Citrus Sinensis ID: 016243

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPSAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
cccEEEcccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccccccEEEcccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccEEEccccccccccccccccccccccccccccHHHHHHcccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccEEEEEEccccccccEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccc
ccEEEEccccccccccccccccEEEEEEccEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccHHHHHHHHHHHHHHccccHccEEEEEcccccccccccHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccEEEEEccccccccEEcHHHHHHHHcccccccEEEEEEEccccccEEcccEEEEEccccEEEcccccccccccccccccEEEEEEccccccccccHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccHEEEEccccccccccccccEEEcccccEccccccHHHHHHHHHHHHHHHHccHcccc
mlmlvdcskcrttlqlppgaqSIRCAICQAIthiadprsgppppsssssssyqpghvppsavapspynhappgqpphaqgrkRALIVGVSYrhtnhelkgcINDARCMKYMLTnrfkfpessivmlteedpdplkrptkyNMRMALYWLIqgcqpgdsllfhfsghgsqqrnyngeevdgydetlcpvdfetqgmivddeinttlvrplprgaRLHAIIDAchsgtvldlpflcrmdrqgkyiwedhrprsgmwkgtsggeaisfsgcddnqtsadtsALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRstirntdsgselsgagGLVTSLVTMLLtggslsggfRQVFMFVMFANCygyglsssLFDRFVSRLLLGFLIdglahtcl
MLMLVDCSKCRttlqlppgaQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPSAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRhtnhelkgcinDARCMKYMLTNRFkfpessivmlteedpdplkrPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKyiwedhrprsgMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADprsgppppsssssssYQPGHVPPSAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAgglvtslvtmlltggslsggFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
***LVDCSKCRTTLQLPPGAQSIRCAICQAITHI*************************************************ALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLT**********TKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHR*****W*****************************TSTGAMTYSFIQAIERGHGATYGS********************AGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHT**
*LMLVDCSKCRTTLQLPPGAQSIRCAICQA*************************************************GRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNS************************VTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIAD************************AVAPSPYNH************KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIR*********GAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPR******************************HAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDH**RSG****TSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
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MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPSAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFANCYGYGLSSSLFDRFVSRLLLGFLIDGLAHTCL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query392 2.2.26 [Sep-21-2011]
Q7XJE6367 Metacaspase-1 OS=Arabidop yes no 0.852 0.910 0.705 1e-137
Q7XJE5418 Metacaspase-2 OS=Arabidop no no 0.834 0.782 0.597 1e-121
Q9FMG1362 Metacaspase-3 OS=Arabidop no no 0.627 0.679 0.550 3e-76
Q75B43452 Metacaspase-1 OS=Ashbya g yes no 0.602 0.522 0.4 2e-52
Q7S4N5441 Metacaspase-1B OS=Neurosp N/A no 0.602 0.535 0.378 2e-49
Q4PEQ5402 Metacaspase-1 OS=Ustilago N/A no 0.691 0.674 0.357 3e-49
O74477425 Metacaspase-1 OS=Schizosa yes no 0.737 0.68 0.339 5e-49
A5D9W7410 Metacaspase-1 OS=Meyerozy N/A no 0.602 0.575 0.376 8e-48
A6SDT7431 Metacaspase-1 OS=Botryoti N/A no 0.599 0.545 0.361 1e-47
A7F075432 Metacaspase-1 OS=Scleroti N/A no 0.599 0.543 0.361 1e-47
>sp|Q7XJE6|MCA1_ARATH Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1 SV=1 Back     alignment and function desciption
 Score =  488 bits (1255), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/350 (70%), Positives = 288/350 (82%), Gaps = 16/350 (4%)

Query: 3   MLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPSAV 62
           MLV+CS CRT LQLP GA+SIRCA+CQA+THIADPR+ PPP  SS+ S            
Sbjct: 14  MLVNCSGCRTPLQLPSGARSIRCALCQAVTHIADPRTAPPPQPSSAPSPPP--------- 64

Query: 63  APSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESS 122
                 HAPPGQ PH  GRKRA+I G+SYR + HELKGCINDA+CM+++L N+FKF   S
Sbjct: 65  ----QIHAPPGQLPHPHGRKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDS 120

Query: 123 IVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYD 182
           I+MLTEE+ DP + PTK NMRMALYWL+QGC  GDSL+FH+SGHGS+QRNYNG+EVDGYD
Sbjct: 121 ILMLTEEETDPYRIPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYD 180

Query: 183 ETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKY 242
           ETLCP+DFETQGMIVDDEIN T+VRPLP G +LH+IIDACHSGTVLDLPFLCRM+R G+Y
Sbjct: 181 ETLCPLDFETQGMIVDDEINATIVRPLPHGVKLHSIIDACHSGTVLDLPFLCRMNRAGQY 240

Query: 243 IWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIER-GH 301
           +WEDHRPRSG+WKGT+GGEAIS SGCDD+QTSADTSALSKITSTGAMT+ FIQAIER   
Sbjct: 241 VWEDHRPRSGLWKGTAGGEAISISGCDDDQTSADTSALSKITSTGAMTFCFIQAIERSAQ 300

