79  RGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCFEY 137
Query: 177 YAGWADKI-QGLTAPADGPYHVQTLH---EPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232
           +A  A+ + +   +P   P      H   EPIGV G I PWN+PLLM  WK+ PALA G 
Sbjct: 138 FADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGC 197
Query: 233 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
           T VLK +E   ++ L ++ +  E GLP GVLNIV+G GP AGA L++H +VDK+AFTGS 
Sbjct: 198 TAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSF 257
Query: 293 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
            TGK ++  AA   +KPVTLELGGKSP +V +D D+DKA E   +  F+  GQ C A SR
Sbjct: 258 ETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSR 316
Query: 353 TFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             +H  +  +F E+  A A    V DP + G + GP V++
Sbjct: 317 LLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSE 356

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  213 bits (542), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/303 (40%), Positives = 176/303 (58%), Gaps = 12/303 (3%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           TQLLI  +F ++ +      L+PRTG  I  +AE     ++ AV AA +AF    W + T
Sbjct: 26  TQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             ERS  +L+ AD +E+  DE AALE  + GKP       E+P     +R++AG    ++
Sbjct: 83  PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAG---AVR 139
Query: 186 GLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
            L APA G Y   H   +  +PIG+ G I PWN+PL   AWK+ PA+  GNT+V K +EQ
Sbjct: 140 NLHAPAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQ 199
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TPL+AL +++L+ +  LP GV+N+++G G T G AL +H +V  ++ TG   TGK VL  
Sbjct: 200 TPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           AAK+ +K   LELGGK+P IV  DAD++          ++N GQ C A  R +    +Y+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 362 QFV 364
           + V
Sbjct: 318 KLV 320

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  213 bits (541), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/343 (38%), Positives = 187/343 (54%), Gaps = 7/343 (2%)
Query: 54  EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
           +DP    V +   QL I G++ +       P ++P T ++I  +    AEDV+ AV AAR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
           KA     W   T  +R+K +   A  +      +A LE+ D+GK   +SA  ++      
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
           F YYAG A+ +      P +     Y    L EP+GV G I PWN+PLLM  WKV PALA
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
            G   +LK +E   ++ L + ++  E GLP G LNI++G GP AG  LASH  VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 348
           GS  TG  ++  AA+  +KPV+LELGGKSP +V +D D +D AAE   + +F N GQ C 
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           A SR  V E++   F+++         + DP +   + GP V+
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVS 352

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 201/334 (60%), Gaps = 5/334 (1%)
Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
           +K  Y Q L++G+ VD+ASG T   + P   G+V+    E  A+DV +AV+AARKAFD G
Sbjct: 19  IKSRY-QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG 77
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
           PWPR +  ERS++  + ADL+    +E+A +E+ + GKP  Q A+ E+     L+ Y AG
Sbjct: 78  PWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQ-ARGEIGFCADLWSYAAG 136
Query: 180 WADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
            A  ++G T    G   +   L EP+GV G I PWNFP ++ + +V  A+  G T+VLK 
Sbjct: 137 QARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKP 196
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
           +E T  +++ +++L  EAG+P GV N+V+GYG  AG  LA    VD +AFTGS   G  +
Sbjct: 197 SEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKL 256
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
            ++AA++ +K V LELGGK P IV  DAD+D AA+   Y ++ N GQCC +GSR  V E 
Sbjct: 257 GEIAART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEG 315
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + D   E+   ++ K   GDP     + G  +++
Sbjct: 316 IRDALXERLLDISRKVAFGDPLNERTKIGAXISE 349

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/343 (37%), Positives = 186/343 (54%), Gaps = 7/343 (2%)
Query: 54  EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
           +DP    V +   QL I G++ +       P ++P T ++I  +    AEDV+ AV AAR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
           KA     W   T  +R+K +   A  +      +A LE+ D+GK   +SA  ++      
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESA-ADMDDVAGC 130
Query: 174 FRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
           F YYAG A+ +      P +     Y    L EP+GV G I PWN+PLLM  WKV PALA
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
            G   +LK +E   ++ L + ++  E GLP G LNI++G GP AG  LASH  VDK++FT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCC 348
           GS  TG  ++  AA+  +KPV+L LGGKSP +V +D D +D AAE   + +F N GQ C 
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           A SR  V E++   F+++         + DP +   + GP V+
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVS 352

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  209 bits (533), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 184/323 (56%), Gaps = 6/323 (1%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           +LLING+ V S  G+  P  +P TGDV+  +AE  AE V+ AV AA  AF E  W + T 
Sbjct: 25  KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTP 81
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
             R++ +L+ AD++E +    A LE+ + GKP   +   E+P    +FR++AG A  + G
Sbjct: 82  KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 187 LTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           L A      H   +  +P+GV   I PWN+PL+M AWK+ PALA GN +VLK +E TPL+
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           AL +++L  +   P GV+NI+ G G T G  L  H +V  ++ TGS  TG+ ++   A S
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-S 259
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
           ++K   +ELGGK+P IV +DAD++   E      ++N GQ C A  R +  + +YD  VE
Sbjct: 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 319
Query: 366 KANALAMKRVVGDPFKGGIQQGP 388
           K  A       G P     + GP
Sbjct: 320 KLGAAVATLKSGAPDDESTELGP 342

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  207 bits (528), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 182/328 (55%), Gaps = 7/328 (2%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAE-GEAEDVNRAVSAARKAFDEGPWPRMT 125
           Q  I G++  + S  TF   DP TG+ +  V + G AE      +A         W   T
Sbjct: 14  QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG---WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+ R+ DL+  ++D++A + T + GKP  + A+ E+        ++A    ++ 
Sbjct: 71  AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G T P  D    +  + EPIGV   I PWNFP  M A KVGPALA G  IV+K AE TP 
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           SAL ++ L   AG+P GVL++V G     G  + S+  V KL+FTGST  G++++  +A 
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           + +K +TLELGG +PFIV +DAD+D A E A  + + N GQ C   +R FVHE VYD F 
Sbjct: 250 T-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +K  A   K  VG   + G   GP +N+
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINE 336

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 178/325 (54%), Gaps = 6/325 (1%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
            I+G +V+  +G  F ++ P TG++I  +       V RA+++A++A  E  W  M+   
Sbjct: 18  FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKE--WAAMSPMA 75
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGL 187
           R +I+ R AD++   ND ++ LET D GKP +++   +       F ++ G A   + G 
Sbjct: 76  RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
             P  G +   T   P+GV   I  WN+P  +  WK  PAL  GN +V K +E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            ++++L EAGLP G+ N++ G   T G  L +H +V K++ TGS  TG+ V   AA  +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKV-AAAAAGHL 252
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K VT+ELGGKSP IV +DAD++ A   A    F++ GQ C  G+R FV +    +F+E  
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
                  ++GDP       GP V++
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSK 337

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  201 bits (512), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           + I+GQFV          ++P T  VI+ + +G+AED  +A+ AA +A  E  W  + A 
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER+  + + +  +     EI+AL   + GK  +Q A+ EV  T     Y A WA + +G 
Sbjct: 67  ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
              +D P  ++      +GV   I+PWNFP  + A K+ PAL  GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           +  +K++ E GLP GV N+V G G T G  LA + +V  ++ TGS + G+ ++  AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           +  V LELGGK+P IV +DAD++ A +    +   N GQ C    R +V + +YDQFV +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
                     G+P  +  I  GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           + I+GQFV          ++P T  VI+ + +G+AED  +A+ AA +A  E  W  + A 
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER+  + + +  +     EI+AL   + GK  +Q A+ EV  T     Y A WA + +G 
Sbjct: 67  ERASWLRKISAGIRERATEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
              +D P  ++      +GV   I+PWNFP  + A K+ PAL  GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           +  +K++ E GLP GV N+V G G T G  LA + +V  ++ TGS + G+ ++  AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           +  V LELGGK+P IV +DAD++ A +    +   N GQ C    R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
                     G+P  +  I  GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           + I+GQFV          ++P T  VI+ + +G+AED  +A+ AA +A  E  W  + A 
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAI 66
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           ER+  + + +  +     EI+AL   + GK  +Q A+ EV  T     Y A WA + +G 
Sbjct: 67  ERASWLRKISAGIRERASEISALIVEEGGK-IQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
              +D P  ++      +GV   I+PWNFP  + A K+ PAL  GNTIV+K +E TP +A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
           +  +K++ E GLP GV N+V G G T G  LA + +V  ++ TGS + G+ ++  AAK N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-N 244
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           +  V LELGGK+P IV +DAD++ A +    +   N GQ C    R +V + +YDQFV +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 367 ANALAMKRVVGDPF-KGGIQQGPQVN 391
                     G+P  +  I  GP +N
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLIN 330

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/328 (37%), Positives = 186/328 (56%), Gaps = 5/328 (1%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           +Q L+NG+++D+A G T    +P  G VI  V       +  A+ A+ KA     W   T
Sbjct: 33  SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+ ++ DL+  + D+IA + T + GKP  + A+ EV        ++A  A ++ 
Sbjct: 91  AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G T PA      +  + +P+GV   I PWNFP  M   K  PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +AL +  L  +AG+P GVL IV+G     GA L S+  V KL+FTGST  G++++   A 
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           + +K ++LELGG +PFIV +DAD+D A + A  + + N GQ C   +R +V   VYD+F 
Sbjct: 270 T-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           EK  A   +  VG+  + G+  GP + +
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEE 356

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  195 bits (495), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 170/325 (52%), Gaps = 5/325 (1%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
            I GQ+V S    T   L P TG VI  +  G   D   A+  A+ A     W ++TA  
Sbjct: 16  FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLTART 73
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R  ++  FA+ +  +   +A +   + GK     A+ EV +T     Y    A  I+G  
Sbjct: 74  RQNMLRTFANKIRENKHILAPMLVAEQGKLL-SVAEMEVDVTATFIDYGCDNALTIEGDI 132
Query: 189 APADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
            P+D       +H+ P GV   I  WNFPL +   K+GPAL  GNT+VLK  ++TPL+  
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            + ++  EAGLP GVLN+++G G   G  L        +  TGST  GK + + +A+  +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY-M 251
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
            PV LELGGK+P +V +DAD+DKAAE A +  F N GQ C    R +VH SVYD+F+ K 
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
             L     VGDP     Q GP+ NQ
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQ 336

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/334 (38%), Positives = 197/334 (58%), Gaps = 15/334 (4%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           T   + G+++ +A+  TFP  DP +G  +  VA+    +   AV AA +AF    W  ++
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A  E+  +     +++  A ++ 
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
           G  +  PA        L +PIGVA  I PWNFP  M   KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 300
            SAL +++L  +AG+P GV N++      A   G A+ +   V K++FTGSTTTGKI+L 
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
            AA S +K V++ELGG +PFIV + A+VD+A   A  + F N GQ C   ++  V   ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 361 DQFVEKANALAMKR--VVGDPFKGGIQQGPQVNQ 392
           D FV KA A AMK+   VG+ F+ G  QGP +N+
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINE 338

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/334 (38%), Positives = 196/334 (58%), Gaps = 15/334 (4%)
Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           T   + G+++ +A+  TFP  DP +G  +  VA+    +   AV AA +AF    W  ++
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A  E+  +     +++  A ++ 
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 G--LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
           G  +  PA        L +PIGVA  I PWNFP  M   KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAK-DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTA---GAALASHMEVDKLAFTGSTTTGKIVLQ 300
            SAL +++L  +AG+P GV N++      A   G A+ +   V K++FTGSTTTGKI+L 
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
            AA S +K V++ELGG +PFIV + A+VD+A   A  + F N GQ     ++  V   ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 361 DQFVEKANALAMKR--VVGDPFKGGIQQGPQVNQ 392
           D FV KA A AMK+   VG+ F+ G  QGP +N+
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINE 338

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 174/329 (52%), Gaps = 7/329 (2%)
Query: 64  DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
           DYT+  ING++V+S S +T   ++P T +VI  VA+G   DV++AV AA   + E  +  
Sbjct: 6   DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
            +  ER  ++ +     E   D+I    T + G P   S +         F       D 
Sbjct: 64  TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
            +      D       + E IGV+G I PWNFP    + K+  A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            +A+ ++++  + G+P GV N+V+G G   G  L+ H +V   +FTGS  TG  + + AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
           K + K V+LELGGKSP+IV +D D+ +AA+     +  N GQ C AG+R  V   + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + +      +  VG+P + G Q GP +++
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISK 327

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 179/334 (53%), Gaps = 4/334 (1%)
Query: 59  PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
           P   ++  +  ING + D ++      +DP T +    ++ G   D ++A++AA+KAF  
Sbjct: 19  PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ- 77
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
             W   + +ER   + +  ++ E+ + ++A   + + G P + +   +    +   R + 
Sbjct: 78  -TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFI 136
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
               +     A  +G       ++ IGV G I PWN+P+     KV PAL  G T+VLK 
Sbjct: 137 KAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKP 196
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
           +E  PLSA+  +++L EA LP GV N+++G G   G+ L++H +++ ++FTGST  GK +
Sbjct: 197 SEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
            + A+ + LK V LELGGK   I+  DAD+D A +      F+N GQ C A +R  V ++
Sbjct: 257 SKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +YD+ ++ A  +A K  VG   + G   GP V++
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSK 348

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 63  VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           +D T+ LI GQ+V+  S +    ++P    VI    +    DV+ A  AA+KA  +  W 
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA--QAEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
              A ERS II R A+LLE H +EI      ++G      A  E+ +   + +  A +  
Sbjct: 68  ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGST-RSKANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           ++ G  +P++ P     ++    GV G I PWNFPL +    V PALA GN +V+K A  
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 242 TPLSALYV-SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           TP++   + +++  EAG+P GV++ V+G G   G    +H     ++FTGST  G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 301 LAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           LA     +K V LELGG +PF+V  DAD+D AA+ A    F +QGQ C + +R  V  +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
           +D+F+EK          GDP   G   GP +N
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIN 338

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/330 (36%), Positives = 168/330 (50%), Gaps = 4/330 (1%)
Query: 64  DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
           +Y +L I G++   ++        P TG+ +  V    A DV+ AV+AAR AFD GPWP 
Sbjct: 7   EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
              +ER+ +I     +L    D    L   + G+P           +     Y+AG ADK
Sbjct: 67  TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 184 IQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
           +   T    G Y    +  EP+GV G I+ WN PL +   K+ PAL  G TIVLK A +T
Sbjct: 127 VT-WTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+A  ++++  E GLP GVL++V G G   G AL S+ ++D   FTGS+  G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A+  LKP TLELGGKS  I+ ED D+  A  +  ++   N GQ C   +R     S YD+
Sbjct: 245 AEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            V           VG P     Q GP +++
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISE 333

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 167/325 (51%), Gaps = 7/325 (2%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD-EGPWPRMTAYE 128
           I G++ DSA G TF   +P TG VI  V     EDV  AV A + A     PWP  T   
Sbjct: 16  IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET--- 72
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R K +    D L+ + +EI  +   ++GKP+++ AQ EV      F Y A     +   T
Sbjct: 73  RRKWLEDIRDGLKENREEIGRILCXEHGKPWKE-AQGEVDYAAGFFDYCAKHISALDSHT 131
Query: 189 APADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
            P        T+H  P+GV G I+PWNFP+   A K+  ALA G   V+K A +TPL+ +
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXI 191
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
               +  +  LP G +N+V G     G  L  H +V  L+FTGST  G+ ++   A+  +
Sbjct: 192 AFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAE-QV 250
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
           K + LELGG +PFIV +DAD++ AA+      F   GQ C   +R FVHE V D F +K 
Sbjct: 251 KKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKL 310
Query: 368 NALAMKRVVGDPFKGGIQQGPQVNQ 392
                K  VGD    GI  GP +N+
Sbjct: 311 AERVNKXTVGDGXNDGIDIGPLINK 335

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 172/336 (51%), Gaps = 20/336 (5%)
Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+ING+ V +       + +P R   ++  V++   +   +A+ +A +AF    W  +  
Sbjct: 40  LIINGERVTTED--KIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNP 95
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
            ER+ I+++ A ++ R   E +A    + GKP+++ A  +         YYA    ++  
Sbjct: 96  EERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADTAEAIDFLEYYARQMIELNR 154
Query: 185 --QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQ 241
             + L+ P +   +  T   P+GV   I PWNF L +M    V P +  GNT+VLK A  
Sbjct: 155 GKEILSRPGEQNRYFYT---PMGVTVTISPWNFALAIMVGTAVAP-IVTGNTVVLKPAST 210
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           TP+ A    ++L +AGLP GV+N V G G   G  L  H +   + FTGS   G  + + 
Sbjct: 211 TPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 302 AA-----KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
           AA     +++LK V +E+GGK   +V  DAD+D AAE    + F   GQ C AGSR  +H
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + VYD+ +EK  ALA    VGDP       GP +++
Sbjct: 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDE 366

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 12/319 (3%)
Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
            +L NG++V+S +G+      P +G  +  +     E+VN A+  A+ A  +  W     
Sbjct: 13  NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPI 70
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
           +ER  ++  +ADLLE   + I  L   +  KP ++SA  EV  T  + R+ A  A ++ G
Sbjct: 71  HERVDLLYAWADLLEERKEIIGELIMHEVAKP-KKSAIGEVSRTADIIRHTADEALRLNG 129
Query: 187 LTAPAD----GPYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
            T   D    G      L   EP+GV   I P+N+P+ + A K+ PAL  GNT+V K A 
Sbjct: 130 ETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           Q  LS + + + L +AG P G++ +V+G G   G  L  H  +D + FTG TTTG+   +
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE---R 246
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           ++ K+ + PV LELGGK P IV +DAD+   A       F   GQ C A  R FV +SV 
Sbjct: 247 ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 361 DQFVEKANALAMKRVVGDP 379
           DQ V     L  +  VG P
Sbjct: 307 DQLVANIKELVEQLTVGSP 325

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L+I+G+  ++ +     +++P    +V+  V++   +   +A+ AA KAF+   W     
Sbjct: 40  LVIDGERYETEN--KIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDP 95
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-Q 185
            ER+ ++ R    + R   E +AL   + GKP+ + A  +         YYA    ++ +
Sbjct: 96  EERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNE-ADADTAEAIDFMEYYARQMIELAK 154
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           G    +      Q ++ P GV   I PWNF   + A      +  GNT+VLK A   P+ 
Sbjct: 155 GKPVNSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVI 214
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 304
           A    ++L E+GLP GV+N V G G   G  L  H +   + FTGS   G  + + AAK 
Sbjct: 215 AAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKV 274
Query: 305 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
               ++LK V  E+GGK   +V ED D++ AA+    + F   GQ C AGSR  VHE VY
Sbjct: 275 QPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVY 334
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           D+ +++   +   + VG+P    +  GP ++Q
Sbjct: 335 DEVLKRVIEITESKKVGEPDSADVYMGPVIDQ 366

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
            ING++    SG+T   L+P    VIT  +    + +  A   A+KA  E  W + T  +
Sbjct: 10  FINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAKSTTED 67
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R  ++ +    L  + D+I  +   + G    +S   E+  T  +      +  ++ G+ 
Sbjct: 68  RKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVK 126
Query: 189 -APADGPYHVQTLHE-PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
             P+D       ++  P+GV   I P+NFP+ +    + PA+A GN++V K   QT +S 
Sbjct: 127 EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISG 186
Query: 247 -LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
              ++K    AGLP GVLN++       G  + ++     ++FTGST  G+ + ++A ++
Sbjct: 187 GTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             K + LELGG +PF V  DADVD+A + A +  F +QGQ C   +R  VH+ VYD+FVE
Sbjct: 247 -FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 366 KANALAMKRVVGDPFKGGIQQGPQVNQ 392
           K  A   +   GD        GP +N+
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINE 332

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 167/327 (51%), Gaps = 14/327 (4%)
Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           + I+G++++    +    ++P + +VI  +     E+   A+  A K   +     +   
Sbjct: 2   MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKY--KEVMKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           +R  I++  A  ++   +E+A +   D GKP +Q A+ EV  +   F+  A +  + +  
Sbjct: 57  KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
             P+D    + T  EP+G+ G I P+NFPL + A K+ PA+A GN IV   + + PL  +
Sbjct: 116 VIPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            ++K++  A     +P GV N+++G G   G  +  + +V+ ++FTGS+  G+++ +   
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK--- 231
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
           K+  K + LELGG +P IV +DAD++KA        F   GQ C +     V ES+ D+F
Sbjct: 232 KAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQV 390
           +E     A    VG+P       GP +
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLI 318

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 160/317 (50%), Gaps = 16/317 (5%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           +NG++    S       +P +G  +  V     E+V+   ++A+KA  +  W  ++  ER
Sbjct: 9   VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           +  + + AD+L R  ++I A+ + +  K + +SA +EV  T  +  Y A    +++G   
Sbjct: 65  AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
              G +   +         EP+G+   I P+N+P+ +   K+ PAL  GN I  K   Q 
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
            +S L +++   EAGLP GV N ++G G   G  +  H  V+ + FTGST  G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
               ++P+ LELGGK   IV EDAD++  A+      F   GQ C A  R  V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
            VEK     +   +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 16/317 (5%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           +NG++    S       +P +G  +  V     E+V+   ++A+KA  +  W  ++  ER
Sbjct: 9   VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           +  + + AD+L R  ++I A+ + +  K + +SA +EV  T  +  Y A    +++G   
Sbjct: 65  AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
              G +   +         EP+G+   I P+N+P+ +   K+ PAL  GN I  K   Q 
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
            +S L +++   EAGLP GV N ++G G   G  +  H  V+ + F+GST  G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
               ++P+ LELGGK   IV EDAD++  A+      F   GQ C A  R  V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
            VEK     +   +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  147 bits (372), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 16/317 (5%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           +NG++    S       +P +G  +  V     E+V+   ++A+KA  +  W  ++  ER
Sbjct: 9   VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           +  + + AD+L R  ++I A+ + +  K + +SA +EV  T  +  Y A    +++G   
Sbjct: 65  AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
              G +   +         EP+G+   I P+N+P+ +   K+ PAL  GN I  K   Q 
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
            +S L +++   EAGLP GV N ++G G   G  +  H  V+ + FTGST  G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
               ++P+ L LGGK   IV EDAD++  A+      F   GQ C A  R  V ESV D+
Sbjct: 243 G---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
            VEK     +   +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 6/324 (1%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           ING++V+S + +    ++P T +V+  V     ED++ A   A +AF    W ++    R
Sbjct: 10  INGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRR 67
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT- 188
           ++I+  F  LL +H +E+A L T +NGK  ++ A  EV        + AG    + G + 
Sbjct: 68  ARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMMGDSL 126
Query: 189 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
           A             PIGV G I P+NFP+++  W    A+A GNT +LK +E+TPL    
Sbjct: 127 ASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
           + +L  +AGLP GV N+V G        L  H E+  ++F GS   G+ V +  ++ NLK
Sbjct: 187 LVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYKKGSE-NLK 244
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
            V    G K+  IV  DA+++        A F + G+ C A +   V E + D+F+ K  
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 369 ALAMKRVVGDPFKGGIQQGPQVNQ 392
                  +G+    G+  GP + +
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIRE 328

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 16/317 (5%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           +NG++    S       +P +G  +  V     E+V+   ++A+KA  +  W  ++  ER
Sbjct: 9   VNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSYIER 64
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
           +  + + AD+L R  ++I A+ + +  K + +SA +EV  T  +  Y A    +++G   
Sbjct: 65  AAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 190 PADGPYHVQT-------LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
              G +   +         EP+G+   I P+N+P+ +   K+ PAL  GN I  K   Q 
Sbjct: 124 EG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
            +S L +++   EAGLP GV N ++G G   G  +  H  V+ + FTGST  G+ + ++A
Sbjct: 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
               ++P+ LELGGK   IV EDAD++  A+      F   GQ   A  R  V ESV D+
Sbjct: 243 G---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADE 299
Query: 363 FVEKANALAMKRVVGDP 379
            VEK     +   +G+P
Sbjct: 300 LVEKIREKVLALTIGNP 316