Query: 302 GATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQ 351
           G TYGS+LNSMR+TIRNT +    SG   +VT++++MLLTGGS  GG RQ
Sbjct: 301 GTTYGSLLNSMRTTIRNTGNDGGGSGG--VVTTVLSMLLTGGSAIGGLRQ 348
Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates. Acts as a positive regulator of cell death. Required for both oxidative stress cell death response and hypersensitive cell death response mediated by immune response.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q7XJE5|MCA2_ARATH Metacaspase-2 OS=Arabidopsis thaliana GN=AMC2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FMG1|MCA3_ARATH Metacaspase-3 OS=Arabidopsis thaliana GN=AMC3 PE=2 SV=1 Back     alignment and function description
>sp|Q75B43|MCA1_ASHGO Metacaspase-1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MCA1 PE=3 SV=1 Back     alignment and function description
>sp|Q7S4N5|MCA1B_NEUCR Metacaspase-1B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mca-2 PE=3 SV=1 Back     alignment and function description
>sp|Q4PEQ5|MCA1_USTMA Metacaspase-1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MCA1 PE=3 SV=1 Back     alignment and function description
>sp|O74477|MCA1_SCHPO Metacaspase-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pca1 PE=2 SV=1 Back     alignment and function description
>sp|A5D9W7|MCA1_PICGU Metacaspase-1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=MCA1 PE=3 SV=2 Back     alignment and function description
>sp|A6SDT7|MCA1_BOTFB Metacaspase-1 OS=Botryotinia fuckeliana (strain B05.10) GN=casA PE=3 SV=1 Back     alignment and function description
>sp|A7F075|MCA1_SCLS1 Metacaspase-1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=casA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
255539965367 caspase, putative [Ricinus communis] gi| 0.880 0.940 0.764 1e-156
225454952362 PREDICTED: metacaspase-1 [Vitis vinifera 0.875 0.947 0.737 1e-150
224114627372 predicted protein [Populus trichocarpa] 0.885 0.932 0.728 1e-149
224122278368 predicted protein [Populus trichocarpa] 0.880 0.937 0.722 1e-146
225453303370 PREDICTED: metacaspase-1-like [Vitis vin 0.880 0.932 0.722 1e-145
297734653411 unnamed protein product [Vitis vinifera] 0.872 0.832 0.720 1e-144
224114623349 predicted protein [Populus trichocarpa] 0.821 0.922 0.754 1e-144
449487560367 PREDICTED: metacaspase-1-like [Cucumis s 0.867 0.926 0.716 1e-142
224137094362 predicted protein [Populus trichocarpa] 0.788 0.853 0.737 1e-142
118486435366 unknown [Populus trichocarpa] 0.788 0.844 0.737 1e-141
>gi|255539965|ref|XP_002511047.1| caspase, putative [Ricinus communis] gi|223550162|gb|EEF51649.1| caspase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/356 (76%), Positives = 309/356 (86%), Gaps = 11/356 (3%)

Query: 1   MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPS 60
           M MLVDCS CRT LQLPPGA+SIRCAIC AIT +ADPRSGPPPP  SSS  +   H PP 
Sbjct: 1   MYMLVDCSNCRTPLQLPPGAKSIRCAICHAITLVADPRSGPPPPHHSSSGQH---HYPPP 57

Query: 61  ----AVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRF 116
               A++PSPYNHAP   PP + G KRA+I G+SY++T +ELKGCINDA+CMKY+L N+F
Sbjct: 58  LRSPAISPSPYNHAPSPPPPASHGAKRAVICGISYKNTRNELKGCINDAKCMKYLLVNKF 117

Query: 117 KFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGE 176
           KFPESSI+MLTEE+ DP +RPTK NMRMALYWL+QGC+PGDSL+FHFSGHGSQQRNY+G+
Sbjct: 118 KFPESSILMLTEEETDPYRRPTKNNMRMALYWLVQGCRPGDSLVFHFSGHGSQQRNYSGD 177

Query: 177 EVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRM 236
           EVDGYDETLCP DFETQGMIVDDEIN T+VRPLPRG +LHAIIDACHSGTVLDLP+LCRM
Sbjct: 178 EVDGYDETLCPTDFETQGMIVDDEINATIVRPLPRGVKLHAIIDACHSGTVLDLPYLCRM 237

Query: 237 DRQGKYIWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQA 296
           DR G+Y WEDHRPR+G+ KGT+GGEAISFSGCDDNQTSADTSALS++TSTGAMTYSFIQA
Sbjct: 238 DRNGRYGWEDHRPRTGVSKGTNGGEAISFSGCDDNQTSADTSALSRVTSTGAMTYSFIQA 297

Query: 297 IERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQV 352
           IERGH  TYG+MLN+MRSTI+N D   +    GG+VTSL+TMLLTGGSLSGG RQV
Sbjct: 298 IERGHATTYGNMLNAMRSTIKNVDPAVD----GGIVTSLLTMLLTGGSLSGGLRQV 349