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score =  137 bits (346), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 156/325 (48%), Gaps = 18/325 (5%)
Query: 70  INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
           I GQ++ +  G+T  +LDP    V+      +A  V+ AV AAR+AF    W R    +R
Sbjct: 10  IAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRPLEQR 66
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
            +++ RFA  L+   DE+A +   + GKP  +SA TEV   T      A      +  T 
Sbjct: 67  IELLERFAATLKSRADELARVIGEETGKPLWESA-TEV---TSXVNKVAISVQAFRERTG 122
Query: 190 PADGPYHVQTL---HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
              GP    T    H+P GV     P+NFP  +    + PAL  GN +V K +E TP  A
Sbjct: 123 EKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVA 182
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
               K   +AGLP GVLN+V G G   G ALA+H  +D L FTGS+ TG ++        
Sbjct: 183 ELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQP 241
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
            K + LE GG +P +V E AD+D A      + F + GQ C    R  V +  + D  + 
Sbjct: 242 QKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLA 301
Query: 366 KANALAMKRVVGD------PFKGGI 384
           +  A++    VG       PF G +
Sbjct: 302 RLVAVSATLRVGRFDEQPAPFXGAV 326

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 14/324 (4%)
Query: 71  NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
           NG +    SG+   +  P   + I  V +    +    V   R+A+    W  + A +R 
Sbjct: 27  NGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRG 82
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
           +I+ +  D L +    + +L + + GK + +    EV     +  Y  G +  I G   P
Sbjct: 83  EIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV-GEVQEYVDVCDYAVGLSRMIGGPVLP 141
Query: 191 ADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
           ++ P H       P+G+ G I  +NFP+ ++ W    AL CGN  + K A  TPL+++ V
Sbjct: 142 SERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAV 201
Query: 250 SKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           +K+    L +  LP  + ++  G G   G A+A    VD L+FTGST  GK+V  +  + 
Sbjct: 202 TKIVAEVLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQER 260
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
             + + LELGG +  IV EDAD++     A +A     GQ C    R  +HESV+D  VE
Sbjct: 261 FGRKL-LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVE 319
Query: 366 KANALAMKRV-VGDPFKGGIQQGP 388
           +  A A K+V +GDP+      GP
Sbjct: 320 RI-AKAYKQVRIGDPWDPSTLYGP 342

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+    +RS+++L+ A L+ R   E+ A   ++ GK + + A  +V        YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
           A + +   A    PY     ++ + P+G    I PWNFP+ +F   +   +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
            AE   +    V ++ HEAG PPGV+N + G G   GA L  H  +  + FTGS   G  
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
           + + A +     +  K   +E GGK+  IV E AD D AAE    + +  QGQ C A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
             + +  Y+  +E+    A +  VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+    +RS+++L+ A L+ R   E+ A   ++ GK + + A  +V        YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
           A + +   A    PY     ++ + P+G    I PWNFP+ +F   +   +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
            AE   +    V ++ HEAG PPGV+N + G G   GA L  H  +  + FTGS   G  
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
           + + A +     +  K   +E GGK   IV E AD D AAE    + +  QGQ C A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
             + +  Y+  +E+    A +  VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 80  GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
           G+   T  P   + I  V +    D    V  AR+A+    W  + A +R +I+ +  D 
Sbjct: 36  GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
           L      + +L + + GK   +    EV     +  Y  G +  I G   P++   H   
Sbjct: 94  LREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALI 152
Query: 200 LH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LH 254
               P+G+ G I  +NFP+ ++ W    A+ CGN  + K A  T L ++ V+K+    L 
Sbjct: 153 EQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLE 212
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
           +  LP  + ++  G G   G A+A    V+ L+FTGST  GK V  L  +       LEL
Sbjct: 213 DNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV-GLMVQERFGRSLLEL 270
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
           GG +  I  EDAD+      A +A     GQ C    R F+HES++D+ V +      + 
Sbjct: 271 GGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQI 330
Query: 375 VVGDPFKGGIQQGP 388
            VG+P+   +  GP
Sbjct: 331 RVGNPWDPNVLYGP 344

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 133/276 (48%), Gaps = 8/276 (2%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           W R  A  R+  + + A LLE  +    AL   + GK  +  A +E+       RYYA  
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLD-DALSELREAADFCRYYAAQ 624
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
             K+ G      GP    +  T+    GV   I PWNFPL +F  +V  AL  GN++V K
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRGR-GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAK 683
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK- 296
            AEQTP  A     LLHEAG+P   L +V+G G   GAAL +H ++  + FTGST   + 
Sbjct: 684 PAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARS 742
Query: 297 IVLQLAAKSN-LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 355
           I   LAAK   + P+  E GG +  I    A  ++ A+    + F + GQ C A    FV
Sbjct: 743 INRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFV 802
Query: 356 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN 391
            E V D+ +E     A +  +GDP       GP ++
Sbjct: 803 QEDVADRMIEMVAGAARELKIGDPSDVATHVGPVID 838

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score =  125 bits (313), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 162/317 (51%), Gaps = 12/317 (3%)
Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           L ING+ V   +    PT++P +  +V+  + +    +V  A++AA+ AF    W     
Sbjct: 534 LFINGKEV--RTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDP 589
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
             R++ +L+ A    +   E++A +  + GK ++Q A  +V        YYA    ++  
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQ 648
Query: 187 LTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
                  P  +    +EP GVA  I PWNFPL +       A+  GN +V K +  T + 
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 304
             ++ +L  EAGLP GV N   G G   G  L  H ++  +AFTGS  TG  +++ AAK 
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 305 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
               +N+K +  E+GGK+  I+ +DAD+D+A     Y+ F  QGQ C A SR  V ++VY
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 361 DQFVEKANALAMKRVVG 377
           D+F+E+  ++A    VG
Sbjct: 829 DKFIERLVSMAKATKVG 845

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 7/300 (2%)
Query: 83  FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
           + +++P T +         ++ ++ A++ A   + +  W       R++I+   A+ L+ 
Sbjct: 6   YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE 202
           H DE+A   T + GK   +S + EV +   +  YYA    +    T       +   L +
Sbjct: 64  HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQ 122
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG- 261
             GV     PWNFPL        P    GN I+LK A   P SA   +K++  AG P G 
Sbjct: 123 STGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS 182
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           ++N+   Y   A   + +   +  +A TGS   G  V + A K NLK  T ELGG   FI
Sbjct: 183 LINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFI 239
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V +DAD      + + A  +N GQ C +  R  V +S YD+ + +   +      GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 13/265 (4%)
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
           WP+    +RS+++L+ A L+ R   E+ A   ++ GK + + A  +V        YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARA 148
Query: 181 ADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237
           A + +   A    PY     ++ + P+G    I PWNFP+ +F   +   +A GNT++ K
Sbjct: 149 ALRYR-YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
            AE   +    V ++ HEAG PPGV+N + G G   GA L  H  +  + FTGS   G  
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 298 VLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR 352
           + + A +     +  K   +E GGK   IV E AD D AAE    + +  QGQ   A SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASR 327
Query: 353 TFVHESVYDQFVEKANALAMKRVVG 377
             + +  Y+  +E+    A +  VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79  SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
           SG+      P     I  V     E+V R +      F  G W    M   ER  ++ + 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
           AD++ER+ D  A +   + GKP + +A  EV       R       KI G   P D  Y 
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
                     EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A    K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
            L +AG PP  + +++  G  A   +A    V  ++FTGST  G+ V+++     +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
           +ELGG  P IV EDAD+D AA+     ++   GQ C A         VY + VE+     
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
               VGDP    +  GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79  SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
           SG+      P     I  V     E+V R +      F  G W    M   ER  ++ + 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
           AD++ER+ D  A +   + GKP + +A  EV       R       KI G   P D  Y 
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
                     EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A    K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
            L +AG PP  + +++  G  A   +A    V  ++FTGST  G+ V+++     +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
           +ELGG  P IV EDAD+D AA+     ++   GQ C A         VY + VE+     
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
               VGDP    +  GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 15/320 (4%)
Query: 79  SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP--RMTAYERSKIILRF 136
           SG+      P     I  V     E+V R +      F  G W    M   ER  ++ + 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH 196
           AD++ER+ D  A +   + GKP + +A  EV       R       KI G   P D  Y 
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKP-KSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 197 VQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251
                     EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A    K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 311
            L +AG PP  + +++  G  A   +A    V  ++FTGST  G+ V+++     +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADD-RVAAVSFTGSTEVGERVVKV---GGVKQYV 261
Query: 312 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
           +ELGG  P IV EDAD+D AA+     ++   GQ C A         VY + VE+     
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 372 MKRVVGDPFKGGIQQGPQVN 391
               VGDP    +  GP ++
Sbjct: 322 SSLRVGDPRDPTVDVGPLIS 341

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 130/305 (42%), Gaps = 23/305 (7%)
Query: 85  TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
           +++P TG  +       A+++  A+S A   F +  W   +  +R++ +      L  H 
Sbjct: 11  SVNPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHA 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL---- 200
           +E A   T + GKP +Q A+ EV  +  L  +YA       G       P  V+      
Sbjct: 69  EEXAQCITREXGKPIKQ-ARAEVTKSAALCDWYAE-----HGPAXLNPEPTLVENQQAVI 122
Query: 201 -HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
            + P+GV   I PWNFPL        P L  GN+ +LK A      A  ++++L EAG P
Sbjct: 123 EYRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTP 182
Query: 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI----VLQLAAKSNLKPVTLELG 315
            GV      YG            ++       T TG +     +   A + LK   LELG
Sbjct: 183 AGV------YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
           G  PFIV  DAD++ A + A    + N GQ C A  R  V E +   F ++  A A    
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALK 296
Query: 376 VGDPF 380
            GDP 
Sbjct: 297 XGDPL 301

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
            I+G+ V   SG+     +P TG+V   VA     D+  AV +A+ A  +  W       
Sbjct: 30  FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAA--QPKWAATNPQR 87
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R+++  +F  LL  + +E+A   + ++GK  +  A+ ++     +  +  G     +   
Sbjct: 88  RARVFXKFVQLLNDNXNELAEXLSREHGKTIDD-AKGDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 189 APADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
               GP     ++ +P+G+   I P+NFP  +  W   PA+ACGN  +LK +E+ P   +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
            +++L  EAGLP G+LN+V+G    A  A+ +H ++  ++F GST   + V   AA  N 
Sbjct: 207 RLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-XNG 264
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF-VHESVYDQFVEK 366
           K      G K+  I+  DAD+D+AA     A + + G+ C A S    V E   ++ ++K
Sbjct: 265 KRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDK 324

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
Query: 193 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252
            P     + EP GV   I P+N+P+ +    +  A+  GNT ++K +E TP ++  + K+
Sbjct: 120 APSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKI 179
Query: 253 LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 312
           + EA   P  + ++ G G    + L S +  D + FTGS   GK+V+Q AAK +L PV L
Sbjct: 180 IAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVL 235
Query: 313 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           ELGGK P IV  DAD+D+      +  F N GQ C A    +VH SV D  +E+
Sbjct: 236 ELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLER 289

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 4/173 (2%)
Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
           P     + EP GV   I P+N+P+ +    +  A+  GNT ++K +E TP ++  + K++
Sbjct: 121 PSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKII 180
Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
            EA   P  + ++ G G    + L S +  D + FTGS   GK+V+Q AAK +L PV LE
Sbjct: 181 AEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLE 236
Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           LGGK P IV  DAD+D+      +  F N GQ   A    +VH SV D  +E+
Sbjct: 237 LGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLER 289

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
           EP+GV   I  WN+P  +    +  A+A GN ++LK +E +   A  ++ L+ +  +   
Sbjct: 102 EPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQN 160
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           +  +V G  P     L      D + +TGST  GKIV+  AAK +L PVTLELGGKSP  
Sbjct: 161 LYLVVKGGVPETTELLKERF--DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCY 217
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V +D D+D A     +  F N GQ C A        S+ +Q VEK    ++K   G+  K
Sbjct: 218 VDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKK-SLKDFYGEDAK 276
Query: 382 GGIQQGPQVN 391
                G  +N
Sbjct: 277 QSRDYGRIIN 286

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
           +NRA+ AA  A  E  W      +R+++ L+ AD+L      E+ A      GK   Q+ 
Sbjct: 102 LNRAIDAALAARKE--WDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAE 159
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
                     FR+ A +A +++G    +  P    T++  + G    I P+NF  +    
Sbjct: 160 IDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
              PAL  GN ++ K ++   L++  V ++L EAGLPP ++  V   GPT G  + S   
Sbjct: 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEH 278
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
           +  + FTGS  T K + +  A++  +  T      E GGK+   V   ADVD        
Sbjct: 279 LCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLR 338
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
           + F   GQ C A SR +V +S++ Q   +      +  VGDP
Sbjct: 339 SAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
           EP+GV   I  WN+P  +    +  A+A GN +VLK +E +   A  ++ ++ +  L   
Sbjct: 119 EPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKD 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
           +  +++G  P     L      D + +TGST  GKI++  AAK +L PVTLELGGKSP  
Sbjct: 178 LYPVINGGVPETTELLKERF--DHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCY 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V ++ D+D A     +  F N GQ C A        S+ +Q VEK    ++K   G+  K
Sbjct: 235 VDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKK-SLKEFYGEDAK 293

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP-- 260
           P  + G I PWNFPL +      PAL  G  +V+K +E  P    +V+ LL      P  
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPR---FVAPLLXALNTVPEL 182
Query: 261 -GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319
             VL  V G G T GA L ++  VD + FTGS  TG+ V + AA+  + P  LELGGK P
Sbjct: 183 RDVLIFVEGGGET-GANLINY--VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDP 238
Query: 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
            IV E A+++ A     +    N GQ C +  R +V ES +++F  +  A A +  +  P
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 380 F 380
Sbjct: 299 L 299

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
           +N+A+ AA  A  E  W      +R++I L+ AD+L      EI A      GK   Q+ 
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
                     FR+ A +A +++G    +  P    T++  + G    I P+NF  +    
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
              PAL  GN ++ K ++   L++  V ++L EAGLPP ++  V   GP  G  + S   
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
           +  + FTGS  T K + +  A++  +  T      E GGK+   V   ADV+        
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
           + F   GQ C A SR +V  S++ Q   +      +  VGDP
Sbjct: 342 SAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
           +N+A+ AA  A  E  W      +R++I L+ AD+L      EI A      GK   Q+ 
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
                     FR+ A +A +++G    +  P    T++  + G    I P+NF  +    
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
              PAL  GN ++ K ++   L++  V ++L EAGLPP ++  V   GP  G  + S   
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
           +  + FTGS  T K + +  A++  +  T      E GGK+   V   ADV+        
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
           + F   GQ C A +R +V  S++ Q   +      +  VGDP
Sbjct: 342 SAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSA 163
           +N+A+ AA  A  E  W      +R++I L+ AD+L      EI A      GK   Q+ 
Sbjct: 105 LNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAE 162
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAW 222
                     FR+ A +A +++G    +  P    T++  + G    I P+NF  +    
Sbjct: 163 IDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNL 222
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
              PAL  GN ++ K ++   L++  V ++L EAGLPP ++  V   GP  G  + S   
Sbjct: 223 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEH 281
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-----ELGGKSPFIVCEDADVDKAAELAHY 337
           +  + FTGS  T K + +  A++  +  T      E GGK+   V   ADV+        
Sbjct: 282 LCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLR 341
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
           + F   GQ C A  R +V  S++ Q   +      +  VGDP
Sbjct: 342 SAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66  TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           T+LL N   GQ++ + +G      DP TG  +  V+  E  D+ RA S AR+  D G   
Sbjct: 5   TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           R   Y +R+  +     LL+    +  A+ T ++G     SA  ++        YYA   
Sbjct: 61  RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
             +  + A  DG          +  Q +  P  GVA  I  +NFP      K  PAL  G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
             +++K A  T  L+   V+ ++    LPPG L+I+ G   ++   L      D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
           S  T   +      +Q  A+ N++  +L     +  I+C DA  D  A    + LF  + 
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                   GQ C A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344

>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66  TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           T+LL N   GQ++ + +G      DP TG  +  V+  E  D+ RA S AR+  D G   
Sbjct: 5   TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           R   Y +R+  +     LL+    +  A+ T ++G     SA  ++        YYA   
Sbjct: 61  RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
             +  + A  DG          +  Q +  P  GVA  I  +NFP      K  PAL  G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
             +++K A  T  L+   V+ ++    LPPG L+I+ G   ++   L      D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
           S  T   +      +Q  A+ N++  +L     +  I+C DA  D  A    + LF  + 
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVQADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                   GQ C A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344

>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66  TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           T+LL N   GQ++ + +G      DP TG  +  V+  E  D+ RA S AR+  D G   
Sbjct: 5   TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           R   Y +R+  +     LL+    +  A+ T ++G     SA  ++        YYA   
Sbjct: 61  RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
             +  + A  DG          +  Q +  P  GVA  I  +NFP      K  PAL  G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
             +++K A  T  L+   V+ ++    LPPG L+I+ G   ++   L      D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
           S  T   +      +Q  A+ N++  +L     +  I+C DA  D  A    + LF  + 
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                   GQ C A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 288 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344

>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 47/357 (13%)
Query: 66  TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           T+LL N   GQ++ + +G      DP TG  +  V+  E  D+ RA S AR+  D G   
Sbjct: 3   TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 58
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           R   Y +R+  +     LL+    +  A+ T ++G     SA  ++        YYA   
Sbjct: 59  RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 117
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
             +  + A  DG          +  Q +  P  GVA  I  +NFP      K  PAL  G
Sbjct: 118 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 177
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
             +++K A  T  L+   V+ ++    LPPG L+I+ G   ++   L      D ++FTG
Sbjct: 178 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 234
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
           S  T   +      +Q  A+ N++  +L     +  I+C DA  D  A    + LF  + 
Sbjct: 235 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 285
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                   GQ C A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 286 VREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 342

>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 152/357 (42%), Gaps = 47/357 (13%)
Query: 66  TQLLIN---GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           T+LL N   GQ++ + +G      DP TG  +  V+  E  D+ RA S AR+  D G   
Sbjct: 5   TELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAAL 60
Query: 123 RMTAY-ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
           R   Y +R+  +     LL+    +  A+ T ++G     SA  ++        YYA   
Sbjct: 61  RALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLG 119
Query: 182 DKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACG 231
             +  + A  DG          +  Q +  P  GVA  I  +NFP      K  PAL  G
Sbjct: 120 ASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179
Query: 232 NTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
             +++K A  T  L+   V+ ++    LPPG L+I+ G   ++   L      D ++FTG
Sbjct: 180 VPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTG 236
Query: 291 STTTGKIV------LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ- 343
           S  T   +      +Q  A+ N++  +L     +  I+C DA  D  A    + LF  + 
Sbjct: 237 SADTAATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEV 287
Query: 344 --------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                   GQ   A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 288 VREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344

>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 120/298 (40%), Gaps = 26/298 (8%)
Query: 69  LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
           L+ G+++D A   TF +  P  G      A G  E VNRA  AA +AF    +   +  E
Sbjct: 33  LVAGEWLDGAG--TFASA-PAHGPA-HDFAVGTVELVNRACEAAEEAF--WTYGYSSRKE 86
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
           R+  +   AD +E   + I  + + + G P E     E   TT   R +A   +K   L 
Sbjct: 87  RAAFLRAIADEIEARAEAITEIGSQETGLP-EARLNGERGRTTGQLRLFADHIEKGDYLD 145
Query: 189 APADGPY---------HVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLK 237
              D             ++ +  P+G        NFPL           ALA G  +V+K
Sbjct: 146 RRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVK 205
Query: 238 TAEQTP----LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
                P    + A  V   + + G+ PGV +++ G     G AL  H  +  + FTGS  
Sbjct: 206 GHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLA 265
Query: 294 TGKIVLQL-AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQGQCC 347
            G+ +  L AA+    P   ELG  +P  +  +A   +A  L      +L    GQ C
Sbjct: 266 GGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFC 323

>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 113/289 (39%), Gaps = 26/289 (8%)
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTT---RLF----- 174
           R+   +R+ ++   A  LE  +D+I A    +   P E     E+  T    RLF     
Sbjct: 48  RLNNSKRASLLRTIASELEARSDDIIARAHLETALP-EVRLTGEIARTANQLRLFADVVN 106
Query: 175 --RYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPAL 228
              Y+    D      AP   P     Q    P+ V G     NFPL   A       AL
Sbjct: 107 SGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA---SNFPLAFSAAGGDTASAL 163
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVD 284
           A G  +++K     P ++  V++ + +A     LP  +  ++ G     G AL SH E+ 
Sbjct: 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIK 223
Query: 285 KLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFF 341
            + FTGS   G+ +  LA  +    P   ELG  +P  +   A   KA  A+    ++  
Sbjct: 224 AVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTM 283
Query: 342 NQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQ 389
             GQ C      F   +   Q F+E A +L  ++        GI+   Q
Sbjct: 284 GCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQ 332

>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-- 256
           T+ EP+G+   I+P   P     +K   +L   N I+     +   S    +KL+ +A  
Sbjct: 99  TIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAV 158
Query: 257 --GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
             G P  ++  +         AL  H ++  +  TG     K     AA S+ KP     
Sbjct: 159 AAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSGKPAIGVG 213
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
            G  P ++ E AD+ +A      +  F+ G  C +     V + VYD+  E+
Sbjct: 214 AGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	392
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	0.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	0.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	0.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	0.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	0.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	0.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	0.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	0.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	0.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	0.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	0.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	0.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	0.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	0.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	0.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-179
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-173
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-165
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	1e-150
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	1e-149
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-149
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-146
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-144
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-132
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-127
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-124
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-118
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	1e-118
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-117
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-114
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-114
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-114
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-113
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	1e-111
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-109
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	5e-97
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-96
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-95
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	6e-93
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	1e-82
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-73
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-73
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	6e-72
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	1e-66
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	6e-51
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	2e-48

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  628 bits (1621), Expect = 0.0
 Identities = 205/347 (59%), Positives = 254/347 (73%), Gaps = 4/347 (1%)

Query: 50  AAAAEDPITPPVK---VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
           +AAA   +  P +   V   Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV+
Sbjct: 1   SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60

Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
           +AV AAR AF  G PW RM A  R +++ R ADL+ER    +AALET DNGKP+  S   
Sbjct: 61  KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
           ++ M  +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+G
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180

Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
           PALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240

Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
           +AFTGST  G+++   A  SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300

Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           C CAGSRTFV E +YD+FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 347

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  627 bits (1619), Expect = 0.0
 Identities = 184/347 (53%), Positives = 243/347 (70%), Gaps = 1/347 (0%)

Query: 47  SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
           SS+A          ++  YT++ IN ++  S SGK FP  +P T + +  V EG+ EDV+
Sbjct: 2   SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61

Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
           +AV AAR+AF  G PW  M A ER +++ + ADL+ER    +A +E  + GK F  +   
Sbjct: 62  KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
           ++    +  RY AGWADKIQG T P DG +   T  EP+GV GQIIPWNFPLLMF WK+G
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181

Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
           PAL+CGNT+V+K AEQTPL+AL++  L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241

Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
           +AFTGST  GK++ + A KSNLK V+LELGGKSP IV  DAD+D A E AH  +F++QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301

Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           CC A SR FV ES+YD+FV ++   A K V+G+P   G+ QGPQ+++
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 348

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  619 bits (1600), Expect = 0.0
 Identities = 143/356 (40%), Positives = 218/356 (61%), Gaps = 7/356 (1%)

Query: 44  STASSAAAAAEDPITPPVKVDY---TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
                +            K+      QL I G+FVD+   KT+ T++P  G VI  V+  
Sbjct: 12  GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLA 71

Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
           +  DV++AV+AA++AF+ G W ++ A +R +++ R AD++E+H +E+A +E  D G  + 
Sbjct: 72  QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131

Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFP 216
            + +T V M+ + FRY+AGW DKIQG T P +          T  EP+GV G +IPWN+P
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191

Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
           L+M +WK    LA GNT+V+K A+ TPL+AL  ++L  +AG+P GV+NI+ G G   G  
Sbjct: 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251

Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
           L+ H +V K+ FTGST  GK +++  A SN+K V+LELGGKSP I+  D D++KA ++  
Sbjct: 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGM 311

Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            ++FFN+G+ C A  R FV ES+++QFV+K      K  +G+P +     GPQ ++
Sbjct: 312 SSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHE 367

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  607 bits (1567), Expect = 0.0
 Identities = 126/349 (36%), Positives = 197/349 (56%), Gaps = 3/349 (0%)

Query: 45  TASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAED 104
              +     +      +K    +  I+G++V+SA+  T   ++P   +VI  V+EG  ED
Sbjct: 12  DLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKED 71

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
             RA+ AAR+AF+ G W + TA  R K +   AD ++ H + +A LET D GK  E+ + 
Sbjct: 72  AERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SY 130

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
            ++     +F Y+AG ADK  G    +  P    + + EP+GV  QI PWN+PLL  +WK
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190

Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
           + PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G   G  ++ H EV
Sbjct: 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250

Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
           D ++FTG   TGK +++ AA +N+  + LELGGK+P I+ +DAD + A + A    +F+ 
Sbjct: 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHA 309

Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           GQ C AGSR  V  S+ D+F +       K  +G+ F    + GP ++ 
Sbjct: 310 GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVIST 358

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  600 bits (1550), Expect = 0.0
 Identities = 139/350 (39%), Positives = 207/350 (59%), Gaps = 5/350 (1%)

Query: 46  ASSAAAAAEDPITPPVKVD-YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAE 103
              +   A D   P +++    Q+L++G+ VD+ASG T   + P   G+V+    E  A+
Sbjct: 2   VMLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASAD 61

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
           DV +AV+AARKAFD GPWPRM+  ERS+++ + ADL+    +E+A +E+ + GKP  Q A
Sbjct: 62  DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-A 120

Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
           + E+     L+ Y AG A  ++G T    G       L EP+GV G I PWNFP ++ + 
Sbjct: 121 RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180

Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
           +V  A+  G T+VLK +E T  +++ +++L  EAG+P GV N+V+GYG  AG  LA    
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240

Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
           VD +AFTGS   G  + ++AA+  +K V LELGGK P IV  DAD+D AA+   Y ++ N
Sbjct: 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299

Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            GQCC +GSR  V E + D  +E+   ++ K   GDP     + G  +++
Sbjct: 300 AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISE 349

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  598 bits (1545), Expect = 0.0
 Identities = 136/350 (38%), Positives = 199/350 (56%), Gaps = 5/350 (1%)

Query: 44  STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
              +  +    + +   +K       I G+FV S SG+TFP+LDP T +V+   A G   
Sbjct: 5   DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGER 64

Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
           +V+RA  AA +AF    W R  A ER + +LR A+L+E+H DE+A +E  D G+      
Sbjct: 65  EVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-V 121

Query: 164 QTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
           + +V      F +YA +A+  ++  T P D  +   T+  P G  G I PWN PL++  W
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181

Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
           ++ PALA GNT+VLK AE +P +A  ++++L EA LPPGV N+V G+G  AGAAL +H  
Sbjct: 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241

Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
           V  L  TG T TGKIV++ AA  +LK ++ ELGGKSP +V  DAD+++A +   + +F  
Sbjct: 242 VPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300

Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            G+ C A SR  V E +++ FV K    A    VG P     + GP ++ 
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHP 350

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  596 bits (1540), Expect = 0.0
 Identities = 132/339 (38%), Positives = 190/339 (56%), Gaps = 9/339 (2%)

Query: 61  VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE-- 118
           + +   QL ING +      K  P ++P T ++I  +     EDV+ AV+AA+ A     
Sbjct: 3   IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62

Query: 119 -GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
              W   +   R++ +   A  +     E+A LE+ D GKP ++ A  ++      F YY
Sbjct: 63  GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYY 121

Query: 178 AGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
           A  A+K+              +    L EPIGV G I PWN+P+LM  WKV PALA G  
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181

Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
            +LK +E   L+ L + ++  E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+ 
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241

Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
           TG  ++  AA+  +KPV+LELGGKSP +V ED D+DKAAE A +  F+  GQ C A SR 
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300

Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            +HES+  +F+ +         + DP + G + GP V++
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSE 339

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  587 bits (1517), Expect = 0.0
 Identities = 123/347 (35%), Positives = 188/347 (54%), Gaps = 6/347 (1%)

Query: 47  SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDV 105
           +    +     T  V V        G+ + S  G T  P  +P TG V+  +    AE+V
Sbjct: 1   AQLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEV 60

Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
           ++AV +A+ A+    W +M   ERS+++L  A ++    D IA LE  +NGK     A+ 
Sbjct: 61  DQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEY 117

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
           ++    +   YYAG A  + G      G     T  EP+GV   I+ WN+P ++ AWK  
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177

Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
           PALACGN +V K +  TP++ + ++++ HEAG+P G++N+V G G   G+ L  H  V K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236

Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
           ++FTGS  TGK V++++AK  +K VTLELGGKSP ++ +D +++ A   A  A F  QGQ
Sbjct: 237 VSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295

Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            C  G+R FV   +  QF+E+        VVGDP     + G  +++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISK 342

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  583 bits (1506), Expect = 0.0
 Identities = 118/336 (35%), Positives = 178/336 (52%), Gaps = 6/336 (1%)

Query: 58  TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
           TP          I+G +V+  +G  F ++ P TG++I  +       V RA+++A++A  
Sbjct: 7   TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65

Query: 118 EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
              W  M+   R +I+ R AD++   ND ++ LET D GKP +++   +       F ++
Sbjct: 66  -KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFF 124

Query: 178 AGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
            G A   + G   P  G     T   P+GV   I  WN+P  +  WK  PAL  GN +V 
Sbjct: 125 GGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVF 183

Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
           K +E TPL AL ++++L EAGLP G+ N++ G   T G  L +H +V K++ TGS  TG+
Sbjct: 184 KPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGR 242

Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
            V   AA  +LK VT+ELGGKSP IV +DAD++ A   A    F++ GQ C  G+R FV 
Sbjct: 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQ 301

Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +    +F+E         ++GDP       GP V++
Sbjct: 302 KKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSK 337

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  576 bits (1488), Expect = 0.0
 Identities = 124/348 (35%), Positives = 184/348 (52%), Gaps = 6/348 (1%)

Query: 46  ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
                      +     +   +LLING+ V    G+  P  +P TGDV+  +AE  AE V
Sbjct: 4   HHHHHHLESTSLYKKAGLMQHKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQV 62

Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
           + AV AA  AF    W + T   R++ +L+ AD++E +    A LE+ + GKP   +   
Sbjct: 63  DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120

Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
           E+P    +FR++AG A  + GL A      +      +P+GV   I PWN+PL+M AWK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180

Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
            PALA GN +VLK +E TPL+AL +++L  +   P GV+NI+ G G T G  L  H +V 
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239

Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
            ++ TGS  TG+ ++   A S++K   +ELGGK+P IV +DAD++   E      ++N G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298

Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           Q C A  R +  + +YD  VEK  A       G P     + GP  + 
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSL 346

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  573 bits (1479), Expect = 0.0
 Identities = 121/346 (34%), Positives = 179/346 (51%), Gaps = 6/346 (1%)

Query: 48  SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
           S+             +  TQLLI  +F    +      L+PRTG  I  +AE     ++ 
Sbjct: 8   SSGVDLGTENLYFQSMMDTQLLIGSRFEA-GTEAEEHILNPRTGAGIIDLAEASHAQIDA 66

Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
           AV AA +AF    W + T  ERS  +L+ AD +E+  DE AALE  + GKP       E+
Sbjct: 67  AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124

Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
           P     +R++AG    +    A    P +      +PIG+ G I PWN+PL+M AWK+ P
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184

Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
           A+  GNT+V K +EQTPL+AL +++L+ +  LP GV+N+++G G T G AL +H +V  +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243

Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
           + TG   TGK VL  AAK  +K   LELGGK+P IV  DAD++          ++N GQ 
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302

Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           C A  R +    +Y++ V    +               + GP +++
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISR 348

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  530 bits (1367), Expect = 0.0
 Identities = 116/330 (35%), Positives = 164/330 (49%), Gaps = 2/330 (0%)

Query: 63  VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
            +Y +L I G++   ++        P TG+ +  V    A DV+ AV+AAR AFD GPWP
Sbjct: 6   TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65

Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
               +ER+ +I     +L    D    L   + G+P           +     Y+AG AD
Sbjct: 66  STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125

Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
           K+                 EP+GV G I+ WN PL +   K+ PAL  G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185

Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
           PL+A  ++++  E GLP GVL++V G G   G AL S+ ++D   FTGS+  G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244

Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
           A+  LKP TLELGGKS  I+ ED D+  A  +  ++   N GQ C   +R     S YD+
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303

Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            V           VG P     Q GP +++
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISE 333

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  513 bits (1324), Expect = 0.0
 Identities = 109/351 (31%), Positives = 172/351 (49%), Gaps = 13/351 (3%)

Query: 49  AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNR 107
           A   A   +   +  +Y  L+ING+ V +       + +P R   ++  V++   +   +
Sbjct: 22  AFEEALGLVEKELGKEY-PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEK 78

Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
           A+ +A +AF    W  +   ER+ I+++ A ++ R   E +A    + GKP+++ A  + 
Sbjct: 79  AIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADT 135

Query: 168 PMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
                   YYA    ++ +G    +      +  + P+GV   I PWNF L +       
Sbjct: 136 AEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVA 195

Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
            +  GNT+VLK A  TP+ A    ++L +AGLP GV+N V G G   G  L  H +   +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255

Query: 287 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
            FTGS   G  + + AA      ++LK V +E+GGK   +V  DAD+D AAE    + F 
Sbjct: 256 TFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG 315

Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             GQ C AGSR  +H+ VYD+ +EK  ALA    VGDP       GP +++
Sbjct: 316 FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDE 366

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  512 bits (1320), Expect = 0.0
 Identities = 105/346 (30%), Positives = 178/346 (51%), Gaps = 4/346 (1%)

Query: 47  SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
                       P   ++  +  ING + D ++      +DP T +    ++ G   D +
Sbjct: 7   HHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDAD 66

Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
           +A++AA+KAF    W   + +ER   + +  ++ E+ + ++A   + + G P + +   +
Sbjct: 67  KAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQ 124

Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
               +   R +     +     A  +G       ++ IGV G I PWN+P+     KV P
Sbjct: 125 TATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP 184

Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
           AL  G T+VLK +E  PLSA+  +++L EA LP GV N+++G G   G+ L++H +++ +
Sbjct: 185 ALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244

Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
           +FTGST  GK + + A+   LK V LELGGK   I+  DAD+D A +      F+N GQ 
Sbjct: 245 SFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQS 302

Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           C A +R  V +++YD+ ++ A  +A K  VG   + G   GP V++
Sbjct: 303 CNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSK 348

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  505 bits (1304), Expect = e-179
 Identities = 113/329 (34%), Positives = 177/329 (53%), Gaps = 7/329 (2%)

Query: 64  DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
           DYT+  ING++V+S S +T   ++P T +VI  VA+G   DV++AV AA   + E  +  
Sbjct: 6   DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63

Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
            +  ER  ++ +     E   D+I    T + G P   S +    M    F       D 
Sbjct: 64  TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123

Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
            +      D       + E IGV+G I PWNFP    + K+  A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179

Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            +A+ ++++  + G+P GV N+V+G G   G  L+ H +V  ++FTGS  TG  +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
           K + K V+LELGGKSP+IV +D D+ +AA+     +  N GQ C AG+R  V   + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298

Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + +      +  VG+P + G Q GP +++
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISK 327

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  492 bits (1270), Expect = e-173
 Identities = 100/336 (29%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 65  YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
           +  L I G++VD+   +   +L+P    +V+   A+    +   A+ AA KAF    W  
Sbjct: 37  HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92

Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
               +RS+++L+ A L+ R   E+ A   ++ GK + + A  +V        YYA  A +
Sbjct: 93  WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151

Query: 184 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
            +              ++ + P+G    I PWNFP+ +F   +   +A GNT++ K AE 
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
             +    V ++ HEAG PPGV+N + G G   GA L  H  +  + FTGS   G  + + 
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271

Query: 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
           A +     +  K   +E GGK+  IV E AD D AAE    + +  QGQ C A SR  + 
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331

Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +  Y+  +E+    A +  VG P +     GP V+ 
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSA 366

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  472 bits (1217), Expect = e-165
 Identities = 118/333 (35%), Positives = 174/333 (52%), Gaps = 6/333 (1%)

Query: 63  VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
           +D T+ LI GQ+V+  S +    ++P    VI    +    DV+ A  AA+KA     W 
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67

Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
              A ERS II R A+LLE H +EI      ++G    + A  E+ +   + +  A +  
Sbjct: 68  ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPG 126

Query: 183 KIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           ++ G  +P++ P    +      GV G I PWNFPL +    V PALA GN +V+K A  
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186

Query: 242 TPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           TP++   +  ++  EAG+P GV++ V+G G   G    +H     ++FTGST  G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246

Query: 301 LAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           LA     +K V LELGG +PF+V  DAD+D AA+ A    F +QGQ C + +R  V  +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +D+F+EK          GDP   G   GP +N 
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIND 339

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  432 bits (1113), Expect = e-150
 Identities = 95/344 (27%), Positives = 139/344 (40%), Gaps = 13/344 (3%)

Query: 54  EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
           E  I     V      + G++  S  G+      P     I  V     E+V R +    
Sbjct: 7   EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 64

Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
           K         M   ER  ++ + AD++ER+ D  A +   + GKP    A  EV      
Sbjct: 65  KRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDR 122

Query: 174 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
            R       KI G   P D  Y           EP+GV   I P+N+PL     K+  + 
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182

Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
             GN +V+K +   PL A    K L +AG PP  + +++  G      + +   V  ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241

Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
           TGST  G+    +     +K   +ELGG  P IV EDAD+D AA+     ++   GQ C 
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298

Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           A         VY + VE+         VGDP    +  GP ++ 
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISP 342

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  431 bits (1112), Expect = e-149
 Identities = 111/333 (33%), Positives = 163/333 (48%), Gaps = 13/333 (3%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
             +L NG++V+S +G+      P +G  +  +     E+VN A+  A+ A     W    
Sbjct: 12  ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
            +ER  ++  +ADLLE   + I  L   +  KP +  A  EV  T  + R+ A  A ++ 
Sbjct: 70  IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALRLN 128

Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           G T   D               EP+GV   I P+N+P+ + A K+ PAL  GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
            Q  LS + + + L +AG P G++ +V+G G   G  L  H  +D + FTG TTTG+   
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
            ++ K+ + PV LELGGK P IV +DAD+   A       F   GQ C A  R FV +SV
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            DQ V     L  +  VG P        P +++
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDE 337

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  430 bits (1108), Expect = e-149
 Identities = 94/329 (28%), Positives = 167/329 (50%), Gaps = 14/329 (4%)

Query: 68  LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
           + I+G++++    +    ++P + +VI  +     E+   A+  A K  +      +   
Sbjct: 2   MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPIT 56

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
           +R  I++  A  ++   +E+A +   D GKP +Q A+ EV  +   F+  A +  + +  
Sbjct: 57  KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115

Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
             P+D    + T  EP+G+ G I P+NFPL + A K+ PA+A GN IV   + + PL  +
Sbjct: 116 VIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174

Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
            ++K++  A     +P GV N+++G G   G  +  + +V+ ++FTGS+  G+++ + A 
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234

Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
               K + LELGG +P IV +DAD++KA        F   GQ C +     V ES+ D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291

Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +E     A    VG+P       GP ++ 
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISV 320

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  423 bits (1091), Expect = e-146
 Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 7/329 (2%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           +   I GQ++    G+T  +LDP    V+      +A  V+ AV AAR+AF    W R  
Sbjct: 6   STHYIAGQWLA-GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             +R +++ RFA  L+   DE+A +   + GKP  + + TEV               +  
Sbjct: 63  LEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRERT 121

Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
           G  +           H+P GV     P+NFP  +    + PAL  GN +V K +E TP  
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181

Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
           A    K   +AGLP GVLN+V G G   G ALA+H  +D L FTGS+ TG ++       
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240

Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFV 364
             K + LE+GG +P +V E AD+D A      + F + GQ C    R  V +  + D  +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300

Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQVNQ 392
            +  A++    VG    +     G  ++ 
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISL 329

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  420 bits (1082), Expect = e-144
 Identities = 78/346 (22%), Positives = 129/346 (37%), Gaps = 24/346 (6%)

Query: 64  DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
           +  +  + GQ++   +G      DP TG  +  V+    +       A            
Sbjct: 6   ELLKNHVAGQWIA-GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRA 62

Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
           +T  +R+  +     LL+    +  A+ T ++G     SA  ++        YYA     
Sbjct: 63  LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121

Query: 184 IQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
           +  + A  DG                L    GVA  I  +NFP      K  PAL  G  
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181

Query: 234 IVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
           +++K A  T      +   + +AG LPPG L+I+ G   ++   L      D ++FTGS 
Sbjct: 182 VIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSA 238

Query: 293 TTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAHYALFFNQGQC 346
            T   +    A       + ++    +  I+C DA       D   +     +    GQ 
Sbjct: 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298

Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           C A  R FV E+  +  +E   A   K  VG+P    ++ G  V++
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  387 bits (997), Expect = e-132
 Identities = 116/329 (35%), Positives = 176/329 (53%), Gaps = 6/329 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
             + I+GQFV          ++P T  VI+ + +G+AED  +A+ AA +A  E  W  + 
Sbjct: 7   HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+  + + +  +     EI+AL   + GK  +  A+ EV  T     Y A WA + +
Sbjct: 65  AIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARRYE 123

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G    +D P  ++      +GV   I+PWNFP  + A K+ PAL  GNTIV+K +E TP 
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +A+  +K++ E GLP GV N+V G G T G  LA + +V  ++ TGS + G+ ++  AA 
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
            N+  V LELGGK+P IV +DAD++ A +    +   N GQ C    R +V + +YDQFV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302

Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQVNQ 392
            +          G+P  +  I  GP +N 
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINA 331

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  374 bits (963), Expect = e-127
 Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 15/333 (4%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +  +NG++  S         +P +G  +  V     E+V+   ++A+KA     W  ++
Sbjct: 5   YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
             ER+  + + AD+L R  ++I A+ + +  K + +SA +EV  T  +  Y A    +++
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRME 119

Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
           G                     EP+G+   I P+N+P+ +   K+ PAL  GN I  K  
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179

Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
            Q  +S L +++   EAGLP GV N ++G G   G  +  H  V+ + FTGST  G+ + 
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239

Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           ++A    ++P+ LELGGK   IV EDAD++  A+      F   GQ C A  R  V ESV
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            D+ VEK     +   +G+P        P ++ 
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITPLIDT 328

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  366 bits (943), Expect = e-124
 Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 7/332 (2%)

Query: 64  DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
              +  ING++    SG+T   L+P    VIT  +    + +  A   A+KA  E  W +
Sbjct: 5   TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62

Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
            T  +R  ++ +    L  + D+I  +   + G    + +  E+  T  +      +  +
Sbjct: 63  STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121

Query: 184 IQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
           + G+   P+D      +    P+GV   I P+NFP+ +    + PA+A GN++V K   Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181

Query: 242 TPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
           T +S    ++K    AGLP GVLN++       G  + ++     ++FTGST  G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           +A     K + LELGG +PF V  DADVD+A + A +  F +QGQ C   +R  VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           D+FVEK  A   +   GD        GP +N+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINE 332

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  365 bits (940), Expect = e-118
 Identities = 102/331 (30%), Positives = 162/331 (48%), Gaps = 12/331 (3%)

Query: 69  LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
            ING+ V +      PT++P +  +V+  + +    +V  A++AA+ AF    W      
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDPR 590

Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
            R++ +L+ A    +   E++A +  + GK ++Q A  +V        YYA    ++   
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQP 649

Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
                 P       +EP GVA  I PWNFPL +       A+  GN +V K +  T +  
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709

Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
            ++ +L  EAGLP GV N   G G   G  L  H ++  +AFTGS  TG  +++ AAK  
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769

Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
              +N+K +  E+GGK+  I+ +DAD+D+A     Y+ F  QGQ C A SR  V ++VYD
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +F+E+  ++A    VG         G   + 
Sbjct: 830 KFIERLVSMAKATKVGPSEDPANYMGAVADD 860

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  350 bits (901), Expect = e-118
 Identities = 122/328 (37%), Positives = 167/328 (50%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
               I GQ+V S    T   L P TG VI  +  G   D   A+  A+ A     W ++T
Sbjct: 13  KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A  R  ++  FA+ +  +   +A +   + GK     A+ EV +T     Y    A  I+
Sbjct: 71  ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALTIE 129

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G   P+D     +     P GV   I  WNFPL +   K+GPAL  GNT+VLK  ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +   + ++  EAGLP GVLN+++G G   G  L        +  TGST  GK + + +A 
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             + PV LELGGK+P +V +DAD+DKAAE A +  F N GQ C    R +VH SVYD+F+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            K   L     VGDP     Q GP+ NQ
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQ 336

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  349 bits (897), Expect = e-117
 Identities = 91/332 (27%), Positives = 148/332 (44%), Gaps = 12/332 (3%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            + + NG +     G+   T  P   + I  V +    D    V  AR+A+    W  + 
Sbjct: 24  NEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A +R +I+ +  D L      + +L + + GK        EV     +  Y  G +  I 
Sbjct: 80  APKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRMIG 138

Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G   P++   H +     P+G+ G I  +NFP+ ++ W    A+ CGN  + K A  T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198

Query: 245 SALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
            ++ V+K++ +      LP  + ++  G G   G A+A    V+ L+FTGST  GK V  
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257

Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
           +  +       LELGG +  I  EDAD+      A +A     GQ C    R F+HES++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316

Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           D+ V +      +  VG+P+   +  GP   +
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTK 348

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  341 bits (877), Expect = e-114
 Identities = 127/328 (38%), Positives = 187/328 (57%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            Q LING+++D+ +G+     +P  GD +  V +  A++   A+ AA +A     W  +T
Sbjct: 10  QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+  + +L+  H D++A L T + GKP  + A+ E+        ++A    +I 
Sbjct: 68  AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIY 126

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G T P       +  + +PIGV   I PWNFP  M   K GPALA G T+VLK A QTP 
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           SAL +++L   AG+P GV N+V+G     G  L S+  V KL+FTGST  G+ +++  A 
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
            ++K V+LELGG +PFIV +DAD+DKA E A  + F N GQ C   +R +V + VYD+F 
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           EK      K  +GD    G+  GP +++
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDE 333

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  341 bits (877), Expect = e-114
 Identities = 130/328 (39%), Positives = 185/328 (56%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            Q  I G++  + S  TF   DP TG+ +  V +  A +  RA+ AA+ A+    W   T
Sbjct: 13  HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+ R+ DL+  ++D++A + T + GKP  + A+ E+        ++A    ++ 
Sbjct: 71  AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G T P       +  + EPIGV   I PWNFP  M A KVGPALA G  IV+K AE TP 
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           SAL ++ L   AG+P GVL++V G     G  + S+  V KL+FTGST  G++++  +A 
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             +K +TLELGG +PFIV +DAD+D A E A  + + N GQ C   +R FVHE VYD F 
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +K  A   K  VG   + G   GP +N+
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINE 336

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  341 bits (878), Expect = e-114
 Identities = 117/328 (35%), Positives = 163/328 (49%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
               I G++ DSA G TF   +P TG VI  V     EDV  AV A + A          
Sbjct: 12  LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
              R K +    D L+ + +EI  +   ++GKP+++ AQ EV      F Y A     + 
Sbjct: 70  IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISALD 128

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
             T P           + P+GV G I+PWNFP+ M A K+  ALA G   V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           + +    ++ +  LP G++N+V G     G  L  H +V  L+FTGST  G+ ++   A 
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             +K + LELGG +PFIV +DAD++ AA+      F   GQ C   +R FVHE V D F 
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           +K      K  VGD    GI  GP +N+
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINK 335

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  340 bits (874), Expect = e-113
 Identities = 122/328 (37%), Positives = 185/328 (56%), Gaps = 5/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           +Q L+NG+++D+A G T    +P  G VI  V       +  A+ A+ KA     W   T
Sbjct: 33  SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ER+ I+ ++ DL+  + D+IA + T + GKP  + A+ EV        ++A  A ++ 
Sbjct: 91  AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G T PA      +  + +P+GV   I PWNFP  M   K  PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +AL +  L  +AG+P GVL IV+G     GA L S+  V KL+FTGST  G++++   A 
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
             +K ++LELGG +PFIV +DAD+D A + A  + + N GQ C   +R +V   VYD+F 
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           EK  A   +  VG+  + G+  GP + +
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEE 356