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225454952|ref|XP_002280421.1| PREDICTED: metacaspase-1 [Vitis vinifera] gi|297744960|emb|CBI38552.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224114627|ref|XP_002332327.1| predicted protein [Populus trichocarpa] gi|222832574|gb|EEE71051.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224122278|ref|XP_002318795.1| predicted protein [Populus trichocarpa] gi|222859468|gb|EEE97015.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225453303|ref|XP_002268524.1| PREDICTED: metacaspase-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297734653|emb|CBI16704.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224114623|ref|XP_002332326.1| predicted protein [Populus trichocarpa] gi|222832573|gb|EEE71050.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449487560|ref|XP_004157687.1| PREDICTED: metacaspase-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224137094|ref|XP_002327020.1| predicted protein [Populus trichocarpa] gi|222835335|gb|EEE73770.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118486435|gb|ABK95057.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2204798367 MC1 "metacaspase 1" [Arabidops 0.795 0.850 0.711 1.1e-126
TAIR|locus:2117288418 MC2 "metacaspase 2" [Arabidops 0.681 0.638 0.681 1.4e-118
TAIR|locus:2173398362 MC3 "metacaspase 3" [Arabidops 0.811 0.878 0.462 9.3e-75
UNIPROTKB|A4QTY2396 MCA1 "Metacaspase-1" [Magnapor 0.448 0.444 0.428 1.7e-56
POMBASE|SPCC1840.04425 pca1 "metacaspase Pca1" [Schiz 0.392 0.362 0.461 9.7e-53
SGD|S000005723432 MCA1 "Ca2+-dependent cysteine 0.446 0.405 0.458 5.3e-49
CGD|CAL0003470448 MCA1 [Candida albicans (taxid: 0.403 0.352 0.433 1.5e-48
UNIPROTKB|Q5ANA8448 MCA1 "Metacaspase-1" [Candida 0.403 0.352 0.433 1.5e-48
ASPGD|ASPL0000043471420 AN2503 [Emericella nidulans (t 0.443 0.414 0.416 7.6e-46
TAIR|locus:2207430 410 MC5 "metacaspase 5" [Arabidops 0.364 0.348 0.409 3.3e-30
TAIR|locus:2204798 MC1 "metacaspase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
 Identities = 232/326 (71%), Positives = 267/326 (81%)

Query:     3 MLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADXXXXXXXXXXXXXXXYQPGHVPPSAV 62
             MLV+CS CRT LQLP GA+SIRCA+CQA+THIAD                 P   P SA 
Sbjct:    14 MLVNCSGCRTPLQLPSGARSIRCALCQAVTHIADPRTA-------------PPPQPSSAP 60

Query:    63 APSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESS 122
             +P P  HAPPGQ PH  GRKRA+I G+SYR + HELKGCINDA+CM+++L N+FKF   S
Sbjct:    61 SPPPQIHAPPGQLPHPHGRKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDS 120

Query:   123 IVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYD 182
             I+MLTEE+ DP + PTK NMRMALYWL+QGC  GDSL+FH+SGHGS+QRNYNG+EVDGYD
Sbjct:   121 ILMLTEEETDPYRIPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYD 180

Query:   183 ETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKY 242
             ETLCP+DFETQGMIVDDEIN T+VRPLP G +LH+IIDACHSGTVLDLPFLCRM+R G+Y
Sbjct:   181 ETLCPLDFETQGMIVDDEINATIVRPLPHGVKLHSIIDACHSGTVLDLPFLCRMNRAGQY 240

Query:   243 IWEDHRPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAIERG-H 301
             +WEDHRPRSG+WKGT+GGEAIS SGCDD+QTSADTSALSKITSTGAMT+ FIQAIER   
Sbjct:   241 VWEDHRPRSGLWKGTAGGEAISISGCDDDQTSADTSALSKITSTGAMTFCFIQAIERSAQ 300

Query:   302 GATYGSMLNSMRSTIRNTDSGSELSG 327
             G TYGS+LNSMR+TIRNT +    SG
Sbjct:   301 GTTYGSLLNSMRTTIRNTGNDGGGSG 326
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0004197 "cysteine-type endopeptidase activity" evidence=IDA
GO:0043068 "positive regulation of programmed cell death" evidence=IGI;IDA
GO:0005515 "protein binding" evidence=IPI
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0045087 "innate immune response" evidence=RCA
TAIR|locus:2117288 MC2 "metacaspase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173398 MC3 "metacaspase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A4QTY2 MCA1 "Metacaspase-1" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPCC1840.04 pca1 "metacaspase Pca1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000005723 MCA1 "Ca2+-dependent cysteine protease" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0003470 MCA1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ANA8 MCA1 "Metacaspase-1" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000043471 AN2503 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2207430 MC5 "metacaspase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XJE6MCA1_ARATH3, ., 4, ., 2, 2, ., -0.70570.85200.9100yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
pfam00656228 pfam00656, Peptidase_C14, Caspase domain 1e-42
TIGR0105331 TIGR01053, LSD1, zinc finger domain, LSD1 subclass 1e-09
pfam0694325 pfam06943, zf-LSD1, LSD1 zinc finger 5e-07
>gnl|CDD|216047 pfam00656, Peptidase_C14, Caspase domain Back     alignment and domain information 
 Score =  148 bits (376), Expect = 1e-42
 Identities = 56/243 (23%), Positives = 81/243 (33%), Gaps = 32/243 (13%)

Query: 82  KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYN 141
             ALI+G +Y      L+GC NDA  +  +L  R  F           + +     T   
Sbjct: 1   GLALIIGNNYFGHAAPLRGCDNDAEALAKLLQ-RLGF-----------EVEVFDDLTAEE 48

Query: 142 MRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEI 201
           +R AL        PGDS +  +SGHG Q   Y      G D  L PVD       +DD  
Sbjct: 49  IRRALREFAARADPGDSFVVVYSGHGVQGEVY------GGDGYLVPVDA------LDDVF 96

Query: 202 NTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKYIWEDHRPRSGMWKGTSGGE 261
           N      L    +L  IIDAC  G + D                D    +G+ K  +  +
Sbjct: 97  NGLNCPSLKGKPKL-FIIDACRGGPLDDGVKSDSGSSGESE-SVDDSEAAGLSKIPAPAD 154

Query: 262 AISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAI-ERGHGATYGSMLNSMRSTIRNTD 320
            +        Q S   +      S      +  Q + E   G     +L  +   + +  
Sbjct: 155 FLVAYSTTPGQVSYRGT-----GSGSWFIQALCQVLREYAPGLDLLDILTRVNRKVADAT 209

Query: 321 SGS 323
              
Sbjct: 210 GKK 212

Length = 228
>gnl|CDD|130125 TIGR01053, LSD1, zinc finger domain, LSD1 subclass Back     alignment and domain information
>gnl|CDD|191646 pfam06943, zf-LSD1, LSD1 zinc finger Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
KOG1546362 consensus Metacaspase involved in regulation of ap 100.0
PF00656248 Peptidase_C14: Caspase domain; InterPro: IPR011600 100.0
cd00032243 CASc Caspase, interleukin-1 beta converting enzyme 99.8
smart00115241 CASc Caspase, interleukin-1 beta converting enzyme 99.78
PF01650256 Peptidase_C13: Peptidase C13 family; InterPro: IPR 99.51
COG4249380 Uncharacterized protein containing caspase domain 99.48
TIGR0105331 LSD1 zinc finger domain, LSD1 subclass. This model 99.0
PF0694325 zf-LSD1: LSD1 zinc finger; InterPro: IPR005735 Zin 98.8
PF14538154 Raptor_N: Raptor N-terminal CASPase like domain 98.26
KOG1349309 consensus Gpi-anchor transamidase [Posttranslation 98.16
KOG1348 477 consensus Asparaginyl peptidases [Posttranslationa 97.91
COG5206382 GPI8 Glycosylphosphatidylinositol transamidase (GP 97.77
COG4249 380 Uncharacterized protein containing caspase domain 97.75
PF12770287 CHAT: CHAT domain 97.18
KOG1517 1387 consensus Guanine nucleotide binding protein MIP1 96.76
PF1371937 zinc_ribbon_5: zinc-ribbon domain 95.08
PF1371736 zinc_ribbon_4: zinc-ribbon domain 93.82
PF1012251 Mu-like_Com: Mu-like prophage protein Com; InterPr 92.5
TIGR0209838 MJ0042_CXXC MJ0042 family finger-like domain. This 91.95
PRK0039846 rpoP DNA-directed RNA polymerase subunit P; Provis 90.52
PF0481040 zf-Sec23_Sec24: Sec23/Sec24 zinc finger; InterPro: 82.02
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=6.1e-70  Score=519.88  Aligned_cols=319  Identities=45%  Similarity=0.789  Sum_probs=268.1

Q ss_pred             CCCcccCCCCCCccccCCCCceeeccccCceecccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 016243            1 MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRSGPPPPSSSSSSSYQPGHVPPSAVAPSPYNHAPPGQPPHAQG   80 (392)
Q Consensus         1 ~~~~~~C~~C~~~l~~p~~a~~vrC~~C~~vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (392)
                      +.+.++|+ |++++|+||||+. ||+.||+||.+..++..|||..+    ++         +.|+|+   |+.++|...+
T Consensus         1 ~~~~~~~~-~~~p~~~pp~ar~-q~~~~~~~~~~~~~~~~ppP~~~----~~---------~~PpPq---~~~~~~~~~g   62 (362)
T KOG1546|consen    1 PNNLVGCN-CQRPMAPPPGARY-QCAGCHAVTQIAQPRIQPPPQPS----SY---------PNPPPQ---PPYQYPQMAG   62 (362)
T ss_pred             CCccccCC-CCCCCCCCCCCcc-cccccceeeeecccCcCCCCCCC----CC---------CCCCCC---CCCCCccccc
Confidence            35789998 9999999999999 99999999999987776665432    11         111121   2345677889


Q ss_pred             ceEEEEEEeCCCCCCCCCcchHHHHHHHHHHHHhccCCCCCceEEccCCCCCCCCCccHHHHHHHHHHHHHhCCCCCEEE
Q 016243           81 RKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLL  160 (392)
Q Consensus        81 ~k~ALlIGI~Y~~~~~~L~g~~nDa~~m~~~L~~~~Gf~~~~I~~Ltd~~~~~~~~pT~~nI~~al~~L~~~~~~gD~ll  160 (392)
                      ||+||||||||.++..+|+||+|||.+|+++|.++|||+.++|++|||++.++.++||++||++||+||++.+++||+||
T Consensus        63 krrAvLiGINY~gTk~ELrGCINDv~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~Lv  142 (362)
T KOG1546|consen   63 KRRAVLIGINYPGTKNELRGCINDVHRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLV  142 (362)
T ss_pred             cceEEEEeecCCCcHHHHhhhHHHHHHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCCCCCCCCCCcceeEEeccCCCCCcccHHHHHHhhcCcCCCCCeEEEEEeCCCCCCCCCCcchhccc---
Q 016243          161 FHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMD---  237 (392)
Q Consensus       161 fYFSGHG~~~~d~~gde~dG~de~Lvp~D~~~~g~i~d~eL~~~L~~~l~~g~~l~vIlD~C~SG~~~~~p~~~~~~---  237 (392)
                      |||||||.+.++.+|||.||+||+|+|.|++.+|.|.|||+++.||++|++|+++++|+|+||||+++|+|++++++   
T Consensus       143 fHYSGHGtr~~~~~gDe~dG~DE~I~P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgliDlp~i~~~~~~i  222 (362)
T KOG1546|consen  143 FHYSGHGTRQPDTNGDEVDGYDETIVPCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLIDLPEIERTKGVI  222 (362)
T ss_pred             EEecCCCCcCCCCCCCCCCCCcceeecccccccccccchHHHHHHHhccCCCceEEEEeecccCCCcccchhheeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998   