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  335 bits (860), Expect = e-111
 Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 29/338 (8%)

Query: 75  VDSASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
           ++  +   F   +  TG+ +          +VN+A +AA K   +  + R+   +R+ ++
Sbjct: 1   MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58

Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
              A  LE  +D+I A    +   P  +    E+  T    R +A   +      A  D 
Sbjct: 59  RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117

Query: 194 P---------YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQT 242
           P           ++     +G        NFPL   A       ALA G  +++K     
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177

Query: 243 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
           P ++  V++ + +A     LP  +  ++ G     G AL SH E+  + FTGS   G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237

Query: 299 LQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTFV 355
             LA +     P   ELG  +P  +   A   KA  A+    ++    GQ C      F 
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297

Query: 356 HES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             +     F+E A +L                 P +  
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGIRD 329

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  327 bits (842), Expect = e-109
 Identities = 120/332 (36%), Positives = 189/332 (56%), Gaps = 11/332 (3%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
           T   + G+++ +    TFP  DP +G  +  VA+    +   AV AA +AF    W  ++
Sbjct: 13  TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
           A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A  E+  +     +++  A ++ 
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127

Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G              L +PIGVA  I PWNFP  M   KVG ALA G T+V+K AE TP 
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187

Query: 245 SALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
           SAL +++L  +AG+P GV N++          G A+ +   V K++FTGSTTTGKI+L  
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           AA +++K V++ELGG +PFIV + A+VD+A   A  + F N GQ C   ++  V   ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306

Query: 362 QFVEK-ANALAMKRVVGDPFKGGIQQGPQVNQ 392
            FV+  A A+     VG+ F+ G  QGP +N+
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINE 338

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  295 bits (759), Expect = 5e-97
 Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 5/314 (1%)

Query: 79  SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138
           +     +++P TG  +  +    A+++  A+S A   F +  W   +  +R++ +     
Sbjct: 5   TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62

Query: 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ 198
            L  H +E+A   T + GKP +Q A+ EV  +  L  +YA     +              
Sbjct: 63  ALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121

Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
             + P+GV   I+PWNFPL        P L  GN+ +LK A      A  ++++L EAG 
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181

Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
           P GV   V+         +     +  +  TGS   G  +   A    LK   LELGG  
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239

Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
           PFIV  DAD++ A + A    + N GQ C A  R  V E +   F ++  A A    +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299

Query: 379 PFKGGIQQGPQVNQ 392
           P       GP    
Sbjct: 300 PLVEENDLGPMARF 313

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  295 bits (757), Expect = 2e-96
 Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 5/311 (1%)

Query: 82  TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141
            + +++P T +         ++ ++ A++ A   + +  W       R++I+   A+ L+
Sbjct: 5   KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62

Query: 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201
            H DE+A + T + GK   + ++ EV +   +  YYA    ++   T       +   L 
Sbjct: 63  EHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121

Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
           +  GV     PWNFPL        P    GN I+LK A   P SA   +K++  AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181

Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
            L  +          +A    +  +A TGS   G  V + A K NLK  T+ELGG   FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239

Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
           V +DAD      + + A  +N GQ C +  R  V +S YD+ + +   +      GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299

Query: 382 GGIQQGPQVNQ 392
                 P  ++
Sbjct: 300 ADTTLPPMNSE 310

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  292 bits (749), Expect = 1e-95
 Identities = 53/300 (17%), Positives = 109/300 (36%), Gaps = 14/300 (4%)

Query: 97  VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156
           +      +++  ++  +KA +E  +   +  +  KI    +    +    +A     ++G
Sbjct: 1   MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58

Query: 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
               +  +         F Y     ++  G+    D      T+ EP+G+   I+P   P
Sbjct: 59  MGIVE-DKVIKNHFASEFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNP 116

Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPT 272
                +K   +L   N I+     +   S    +KL+ +A    G P  ++  +      
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176

Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
              AL  H ++  +  TG     K     AA S+ KP      G  P ++ E AD+ +A 
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231

Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
                +  F+ G  C +     V + VYD+  E+  +     +        +++   ++ 
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDG 290

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  287 bits (737), Expect = 6e-93
 Identities = 85/349 (24%), Positives = 130/349 (37%), Gaps = 31/349 (8%)

Query: 66  TQLLINGQFVDSA-SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM 124
            + L+ G+++D A +  + P   P         A G  E VNRA  AA +AF    +   
Sbjct: 30  GKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWT--YGYS 82

Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--- 181
           +  ER+  +   AD +E   + I  + + + G P  +    E   TT   R +A      
Sbjct: 83  SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141

Query: 182 -------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGN 232
                  D       PA     ++ +  P+G        NFPL           ALA G 
Sbjct: 142 DYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200

Query: 233 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
            +V+K     P +   V++ +  A    G+ PGV +++ G     G AL  H  +  + F
Sbjct: 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260

Query: 289 TGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQG 344
           TGS   G+ +  L A      P   ELG  +P  +  +A   +A  L      +L    G
Sbjct: 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320

Query: 345 QCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           Q C       V E    D+F   A     K         GI +  +  Q
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQ 369

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  271 bits (694), Expect = 1e-82
 Identities = 106/355 (29%), Positives = 154/355 (43%), Gaps = 12/355 (3%)

Query: 45  TASSAAAAAEDPITPPVKVDYTQLLINGQFVD---SASGKTFPTLDPRTGDVITHVAEGE 101
                 AAA   I  P    +     N + V+     +     T        +  +A+  
Sbjct: 490 AIVRPQAAAHPRIPLPCD-LFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADAT 548

Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
            +  + AV+AAR  F    W R  A  R+  + + A LLE  +    AL   + GK  + 
Sbjct: 549 PDQAHAAVAAARAGFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD 606

Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLM 219
            A +E+       RYYA    K+ G      GP            GV   I PWNFPL +
Sbjct: 607 -ALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665

Query: 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 279
           F  +V  AL  GN++V K AEQTP  A     LLHEAG+P   L +V+G G   GAAL +
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTA 724

Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
           H ++  + FTGST   + + +  A  +  + P+  E GG +  I    A  ++ A+    
Sbjct: 725 HPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVT 784

Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + F + GQ C A    FV E V D+ +E     A +  +GDP       GP ++ 
Sbjct: 785 SAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDV 839

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  235 bits (602), Expect = 2e-73
 Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 15/269 (5%)

Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
           ++V   + +A KA  E     M+  +   I+   AD      +++A +   + G    Q 
Sbjct: 12  QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69

Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
              +    ++   +   +   ++ +    +     V  +  P+GV   +IP   P     
Sbjct: 70  KVIKNVFASK---HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126

Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAAL 277
           +K   ++  GN+IV         + L   +++ E    AG P G ++ ++         L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186

Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
             H +   +  TG +   K     AA S+  P      G  P  +   A++ +A +    
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241

Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
           +  F+ G  C +     V     +  + +
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAE 270

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  235 bits (603), Expect = 2e-73
 Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 6/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +  ING++V+S + +    ++P T +V+  V     ED++ A   A +AF    W ++ 
Sbjct: 6   LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
              R++I+  F  LL +H +E+A L T +NGK  ++ A  EV        + AG    + 
Sbjct: 64  VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMM 122

Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           G +  +            PIGV G I P+NFP+++  W    A+A GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
               + +L  +AGLP GV N+V G        +  H E+  ++F GS   G+ V +  ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
            NLK V    G K+  IV  DA+++        A F + G+ C A +   V E + D+F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            K         +G+    G+  GP + +
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIRE 328

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  232 bits (595), Expect = 6e-72
 Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 7/348 (2%)

Query: 47  SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
           SS      + +     +      I+G+ V   SG+     +P TG+V   VA     D+ 
Sbjct: 8   SSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLA 67

Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
            AV +A+ A  +  W       R+++ ++F  LL  + +E+A + + ++GK  +  A+ +
Sbjct: 68  AAVESAKAAQPK--WAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGD 124

Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
           +     +  +  G     +       GP   + ++ +P+G+   I P+NFP ++  W   
Sbjct: 125 IVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184

Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
           PA+ACGN  +LK +E+ P   + +++L+ EAGLP G+LN+V+G    A  A+ +H ++  
Sbjct: 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAA 243

Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
           ++F GST   + V   AA  N K      G K+  I+  DAD+D+AA     A + + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGE 302

Query: 346 CCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            C A S    V E   ++ ++K   +     +G         GP V +
Sbjct: 303 RCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTK 350

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  220 bits (562), Expect = 1e-66
 Identities = 79/320 (24%), Positives = 128/320 (40%), Gaps = 13/320 (4%)

Query: 68  LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
            ++  + V +        L P      +      +   +NRA+ AA  A  E  W     
Sbjct: 66  CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121

Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI- 184
            +R+++ L+ AD+L      E+ A      GK   Q+           FR+ A +A ++ 
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181

Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
                      +        G    I P+NF  +      G     GN ++ K ++   L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGNVVLWKPSDTAML 240

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           ++  V ++L EAGLPP ++  V   GPT G  + S   +  + FTGS  T K + +  A+
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300

Query: 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
           +         +  E GGK+   V   ADVD        + F   GQ C A SR +V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360

Query: 360 YDQFVEKANALAMKRVVGDP 379
           + Q   +      +  VGDP
Sbjct: 361 WPQIKGRLLEEHSRIKVGDP 380

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  176 bits (449), Expect = 6e-51
 Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 19/292 (6%)

Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
             ++ AV  AR AF  G         R + +     L++    E+  AL   D  K    
Sbjct: 18  SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEWN 74

Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
           +   EV        Y       WA        P      +    EP+GV   I  WN+P 
Sbjct: 75  AYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPF 134

Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
            L     VG A+A GN +VLK +E +   A  ++ ++ +  L   +  +++G G      
Sbjct: 135 NLTIQPMVG-AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTE 191

Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
           L      D + +TGST  GKI++  AAK +L PVTLELGGKSP  V ++ D+D A     
Sbjct: 192 LLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249

Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
           +  F N GQ C A        S+ +Q VE      +K+ + + +    ++  
Sbjct: 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSR 296

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  169 bits (430), Expect = 2e-48
 Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 14/299 (4%)

Query: 92  DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AAL 150
           D   H+       ++   SA +  F            R + + R  + +  + + + +AL
Sbjct: 17  DDDKHMNYLSPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKEALYSAL 74

Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGV 206
              D GKP +     E+        +       W   +   +     P     + EP GV
Sbjct: 75  AE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133

Query: 207 AGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
              I P+N+P+ L     +G A+  GNT ++K +E TP ++  + K++ EA   P  + +
Sbjct: 134 TYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAV 191

Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
           + G G    + L S    D + FTGS   GK+V+Q AAK +L PV LELGGK P IV  D
Sbjct: 192 IQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248

Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
           AD+D+      +  F N GQ   A    +VH SV D  +E+        +      G +
Sbjct: 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKL 307

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	392
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	84.09

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=8.1e-78  Score=610.25  Aligned_cols=327  Identities=41%  Similarity=0.714  Sum_probs=313.9

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+++.+|++++++||.||++|++++.++.+|+++|+++|++||+  .|++++..+|.++|++++++|+++
T Consensus         5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~   82 (490)
T 2wme_A            5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER   82 (490)
T ss_dssp             CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence            345899999999988899999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||+.+++..|+..+++.++||+.+.+++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~  162 (490)
T 2wme_A           83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK  162 (490)
T ss_dssp             HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence            99999999999999999987667999999999999999998887777666778899999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus       163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a  242 (490)
T 2wme_A          163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS  242 (490)
T ss_dssp             HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999988665


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      .+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~  322 (490)
T 2wme_A          243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN  322 (490)
T ss_dssp             HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence            55899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       323 ~~~Gpli~~  331 (490)
T 2wme_A          323 TNFGPLVSF  331 (490)
T ss_dssp             CCBCCCSCH
T ss_pred             CccCCcCCH
Confidence            999999973

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=1.3e-73  Score=581.87  Aligned_cols=325  Identities=36%  Similarity=0.566  Sum_probs=312.4

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      +...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++
T Consensus         9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   86 (506)
T 3rh9_A            9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE   86 (506)
T ss_dssp             GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            4556899999999877889999999999999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEe-cccceEEEEcCCcccHHHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+...+...++.+ +|+|||++|+|||||+...+
T Consensus        87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  165 (506)
T 3rh9_A           87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA  165 (506)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence            999999999999999999987 6999999999999999999877766554566778889 99999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|+.||+||+|+||||+++|+.|++.
T Consensus       166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~  245 (506)
T 3rh9_A          166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD  245 (506)
T ss_dssp             HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240          302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK  381 (392)
Q Consensus       302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~  381 (392)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  324 (506)
T 3rh9_A          246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN  324 (506)
T ss_dssp             TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred             hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCC
Q 016240          382 GGIQQGPQVN  391 (392)
Q Consensus       382 ~~~~~Gpli~  391 (392)
                      +++++||||+
T Consensus       325 ~~~~~Gpli~  334 (506)
T 3rh9_A          325 DGIDIGPLIN  334 (506)
T ss_dssp             TTCSBCCCSC
T ss_pred             cCCcccccCC
Confidence            9999999997

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1.1e-73  Score=580.35  Aligned_cols=324  Identities=40%  Similarity=0.642  Sum_probs=309.9

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      ..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   89 (484)
T 3ifg_A           12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS   89 (484)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            45799999999877889999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus        90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  168 (484)
T 3ifg_A           90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK  168 (484)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence            9999999999999999976 5999999999999999888776655533 4567889999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus       169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa  248 (484)
T 3ifg_A          169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA  248 (484)
T ss_dssp             HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999987889999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  327 (484)
T 3ifg_A          249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG  327 (484)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       328 ~~~Gpli~~  336 (484)
T 3ifg_A          328 ATLGPLINE  336 (484)
T ss_dssp             CCBCCCSSH
T ss_pred             CCCCCCcCH
Confidence            999999973

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.4e-73  Score=583.59  Aligned_cols=324  Identities=38%  Similarity=0.654  Sum_probs=310.5

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~--~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||  +  .|+.++..+|.++|+++++.|+
T Consensus        31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~  108 (520)
T 3ed6_A           31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIK  108 (520)
T ss_dssp             SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHH
T ss_pred             cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence            35579999999987788999999999999999999999999999999999999  7  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      ++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus       109 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  187 (520)
T 3ed6_A          109 EHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQA  187 (520)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHH
Confidence            9999999999999999999987 5999999999999999988777655543 4567889999999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      +++++|||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|++
T Consensus       188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~  267 (520)
T 3ed6_A          188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK  267 (520)
T ss_dssp             HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987889999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      .+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus       268 ~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~  346 (520)
T 3ed6_A          268 NAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGF  346 (520)
T ss_dssp             HHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTT
T ss_pred             Hhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence            9997 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCC
Q 016240          381 KGGIQQGPQVN  391 (392)
Q Consensus       381 ~~~~~~Gpli~  391 (392)
                      |+++++||||+
T Consensus       347 d~~~~~Gpli~  357 (520)
T 3ed6_A          347 DADTEMGPVIS  357 (520)
T ss_dssp             STTCSBCCCSC
T ss_pred             cCCCcccccCC
Confidence            99999999997

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.1e-73  Score=579.72  Aligned_cols=329  Identities=35%  Similarity=0.571  Sum_probs=310.7

Q ss_pred             CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ++.+.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++.++|.++|+++++.|+
T Consensus         5 ~~~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~   84 (495)
T 3b4w_A            5 ATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLA   84 (495)
T ss_dssp             CEECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHH
T ss_pred             cccccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHH
Confidence            33455789999999876788999999999999999999999999999999999998667999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      ++.++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...+
T Consensus        85 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  164 (495)
T 3b4w_A           85 ERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAV  164 (495)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHH
Confidence            99999999999999999999864699999999999999988877765443334467899999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+||+|.||||+.+|+.|++.
T Consensus       165 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~  243 (495)
T 3b4w_A          165 NKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRR  243 (495)
T ss_dssp             HHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 88899999999999999999999999999999


Q ss_pred             hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240          302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK  381 (392)
Q Consensus       302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~  381 (392)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       244 aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~  322 (495)
T 3b4w_A          244 AAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD  322 (495)
T ss_dssp             HHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred             hhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence            997 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCC
Q 016240          382 GGIQQGPQVNQ  392 (392)
Q Consensus       382 ~~~~~Gpli~~  392 (392)
                      +++++||||++
T Consensus       323 ~~~~~gpli~~  333 (495)
T 3b4w_A          323 PAAQIGPLISE  333 (495)
T ss_dssp             TTCCBCCCSCH
T ss_pred             CCCccCCCcCH
Confidence            99999999973

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=2e-73  Score=581.94  Aligned_cols=326  Identities=43%  Similarity=0.803  Sum_probs=308.3

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|++++++|+++.+
T Consensus        37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~  116 (517)
T 2o2p_A           37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE  116 (517)
T ss_dssp             CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            36899999997666789999999999999999999999999999999999986579999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC----CCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +|++++++|+|||+.++...|+..+++.++|++.+++++.+...+.    ..+...++.++|+|||++|+|||||+...+
T Consensus       117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  196 (517)
T 2o2p_A          117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS  196 (517)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence            9999999999999999864699999999999999998877665443    223357899999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+.++.|..||+||+|+||||+.+|+.|++.
T Consensus       197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~  276 (517)
T 2o2p_A          197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS  276 (517)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             hh-hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          302 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       302 aa-~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      ++ + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus       277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~  355 (517)
T 2o2p_A          277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL  355 (517)
T ss_dssp             HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred             hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            98 6 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      |+++++||||++
T Consensus       356 ~~~~~~Gpli~~  367 (517)
T 2o2p_A          356 ERDTNHGPQNHE  367 (517)
T ss_dssp             STTCCBCCCSSH
T ss_pred             CCCCccCCCcCH
Confidence            999999999973

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=4.3e-73  Score=577.87  Aligned_cols=326  Identities=55%  Similarity=0.960  Sum_probs=309.4

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      .++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus        21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (501)
T 1bxs_A           21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR  100 (501)
T ss_dssp             CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence            468999999987678899999999999999999999999999999999999743 5999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      ++|++++++|+|||+.++...|+..+++.++|++.+.+++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus       101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  180 (501)
T 1bxs_A          101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI  180 (501)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence            99999999999999998766799999999999999998887765554445567899999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh-
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-  303 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa-  303 (392)
                      ++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|..||+||+|+||||+.+|+.|++.++ 
T Consensus       181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~  260 (501)
T 1bxs_A          181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK  260 (501)
T ss_dssp             HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999977788999999999999999999999999999999 


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  339 (501)
T 1bxs_A          261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG  339 (501)
T ss_dssp             T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred             c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence            6 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       340 ~~~Gpli~~  348 (501)
T 1bxs_A          340 VSQGPQIDK  348 (501)
T ss_dssp             CCBCCCSCH
T ss_pred             CccCCCcCH
Confidence            999999973

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=3.5e-73  Score=578.52  Aligned_cols=324  Identities=37%  Similarity=0.645  Sum_probs=309.5

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      ..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  109 (504)
T 3ek1_A           32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA  109 (504)
T ss_dssp             CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999877889999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||+.++.. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus       110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  188 (504)
T 3ek1_A          110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK  188 (504)
T ss_dssp             HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence            99999999999999999764 999999999999999988776655433 3567889999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++
T Consensus       189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa  268 (504)
T 3ek1_A          189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA  268 (504)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999988889999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  347 (504)
T 3ek1_A          269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG  347 (504)
T ss_dssp             G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||+|++
T Consensus       348 ~~~Gpli~~  356 (504)
T 3ek1_A          348 VVIGPMIEE  356 (504)
T ss_dssp             CCBCCCSSH
T ss_pred             CccccccCH
Confidence            999999973

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=5.5e-73  Score=577.24  Aligned_cols=328  Identities=36%  Similarity=0.590  Sum_probs=312.8

Q ss_pred             CCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 016240           60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL  139 (392)
Q Consensus        60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~  139 (392)
                      +.+.+..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.
T Consensus         7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~   84 (497)
T 3k2w_A            7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANK   84 (497)
T ss_dssp             CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred             cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence            3456677899999999877789999999999999999999999999999999999999  99999999999999999999


Q ss_pred             HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHH
Q 016240          140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLL  218 (392)
Q Consensus       140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~  218 (392)
                      |+++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus        85 l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~  163 (497)
T 3k2w_A           85 IRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLA  163 (497)
T ss_dssp             HHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHH
Confidence            999999999999999999999987 599999999999999988877665443 245678899999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240          219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV  298 (392)
Q Consensus       219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i  298 (392)
                      ..++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|
T Consensus       164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i  243 (497)
T 3k2w_A          164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI  243 (497)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999887899999999999999999999999999


Q ss_pred             HHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240          299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       299 ~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~  378 (392)
                      ++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus       244 ~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~  322 (497)
T 3k2w_A          244 YKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD  322 (497)
T ss_dssp             HHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred             HHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence            999987 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCC
Q 016240          379 PFKGGIQQGPQVN  391 (392)
Q Consensus       379 p~~~~~~~Gpli~  391 (392)
                      |+|+++++||+|+
T Consensus       323 p~~~~~~~gpli~  335 (497)
T 3k2w_A          323 PMDADSQMGPKCN  335 (497)
T ss_dssp             TTSTTCSBCCCSC
T ss_pred             CCCCCCccccCcC
Confidence            9999999999997

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-72  Score=577.72  Aligned_cols=325  Identities=41%  Similarity=0.693  Sum_probs=311.3

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~--~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      ...++||||+|+.+.++++++++||.| |+++++++.++.+|+++++++|++||  .  .|+.++.++|.++|+++++.|
T Consensus        21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l   98 (528)
T 3u4j_A           21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLI   98 (528)
T ss_dssp             CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHH
T ss_pred             cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHH
Confidence            356899999999877889999999999 99999999999999999999999999  7  899999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      +++.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+..
T Consensus        99 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~  177 (528)
T 3u4j_A           99 LARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFII  177 (528)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHH
Confidence            9999999999999999999998 57999999999999999988877666544 466789999999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|+
T Consensus       178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~  257 (528)
T 3u4j_A          178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG  257 (528)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP  379 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p  379 (392)
                      +.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       258 ~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  336 (528)
T 3u4j_A          258 EIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP  336 (528)
T ss_dssp             HHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred             HHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCC
Q 016240          380 FKGGIQQGPQVNQ  392 (392)
Q Consensus       380 ~~~~~~~Gpli~~  392 (392)
                      +|+++++||+|++
T Consensus       337 ~~~~~~~Gpli~~  349 (528)
T 3u4j_A          337 LNERTKIGAMISE  349 (528)
T ss_dssp             TSTTCSBCCCSCH
T ss_pred             CCcCCccCCccCH
Confidence            9999999999973

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=7.1e-73  Score=575.72  Aligned_cols=329  Identities=32%  Similarity=0.538  Sum_probs=306.6

Q ss_pred             CCCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 016240           59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD  138 (392)
Q Consensus        59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~  138 (392)
                      +..+....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++
T Consensus        19 ~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~   96 (497)
T 3i44_A           19 PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILE   96 (497)
T ss_dssp             ---CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHH
T ss_pred             CcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHH
Confidence            44444567899999999887888999999999999999999999999999999999999  9999999999999999999


Q ss_pred             HHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEE-ecccceEEEEcCCcccH
Q 016240          139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       139 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~  217 (392)
                      .|+++.++|++++++|+|||+.++...|+..+++.+++++...........+. .+...++. ++|+|||++|+|||||+
T Consensus        97 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~  175 (497)
T 3i44_A           97 IYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPM  175 (497)
T ss_dssp             HHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchH
Confidence            99999999999999999999999875699999999999998776644322221 13445677 99999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.
T Consensus       176 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~  255 (497)
T 3i44_A          176 NQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD  255 (497)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.+++ ++||+++|+|||||+||++||| |.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       256 i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG  333 (497)
T 3i44_A          256 ISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG  333 (497)
T ss_dssp             HHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence            9999997 8999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+|+++++||||++
T Consensus       334 ~p~~~~~~~Gpli~~  348 (497)
T 3i44_A          334 PGHQTGNHIGPVVSK  348 (497)
T ss_dssp             CTTSCSSCBCCCSCH
T ss_pred             CCCCCCCccCCCcCH
Confidence            999999999999973