Q ss_pred             ccCccccccCCCCCCccccc-------------------------------------CCCCEEEEEecCCCCcccccccC
Q 016243          238 RQGKYIWEDHRPRSGMWKGT-------------------------------------SGGEAISFSGCDDNQTSADTSAL  280 (392)
Q Consensus       238 r~g~~~~e~~~p~~~~~k~~-------------------------------------~~g~~i~~SAc~~~q~A~e~~~~  280 (392)
                      |.+.+.||++++..+.++++                                     +..++|+||+|+++|+|+|....
T Consensus       223 r~~~l~~e~~~d~l~~~tG~~~ge~~~i~~~l~d~f~~dts~~~~~~~~~~~~~~~~~~d~~illSgcqadqtSad~~~~  302 (362)
T KOG1546|consen  223 RNRNLPWEDHRDLLKAQTGTDGGEVGKIRGCLDDIFGEDTSPLPNGTIGDLGRQLKDSHDNGILLSGCQADQTSADASTY  302 (362)
T ss_pred             ccCccchHHhHHHHHhhcCCCCceeeeeecchhhhhcccCCCCCCcchhhhhhhcccCCCCceEEecccccccccccccC
Confidence            88888888766432222221                                     12456888888888888887766


Q ss_pred             CCCCCCChhHHHHHHHHHcCCC-CCHHHHHHHHHHHHhccCCCCCcccCCcccccceeeeccCCCCCCCcccceEEeecc
Q 016243          281 SKITSTGAMTYSFIQAIERGHG-ATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQVFMFVMFA  359 (392)
Q Consensus       281 g~~~~~G~FT~~Ll~aL~~~~~-iT~~~L~~~vr~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~p~l~~~~  359 (392)
                      |  ...|+|++++.+.|.++++ ++..+|.-..+..+++..                            +.|+|+|.   
T Consensus       303 G--~~~gAms~Aiq~i~~~n~g~~~~~~lvl~~~~~~~~~g----------------------------~sQ~P~L~---  349 (362)
T KOG1546|consen  303 G--HLYGAMSNAIQEILTENKGRITNKLLVLRARGALKKQG----------------------------FSQEPGLY---  349 (362)
T ss_pred             C--cchhHHHHHHHHHHhcCcccchhHHHHHHHhhhhhccC----------------------------cccCcccc---
Confidence            5  3478888888888877654 455555544444443322                            57999999   


Q ss_pred             ccccCCCCCccccccchh
Q 016243          360 NCYGYGLSSSLFDRFVSR  377 (392)
Q Consensus       360 ~~~~~~~~~~~~d~~~~~  377 (392)
                             +++.||.+..-
T Consensus       350 -------csd~~~~~~~~  360 (362)
T KOG1546|consen  350 -------CSDPFDVAPFI  360 (362)
T ss_pred             -------CCcccccccee
Confidence                   99999987653

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00032 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis) Back     alignment and domain information
>smart00115 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues Back     alignment and domain information
>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>TIGR01053 LSD1 zinc finger domain, LSD1 subclass Back     alignment and domain information
>PF06943 zf-LSD1: LSD1 zinc finger; InterPro: IPR005735 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF14538 Raptor_N: Raptor N-terminal CASPase like domain Back     alignment and domain information
>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>PF12770 CHAT: CHAT domain Back     alignment and domain information
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF13719 zinc_ribbon_5: zinc-ribbon domain Back     alignment and domain information
>PF13717 zinc_ribbon_4: zinc-ribbon domain Back     alignment and domain information
>PF10122 Mu-like_Com: Mu-like prophage protein Com; InterPro: IPR019294 Members of this entry belong to the Com family of proteins that act as translational regulators of mom [, ] Back     alignment and domain information
>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain Back     alignment and domain information
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional Back     alignment and domain information
>PF04810 zf-Sec23_Sec24: Sec23/Sec24 zinc finger; InterPro: IPR006895 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
4f6o_A350 Crystal Structure Of The Yeast Metacaspase Yca1 Len 4e-44
4af8_A367 The Structural Basis For Metacaspase Substrate Spec 3e-33
4afr_A367 The Structure Of Metacaspase 2 (C213a Mutant) From 4e-33
4afp_A367 The Structure Of Metacaspase 2 From T. Brucei Deter 7e-33
3bij_A285 Crystal Structure Of Protein Gsu0716 From Geobacter 2e-07
>pdb|4F6O|A Chain A, Crystal Structure Of The Yeast Metacaspase Yca1 Length = 350 Back     alignment and structure 
Iteration: 1

 Score =  175 bits (444), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 156/285 (54%), Gaps = 42/285 (14%)
Query: 72  PGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDP 131
           P Q     GR++ALI+G++Y  + ++L+GCINDA  +   LTN + +    IV+LT++  
Sbjct: 44  PYQYSQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQN 103
Query: 132 DPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFE 191
           D ++ PT+ NM  A+ WL++  QP DSL  H+SGHG Q  + +G+E DG D+ + PVDFE
Sbjct: 104 DLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFE 163
Query: 192 TQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFLCRMDRQGKY--IWED--- 246
           TQG I+DDE++  +V+PL +G RL A+ D+CHSGTVLDLP+        K   IW+D   
Sbjct: 164 TQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTYSTKGIIKEPNIWKDVGQ 223
Query: 247 -------------------------HRPRSGMWKGT----------SGGEAISFSGCDDN 271
                                       + GM              S  + +  SG  DN
Sbjct: 224 DGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDN 283
Query: 272 QTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTI 316
           QTSAD  A+    +TGAM+++FI+ +      +Y S+L +MR  +
Sbjct: 284 QTSAD--AVEDGQNTGAMSHAFIKVMTLQPQQSYLSLLQNMRKEL 326
>pdb|4AF8|A Chain A, The Structural Basis For Metacaspase Substrate Specificity And Activation Length = 367 Back     alignment and structure
>pdb|4AFR|A Chain A, The Structure Of Metacaspase 2 (C213a Mutant) From T. Brucei Length = 367 Back     alignment and structure
>pdb|4AFP|A Chain A, The Structure Of Metacaspase 2 From T. Brucei Determined In The Presence Of Samarium Length = 367 Back     alignment and structure
>pdb|3BIJ|A Chain A, Crystal Structure Of Protein Gsu0716 From Geobacter Sulfurreducens. Northeast Structural Genomics Target Gsr13 Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1e-77
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 5e-77
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 7e-53
3uoa_B 390 Mucosa-associated lymphoid tissue lymphoma transl 8e-18
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Length = 350 Back     alignment and structure
 Score =  242 bits (619), Expect = 1e-77
 Identities = 111/321 (34%), Positives = 167/321 (52%), Gaps = 44/321 (13%)

Query: 40  GPPPPSSSSSSSYQPGH--VPPSAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHE 97
           G   P+ ++S+ Y P      P     +      P Q     GR++ALI+G++Y  + ++
Sbjct: 10  GYNNPNVNASNMYGPPQNMSLPPPQTQTIQGTDQPYQYSQCTGRRKALIIGINYIGSKNQ 69

Query: 98  LKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGD 157
           L+GCINDA  +   LTN + +    IV+LT++  D ++ PT+ NM  A+ WL++  QP D
Sbjct: 70  LRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPND 129

Query: 158 SLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHA 217
           SL  H+SGHG Q  + +G+E DG D+ + PVDFETQG I+DDE++  +V+PL +G RL A
Sbjct: 130 SLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTA 189

Query: 218 IIDACHSGTVLDLPFLCRMDRQGK--YIWEDHRPR--------------------SGMWK 255
           + D+CHSGTVLDLP+        K   IW+D                          ++K
Sbjct: 190 LFDSCHSGTVLDLPYTYSTKGIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSIFK 249

Query: 256 GTSGGEA------------------ISFSGCDDNQTSADTSALSKITSTGAMTYSFIQAI 297
              GG                    +  SG  DNQTSAD  A+    +TGAM+++FI+ +
Sbjct: 250 TVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSAD--AVEDGQNTGAMSHAFIKVM 307

Query: 298 ERGHGATYGSMLNSMRSTIRN 318
                 +Y S+L +MR  +  
Sbjct: 308 TLQPQQSYLSLLQNMRKELAG 328
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Length = 367 Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Length = 285 Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Length = 390 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 100.0
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 100.0
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 100.0
3uoa_B 390 Mucosa-associated lymphoid tissue lymphoma transl 99.95
1m72_A272 Caspase-1; caspase, cysteine protease, hydrolase-h 99.73
2j32_A250 Caspase-3; Pro-caspase3, thiol protease, hydrolase 99.71
3e4c_A302 Caspase-1; zymogen, inflammasome, ICE, IL-1B, inna 99.71
1f1j_A305 Caspase-7 protease; caspase-7, cysteine protease, 99.71
2nn3_C310 Caspase-1; cysteine protease, hydrolase; 3.00A {Sp 99.7
3sir_A259 Caspase; hydrolase; 2.68A {Drosophila melanogaster 99.69
4ehd_A277 Caspase-3; caspase, apoptosis, allosteric inhibiti 99.68
1nw9_B277 Caspase 9, apoptosis-related cysteine protease; XI 99.68
3od5_A278 Caspase-6; caspase domain, apoptotic protease, hyd 99.66
3h11_B271 Caspase-8; cell death, apoptosis, caspase, alterna 99.66
2fp3_A316 Caspase NC; apoptosis, initiator caspase activatio 99.66
2h54_A178 Caspase-1; allosteric site, dimer interface, hydro 99.48
3h11_A272 CAsp8 and FADD-like apoptosis regulator; cell deat 99.07
1pyo_A167 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 98.9
2dko_A146 Caspase-3; low barrier hydrogen bond, caspase, dru 98.8
1qtn_A164 Caspase-8; apoptosis, dithiane-DIOL, caspase, cyst 98.72
2ql9_A173 Caspase-7; cysteine protease, apoptosis, thiol pro 98.51
3p45_A179 Caspase-6; protease, huntington'S disease, physio 98.48
1gh9_A71 8.3 kDa protein (gene MTH1184); beta+alpha complex 90.81
1sc3_B88 Interleukin-1 beta convertase; malonate-bound casp 83.49
1pyo_B105 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 81.1
2ql9_B97 Caspase-7; cysteine protease, apoptosis, thiol pro 80.81
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=2.3e-58  Score=456.61  Aligned_cols=262  Identities=40%  Similarity=0.723  Sum_probs=203.9

Q ss_pred             CCCCCCCceEEEEEEeCCCCCCCCCcchHHHHHHHHHHHHhccCCCCCceEEccCCCCCCCCCccHHHHHHHHHHHHHhC
Q 016243           74 QPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGC  153 (392)
Q Consensus        74 ~~~~~~~~k~ALlIGI~Y~~~~~~L~g~~nDa~~m~~~L~~~~Gf~~~~I~~Ltd~~~~~~~~pT~~nI~~al~~L~~~~  153 (392)
                      .++...++|+|||||||||+...+|++|+|||+.|+++|++++||++++|++|+|++.++...||++||+++|+||++++
T Consensus        46 ~~s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a  125 (350)
T 4f6o_A           46 QYSQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDA  125 (350)
T ss_dssp             CCCCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTC
T ss_pred             ccCCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhC
Confidence            35677899999999999888889999999999999999999899999999999998766677899999999999999999