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=7.3e-73  Score=576.03  Aligned_cols=325  Identities=61%  Similarity=1.026  Sum_probs=308.1

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      ++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++.++|.++|+++++.|+++.+
T Consensus        21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  100 (500)
T 1o04_A           21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT  100 (500)
T ss_dssp             SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            58999999987678899999999999999999999999999999999999732 59999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  225 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  225 (392)
                      +|++++++|+|||+.++...|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus       101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a  180 (500)
T 1o04_A          101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG  180 (500)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence            99999999999999987667999999999999999888776654444455678999999999999999999999999999


Q ss_pred             HHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh-h
Q 016240          226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K  304 (392)
Q Consensus       226 ~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa-~  304 (392)
                      +||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++ +
T Consensus       181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~  260 (500)
T 1o04_A          181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS  260 (500)
T ss_dssp             HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999977788999999999999999999999999999999 6


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus       261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  339 (500)
T 1o04_A          261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT  339 (500)
T ss_dssp             -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       340 ~~Gpli~~  347 (500)
T 1o04_A          340 EQGPQVDE  347 (500)
T ss_dssp             SBCCCSSH
T ss_pred             ccCcccCH
Confidence            99999973

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=1.9e-72  Score=573.67  Aligned_cols=325  Identities=37%  Similarity=0.663  Sum_probs=307.8

Q ss_pred             CCccCceeCCEeeeCCCCCe-eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      +...++||||+|+...++++ ++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+
T Consensus        17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~   94 (503)
T 1a4s_A           17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIR   94 (503)
T ss_dssp             CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHH
Confidence            34457899999998766788 99999999999999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      ++.++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...+
T Consensus        95 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  173 (503)
T 1a4s_A           95 ERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAA  173 (503)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHH
Confidence            9999999999999999999875 599999999999999998876654443334567899999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.++.|..||+||+|+||||+.+|+.|++.
T Consensus       174 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~  252 (503)
T 1a4s_A          174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEM  252 (503)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999977 889999999999999999999999999999


Q ss_pred             hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC
Q 016240          302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK  381 (392)
Q Consensus       302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~  381 (392)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       253 aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  331 (503)
T 1a4s_A          253 SAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL  331 (503)
T ss_dssp             HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred             hhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence            997 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCC
Q 016240          382 GGIQQGPQVNQ  392 (392)
Q Consensus       382 ~~~~~Gpli~~  392 (392)
                      +++++||||++
T Consensus       332 ~~~~~gpli~~  342 (503)
T 1a4s_A          332 TETRMGGLISK  342 (503)
T ss_dssp             TTCCBCCCSCH
T ss_pred             cCCccCCCcCH
Confidence            99999999973

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.1e-73  Score=577.47  Aligned_cols=323  Identities=35%  Similarity=0.633  Sum_probs=308.9

Q ss_pred             CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      +....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+
T Consensus        11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~   88 (517)
T 3r31_A           11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR   88 (517)
T ss_dssp             TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence            44567899999999887889999999999999999999999999999999999999  9999999999999999999999


Q ss_pred             hcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHh----hcCccCCCCCCCeeEEEecccceEEEEcCCcccH
Q 016240          142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       142 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      ++.++|++++++|+|||+.++   |+..+++.++|++.+.++    +.+...+...+. .++.++|+|||++|+|||||+
T Consensus        89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~  164 (517)
T 3r31_A           89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ  164 (517)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence            999999999999999999886   999999999999999988    666655544455 899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+|+.
T Consensus       165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~  243 (517)
T 3r31_A          165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK  243 (517)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 7788999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       244 i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G  322 (517)
T 3r31_A          244 VAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG  322 (517)
T ss_dssp             HHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence            9999998 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+|+++++||||++
T Consensus       323 ~p~~~~~~~Gpli~~  337 (517)
T 3r31_A          323 DPLDYATHLGPLVSK  337 (517)
T ss_dssp             CTTSTTCSBCCBSCH
T ss_pred             CCCCcCCcccCCcCH
Confidence            999999999999973

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=9.8e-73  Score=574.82  Aligned_cols=324  Identities=37%  Similarity=0.611  Sum_probs=308.3

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+...++ +++++||.||+++++++.++.+|+++|+++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus        24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  100 (498)
T 4f3x_A           24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE  100 (498)
T ss_dssp             CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            45689999999987666 999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      .++|++++++|+|||+.++...|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus       101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  180 (498)
T 4f3x_A          101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW  180 (498)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence            999999999999999999845799999999999999988876665442 2456788999999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus       181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a  259 (498)
T 4f3x_A          181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA  259 (498)
T ss_dssp             HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999 999999999998888999999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240          303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG  382 (392)
Q Consensus       303 a~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~  382 (392)
                      ++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus       260 a~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~  338 (498)
T 4f3x_A          260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT  338 (498)
T ss_dssp             HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred             Hh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence            97 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCC
Q 016240          383 GIQQGPQVNQ  392 (392)
Q Consensus       383 ~~~~Gpli~~  392 (392)
                      ++++||||++
T Consensus       339 ~~~~Gpli~~  348 (498)
T 4f3x_A          339 ENEIGPLISR  348 (498)
T ss_dssp             GCSSCCCSCH
T ss_pred             cCccccCcCH
Confidence            9999999973

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=2.9e-72  Score=572.68  Aligned_cols=328  Identities=40%  Similarity=0.715  Sum_probs=309.4

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL  139 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g---~W~~~~~~~R~~~L~~~a~~  139 (392)
                      +...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++|   .|+.++..+|.++|+++++.
T Consensus         5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~   84 (503)
T 3iwj_A            5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK   84 (503)
T ss_dssp             CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred             CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence            344579999999988788999999999999999999999999999999999999743   79999999999999999999


Q ss_pred             HHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccC---C-CCCCCeeEEEecccceEEEEcCCcc
Q 016240          140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---P-ADGPYHVQTLHEPIGVAGQIIPWNF  215 (392)
Q Consensus       140 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~i~p~n~  215 (392)
                      |+++.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...   + ...+...++.++|+|||++|+||||
T Consensus        85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~  163 (503)
T 3iwj_A           85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY  163 (503)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence            999999999999999999999976 5999999999999999888765431   1 1235678899999999999999999


Q ss_pred             cHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHH
Q 016240          216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG  295 (392)
Q Consensus       216 P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g  295 (392)
                      |+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+++|
T Consensus       164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G  243 (503)
T 3iwj_A          164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG  243 (503)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999999999999999877889999999999999999999999


Q ss_pred             HHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       296 ~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      +.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  322 (503)
T 3iwj_A          244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK  322 (503)
T ss_dssp             HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence            999999987 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCCC
Q 016240          376 VGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~~  392 (392)
                      +|||+|+++++||||++
T Consensus       323 ~g~p~~~~~~~gpli~~  339 (503)
T 3iwj_A          323 ISDPLEEGCRLGPVVSE  339 (503)
T ss_dssp             BSCTTSTTCCBCCCSCH
T ss_pred             CCCCCCCCCcccCccCH
Confidence            99999999999999973

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=2.2e-72  Score=574.77  Aligned_cols=323  Identities=41%  Similarity=0.700  Sum_probs=308.2

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.+
T Consensus        27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  104 (515)
T 2d4e_A           27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD  104 (515)
T ss_dssp             BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999876788999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus       105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  183 (515)
T 2d4e_A          105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI  183 (515)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence            999999999999999987 799999999999999988877765543 335567889999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhh
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK  304 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~  304 (392)
                      ++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.+++
T Consensus       184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~  263 (515)
T 2d4e_A          184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD  263 (515)
T ss_dssp             HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred             hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999999997


Q ss_pred             CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCC
Q 016240          305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI  384 (392)
Q Consensus       305 ~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~  384 (392)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus       264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  342 (515)
T 2d4e_A          264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET  342 (515)
T ss_dssp             -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q 016240          385 QQGPQVNQ  392 (392)
Q Consensus       385 ~~Gpli~~  392 (392)
                      ++||||++
T Consensus       343 ~~gpli~~  350 (515)
T 2d4e_A          343 EVGPLIHP  350 (515)
T ss_dssp             SBCCCSCH
T ss_pred             ccCCCcCH
Confidence            99999973

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=8.6e-72  Score=572.43  Aligned_cols=323  Identities=32%  Similarity=0.532  Sum_probs=308.5

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      +..++||||+|+.  ++++++++||.| |+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~  111 (538)
T 3qan_A           36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR  111 (538)
T ss_dssp             EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence            3568999999996  788999999999 999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHH-HHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      +.++|++++++|+|||+.++.. |+..+++.++|++.+ .+...+...+...+...++.++|+|||++|+|||||+...+
T Consensus       112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  190 (538)
T 3qan_A          112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV  190 (538)
T ss_dssp             THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence            9999999999999999999875 999999999999998 56666766665456778999999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.++++.|..||+||+|+||||+.+|+.|++.
T Consensus       191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~  270 (538)
T 3qan_A          191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER  270 (538)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             hhhCC------CccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          302 AAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       302 aa~~~------~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      +++ +      +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       271 aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  349 (538)
T 3qan_A          271 AAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT  349 (538)
T ss_dssp             HTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred             hhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence            987 6      899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCCC
Q 016240          376 VGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~~  392 (392)
                      +|||+|+++++||+|++
T Consensus       350 vG~p~~~~~~~Gpli~~  366 (538)
T 3qan_A          350 VGDPTNRDNYMGPVIDE  366 (538)
T ss_dssp             BSCTTSTTCSBCCCSCH
T ss_pred             CCCCCCCCCCCcCccCH
Confidence            99999999999999973

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-72  Score=572.14  Aligned_cols=327  Identities=26%  Similarity=0.435  Sum_probs=307.6

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      .++...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|
T Consensus        22 s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l   99 (521)
T 4e4g_A           22 SMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLL   99 (521)
T ss_dssp             --CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred             hhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence            335667899999999877789999999999999999999999999999999999999  999999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      +++.++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus       100 ~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~  178 (521)
T 4e4g_A          100 NDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMI  178 (521)
T ss_dssp             HHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHH
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHH
Confidence            99999999999999999999976 599999999999999887776654332 2355678999999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.++.|+.||+||+|+||||+.+|+.|+
T Consensus       179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~  257 (521)
T 4e4g_A          179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVY  257 (521)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999994 55679999999999999999999999999


Q ss_pred             HHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCccCC
Q 016240          300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       300 ~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~vG~  378 (392)
                      +.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++||
T Consensus       258 ~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~  336 (521)
T 4e4g_A          258 GTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP  336 (521)
T ss_dssp             HHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred             HHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence            99997 89999999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CCCCCCccccCCCC
Q 016240          379 PFKGGIQQGPQVNQ  392 (392)
Q Consensus       379 p~~~~~~~Gpli~~  392 (392)
                      |+|+++++||+|++
T Consensus       337 ~~~~~~~~gpli~~  350 (521)
T 4e4g_A          337 YTDEKADMGPVVTK  350 (521)
T ss_dssp             TTCTTCSBCCCSCH
T ss_pred             CCCccCccCCCCCH
Confidence            99999999999973

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=6.8e-72  Score=568.26  Aligned_cols=323  Identities=38%  Similarity=0.656  Sum_probs=305.4

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      ..++||||+|+...+ ++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   99 (495)
T 1wnd_A           23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG   99 (495)
T ss_dssp             CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            357899999997655 8899999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||+.++...|+..+++.++|++++++++.++..+.. .+...++.++|+|||++|+|||||+...+++
T Consensus       100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  179 (495)
T 1wnd_A          100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  179 (495)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence            999999999999999987644999999999999999888766554432 2446788999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.++
T Consensus       180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa  258 (495)
T 1wnd_A          180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA  258 (495)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999 9999999999977788999999999999999999999999999999


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  337 (495)
T 1wnd_A          259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES  337 (495)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred             h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||||++
T Consensus       338 ~~~Gpli~~  346 (495)
T 1wnd_A          338 TELGPLSSL  346 (495)
T ss_dssp             CCBCCCSCH
T ss_pred             CCccCCCCH
Confidence            999999973

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=7.9e-72  Score=566.93  Aligned_cols=324  Identities=35%  Similarity=0.600  Sum_probs=307.3

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      +.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   83 (479)
T 2imp_A            6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA   83 (479)
T ss_dssp             ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999866778999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...+..++|+|||++|+|||||+...+++
T Consensus        84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  162 (479)
T 2imp_A           84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK  162 (479)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence            9999999999999999976 6999999999999998887766654432 3456789999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus       163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa  242 (479)
T 2imp_A          163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA  242 (479)
T ss_dssp             HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999977778999999999999999999999999999999


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCC-C
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G  382 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~-~  382 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+| +
T Consensus       243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  321 (479)
T 2imp_A          243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN  321 (479)
T ss_dssp             T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred             c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence            7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9


Q ss_pred             CCccccCCCC
Q 016240          383 GIQQGPQVNQ  392 (392)
Q Consensus       383 ~~~~Gpli~~  392 (392)
                      ++++||||++
T Consensus       322 ~~~~gpli~~  331 (479)
T 2imp_A          322 DIAMGPLINA  331 (479)
T ss_dssp             SCSBCCCSSH
T ss_pred             CCccCCCcCH
Confidence            9999999973

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=8.9e-72  Score=566.80  Aligned_cols=324  Identities=39%  Similarity=0.682  Sum_probs=309.0

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.
T Consensus         9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   86 (481)
T 3jz4_A            9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ   86 (481)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999877889999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||..++. .|+..+++.++|++.+..+..+...+.. .+...++.++|+|||++|+|||||++..+++
T Consensus        87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  165 (481)
T 3jz4_A           87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK  165 (481)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence            9999999999999999976 5999999999999998887766554432 4567789999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++.++
T Consensus       166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa  245 (481)
T 3jz4_A          166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA  245 (481)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988889999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  324 (481)
T 3jz4_A          246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG  324 (481)
T ss_dssp             T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred             h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++||++++
T Consensus       325 ~~~gpli~~  333 (481)
T 3jz4_A          325 VTIGPLIDE  333 (481)
T ss_dssp             CCBCCCSCH
T ss_pred             CccccccCH
Confidence            999999973

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=1.4e-71  Score=567.14  Aligned_cols=322  Identities=34%  Similarity=0.513  Sum_probs=305.1

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   87 (505)
T 3prl_A           10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER   87 (505)
T ss_dssp             EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence            345899999999877789999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--C----CCeeEEEecccceEEEEcCCcccH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      .++|++++++|+|||+.++.. |+..+++.++|++.+.+++.+...+..  .    +...++.++|+|||++|+|||||+
T Consensus        88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~  166 (505)
T 3prl_A           88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV  166 (505)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred             HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence            999999999999999999874 999999999999999888766544322  1    456788999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|.||||+.+|+.
T Consensus       167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~  246 (505)
T 3prl_A          167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER  246 (505)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999987889999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g  323 (505)
T 3prl_A          247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG  323 (505)
T ss_dssp             HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred             HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence            999886   79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+ +++++||+|++
T Consensus       324 ~p~-~~~~~gpli~~  337 (505)
T 3prl_A          324 SPE-DDADITPVIDE  337 (505)
T ss_dssp             CTT-TTCSBCCCSCH
T ss_pred             CCC-CcCcCCcccCH
Confidence            999 99999999973

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=3.4e-71  Score=562.79  Aligned_cols=321  Identities=37%  Similarity=0.620  Sum_probs=304.8

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND  145 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~  145 (392)
                      .++||||+|+...  ++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.+
T Consensus        13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   88 (487)
T 2w8n_A           13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD   88 (487)
T ss_dssp             CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999643  7899999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHHHHH
Q 016240          146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  224 (392)
Q Consensus       146 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  224 (392)
                      +|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus        89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  167 (487)
T 2w8n_A           89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV  167 (487)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence            999999999999999986 499999999999999988877665443 235677899999999999999999999999999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEe---CCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      ++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+   |++.+.++.|..||+||+|+||||+.+|+.|++.
T Consensus       168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~  247 (487)
T 2w8n_A          168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH  247 (487)
T ss_dssp             HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999   8667789999999999999999999999999999


Q ss_pred             hhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc-CccCCCC
Q 016240          302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF  380 (392)
Q Consensus       302 aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~-~~vG~p~  380 (392)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||+
T Consensus       248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~  326 (487)
T 2w8n_A          248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF  326 (487)
T ss_dssp             HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred             Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence            997 89999999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             CCCCccccCCCC
Q 016240          381 KGGIQQGPQVNQ  392 (392)
Q Consensus       381 ~~~~~~Gpli~~  392 (392)
                      |+++++||||++
T Consensus       327 ~~~~~~gpli~~  338 (487)
T 2w8n_A          327 EEGTTQGPLINE  338 (487)
T ss_dssp             STTCCBCCCSSH
T ss_pred             cccCcccCCCCH
Confidence            999999999973

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=6.3e-71  Score=561.37  Aligned_cols=324  Identities=30%  Similarity=0.492  Sum_probs=305.7

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      +..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus         5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (485)
T 4dng_A            5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN   82 (485)
T ss_dssp             GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence            346899999999877889999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--CCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      .++|++++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+..  .+...++.++|+|||++|+|||||+...+
T Consensus        83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  161 (485)
T 4dng_A           83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM  161 (485)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence            999999999999999999875 999999999999999888777655532  35678999999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      +++++||++||+||+|||+.+|+++ .+|.++|.++|+|+|+||+|+|++.+.++.|..||+||+|.||||+.+|+.|++
T Consensus       162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~  241 (485)
T 4dng_A          162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE  241 (485)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence            9999999999999999999999999 999999999999999999999977778999999999999999999999999999


Q ss_pred             HhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCC
Q 016240          301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF  380 (392)
Q Consensus       301 ~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~  380 (392)
                      .+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus       242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~  320 (485)
T 4dng_A          242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT  320 (485)
T ss_dssp             HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred             HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence            9987 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCC
Q 016240          381 KGGIQQGPQVN  391 (392)
Q Consensus       381 ~~~~~~Gpli~  391 (392)
                      |+++++||+++
T Consensus       321 ~~~~~~gpli~  331 (485)
T 4dng_A          321 DPKTVVGPLIN  331 (485)
T ss_dssp             STTCSBCCCSS
T ss_pred             cCCCccCCCCC
Confidence            99999999997

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=5.2e-71  Score=561.02  Aligned_cols=322  Identities=34%  Similarity=0.567  Sum_probs=305.8

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus         6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   83 (478)
T 3ty7_A            6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR   83 (478)
T ss_dssp             ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            456899999999987889999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      .++|++++++|+|||+.++...|+..+++.+++++...+++.+...    +...++.++|+|||++|+|||||+...+++
T Consensus        84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  159 (478)
T 3ty7_A           84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK  159 (478)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence            9999999999999999998567999999999999999888765432    235788999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.|++.++
T Consensus       160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa  239 (478)
T 3ty7_A          160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA  239 (478)
T ss_dssp             HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred             HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988789999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  318 (478)
T 3ty7_A          240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG  318 (478)
T ss_dssp             T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC
Q 016240          384 IQQGPQVNQ  392 (392)
Q Consensus       384 ~~~Gpli~~  392 (392)
                      +++|||+++
T Consensus       319 ~~~gpli~~  327 (478)
T 3ty7_A          319 TQVGPIISK  327 (478)
T ss_dssp             CCBCCCSCH
T ss_pred             CccCCCcCH
Confidence            999999973

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.5e-70  Score=560.69  Aligned_cols=328  Identities=35%  Similarity=0.571  Sum_probs=309.8

Q ss_pred             CCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      ..+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|
T Consensus         8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l   85 (508)
T 3r64_A            8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL   85 (508)
T ss_dssp             TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence            456667899999999877889999999999999999999999999999999999999  999999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC--CCCeeEEEecccceEEEEcCCcccHH
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL  218 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~  218 (392)
                      +++.++|++++++|+|||..++.. |+..+++.++|++.+.+++.+ ..+..  .+...++.++|+|||++|+|||||+.
T Consensus        86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~  163 (508)
T 3r64_A           86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN  163 (508)
T ss_dssp             HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence            999999999999999999999875 999999999999998877665 44422  35678899999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ..++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|.||||+.+|+.
T Consensus       164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~  243 (508)
T 3r64_A          164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR  243 (508)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence            9999999999999999999999999999 999999999999999999999977888999999999999999999999999


Q ss_pred             HHHHhhhC-CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       298 i~~~aa~~-~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      |++.+++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  323 (508)
T 3r64_A          244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT  323 (508)
T ss_dssp             HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred             HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence            99988742 68999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCCC
Q 016240          377 GDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       377 G~p~~~~~~~Gpli~~  392 (392)
                      |||+|+++++||||++
T Consensus       324 G~p~~~~~~~gpli~~  339 (508)
T 3r64_A          324 GDPSAEGTLVGPVIND  339 (508)
T ss_dssp             SCTTSSSCCBCCCSCH
T ss_pred             CCCccCCCcccCCCCH
Confidence            9999999999999973

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=1.2e-70  Score=562.33  Aligned_cols=321  Identities=31%  Similarity=0.492  Sum_probs=303.1

Q ss_pred             cCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      .++||||+|+.  ++++++++||. ||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.
T Consensus        38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  113 (516)
T 1uzb_A           38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK  113 (516)
T ss_dssp             ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            47899999995  46799999999 6999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC--CCCCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      ++|++++++|+|||+.++. .|+..+++.++||+...+++.+...+  ...+...++.++|+|||++|+|||||+...++
T Consensus       114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  192 (516)
T 1uzb_A          114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG  192 (516)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence            9999999999999999986 69999999999999999888765532  22345678899999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus       193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a  272 (516)
T 1uzb_A          193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA  272 (516)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999997778899999999999999999999999999998


Q ss_pred             hh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       303 a~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      +.     +++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G  352 (516)
T 1uzb_A          273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG  352 (516)
T ss_dssp             TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred             hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence            81     3799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      || ++++++||||++
T Consensus       353 ~p-~~~~~~Gpli~~  366 (516)
T 1uzb_A          353 PA-EENPDLGPVVSA  366 (516)
T ss_dssp             CG-GGCCSBCCCSCH
T ss_pred             CC-ccccccCCCCCH
Confidence            99 999999999973

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=1.3e-70  Score=557.78  Aligned_cols=314  Identities=30%  Similarity=0.530  Sum_probs=294.4

Q ss_pred             ceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 016240           68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI  147 (392)
Q Consensus        68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l  147 (392)
                      +||||+|+.+  ++ ++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|
T Consensus         2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   76 (486)
T 3pqa_A            2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL   76 (486)
T ss_dssp             -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999964  56 99999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHH
Q 016240          148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA  227 (392)
Q Consensus       148 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  227 (392)
                      ++++++|+|||..++. .|+..+++.++|++.+.+++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus        77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A  154 (486)
T 3pqa_A           77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA  154 (486)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999976 5999999999999999988876665543 5678899999999999999999999999999999


Q ss_pred             HhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       228 LaaGN~VIlKps~~~p~t~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      |++||+||+|||+.+|+++..+++++.++    |+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus       155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa  234 (486)
T 3pqa_A          155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG  234 (486)
T ss_dssp             HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred             HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence            99999999999999999999999999999    99999999999988888999999999999999999999999999875


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                         +||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  311 (486)
T 3pqa_A          235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK  311 (486)
T ss_dssp             ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence               79999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCC
Q 016240          384 IQQGPQVN  391 (392)
Q Consensus       384 ~~~Gpli~  391 (392)
                      +++||||+
T Consensus       312 ~~~gpli~  319 (486)
T 3pqa_A          312 TDVGPLIS  319 (486)
T ss_dssp             CSBCCCSC
T ss_pred             CCcCCCCC
Confidence            99999997

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.7e-70  Score=557.81  Aligned_cols=322  Identities=30%  Similarity=0.486  Sum_probs=303.8

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      ..++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.
T Consensus         5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   82 (486)
T 1t90_A            5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK   82 (486)
T ss_dssp             BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred             ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999876788999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-CCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.++..+ ...+...+..++|+|||++|+|||||+...+++
T Consensus        83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  161 (486)
T 1t90_A           83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM  161 (486)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence            9999999999999999875 69999999999999877776665433 123456788999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.+..|+.||+||+|.||||+.+|+.|++.++
T Consensus       162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa  240 (486)
T 1t90_A          162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS  240 (486)
T ss_dssp             HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999 5678999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcE-EEEeCcchHHHHHHHHHHHhcCccCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG  382 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~  382 (392)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|||+|+
T Consensus       241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~  318 (486)
T 1t90_A          241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD  318 (486)
T ss_dssp             H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred             c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence            7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999


Q ss_pred             CCccccCCCC
Q 016240          383 GIQQGPQVNQ  392 (392)
Q Consensus       383 ~~~~Gpli~~  392 (392)
                      ++++||+|++
T Consensus       319 ~~~~gpli~~  328 (486)
T 1t90_A          319 GVFLGPVIRE  328 (486)
T ss_dssp             TCCBCCCSCH
T ss_pred             CCccCCCCCH
Confidence            9999999973

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=1.3e-70  Score=557.34  Aligned_cols=320  Identities=30%  Similarity=0.485  Sum_probs=300.7

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      +.+++||||+|+.+.+  +++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus         3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   78 (475)
T 1euh_A            3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD   78 (475)
T ss_dssp             CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence            3457899999997533  999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CC----Cee-EEEecccceEEEEcCCcccH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~  217 (392)
                      .++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+    ... ++.++|+|||++|+|||||+
T Consensus        79 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  157 (475)
T 1euh_A           79 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV  157 (475)
T ss_dssp             HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence            99999999999999999975 5999999999999998887765543322 23    456 89999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.++.|..||+||+|+||||+.+|+.
T Consensus       158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~  237 (475)
T 1euh_A          158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER  237 (475)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence            99999999999999999999999999999999999999999999999999976778999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g  314 (475)
T 1euh_A          238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  314 (475)
T ss_dssp             HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence            999876   79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+| ++++|||+++
T Consensus       315 ~p~~-~~~~gpli~~  328 (475)
T 1euh_A          315 NPED-DADITPLIDT  328 (475)
T ss_dssp             CGGG-TCSBCCCSCH
T ss_pred             Cccc-cCccCCCCCH
Confidence            9999 9999999973

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=3.7e-70  Score=556.85  Aligned_cols=322  Identities=28%  Similarity=0.482  Sum_probs=302.6

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ..++.||||+|+.  ++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus        22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   97 (500)
T 2j6l_A           22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK   97 (500)
T ss_dssp             SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence            3578999999994  678999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCC-CCCeeEEEecccceEEEEcCCcccHHHHHH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW  222 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  222 (392)
                      .++|++++++|+|||+.++ ..|+..+++.++|++.+.+++.+...+.. .+...+..++|+|||++|+|||||+...++
T Consensus        98 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  176 (500)
T 2j6l_A           98 IQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW  176 (500)
T ss_dssp             HHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence            9999999999999999987 46999999999999998877766554432 244567889999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240          223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV  298 (392)
Q Consensus       223 ~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i  298 (392)
                      ++++||++||+||+|||+.+|+++..+++++.    ++|+|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|
T Consensus       177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i  255 (500)
T 2j6l_A          177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV  255 (500)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred             HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            99999999999999999999999999988876    46999999999999 77889999999999999999999999999


Q ss_pred             HHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240          299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       299 ~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~  378 (392)
                      ++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus       256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  334 (500)
T 2j6l_A          256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN  334 (500)
T ss_dssp             HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred             HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence            999998 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCC
Q 016240          379 PFKGGIQQGPQVNQ  392 (392)
Q Consensus       379 p~~~~~~~Gpli~~  392 (392)
                      |.|+++++|||+++
T Consensus       335 p~~~~~~~gpli~~  348 (500)
T 2j6l_A          335 PWDPNVLYGPLHTK  348 (500)
T ss_dssp             TTSTTCCBCCCSCH
T ss_pred             cccCCCccccCCCH
Confidence            99999999999973

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=2.2e-70  Score=558.22  Aligned_cols=322  Identities=28%  Similarity=0.389  Sum_probs=302.3

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      +...++||||+|+.. + ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|+++++.|++
T Consensus        16 ~~~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~   92 (501)
T 1uxt_A           16 VPVYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIER   92 (501)
T ss_dssp             EEEECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             CcccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHH
Confidence            335578999999975 3 78999999999999999999999999999999999862 49999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC---CC--CCeeEEEecccceEEEEcCCcccH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      +.++|++++++|+|||+.++. .|+..+++.++|++.+.+++.+...+.   ..  +...++.++|+|||++|+|||||+
T Consensus        93 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  171 (501)
T 1uxt_A           93 NLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL  171 (501)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHH
Confidence            999999999999999999987 699999999999999988876655443   22  336789999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.++.|..||+||+|+||||+.+|+.
T Consensus       172 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~  250 (501)
T 1uxt_A          172 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGER  250 (501)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999976 88999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       251 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g  327 (501)
T 1uxt_A          251 VVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG  327 (501)
T ss_dssp             HHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred             HHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence            999886   79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      ||+|+++++||||++
T Consensus       328 ~p~~~~~~~Gpli~~  342 (501)
T 1uxt_A          328 DPRDPTVDVGPLISP  342 (501)
T ss_dssp             CTTSTTCSBCCCSCH
T ss_pred             CccccCCcccCCCCH
Confidence            999999999999973

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.2e-69  Score=548.93  Aligned_cols=319  Identities=32%  Similarity=0.448  Sum_probs=301.9

Q ss_pred             CceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 016240           67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE  146 (392)
Q Consensus        67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~  146 (392)
                      ++||||+|+.. +++++.++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++
T Consensus         7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   83 (490)
T 3ju8_A            7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE   83 (490)
T ss_dssp             CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999975 457899999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHH
Q 016240          147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP  226 (392)
Q Consensus       147 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  226 (392)
                      |++++++|+|||+.++. .|+..+++.++|++...+.+.+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus        84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  162 (490)
T 3ju8_A           84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP  162 (490)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence            99999999999999986 59999999999999988887766543223445677799999999999999999999999999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCC
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN  306 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~  306 (392)
                      ||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.++.|..||+||+|+||||+.+|+.|++.+++ +
T Consensus       163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~  240 (490)
T 3ju8_A          163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q  240 (490)
T ss_dssp             HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred             HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence            999999999999999999999999999999999999999999 67889999999999999999999999999999987 8


Q ss_pred             CccE-EEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcc-hHHHHHHHHHHHhcCccCC-CCCCC
Q 016240          307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG  383 (392)
Q Consensus       307 ~~~v-~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~L~~~~~~~~vG~-p~~~~  383 (392)
                      ++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|| |.|++
T Consensus       241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~  320 (490)
T 3ju8_A          241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA  320 (490)
T ss_dssp             TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred             CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence            8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999


Q ss_pred             CccccCCC
Q 016240          384 IQQGPQVN  391 (392)
Q Consensus       384 ~~~Gpli~  391 (392)
                      +++|||++
T Consensus       321 ~~~Gpli~  328 (490)
T 3ju8_A          321 PFMGAVIS  328 (490)
T ss_dssp             CSBCCCSC
T ss_pred             CccccccC
Confidence            99999997

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=1.7e-69  Score=549.15  Aligned_cols=306  Identities=27%  Similarity=0.449  Sum_probs=294.6

Q ss_pred             eeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhh
Q 016240           82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ  161 (392)
Q Consensus        82 ~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~  161 (392)
                      +++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e   82 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE   82 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence            489999999999999999999999999999999999  999999999999999999999999999999999999999999


Q ss_pred             hhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCC
Q 016240          162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ  241 (392)
Q Consensus       162 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  241 (392)
                      +. .|+..+++.++|++..++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~  161 (484)
T 3ros_A           83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN  161 (484)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            87 69999999999999999988776555445678899999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       242 ~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      +|+++..|++++.++|+|+|++|+|+|++.+.++ |..||+||+|+||||+.+|+.|++.+++ ++||+++|+|||||+|
T Consensus       162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i  239 (484)
T 3ros_A          162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI  239 (484)
T ss_dssp             CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred             ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence            9999999999999999999999999997777788 9999999999999999999999999998 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      |++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||||++
T Consensus       240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  310 (484)
T 3ros_A          240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSE  310 (484)
T ss_dssp             ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCH
T ss_pred             eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999973

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=2.1e-68  Score=548.79  Aligned_cols=324  Identities=26%  Similarity=0.342  Sum_probs=301.3

Q ss_pred             CCccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016240           63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE  141 (392)
Q Consensus        63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~  141 (392)
                      ...+++||||+|+.+  +..+.++||.| |+++++++.++.+|+++|+++|++||+  .|+.++.++|.++|++++++|+
T Consensus        61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~  136 (563)
T 4e3x_A           61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS  136 (563)
T ss_dssp             CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            356789999999974  34678999998 899999999999999999999999999  9999999999999999999999


Q ss_pred             hc-HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHH
Q 016240          142 RH-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM  219 (392)
Q Consensus       142 ~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~  219 (392)
                      ++ +++|+.++++|+|||+.++...++..+++.++|++.+++++.+..... ..+...+.++.|+|||++|+|||||+..
T Consensus       137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~  216 (563)
T 4e3x_A          137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG  216 (563)
T ss_dssp             TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred             hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence            98 999999999999999999876459999999999999998887654322 2234456677788999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHH
Q 016240          220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL  299 (392)
Q Consensus       220 ~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~  299 (392)
                      ..++++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+|++|.||||+.+|+.|+
T Consensus       217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~  295 (563)
T 4e3x_A          217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW  295 (563)
T ss_dssp             HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            999999999 6999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHhhhCCCc------cEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       300 ~~aa~~~~~------~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      +.+++ +++      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus       296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~  374 (563)
T 4e3x_A          296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR  374 (563)
T ss_dssp             HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred             HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence            99997 777      49999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCC-CCCCCccccCCCC
Q 016240          374 RVVGDP-FKGGIQQGPQVNQ  392 (392)
Q Consensus       374 ~~vG~p-~~~~~~~Gpli~~  392 (392)
                      +++||| +|++++|||||++
T Consensus       375 l~vGdp~~d~~~~~Gpli~~  394 (563)
T 4e3x_A          375 IKVGDPAEDFGTFFSAVIDA  394 (563)
T ss_dssp             CCBSCTTTCTTCSBCCCSCH
T ss_pred             ccCCCcccCcCCccCCCcCH
Confidence            999999 9999999999973

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=1.2e-67  Score=571.30  Aligned_cols=324  Identities=31%  Similarity=0.501  Sum_probs=307.1

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      ...++||||+|+.  ++++++++||.| ++++++++.++.+++++|+++|++||+  .|+.+++++|.++|++++++|++
T Consensus       530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~  605 (1026)
T 4f9i_A          530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK  605 (1026)
T ss_dssp             EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence            3568999999996  578999999998 999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCC-CCCCeeEEEecccceEEEEcCCcccHHHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA  221 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  221 (392)
                      ++++|+.++++|+|||+.++. .|+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+...+
T Consensus       606 ~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~  684 (1026)
T 4f9i_A          606 RLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM  684 (1026)
T ss_dssp             THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence            999999999999999999976 599999999999999998887654332 346678889999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHH
Q 016240          222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL  301 (392)
Q Consensus       222 ~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~  301 (392)
                      +++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|+.||+|++|+||||+++|+.|++.
T Consensus       685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~  764 (1026)
T 4f9i_A          685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER  764 (1026)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             hhh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       302 aa~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      ++.     +++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus       765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v  844 (1026)
T 4f9i_A          765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV  844 (1026)
T ss_dssp             HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred             hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence            883     368999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCCC
Q 016240          377 GDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       377 G~p~~~~~~~Gpli~~  392 (392)
                      |||.|+++++||||++
T Consensus       845 G~p~d~~t~~Gpvi~~  860 (1026)
T 4f9i_A          845 GPSEDPANYMGAVADD  860 (1026)
T ss_dssp             CCTTSTTCSBCCCSSH
T ss_pred             CCcccccCccccccCH
Confidence            9999999999999973

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=4.4e-67  Score=530.31  Aligned_cols=308  Identities=28%  Similarity=0.450  Sum_probs=293.0

Q ss_pred             CCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC
Q 016240           79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP  158 (392)
Q Consensus        79 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~  158 (392)
                      +..+++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|+++++.|+|||
T Consensus         5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~   82 (462)
T 3etf_A            5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP   82 (462)
T ss_dssp             -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred             ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            456799999999999999999999999999999999999  999999999999999999999999999999999999999


Q ss_pred             hhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEec
Q 016240          159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT  238 (392)
Q Consensus       159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKp  238 (392)
                      ..++. .|+..+++.++|++.+.+++.+.......+...++.++|+|||++|+|||||++..++++++||++||+||+||
T Consensus        83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp  161 (462)
T 3etf_A           83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH  161 (462)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence            99976 59999999999999998887765532223566789999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC
Q 016240          239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS  318 (392)
Q Consensus       239 s~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~  318 (392)
                      |+.+|+++..|+++|.++|+|+|++|+|+| +.+.+..|+.||+|+.|+||||+.+|+.|++.+++ +++|+++|+||||
T Consensus       162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~  239 (462)
T 3etf_A          162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD  239 (462)
T ss_dssp             CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred             CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence            999999999999999999999999999998 45778899999999999999999999999999998 8999999999999


Q ss_pred             cEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       319 ~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      |+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++|||++
T Consensus       240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~  312 (462)
T 3etf_A          240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMAR  312 (462)
T ss_dssp             EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSC
T ss_pred             ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999997

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=4e-67  Score=538.77  Aligned_cols=319  Identities=25%  Similarity=0.347  Sum_probs=290.1

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      ..++||||+|+...+ .+++++||.||+++++++.++ +|+++++++|++| |+  .|+.++.++|.++|+++++.|+++
T Consensus         7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (534)
T 2y53_A            7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK   82 (534)
T ss_dssp             ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence            457899999997543 589999999999999999987 9999999999999 58  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCc-------cCCCC--CCCeeEEEeccc-ceEEEEcCC
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-------TAPAD--GPYHVQTLHEPI-GVAGQIIPW  213 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-GVv~~i~p~  213 (392)
                      .++|++++++|+|||+.++. .|+..+++.++||+.+.+++.+.       ..+..  .....+..++|+ |||++|+||
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw  161 (534)
T 2y53_A           83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF  161 (534)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence            99999999999999999986 59999999999999988776432       11221  122457889997 999999999


Q ss_pred             cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCchhHHHHHHcC-CCcCEEEeeCC
Q 016240          214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGS  291 (392)
Q Consensus       214 n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~l~~~-~~vd~V~ftGs  291 (392)
                      |||+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|++.+    +..+ +++|+|+||||
T Consensus       162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS  237 (534)
T 2y53_A          162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS  237 (534)
T ss_dssp             TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred             chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence            99999999999999999999999999999999999999999999 899999999986543    3333 57999999999


Q ss_pred             hHHHHHHHHHhh-hCCCccEEEecCCCCcEEEcCCC-----CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHH
Q 016240          292 TTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE  365 (392)
Q Consensus       292 ~~~g~~i~~~aa-~~~~~~v~lelgG~~~~iV~~dA-----Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~  365 (392)
                      +.+|+.|++.++ ..++||+++|+|||||+||++||     |+|.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus       238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~  317 (534)
T 2y53_A          238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE  317 (534)
T ss_dssp             HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred             HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence            999999998875 23899999999999999999999     999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          366 KANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       366 ~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +|+++++++++|||+|+++++||||++
T Consensus       318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~  344 (534)
T 2y53_A          318 ALKAKLAKITVGNPRNDAVRMGSLVSR  344 (534)
T ss_dssp             HHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred             HHHHHHHhccCCCCCcCCCCccCCCCH
Confidence            999999999999999999999999973

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1e-65  Score=521.38  Aligned_cols=306  Identities=27%  Similarity=0.369  Sum_probs=286.0

Q ss_pred             CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 016240           78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK  157 (392)
Q Consensus        78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  157 (392)
                      ...++++++||+||+++++++.++.+|+++++++|++||+  .|++++.++|.++|+++++.|++|.++|++++++|+||
T Consensus         3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk   80 (474)
T 4h7n_A            3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR   80 (474)
T ss_dssp             CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred             CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999999  99999999999999999999999999999999999999


Q ss_pred             ChhhhhhhchhHHHHHHHHHHHHHHhhcCccC-C-CCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEE
Q 016240          158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV  235 (392)
Q Consensus       158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VI  235 (392)
                      +... . .|+...++.+++++....++..... + ...+...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus        81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV  158 (474)
T 4h7n_A           81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV  158 (474)
T ss_dssp             SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred             cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence            8644 3 5999999999999988877654322 2 123455677889999999999999999999999999999999999


Q ss_pred             EecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC
Q 016240          236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG  315 (392)
Q Consensus       236 lKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg  315 (392)
                      +|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|..|  +|+|.||||+.+|+.|++.+++ ++||+++|+|
T Consensus       159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG  234 (474)
T 4h7n_A          159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG  234 (474)
T ss_dssp             EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred             ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence            999999999999999999999999999999999 56778888876  9999999999999999999998 8999999999


Q ss_pred             CCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       316 G~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      ||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+++
T Consensus       235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  310 (474)
T 4h7n_A          235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIA  310 (474)
T ss_dssp             CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSS
T ss_pred             CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999997

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-64  Score=517.03  Aligned_cols=315  Identities=24%  Similarity=0.328  Sum_probs=285.9

Q ss_pred             CCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 016240           62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL  140 (392)
Q Consensus        62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l  140 (392)
                      +....++||||+|+.+.+     ++||.||++++ +++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|
T Consensus        26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l   98 (528)
T 3v4c_A           26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEI   98 (528)
T ss_dssp             CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHH
T ss_pred             cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence            445568999999996432     99999999998 9999999999999999999999  999999999999999999999


Q ss_pred             HhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh--cCccC----CC---CCCCeeEEEecccceEEEEc
Q 016240          141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQII  211 (392)
Q Consensus       141 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~  211 (392)
                      +++.++|++++++|+|||+.++. .|+..+++.++||+...++.  .+...    +.   ..+...++.++|+|||++|+
T Consensus        99 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~  177 (528)
T 3v4c_A           99 EARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG  177 (528)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence            99999999999999999998876 59999999999999988872  22221    11   12345688999999999999


Q ss_pred             CCcccHHHHH--HHHHHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCE
Q 016240          212 PWNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDK  285 (392)
Q Consensus       212 p~n~P~~~~~--~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~  285 (392)
                      |||||+...+  +++++||++||+||+|||+.+|+++..+++++    .++|+|+|+||+|+|++.+.++.|+.||+||+
T Consensus       178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~  257 (528)
T 3v4c_A          178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA  257 (528)
T ss_dssp             CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred             CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence            9999999865  99999999999999999999999999999875    46899999999999988889999999999999


Q ss_pred             EEeeCChHHHHHHHHHhhhCCC--ccEEEecCCCCcEEEcCCC---CHHHHHHHHHHHHHhccCCcccCCcEEEEeCc-c
Q 016240          286 LAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-V  359 (392)
Q Consensus       286 V~ftGs~~~g~~i~~~aa~~~~--~~v~lelgG~~~~iV~~dA---Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i  359 (392)
                      |+||||+.+|+.|++.+++ ++  ||+++|+|||||+||++||   |+|.|++.+++++|+|+||.|++++|||||++ +
T Consensus       258 V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i  336 (528)
T 3v4c_A          258 VGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGAD  336 (528)
T ss_dssp             EEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHH
T ss_pred             EEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccH
Confidence            9999999999999999997 77  9999999999999999999   88999999999999999999999999999997 9


Q ss_pred             hHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       360 ~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      ||+|+++|++++++++.|      +.+||+++
T Consensus       337 ~d~f~~~l~~~~~~~~~~------~~~gp~~~  362 (528)
T 3v4c_A          337 ADRFTTAAVEALAKVAPQ------TMLTDGIA  362 (528)
T ss_dssp             HHHHHHHHHHHHHTCCCE------ECSCHHHH
T ss_pred             HHHHHHHHHHHHHhcccC------CCCCHHHH
Confidence            999999999999998754      56788764

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=2.3e-63  Score=501.97  Aligned_cols=302  Identities=27%  Similarity=0.385  Sum_probs=266.6

Q ss_pred             CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh
Q 016240           80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF  159 (392)
Q Consensus        80 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  159 (392)
                      -..+++.||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||+
T Consensus         5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   82 (457)
T 3lns_A            5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK   82 (457)
T ss_dssp             ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred             cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence            35688999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhHHHHHHHHHHHHHHhhcCc-cCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEE
Q 016240          160 EQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV  235 (392)
Q Consensus       160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VI  235 (392)
                      .++...|+..+++.++|++...+++.+. ..+.   ..+...++.++|+|||++|+|||||+...++++++||++||+||
T Consensus        83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV  162 (457)
T 3lns_A           83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI  162 (457)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence            9987569999999999999988876543 2221   13467889999999999999999999999999999999999999


Q ss_pred             EecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC
Q 016240          236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG  315 (392)
Q Consensus       236 lKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg  315 (392)
                      +|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+. ++||+|+||||+++|+.|++.+++ ++||+++|+|
T Consensus       163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElG  238 (457)
T 3lns_A          163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELG  238 (457)
T ss_dssp             EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECC
T ss_pred             EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECC
Confidence            999999999999999999998 99999999999 6778889988 689999999999999999999997 8999999999


Q ss_pred             CCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       316 G~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      ||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++++   |.++  ++|||+++
T Consensus       239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~  310 (457)
T 3lns_A          239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTE  310 (457)
T ss_dssp             CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSH
T ss_pred             CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999987   7776  99999973

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=1.6e-62  Score=502.00  Aligned_cols=297  Identities=23%  Similarity=0.334  Sum_probs=272.4

Q ss_pred             CCCCCeeeeeCCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc
Q 016240           77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN  155 (392)
Q Consensus        77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~  155 (392)
                      +.++++++++||.||+++ ++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+
T Consensus         3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~   80 (510)
T 1ez0_A            3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET   80 (510)
T ss_dssp             --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            346788999999999999 79999999999999999999999  999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhchhHHHHHHHHHHHHHHh--hcCccC----CC--CCC-CeeEEEecccceEEEEcCCcccHHHH--HHHH
Q 016240          156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV  224 (392)
Q Consensus       156 Gk~~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~  224 (392)
                      |||+.++. .|+..+++.++||+...++  ..+..+    +.  ..+ ...+..++|+|||++|+|||||+...  .+++
T Consensus        81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (510)
T 1ez0_A           81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT  159 (510)
T ss_dssp             CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred             CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence            99998864 5999999999999998876  333222    11  111 23578999999999999999999985  4999


Q ss_pred             HHHHhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       225 ~~ALaaGN~VIlKps~~~p~t~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|++
T Consensus       160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~  239 (510)
T 1ez0_A          160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN  239 (510)
T ss_dssp             HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence            99999999999999999999999999998    56799999999999977788999999999999999999999999999


Q ss_pred             HhhhCCC--ccEEEecCCCCcEEEcCCCCHH--HHHHHHHHHHHhccCCcccCCcEEEEeCc-chHHHHHHHHHHHhcCc
Q 016240          301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV  375 (392)
Q Consensus       301 ~aa~~~~--~~v~lelgG~~~~iV~~dADl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~L~~~~~~~~  375 (392)
                      .+++ ++  ||+++|+|||||+||++|||+|  .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus       240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~  318 (510)
T 1ez0_A          240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS  318 (510)
T ss_dssp             HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred             Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence            9997 64  9999999999999999999999  99999999999999999999999999999 99999999999999998


Q ss_pred             cC
Q 016240          376 VG  377 (392)
Q Consensus       376 vG  377 (392)
                      +|
T Consensus       319 ~g  320 (510)
T 1ez0_A          319 PS  320 (510)
T ss_dssp             CB
T ss_pred             CC
Confidence            65

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=4.3e-61  Score=519.00  Aligned_cols=292  Identities=33%  Similarity=0.478  Sum_probs=278.6