Q ss_pred             CCCCEEEEEEecCccccCCCCCCCCCCcceeEEeccCCCCCcccHHHHHHhhcCcCCCCCeEEEEEeCCCCCCCCCCcch
Q 016243          154 QPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLVRPLPRGARLHAIIDACHSGTVLDLPFL  233 (392)
Q Consensus       154 ~~gD~llfYFSGHG~~~~d~~gde~dG~de~Lvp~D~~~~g~i~d~eL~~~L~~~l~~g~~l~vIlD~C~SG~~~~~p~~  233 (392)
                      ++||+|||||||||.+.++.+|+|.||+||+|||+|++..|.|+|+||.++|+++++++++|++|+||||||+++|+|+.
T Consensus       126 ~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l~~g~~vt~IlD~ChSGt~ldlp~~  205 (350)
T 4f6o_A          126 QPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYT  205 (350)
T ss_dssp             CTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTTTCCTTCEEEEEECSSSCTTTTCCSEE
T ss_pred             CCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhcCCCCeEEEEEccCCCCcccccccc
Confidence            99999999999999999999999999999999999998888999999999999999999999999999999999999997


Q ss_pred             hcccccCcc----ccccCCC--------------------CCCcc------------------cccCCCCEEEEEecCCC
Q 016243          234 CRMDRQGKY----IWEDHRP--------------------RSGMW------------------KGTSGGEAISFSGCDDN  271 (392)
Q Consensus       234 ~~~~r~g~~----~~e~~~p--------------------~~~~~------------------k~~~~g~~i~~SAc~~~  271 (392)
                      ++.  .|.+    .|++...                    ..+++                  .+++++.+|+||||.++
T Consensus       206 ~~~--~g~~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~  283 (350)
T 4f6o_A          206 YST--KGIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDN  283 (350)
T ss_dssp             EET--TEEEECCCC---------------------------------------------------CCCSEEEEEEEEC--
T ss_pred             ccc--ccccCcchhhhhccccccchhhhhccccchhhcccchhhhhhhccccccccchhhhhhccCCCCCEEEEEecCCC
Confidence            753  2211    2332110                    00011                  13557889999999999


Q ss_pred             CcccccccCCCCCCCChhHHHHHHHHHcCCCCCHHHHHHHHHHHHhccCCCCCcccCCcccccceeeeccCCCCCCCccc
Q 016243          272 QTSADTSALSKITSTGAMTYSFIQAIERGHGATYGSMLNSMRSTIRNTDSGSELSGAGGLVTSLVTMLLTGGSLSGGFRQ  351 (392)
Q Consensus       272 q~A~e~~~~g~~~~~G~FT~~Ll~aL~~~~~iT~~~L~~~vr~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  351 (392)
                      |+|+|+...|  ..+|+|||+||++|+.++.+||.+|++.||+.|+..                             ..|
T Consensus       284 QtSaD~~~~g--~~~GAmTyafi~aL~~~p~~tY~~Ll~~~r~~L~~k-----------------------------ysQ  332 (350)
T 4f6o_A          284 QTSADAVEDG--QNTGAMSHAFIKVMTLQPQQSYLSLLQNMRKELAGK-----------------------------YSQ  332 (350)
T ss_dssp             -------------CCCHHHHHHHHHHHHCCCCBHHHHHHHHHHHHTTT-----------------------------CSC
T ss_pred             CchhhhccCC--ceeehhHHHHHHHHHHCCCCCHHHHHHHHHHHHHhc-----------------------------CCC
Confidence            9999998765  479999999999999988899999999999999742                             359


Q ss_pred             ceEEeeccccccCCCCCccccccchhhh
Q 016243          352 VFMFVMFANCYGYGLSSSLFDRFVSRLL  379 (392)
Q Consensus       352 ~p~l~~~~~~~~~~~~~~~~d~~~~~~~  379 (392)
                      +|||+          +|.++|++. +|+
T Consensus       333 ~PQLs----------~s~~~d~~~-~f~  349 (350)
T 4f6o_A          333 KPQLS----------SSHPIDVNL-QFI  349 (350)
T ss_dssp             EEEEE----------ESSCCCTTS-BCC
T ss_pred             Cceec----------ccCCCCCCc-ccc
Confidence            99999          999999977 354
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Back     alignment and structure
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B Back     alignment and structure
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A Back     alignment and structure
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens} Back     alignment and structure
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A* Back     alignment and structure
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda} Back     alignment and structure
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A Back     alignment and structure
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A Back     alignment and structure
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A Back     alignment and structure
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B* Back     alignment and structure
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B* Back     alignment and structure
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster} Back     alignment and structure
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ... Back     alignment and structure
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A Back     alignment and structure
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A Back     alignment and structure
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ... Back     alignment and structure
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A* Back     alignment and structure
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A Back     alignment and structure
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens} Back     alignment and structure
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1 Back     alignment and structure
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ... Back     alignment and structure
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B Back     alignment and structure
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 392
g1sc3.1261 c.17.1.1 (A:,B:) Interleukin-1beta converting enzy 1e-04