Q ss_pred             EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHH
Q 016240           97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY  176 (392)
Q Consensus        97 v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~  176 (392)
                      ++.++.+|+++++++|++||.  .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++. .|+..+++.++|
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~  620 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY  620 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence            789999999999999999999  99999999999999999999999999999999999999999975 599999999999


Q ss_pred             HHHHHHhhcCcc--CCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240          177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH  254 (392)
Q Consensus       177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~  254 (392)
                      |+...+++.+..  .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus       621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~  700 (1001)
T 3haz_A          621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH  700 (1001)
T ss_dssp             HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence            999998876653  344456788899999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC--CCccEEEecCCCCcEEEcCCCCHHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA  332 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~--~~~~v~lelgG~~~~iV~~dADl~~a~  332 (392)
                      ++|+|+|+||+|+|++.. +..|+.||+||+|+||||+++|+.|++.++++  +++|+++|+|||||+||++|||+|.|+
T Consensus       701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa  779 (1001)
T 3haz_A          701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA  779 (1001)
T ss_dssp             HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred             HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence            999999999999997777 99999999999999999999999999999863  489999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||||++
T Consensus       780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~  839 (1001)
T 3haz_A          780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDV  839 (1001)
T ss_dssp             HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCH
T ss_pred             HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999973

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1e-60  Score=483.44  Aligned_cols=287  Identities=26%  Similarity=0.346  Sum_probs=261.1

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHH
Q 016240           99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA  178 (392)
Q Consensus        99 ~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  178 (392)
                      ..+.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..++..+++++
T Consensus        14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   91 (469)
T 3sza_A           14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI   91 (469)
T ss_dssp             ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467799999999999999  99999999999999999999999999999999999999999987679999999999888


Q ss_pred             HHHHhhcCccC----CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH
Q 016240          179 GWADKIQGLTA----PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH  254 (392)
Q Consensus       179 ~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~  254 (392)
                      ...........    ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~  171 (469)
T 3sza_A           92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP  171 (469)
T ss_dssp             HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence            76655432211    11224567899999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHH
Q 016240          255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL  334 (392)
Q Consensus       255 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~  334 (392)
                      ++ +|+|++|+|+|+ .+.+..|+.| +||+|+||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.
T Consensus       172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~  247 (469)
T 3sza_A          172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR  247 (469)
T ss_dssp             HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred             Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence            98 999999999994 4455677777 89999999999999999999997 89999999999999999999999999999


Q ss_pred             HHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCCC
Q 016240          335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ  392 (392)
Q Consensus       335 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~  392 (392)
                      +++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||||++
T Consensus       248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~  304 (469)
T 3sza_A          248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA  304 (469)
T ss_dssp             HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred             HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence            9999999999999999999999999999999999999998 69999999999999973

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=6.8e-57  Score=455.56  Aligned_cols=287  Identities=17%  Similarity=0.227  Sum_probs=248.8

Q ss_pred             EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHH
Q 016240           96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR  175 (392)
Q Consensus        96 ~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~  175 (392)
                      +++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++...+...+++.+.
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~   82 (464)
T 3k9d_A            5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY   82 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence            3456678999999999999999  99999999999999999999999999999999999999988765444444444443


Q ss_pred             HHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHH----
Q 016240          176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK----  251 (392)
Q Consensus       176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~----  251 (392)
                      ++....+ ..+. .+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++    
T Consensus        83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~  160 (464)
T 3k9d_A           83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE  160 (464)
T ss_dssp             HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence            3332211 1111 122345677889999999999999999999999999999999999999999999999998665    


Q ss_pred             HHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecC-CCCcEEEcCCCCHHH
Q 016240          252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK  330 (392)
Q Consensus       252 ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelg-G~~~~iV~~dADl~~  330 (392)
                      ++.++|+|+|+||+|++++.+.++.|+.||+||+|+||||+.+    ++.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus       161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~  234 (464)
T 3k9d_A          161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR  234 (464)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred             HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence            4688999999999999987889999999999999999999985    445554 88999 7888 999999999999999


Q ss_pred             HHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHH-------hcCccCCCC-CCCCccccCCCC
Q 016240          331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQVNQ  392 (392)
Q Consensus       331 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~-------~~~~vG~p~-~~~~~~Gpli~~  392 (392)
                      |++.+++++|+|+||.|+++++||||+++||+|+++|+++.       +.+++|+|. ++++++||+++.
T Consensus       235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~  304 (464)
T 3k9d_A          235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVG  304 (464)
T ss_dssp             HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTT
T ss_pred             HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCH
Confidence            99999999999999999999999999999999999999985       567899998 789999999863

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-56  Score=449.99  Aligned_cols=277  Identities=19%  Similarity=0.167  Sum_probs=228.4

Q ss_pred             eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc-------C
Q 016240           84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G  156 (392)
Q Consensus        84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G  156 (392)
                      -++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+       |
T Consensus        10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G   87 (463)
T 2h5g_A           10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA   87 (463)
T ss_dssp             -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred             CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence            4789999999999999999999999999999999  999999999999999999999999999999999999       7


Q ss_pred             CChh----hhhhhchhHHHHHHHHHHHHHHhhcCccCCCC---CCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHh
Q 016240          157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA  229 (392)
Q Consensus       157 k~~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALa  229 (392)
                      ||+.    ++. .|+..+++.++|++.++++..+...+..   .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus        88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa  164 (463)
T 2h5g_A           88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA  164 (463)
T ss_dssp             HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred             CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence            9987    344 6999999999999988877766543321   3445688999999999999887 77766 89999999


Q ss_pred             cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhC
Q 016240          230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS  305 (392)
Q Consensus       230 aGN~VIlKps~~~p~t~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~  305 (392)
                      +||+||+|||+.+|+++..|++++.++    | |+|+||+|+| +.++++.|..||+||+|+||||+.+|+.|++.++  
T Consensus       165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--  240 (463)
T 2h5g_A          165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--  240 (463)
T ss_dssp             HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred             cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence            999999999999999999999999999    9 9999999999 6678999999999999999999999999999886  


Q ss_pred             CCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchH-HHHHHHHHHH
Q 016240          306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD-QFVEKANALA  371 (392)
Q Consensus       306 ~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~-~f~~~L~~~~  371 (392)
                       +||+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+++++.+.+
T Consensus       241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~  305 (463)
T 2h5g_A          241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML  305 (463)
T ss_dssp             -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred             -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence             799999999999999999999999999999999999 999999999999999997 3556665554

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.3e-54  Score=437.56  Aligned_cols=264  Identities=19%  Similarity=0.252  Sum_probs=230.0

Q ss_pred             EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHH-H
Q 016240           97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R  175 (392)
Q Consensus        97 v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~  175 (392)
                      ++.++.+|++++++.|++||+  .|+.++.++|.++|+++++.++++.++|++++++|+|||..++...|+..+.+.+ +
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~   78 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN   78 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            356789999999999999999  9999999999999999999999999999999999999999987655776677766 3


Q ss_pred             HHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016240          176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH-  254 (392)
Q Consensus       176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~-  254 (392)
                      ++..  .+..+ .++.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. 
T Consensus        79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~  155 (452)
T 3my7_A           79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD  155 (452)
T ss_dssp             HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence            3332  11111 1222334567889999999999999999999999999999999999999999999999999888875 


Q ss_pred             ---HcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHH
Q 016240          255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA  331 (392)
Q Consensus       255 ---~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a  331 (392)
                         ++|+|+|+||+|++++.+.++.|+.||+|++|.||||+.+++    .++. ++||+++|+|||+|+||++|||+|.|
T Consensus       156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A  230 (452)
T 3my7_A          156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA  230 (452)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred             HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence               789999999999998888999999999999999999998654    4444 78999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHH
Q 016240          332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL  370 (392)
Q Consensus       332 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~  370 (392)
                      ++.+++++|+|+||.|+++++||||+++||+|+++|+++
T Consensus       231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~  269 (452)
T 3my7_A          231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH  269 (452)
T ss_dssp             HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999875

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=5.5e-54  Score=431.82  Aligned_cols=269  Identities=20%  Similarity=0.221  Sum_probs=232.9

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhh-------hchhHH
Q 016240          102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT  170 (392)
Q Consensus       102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~  170 (392)
                      .+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+||+..    ++..       .|+..+
T Consensus        25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~  102 (444)
T 4ghk_A           25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM  102 (444)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence            5789999999999999  99999999999999999999999999999999999999853    4432       378889


Q ss_pred             HHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHH
Q 016240          171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL  247 (392)
Q Consensus       171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~  247 (392)
                      ++.+++++.+.+.. +...+.   ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus       103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  179 (444)
T 4ghk_A          103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT  179 (444)
T ss_dssp             HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            99999999876542 333321   23567889999999999999998 8 688999999999999999999999999999


Q ss_pred             HHHHHH----HHcCCCCCeEEEEeCCch-hHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240          248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV  322 (392)
Q Consensus       248 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV  322 (392)
                      .+++++    .++|+|+|+||+|+|.+. ..++.|..||+||+|+||||+.+|+.|++.+    +||+++|+|||||+||
T Consensus       180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV  255 (444)
T 4ghk_A          180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV  255 (444)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence            999997    799999999999998554 5788888999999999999999999998775    5899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc---CCCC
Q 016240          323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPF  380 (392)
Q Consensus       323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v---G~p~  380 (392)
                      ++|||+|.|++.+++++|+|+| .|++++|||||+++||+|+++|+++++++++   |||.
T Consensus       256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~  315 (444)
T 4ghk_A          256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD  315 (444)
T ss_dssp             CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred             CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence            9999999999999999999999 9999999999999999999999999999998   8764

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=3.6e-54  Score=435.14  Aligned_cols=266  Identities=18%  Similarity=0.207  Sum_probs=240.1

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhhhhchhH-HHHHHHHHH
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA  178 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a  178 (392)
                      .+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||.    .++...|+.. ++..+++++
T Consensus        15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a   92 (468)
T 1vlu_A           15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML   92 (468)
T ss_dssp             HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred             hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence            48899999999999  9999999999999999999999999999999999999998    7765569999 999999999


Q ss_pred             HHHHhhc------CccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHH
Q 016240          179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV  249 (392)
Q Consensus       179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l  249 (392)
                      ...+.+.      +...+.   +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus        93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  170 (468)
T 1vlu_A           93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM  170 (468)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence            8887765      333221   12445688999999999999999 9 99999999999999999999999999999999


Q ss_pred             HHHHH----H----cCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       250 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      ++++.    +    +|+|+|+||+|+ ++.++++.|..||+||+|+||||+.+|+.|++.+    +||+++|+|||||+|
T Consensus       171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i  245 (468)
T 1vlu_A          171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY  245 (468)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred             HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence            99995    8    999999999999 6667889999999999999999999999998876    589999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc---CCCC
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPF  380 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v---G~p~  380 (392)
                      |++|||+|.|++.+++++|+|+| .|++++|||||+++ |+|+++|+++++++++   |||.
T Consensus       246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~  305 (468)
T 1vlu_A          246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKD  305 (468)
T ss_dssp             ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHH
T ss_pred             ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHH
Confidence            99999999999999999999999 99999999999999 9999999999999998   8874

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=2.8e-53  Score=424.68  Aligned_cols=265  Identities=20%  Similarity=0.207  Sum_probs=239.5

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhh-------hhchhHH
Q 016240          102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT  170 (392)
Q Consensus       102 ~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-------~~ev~~~  170 (392)
                      .+++++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+||+.    .++.       ..|+..+
T Consensus        13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~   90 (427)
T 1o20_A           13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM   90 (427)
T ss_dssp             -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence            5689999999999999  9999999999999999999999999999999999999885    4443       2589999


Q ss_pred             HHHHHHHHHHHHhhcCccCCC---CCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHH
Q 016240          171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL  247 (392)
Q Consensus       171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~  247 (392)
                      ++.+++|+.+.+. .+...+.   ..+...++.++|+|||++|+|||  +...++++++||++||+||+|||+.+|+++.
T Consensus        91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~  167 (427)
T 1o20_A           91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK  167 (427)
T ss_dssp             HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred             HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence            9999999987765 3433321   22455688999999999999875  4788999999999999999999999999999


Q ss_pred             HHHHHHH----HcCCCCCeEEEEeCC-chhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEE
Q 016240          248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV  322 (392)
Q Consensus       248 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV  322 (392)
                      .|++++.    ++|+|+|++|+|+|. .+..++.|..||+||+|+||||+.+|+.|++.+    +||+++|+|||||+||
T Consensus       168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV  243 (427)
T 1o20_A          168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV  243 (427)
T ss_dssp             HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred             HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence            9999998    689999999999984 456788999999999999999999999999886    4899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCcc
Q 016240          323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV  376 (392)
Q Consensus       323 ~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~v  376 (392)
                      ++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++
T Consensus       244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  296 (427)
T 1o20_A          244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV  296 (427)
T ss_dssp             CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999 9999999999999999999999999999876

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=84.09  E-value=32  Score=33.28  Aligned_cols=165  Identities=16%  Similarity=0.117  Sum_probs=93.6

Q ss_pred             CCCeeEEEecccceEEEEcCC---cccHHHHHHHHHHHHhcCCE-EEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 016240          193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG  268 (392)
Q Consensus       193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~ALaaGN~-VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g  268 (392)
                      .|......+.|+--|++..|.   .||- +++..++||-.+|+. +|+..++..-...-.+.-..+.+|+.    .+..-
T Consensus       119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~----eIy~v  193 (423)
T 4gic_A          119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVD----RVFRI  193 (423)
T ss_dssp             TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCC----EEECC
T ss_pred             CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCc----EEEEc
Confidence            466677889999999999995   3554 345568999999996 44443332111222233334455664    23332


Q ss_pred             CchhHHHHHHc----CCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCc--EEEcCCCCHHHHHHHHHHHHHhc
Q 016240          269 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP--FIVCEDADVDKAAELAHYALFFN  342 (392)
Q Consensus       269 ~~~~~~~~l~~----~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~--~iV~~dADl~~a~~~i~~~~~~~  342 (392)
                      .|...-.+|.-    -|.||+|+=.|..=+...=.+..   +..-+=+. .|-+=  +|-++++|.+..+..++--+=+.
T Consensus       194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEHd  269 (423)
T 4gic_A          194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEHD  269 (423)
T ss_dssp             CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred             CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence            24444444432    57899999999886654221111   21112122 23333  33345699999988877655444


Q ss_pred             cCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          343 QGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       343 ~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      ..     .+.++|..+  ++|.+++.+++.+
T Consensus       270 ~~-----a~~iLvT~s--~~la~~V~~~i~~  293 (423)
T 4gic_A          270 ED-----AQAILISPD--AAHLEAVQASIER  293 (423)
T ss_dssp             TT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred             CC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence            33     455777665  4555555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	392
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-122
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-121
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-97
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	3e-89
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-73
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-56
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	2e-55
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-53
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-34
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-33
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-15

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  360 bits (926), Expect = e-122
 Identities = 182/338 (53%), Positives = 240/338 (71%), Gaps = 2/338 (0%)

Query: 56  PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
           P+T   +  YT++ IN ++  S SGK FP  +P T + +  V EG+ EDV++AV AAR+A
Sbjct: 5   PLTNL-QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQA 63

Query: 116 FDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
           F  G  W  M A ER +++ + ADL+ER    +A +E  + GK F  +   ++    +  
Sbjct: 64  FQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTL 123

Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
           RY AGWADKIQG T P DG +   T  EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+
Sbjct: 124 RYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183

Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
           V+K AEQTPL+AL++  L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST  
Sbjct: 184 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243

Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
           GK++ + A KSNLK V+LELGGKSP IV  DAD+D A E AH  +F++QGQCC A SR F
Sbjct: 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 303

Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           V ES+YD+FV ++   A K V+G+P   G+ QGPQ+++
Sbjct: 304 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 341

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  357 bits (917), Expect = e-121
 Identities = 203/342 (59%), Positives = 250/342 (73%), Gaps = 2/342 (0%)

Query: 52  AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSA 111
           A   P   P +V   Q+ IN ++ D+ S KTFPT++P TG+VI  VAEG+ EDV++AV A
Sbjct: 1   AVPAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKA 59

Query: 112 ARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
           AR AF  G  W RM A  R +++ R ADL+ER    +AALET DNGKP+  S   ++ M 
Sbjct: 60  ARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119

Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
            +  RYYAGWADK  G T P DG +   T HEP+GV GQIIPWNFPLLM AWK+GPALA 
Sbjct: 120 LKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT 179

Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
           GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTG
Sbjct: 180 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 239

Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
           ST  G+++   A  SNLK VTLELGGKSP I+  DAD+D A E AH+ALFFNQGQC CAG
Sbjct: 240 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299

Query: 351 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           SRTFV E +YD+FVE++ A A  RVVG+PF    +QGPQV++
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDE 341

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  297 bits (761), Expect = 2e-97
 Identities = 121/336 (36%), Positives = 185/336 (55%), Gaps = 6/336 (1%)

Query: 58  TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF 116
           T  V V        G+ + S  G T  P  +P TG V+  +    AE+V++AV +A+ A+
Sbjct: 12  TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71

Query: 117 DEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
            +  W +M   ERS+++L  A ++    D IA LE  +N       A+ ++    +   Y
Sbjct: 72  LK--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEY 128

Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
           YAG A  + G      G     T  EP+GV   I+ WN+P ++ AWK  PALACGN +V 
Sbjct: 129 YAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVF 188

Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
           K +  TP++ + ++++ HEAG+P G++N+V G G   G+ L  H  V K++FTGS  TGK
Sbjct: 189 KPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247

Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
            V++++AK  +K VTLELGGKSP ++ +D +++ A   A  A F  QGQ C  G+R FV 
Sbjct: 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306

Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             +  QF+E+        VVGDP     + G  +++
Sbjct: 307 REIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISK 342

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  275 bits (704), Expect = 3e-89
 Identities = 125/328 (38%), Positives = 182/328 (55%), Gaps = 6/328 (1%)

Query: 66  TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
            +LLING+ V    G+  P  +P TGDV+  +AE  AE V+ AV AA  AF E  W + T
Sbjct: 3   HKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59

Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
              R++ +L+ AD++E +    A LE+ + GKP   +   E+P    +FR++AG A  + 
Sbjct: 60  PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119

Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
           GL A      H      +P+GV   I PWN+PL+M AWK+ PALA GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179

Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
           +AL +++L  +   P GV+NI+ G G T G  L  H +V  ++ TGS  TG+ ++     
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237

Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
           S++K   +ELGGK+P IV +DAD++   E      ++N GQ C A  R +  + +YD  V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297

Query: 365 EKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           EK  A       G P     + GP  + 
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSL 325

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  233 bits (594), Expect = 6e-73
 Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 12/319 (3%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
           +  +NG++  S         +P +G  +  V     E+V+   ++A+KA     W  ++ 
Sbjct: 5   KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL-----FRYYAGWA 181
            ER+  + + AD+L R  ++I A+ + +  K ++ +    V     +             
Sbjct: 61  IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120

Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
               G    A          EP+G+   I P+N+P+ +   K+ PAL  GN I  K   Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
             +S L +++   EAGLP GV N ++G G   G  +  H  V+ + FTGST  G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
           A    ++P+ LELGGK   IV EDAD++  A+      F   GQ C A  R  V ESV D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297

Query: 362 QFVEKANALAMKRVVGDPF 380
           + VEK     +   +G+P 
Sbjct: 298 ELVEKIREKVLALTIGNPE 316

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  191 bits (486), Expect = 1e-56
 Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 15/352 (4%)

Query: 49  AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNR 107
           A   A   +       Y  L I G++VD+   +   +L+P    +V+   A+    +   
Sbjct: 22  AMREALRRVREEFGRHY-PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEA 78

Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
           A+ AA KAF    W      +RS+++L+ A L+ R   E+ A   ++ GK + ++   +V
Sbjct: 79  ALEAAWKAFKT--WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADV 135

Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
                   YYA  A + +              ++ + P+G    I PWNFP+ +F   + 
Sbjct: 136 AEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195

Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
             +A GNT++ K AE   +    V ++ HEAG PPGV+N + G G   GA L  H  +  
Sbjct: 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF 255

Query: 286 LAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
           + FTGS   G  + + A +     +  K   +E GGK+  IV E AD D AAE    + +
Sbjct: 256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY 315

Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             QGQ C A SR  + +  Y+  +E+    A +  VG P +     GP V+ 
Sbjct: 316 GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSA 366

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  188 bits (477), Expect = 2e-55
 Identities = 94/331 (28%), Positives = 140/331 (42%), Gaps = 13/331 (3%)

Query: 67  QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
              + G++  S  G+      P     I  V     E+V R +    K         M  
Sbjct: 18  PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74

Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
            ER  ++ + AD++ER+ D  A +   + GKP    A  EV       R       KI G
Sbjct: 75  TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKKIGG 133

Query: 187 LTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
              P D  Y           EP+GV   I P+N+PL     K+  +   GN +V+K +  
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193

Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
            PL A    K L +AG PP  + +++  G  A   + +   V  ++FTGST  G+ V+++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252

Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
                +K   +ELGG  P IV EDAD+D AA+     ++   GQ C A         VY 
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309

Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
           + VE+         VGDP    +  GP ++ 
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISP 340

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  182 bits (461), Expect = 1e-53
 Identities = 77/292 (26%), Positives = 115/292 (39%), Gaps = 11/292 (3%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
           ++  V  AR+AF+       +   R + +     ++  +   I+     D GK    S  
Sbjct: 2   ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59

Query: 165 TEVPMTTRLFRYYA----GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
            EV                WA+              +    EP+GV   I  WN+P  + 
Sbjct: 60  EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119

Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
              +  A+A GN ++LK +E +   A  ++ L+ +          +   G          
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176

Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
              D + +TGST  GKIV+  AAK +L PVTLELGGKSP  V +D D+D A     +  F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235

Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
            N GQ C A        S+ +Q VEK          G+  K     G  +N 
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIIND 286

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  129 bits (324), Expect = 3e-34
 Identities = 47/298 (15%), Positives = 89/298 (29%), Gaps = 15/298 (5%)

Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
           +++       R+A+D       T  E++K I + A+ L+    EI      D  K  E+ 
Sbjct: 1   DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58

Query: 163 -----------AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
                          +    +      G  D +  +         ++     + +    I
Sbjct: 59  VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118

Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YG 270
            +     +       AL  GNTI+L+       S   +   + EA     +         
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178

Query: 271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 330
            T  + +   + + +         G  ++     +   PV     G     V E AD+ K
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238

Query: 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
           A  +   A        C A  +  VHE +  +F+        K  V        ++  
Sbjct: 239 AVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIV 295

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score =  128 bits (322), Expect = 2e-33
 Identities = 62/333 (18%), Positives = 113/333 (33%), Gaps = 22/333 (6%)

Query: 79  SGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
           +   F   +  TG+ +          +VN+A +AA K   +  + R+   +R+ ++   A
Sbjct: 1   TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58

Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----- 192
             LE  +D+I A    +   P  +    E+  T    R +A   +      A  D     
Sbjct: 59  SELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117

Query: 193 ----GPYHVQTLHEPIGVAGQIIPWNFPL--LMFAWKVGPALACGNTIVLKTAEQTPLS- 245
                   ++     +G        NFPL           ALA G  +++K     P + 
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177

Query: 246 ---ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
              A  + + L +  LP  +  ++ G     G AL SH E+  + FTGS   G+ +  LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237

Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAEL---AHYALFFNQGQCCCAGSRTFVHESV 359
            +           G         + +   A+L      ++    GQ C      F   + 
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297

Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQVNQ 392
             Q   +     +++           +    +Q
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQ 330

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.9 bits (183), Expect = 2e-15
 Identities = 42/294 (14%), Positives = 91/294 (30%), Gaps = 34/294 (11%)

Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
             +    ARKA +      ++   RS I+ +  D L+ +   I       N      + +
Sbjct: 5   SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58

Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQ--------------- 209
           T +   + L R      DK + +     G   V  L +P+G                   
Sbjct: 59  TGLA-DSLLKRLDLFKGDKFEVM---LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTA 114

Query: 210 -----IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPG 261
                ++ +     + A     ++  GN  +LK  +++  +   ++K++           
Sbjct: 115 PVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSET 174

Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
            + + S         ++  ++ D+            +++    +   PV     G     
Sbjct: 175 GVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIY 234

Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
           + EDAD+ KA  ++  A       C        ++      +    N      V
Sbjct: 235 LDEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENLTLEGGV 287

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	392
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.9e-74  Score=585.39  Aligned_cols=334  Identities=54%  Similarity=0.954  Sum_probs=319.6

Q ss_pred             CCCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHH
Q 016240           59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFA  137 (392)
Q Consensus        59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a  137 (392)
                      ....++++++||||+|+++.++++++++||.||++|++++.++.+|+++|+++|++||+.+ .|++++.++|.++|++++
T Consensus         7 ~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia   86 (494)
T d1bxsa_           7 TNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLA   86 (494)
T ss_dssp             SSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred             CCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence            4467888999999999998889999999999999999999999999999999999999732 599999999999999999


Q ss_pred             HHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccH
Q 016240          138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       138 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      ++|++++++|++++++|+|||..++...|+..+++.+++++.+.+++.+...+...+...++.++|+|||++|+|||||+
T Consensus        87 ~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  166 (494)
T d1bxsa_          87 DLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPL  166 (494)
T ss_dssp             HHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred             HHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchh
Confidence            99999999999999999999999877678999999999999999998888778777888899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|..||+|++|.||||+.+|+.
T Consensus       167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~  246 (494)
T d1bxsa_         167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL  246 (494)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.+++.++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g  326 (494)
T d1bxsa_         247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG  326 (494)
T ss_dssp             HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred             HHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeee
Confidence            99999876799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      +|.++++++||||++
T Consensus       327 ~~~~~~~~~gpli~~  341 (494)
T d1bxsa_         327 NPLTPGVSQGPQIDK  341 (494)
T ss_dssp             CTTSTTCCBCCCSCH
T ss_pred             ccCCCCCcCCCcCCH
Confidence            999999999999973

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.4e-73  Score=580.11  Aligned_cols=333  Identities=60%  Similarity=1.001  Sum_probs=318.0

Q ss_pred             CCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHH
Q 016240           60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFAD  138 (392)
Q Consensus        60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g-~W~~~~~~~R~~~L~~~a~  138 (392)
                      .+.++++++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+.+ .|++++.++|.++|+++++
T Consensus         8 ~p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~   87 (494)
T d1o04a_           8 QPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLAD   87 (494)
T ss_dssp             SCCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHH
T ss_pred             CCccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHH
Confidence            345778899999999998889999999999999999999999999999999999999632 5999999999999999999


Q ss_pred             HHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHH
Q 016240          139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLL  218 (392)
Q Consensus       139 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~  218 (392)
                      .|+++.++|++++++|+|||..++...|+..+++.+++++.+..++.++..+...+...++.++|+|||++|+|||||+.
T Consensus        88 ~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~  167 (494)
T d1o04a_          88 LIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL  167 (494)
T ss_dssp             HHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHH
T ss_pred             HHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHH
Confidence            99999999999999999999998877799999999999999999988888777777888999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHH
Q 016240          219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV  298 (392)
Q Consensus       219 ~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i  298 (392)
                      ..++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|+|+|++.+.++.|..||+|+.|.||||+++|+.|
T Consensus       168 ~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i  247 (494)
T d1o04a_         168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI  247 (494)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCC
Q 016240          299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD  378 (392)
Q Consensus       299 ~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~  378 (392)
                      ++.++.+++||+++|+||+||+||++|||+|.|++.+++++|+|+||.|++++++|||+++||+|+++|+++++++++|+
T Consensus       248 ~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~  327 (494)
T d1o04a_         248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN  327 (494)
T ss_dssp             HHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred             HHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecC
Confidence            99887558999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCC
Q 016240          379 PFKGGIQQGPQVNQ  392 (392)
Q Consensus       379 p~~~~~~~Gpli~~  392 (392)
                      |.++++++||||++
T Consensus       328 p~~~~~~~gpli~~  341 (494)
T d1o04a_         328 PFDSKTEQGPQVDE  341 (494)
T ss_dssp             TTSTTCSBCCCSSH
T ss_pred             cccccCccCCCCCH
Confidence            99999999999973

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=4.5e-71  Score=562.39  Aligned_cols=329  Identities=37%  Similarity=0.667  Sum_probs=313.4

Q ss_pred             CCCCCCccCceeCCEeeeCCCCCee-eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 016240           59 PPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA  137 (392)
Q Consensus        59 ~~~~~~~~~~~I~G~~~~~~~~~~~-~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a  137 (392)
                      .+..+....+||||+|+++.+|+++ +++||+||+++++++.++.+|+++|+++|++||+  .|++++..+|.++|++++
T Consensus        13 ~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a   90 (503)
T d1a4sa_          13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAA   90 (503)
T ss_dssp             TTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred             CceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHH
Confidence            4456666778999999998788766 6999999999999999999999999999999999  999999999999999999


Q ss_pred             HHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccH
Q 016240          138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       138 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      +.|++++++|++++++|+|||+.++. .|+..+++.+++++.+.++..+...+.+.+...++.++|+|||++|+|||||+
T Consensus        91 ~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~  169 (503)
T d1a4sa_          91 RIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPF  169 (503)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHH
T ss_pred             HHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChH
Confidence            99999999999999999999999976 59999999999999999888777666666778899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+.++.|..||+||+|.||||+++|+.
T Consensus       170 ~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~  248 (503)
T d1a4sa_         170 MIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKK  248 (503)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 5688999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      |++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|+++|.+.++++++|
T Consensus       249 i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g  327 (503)
T d1a4sa_         249 VMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG  327 (503)
T ss_dssp             HHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred             HHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeec
Confidence            9999987 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC
Q 016240          378 DPFKGGIQQGPQVNQ  392 (392)
Q Consensus       378 ~p~~~~~~~Gpli~~  392 (392)
                      +|.++.+++||++++
T Consensus       328 ~~~~~~~~~gp~i~~  342 (503)
T d1a4sa_         328 DPLLTETRMGGLISK  342 (503)
T ss_dssp             CTTSTTCCBCCCSCH
T ss_pred             cccccccccccccCH
Confidence            999999999999973

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-70  Score=550.96  Aligned_cols=322  Identities=38%  Similarity=0.659  Sum_probs=300.8

Q ss_pred             ccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 016240           65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN  144 (392)
Q Consensus        65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~  144 (392)
                      +.++||||+|++. +|++++++||+||++|++++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|+++.
T Consensus         2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~   78 (474)
T d1wnda_           2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG   78 (474)
T ss_dssp             CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence            3589999999975 779999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-CCCCCeeEEEecccceEEEEcCCcccHHHHHHH
Q 016240          145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK  223 (392)
Q Consensus       145 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  223 (392)
                      ++|+++++.|+|||+.++...++..+.+.++|++...........+ ...+...++.++|+|||++|+|||||+...+++
T Consensus        79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  158 (474)
T d1wnda_          79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  158 (474)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence            9999999999999999987767777778777777665544333322 234677889999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhh
Q 016240          224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA  303 (392)
Q Consensus       224 ~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa  303 (392)
                      +++||++||+||+|||+.+|+++..+++++++ ++|+|++|+|+|++.++++.|++||+|++|.||||+++|+.|++.++
T Consensus       159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~  237 (474)
T d1wnda_         159 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA  237 (474)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence            99999999999999999999999999999977 59999999999988889999999999999999999999999999999


Q ss_pred             hCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       304 ~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      + ++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus       238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~  316 (474)
T d1wnda_         238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES  316 (474)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred             c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCC
Q 016240          384 IQQGPQVN  391 (392)
Q Consensus       384 ~~~Gpli~  391 (392)
                      +++||+++
T Consensus       317 ~~~Gpli~  324 (474)
T d1wnda_         317 TELGPLSS  324 (474)
T ss_dssp             CCBCCCSC
T ss_pred             ceeccccc
Confidence            99999997

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-67  Score=539.10  Aligned_cols=322  Identities=31%  Similarity=0.494  Sum_probs=301.4

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER  142 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~  142 (392)
                      ++.++||||+|+.  +++++.++||. ||+++++++.++.+|+++|+++|++||+  .|+++|.++|.++|+++++.|++
T Consensus        36 ~~~~l~I~G~~v~--s~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~  111 (516)
T d1uzba_          36 RHYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRR  111 (516)
T ss_dssp             EEECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEcCEEEC--CCCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence            4569999999996  45688899995 7999999999999999999999999999  99999999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC--CCCCCeeEEEecccceEEEEcCCcccHHHH
Q 016240          143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF  220 (392)
Q Consensus       143 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  220 (392)
                      +.++|+++++.|+|||+.++. .|+..+++.+++++.......+....  ...+...+..++|+|||++|+|||||+...
T Consensus       112 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~  190 (516)
T d1uzba_         112 RKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF  190 (516)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred             HHHHHHHHHHHHhCCCccccc-hhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence            999999999999999999975 59999999999999988887655432  223566788899999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHH
Q 016240          221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ  300 (392)
Q Consensus       221 ~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~  300 (392)
                      ++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.+.++.|+.||+|+.|.||||+.+|+.|++
T Consensus       191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~  270 (516)
T d1uzba_         191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE  270 (516)
T ss_dssp             HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred             cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             Hhhh-----CCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCc
Q 016240          301 LAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV  375 (392)
Q Consensus       301 ~aa~-----~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~  375 (392)
                      .++.     .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|++++++++++++
T Consensus       271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~  350 (516)
T d1uzba_         271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS  350 (516)
T ss_dssp             HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred             HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence            8872     36899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccccCCC
Q 016240          376 VGDPFKGGIQQGPQVN  391 (392)
Q Consensus       376 vG~p~~~~~~~Gpli~  391 (392)
                      +| |.++++++||+|+
T Consensus       351 ~g-~~~~~~~~gpli~  365 (516)
T d1uzba_         351 VG-PAEENPDLGPVVS  365 (516)
T ss_dssp             BS-CGGGCCSBCCCSC
T ss_pred             cC-CCcccCccccccC
Confidence            99 6688999999997

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=4e-64  Score=511.28  Aligned_cols=325  Identities=28%  Similarity=0.384  Sum_probs=300.1

Q ss_pred             CCCCCCccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 016240           59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD  138 (392)
Q Consensus        59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~  138 (392)
                      ....+...++||||+|+.  +|++++++||.||+++++++.++.+|+++|+++|+++++. .|+++|.++|.++|+++++
T Consensus        10 ~~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~   86 (499)
T d1ky8a_          10 EKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAAD   86 (499)
T ss_dssp             EETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHH
Confidence            334455689999999984  6789999999999999999999999999999999887662 5999999999999999999


Q ss_pred             HHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCccCC-----CCCCCeeEEEecccceEEEEcCC
Q 016240          139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPIGVAGQIIPW  213 (392)
Q Consensus       139 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~i~p~  213 (392)
                      .|+++.++|++++++|+|||..++. .|+..+++.++|++...++..+....     ...+...+..++|+|||++|+||
T Consensus        87 ~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~  165 (499)
T d1ky8a_          87 IIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPF  165 (499)
T ss_dssp             HHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccc
Confidence            9999999999999999999999975 59999999999999988876554322     12356678899999999999999


Q ss_pred             cccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChH
Q 016240          214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT  293 (392)
Q Consensus       214 n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~  293 (392)
                      |||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+++++++.+++ +.+..|..|+.|+.+.||||+.
T Consensus       166 N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~  244 (499)
T d1ky8a_         166 NYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTE  244 (499)
T ss_dssp             SSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHH
T ss_pred             cccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccc
Confidence            999999999999999999999999999999999999999999999999999999865 4568899999999999999999


Q ss_pred             HHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhc
Q 016240          294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK  373 (392)
Q Consensus       294 ~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~  373 (392)
                      +++.+++.++   .+|+++|+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|++++++
T Consensus       245 ~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~  321 (499)
T d1ky8a_         245 VGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSS  321 (499)
T ss_dssp             HHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHT
T ss_pred             cceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHh
Confidence            9999988764   4899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCccccCCC
Q 016240          374 RVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       374 ~~vG~p~~~~~~~Gpli~  391 (392)
                      +++|+|.|+++++|||++
T Consensus       322 l~~G~p~~~~~~~gpli~  339 (499)
T d1ky8a_         322 LRVGDPRDPTVDVGPLIS  339 (499)
T ss_dssp             CCBSCTTSTTCSBCCCSC
T ss_pred             CccCCCCCccccccccch
Confidence            999999999999999997

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1.2e-61  Score=490.31  Aligned_cols=319  Identities=30%  Similarity=0.487  Sum_probs=293.8

Q ss_pred             CccCceeCCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 016240           64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH  143 (392)
Q Consensus        64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~  143 (392)
                      +..++||||+|+.  ++++++++||.||+++++++.++.+|+++|+++|++|++  .|++++.++|.++|+++++.|+++
T Consensus         2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~   77 (474)
T d1euha_           2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD   77 (474)
T ss_dssp             CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence            4569999999985  567999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhhcCcc-----C-CCCCCCeeEEEecccceEEEEcCCcccH
Q 016240          144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----A-PADGPYHVQTLHEPIGVAGQIIPWNFPL  217 (392)
Q Consensus       144 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-----~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~  217 (392)
                      .++|++++++|+|||..++. .|+...+..++++...........     . ....+...++.++|+|||++|+|||||+
T Consensus        78 ~~~la~~~~~e~Gk~~~~a~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~  156 (474)
T d1euha_          78 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV  156 (474)
T ss_dssp             HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             HHHHHHHHHHHhCCCcchhc-cccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence            99999999999999999875 599999999999887765543221     1 1223556688899999999999999999


Q ss_pred             HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHH
Q 016240          218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI  297 (392)
Q Consensus       218 ~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~  297 (392)
                      ...++++++||++||+||+||++.+|.++.+++++|.++|+|+|++|+|++++.++++.|..||+|+.|.||||+++++.
T Consensus       157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~  236 (474)
T d1euha_         157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER  236 (474)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence            99999999999999999999999999999999999999999999999999987889999999999999999999999999


Q ss_pred             HHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccC
Q 016240          298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG  377 (392)
Q Consensus       298 i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG  377 (392)
                      +.+.++   .+|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||+++|++|++.++++...++.|
T Consensus       237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~  313 (474)
T d1euha_         237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  313 (474)
T ss_dssp             HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence            998864   58999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCC
Q 016240          378 DPFKGGIQQGPQVN  391 (392)
Q Consensus       378 ~p~~~~~~~Gpli~  391 (392)
                      +|.+.. .++|++.
T Consensus       314 ~~~~~~-~~~~~~~  326 (474)
T d1euha_         314 NPEDDA-DITPLID  326 (474)
T ss_dssp             CGGGTC-SBCCCSC
T ss_pred             Cccccc-ccccccc
Confidence            998865 4677653

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=9.5e-59  Score=471.46  Aligned_cols=303  Identities=23%  Similarity=0.326  Sum_probs=265.2

Q ss_pred             CCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 016240           79 SGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK  157 (392)
Q Consensus        79 ~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  157 (392)
                      ++++|+++||+|||.|+ .++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|++++++|++++++|+||
T Consensus         1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk   78 (504)
T d1ez0a_           1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL   78 (504)
T ss_dssp             CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred             CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35789999999999997 7999999999999999999999  99999999999999999999999999999999999999


Q ss_pred             ChhhhhhhchhHHHHHHHHHHHHHHhhcCccC------C---CCCCCeeEEEecccceEEEEcCCcccHHHH--HHHHHH
Q 016240          158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA------P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGP  226 (392)
Q Consensus       158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~------~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~~~  226 (392)
                      |+.++. +|+..+++.++||+++.++......      +   ...+...+..++|+|||++|+|||||+...  .+++++
T Consensus        79 p~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~  157 (504)
T d1ez0a_          79 PEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS  157 (504)
T ss_dssp             CHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred             CHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHH
Confidence            999975 6999999999999998877543321      1   112345678889999999999999998654  469999


Q ss_pred             HHhcCCEEEEecCCCChHHHHHHHHH----HHHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHh
Q 016240          227 ALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA  302 (392)
Q Consensus       227 ALaaGN~VIlKps~~~p~t~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~a  302 (392)
                      ||++||+||+|||+.+|.++.++.++    |.++|+|+|++|+|+|++.++++.|..||+|++|.||||+.+|+.|++.+
T Consensus       158 ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~a  237 (504)
T d1ez0a_         158 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA  237 (504)
T ss_dssp             HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhh
Confidence            99999999999999999998776554    56779999999999998888999999999999999999999999999999


Q ss_pred             hhCCCcc--EEEecCCCCcEEEcCCCCHHHHH--HHHHHHHHhccCCcccCCcEEEEeCcchH-HHHHHHHHHHhcCccC
Q 016240          303 AKSNLKP--VTLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVYD-QFVEKANALAMKRVVG  377 (392)
Q Consensus       303 a~~~~~~--v~lelgG~~~~iV~~dADl~~a~--~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~-~f~~~L~~~~~~~~vG  377 (392)
                      +. +++|  +++|+|||||+||++|||++.|+  +.++.++|+|+||.|++++|+||+++.++ .|++.+++.++.   +
T Consensus       238 a~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~  313 (504)
T d1ez0a_         238 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q  313 (504)
T ss_dssp             HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C
T ss_pred             hc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c
Confidence            87 6665  56699999999999999999875  47899999999999999999998877544 566666655543   3


Q ss_pred             CCCCCCCccccCCC
Q 016240          378 DPFKGGIQQGPQVN  391 (392)
Q Consensus       378 ~p~~~~~~~Gpli~  391 (392)
                         ++++.+||+|+
T Consensus       314 ---~~~~~~gp~i~  324 (504)
T d1ez0a_         314 ---SPSTLLTPGIR  324 (504)
T ss_dssp             ---CCBCCSSHHHH
T ss_pred             ---ccccccccchh
Confidence               44788999875

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-55  Score=440.06  Aligned_cols=280  Identities=28%  Similarity=0.341  Sum_probs=256.8

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhhchhHHHHHHHHHHHHHHhh
Q 016240          105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI  184 (392)
Q Consensus       105 v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~  184 (392)
                      |++|++.|++||+  .|+.+|.++|.++|+++++.|++|+++|++++++|+|||..++..+|+..+++.+++++.....+
T Consensus         2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~   79 (446)
T d1ad3a_           2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW   79 (446)
T ss_dssp             HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7899999999999  99999999999999999999999999999999999999999987789999999999998876665


Q ss_pred             cCccC----CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 016240          185 QGLTA----PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP  260 (392)
Q Consensus       185 ~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~ll~~aGlP~  260 (392)
                      .....    ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+ ++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~  158 (446)
T d1ad3a_          80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQ  158 (446)
T ss_dssp             HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCT
T ss_pred             hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccc
Confidence            43321    122355678899999999999999999999999999999999999999999999999999999877 5999


Q ss_pred             CeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEEEcCCCCHHHHHHHHHHHHH
Q 016240          261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF  340 (392)
Q Consensus       261 g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~iV~~dADl~~a~~~i~~~~~  340 (392)
                      ++++++.+.+... ..+. ++.+|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|
T Consensus       159 ~~~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~  235 (446)
T d1ad3a_         159 NLYLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF  235 (446)
T ss_dssp             TTEEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred             cccccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence            9999999855443 4444 5689999999999999999999987 89999999999999999999999999999999999


Q ss_pred             hccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCCCccccCCC
Q 016240          341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQVN  391 (392)
Q Consensus       341 ~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~  391 (392)
                      .|+||.|++++|||||+++||+|+++|.+.++.+ +|+|.++++++||+++
T Consensus       236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~  285 (446)
T d1ad3a_         236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIIN  285 (446)
T ss_dssp             TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSC
T ss_pred             cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhh
Confidence            9999999999999999999999999999999887 8999999999999997

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-44  Score=359.05  Aligned_cols=274  Identities=18%  Similarity=0.143  Sum_probs=224.5

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhhh-----------chhHHH
Q 016240          103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT-----------EVPMTT  171 (392)
Q Consensus       103 ~~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~-----------ev~~~~  171 (392)
                      +|+.+++++|++||+  .|+++|..+|.++|++++++|++|+++|++++++|+||+..++...           ++..++
T Consensus         1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~   78 (414)
T d1o20a_           1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI   78 (414)
T ss_dssp             CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHH
Confidence            478999999999999  9999999999999999999999999999999999999998775331           255677


Q ss_pred             HHHHHHHHHHHhhcCccCCCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHH
Q 016240          172 RLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK  251 (392)
Q Consensus       172 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l~~  251 (392)
                      +.+++++...+...+...+..........++|.|+++++.|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~  158 (414)
T d1o20a_          79 KACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVS  158 (414)
T ss_dssp             HHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHH
T ss_pred             HHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhh
Confidence            77787777655555444443334456778889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHc----CCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCC-cEEEcCCC
Q 016240          252 LLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCEDA  326 (392)
Q Consensus       252 ll~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~-~~iV~~dA  326 (392)
                      ++.++    |+|.++++.+.+.+......+..+   +.+.|+||+..+..+.+.+++ +.+++++|+||+| ++||++||
T Consensus       159 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~dA  234 (414)
T d1o20a_         159 AIREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDESA  234 (414)
T ss_dssp             HHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTTS
T ss_pred             HHHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeeccccc
Confidence            98877    555566777776555555555543   334444444455566666666 5677778887755 57888999


Q ss_pred             CHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHHhcCccCCCCCCC
Q 016240          327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG  383 (392)
Q Consensus       327 Dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~~~~~vG~p~~~~  383 (392)
                      |+|.|++.++.+.|.| ||.|++++|+|||+++||+|+++|.+...+..++++.++.
T Consensus       235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~  290 (414)
T d1o20a_         235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK  290 (414)
T ss_dssp             CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred             chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchh
Confidence            9999999999999877 9999999999999999999999999999998887765543

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.3e-37  Score=304.06  Aligned_cols=258  Identities=18%  Similarity=0.183  Sum_probs=201.3

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------hcCCChhhhh------hhchhHHH
Q 016240          104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSA------QTEVPMTT  171 (392)
Q Consensus       104 ~v~~av~~A~~a~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a~------~~ev~~~~  171 (392)
                      .++++++.|++|++  .|+.++.++|.++|+++++.|++|.++|+++..+      +.|++...-.      ...+...+
T Consensus         4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence            46788999999999  9999999999999999999999999999886544      4455422110      01133444


Q ss_pred             HHHHHHHHHHHhhcCccC--CCCCCCeeEEEecccceEEEEcCCcccHHHHHHHHHHHHhcCCEEEEecCCCChHHHHHH
Q 016240          172 RLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV  249 (392)
Q Consensus       172 ~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~t~~~l  249 (392)
                      +.++..+...+.......  ..+.+...+..++|+||+++| |+++| ..++++.++||++||+||+||++.++.++..+
T Consensus        82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l  159 (436)
T d1vlua_          82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM  159 (436)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence            555555443332211111  123466778889999999988 66777 66678899999999999999999999999888


Q ss_pred             HHHH--------HHcCCCCCeEEEEeCCchhHHHHHHcCCCcCEEEeeCChHHHHHHHHHhhhCCCccEEEecCCCCcEE
Q 016240          250 SKLL--------HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI  321 (392)
Q Consensus       250 ~~ll--------~~aGlP~g~v~vv~g~~~~~~~~l~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~v~lelgG~~~~i  321 (392)
                      ++++        .++|+|+|+++++++ +.+.++.|..|++||.|+||||...++.+.+.+    .+|++.++||++|+|
T Consensus       160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~~  234 (436)
T d1vlua_         160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY  234 (436)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred             HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCcccee
Confidence            7776        466999999999987 456788999999999999999999888775553    359999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHHhccCCcccCCcEEEEeCcchHHHHHHHHHHH
Q 016240          322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA  371 (392)
Q Consensus       322 V~~dADl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~L~~~~  371 (392)
                      |++|||+|+|++.++.++|+++|| |++.++++||+++++.|...+....
T Consensus       235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~  283 (436)
T d1vlua_         235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTL  283 (436)
T ss_dssp             ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHH
T ss_pred             ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHH
Confidence            999999999999999999999996 8899999999999988866554443