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
d1nw9b_277 Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} 99.88
g1sc3.1261 Interleukin-1beta converting enzyme (a cysteine pr 99.86
g1qtn.1242 Caspase-8 {Human (Homo sapiens) [TaxId: 9606]} 99.82
d1m72a_256 Caspase-1 {Fall armyworm (Spodoptera frugiperda) [ 99.79
g1pyo.1257 Caspase-2 {Human (Homo sapiens) [TaxId: 9606]} 99.77
g1nme.1238 Apopain (caspase-3, cpp32) {Human (Homo sapiens) [ 99.76
d1f1ja_245 Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} 99.69
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Caspase-like
superfamily: Caspase-like
family: Caspase catalytic domain
domain: Caspase-9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-21  Score=185.26  Aligned_cols=215  Identities=13%  Similarity=0.064  Sum_probs=135.9

Q ss_pred             CCceEEEEEEeC-CCCC--CCCCcchHHHHHHHHHHHHhccCCCCCceEEccCCCCCCCCCccHHHHHHHHHHHHH-hCC
Q 016243           79 QGRKRALIVGVS-YRHT--NHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQ-GCQ  154 (392)
Q Consensus        79 ~~~k~ALlIGI~-Y~~~--~~~L~g~~nDa~~m~~~L~~~~Gf~~~~I~~Ltd~~~~~~~~pT~~nI~~al~~L~~-~~~  154 (392)
                      .+|-+|||||++ |...  ..+..|+.+||+.|+++|+ .+||.   |.++.|        +|+++|++++.++.. ..+
T Consensus        19 ~prG~aLII~n~~f~~~~~l~~r~Ga~~Da~~l~~~l~-~lGF~---V~~~~n--------lt~~~~~~~l~~~~~~~~~   86 (277)
T d1nw9b_          19 EPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFS-SLHFM---VEVKGD--------LTAKKMVLALLELARQDHG   86 (277)
T ss_dssp             SSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHH-HTTEE---EEEEES--------CCHHHHHHHHHHHHHSCCT
T ss_pred             CcccEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHH-HCCCE---EEEeeC--------CCHHHHHHHHHHhhhhccc
Confidence            466799999998 6442  3566789999999999997 58995   888887        799999999988766 468


Q ss_pred             CCCEEEEEEecCccccCCCCCCCCCCcceeEEeccCCCCCcccHHHHHHhhc-C---cCCCCCeEEEEEeCCCCCCCCCC
Q 016243          155 PGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINTTLV-R---PLPRGARLHAIIDACHSGTVLDL  230 (392)
Q Consensus       155 ~gD~llfYFSGHG~~~~d~~gde~dG~de~Lvp~D~~~~g~i~d~eL~~~L~-~---~l~~g~~l~vIlD~C~SG~~~~~  230 (392)
                      ++|.+||||+|||.+....+         ++.+.|......+.-+++...+. .   .++ +...++||||||++.....
T Consensus        87 ~~d~~v~~~~gHG~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~-~kpki~~idaCr~~~~~~~  156 (277)
T d1nw9b_          87 ALDCCVVVILSHGCQASHLQ---------FPGAVYGTDGCPVSVEKIVNIFNGTSCPSLG-GKPKLFFIQACGGEQKDHG  156 (277)
T ss_dssp             TCSEEEEEEEEEEECCCCSS---------SCCEEECTTSCEEEHHHHHHTTCTTTCGGGT-TSCEEEEEEEEC-------
T ss_pred             CCCEEEEEEeCCCccccccc---------ccCcccCCccccccHHHHHHHhHHhhhhhcc-cCcEEEEEecccCCccccc
Confidence            99999999999999865432         33444433222333344443331 1   122 3445799999999877543


Q ss_pred             cchhcccc---------cCc-cccccC----CCCCCcccccCCCCEEEEEecCCCCcccccccCCCCCCCChhHHHHHHH
Q 016243          231 PFLCRMDR---------QGK-YIWEDH----RPRSGMWKGTSGGEAISFSGCDDNQTSADTSALSKITSTGAMTYSFIQA  296 (392)
Q Consensus       231 p~~~~~~r---------~g~-~~~e~~----~p~~~~~k~~~~g~~i~~SAc~~~q~A~e~~~~g~~~~~G~FT~~Ll~a  296 (392)
                      ........         ... ..+...    ........-......++..|+.+++.|++..     ..+|+||++|++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~i~~st~~g~~a~~~~-----~~gS~f~~~L~~~  231 (277)
T d1nw9b_         157 FEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDP-----KSGSWYVETLDDI  231 (277)
T ss_dssp             --------------------CBCCC------------CCCCCSCSEEEEEECCCCBSSTTCT-----TSCBHHHHHHHHH
T ss_pred             ccccccCcccccccccccccccchhcccccccccccccccCCcccceEEEecccceEEecCC-----CCCCHHHHHHHHH
Confidence            22110000         000 000000    0000000112234567777888999998764     3689999999999


Q ss_pred             HHc-CCCCCHHHHHHHHHHHHhccC
Q 016243          297 IER-GHGATYGSMLNSMRSTIRNTD  320 (392)
Q Consensus       297 L~~-~~~iT~~~L~~~vr~~v~~~~  320 (392)
                      |++ .+..++.+++..|++.|.+..
T Consensus       232 l~~~~~~~~l~~il~~V~~~V~~~~  256 (277)
T d1nw9b_         232 FEQWAHSEDLQSLLLRVANAVSVKG  256 (277)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHHHTTC
T ss_pred             HHHhCCCCCHHHHHHHHHHHHHHhc
Confidence            997 345899999999999997665
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]} Back     information, alignment and structure
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure