Citrus Sinensis ID: 016306


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
MGKTSVQVPQYSNKDVVFSGSGIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEVGFKMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEESLIS
cccccccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccHHHHHccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHccccHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccc
cccccEEEEEcccccEEEEcccEEEEccccccccHHHHHHHHHHHHHHEcccccEEHHHHHHcccccccccccHcHHHcccccccEcccHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHccccHHcccccHHHHHcccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccc
mgktsvqvpqysnkdvvfsgsgiklqcssrksigsksfFASIGDAAnslensaqlPFINLLSkhmslpepsfridripqlALGEVLEAGEKVVKKEVGFKMrikignpslrKLISGAVAGavsrtavapLETIRTHLmvgscgnssgeVFDAILKsdgwkglfrgNFVNVIRVAPSKAIELFAYDTVkkhlapkpgeepklpipassiagaVAGFsstlctyplellKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIgvvpyaatnyfAYDTLRKAYKKAFTKEEIGNIVTLLIGSaagaisssatfPLEVARKHMQAGALNGRQYQNMLHALASILEkeglpglykglgpsciklvpaagiSFMCYEACKKILIEKEESLIS
mgktsvqvpqysnkdvvfsgsgIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVkkevgfkmrikignpslrKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEESLIS
MGKTSVQVPQYSNKDVVFSGSGIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALgevleagekvvkkevgfkMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLigsaagaisssaTFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEESLIS
****************VF****IKL************FFASIG*********AQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEVGFKMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHL***************SIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIE*******
******QVPQYSNKDVVFSGSGIKLQCSS**************************PFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVK************NPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLA**P******PIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKK****EEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGAL**RQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEK******
********PQYSNKDVVFSGSGIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEVGFKMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEESLIS
***TSVQVPQYSNKDVVFSGSGIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEVGFKMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKE*****
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
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MGKTSVQVPQYSNKDVVFSGSGIKLQCSSRKSIGSKSFFASIGDAANSLENSAQLPFINLLSKHMSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEVGFKMRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEESLIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query392 2.2.26 [Sep-21-2011]
Q9SUV1392 Adenine nucleotide transp yes no 0.734 0.734 0.747 1e-125
P29518436 Adenine nucleotide transp N/A no 0.714 0.642 0.677 1e-103
Q9LJX5348 Probable mitochondrial ad no no 0.698 0.787 0.402 2e-55
Q0P483321 Mitochondrial coenzyme A yes no 0.788 0.962 0.369 2e-47
Q9BV35468 Calcium-binding mitochond yes no 0.75 0.628 0.337 1e-46
Q5PQ27327 Mitochondrial coenzyme A N/A no 0.711 0.853 0.371 2e-46
Q54MZ4434 Mitochondrial substrate c yes no 0.696 0.629 0.358 3e-46
Q6GQS1467 Calcium-binding mitochond yes no 0.744 0.625 0.338 7e-46
Q05AQ3327 Mitochondrial coenzyme A yes no 0.711 0.853 0.368 5e-45
A5PJZ1477 Calcium-binding mitochond yes no 0.683 0.561 0.361 6e-45
>sp|Q9SUV1|BRT1_ARATH Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/289 (74%), Positives = 248/289 (85%), Gaps = 1/289 (0%)

Query: 101 MRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWK 160
           ++IKI NPSLR+L+SGAVAGAVSRT VAPLETIRTHLMVGS GNSS EVF  I+K +GW 
Sbjct: 102 LKIKIANPSLRRLLSGAVAGAVSRTVVAPLETIRTHLMVGSGGNSSTEVFSDIMKHEGWT 161

Query: 161 GLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLC 220
           GLFRGN VNVIRVAP++A+ELF ++TV K L+P  G+E K+PIPAS +AGA AG S TL 
Sbjct: 162 GLFRGNLVNVIRVAPARAVELFVFETVNKKLSPPHGQESKIPIPASLLAGACAGVSQTLL 221

Query: 221 TYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYD 280
           TYPLEL+KTR+TIQRGVYK + DAFL I+REEGP ELYRGL  SLIGVVPYAATNYFAYD
Sbjct: 222 TYPLELVKTRLTIQRGVYKGIFDAFLKIIREEGPTELYRGLAPSLIGVVPYAATNYFAYD 281

Query: 281 TLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGR-QYQNML 339
           +LRKAY+    +E+IGNI TLLIGS AGA+SS+ATFPLEVARKHMQ GA++GR  Y+NML
Sbjct: 282 SLRKAYRSFSKQEKIGNIETLLIGSLAGALSSTATFPLEVARKHMQVGAVSGRVVYKNML 341

Query: 340 HALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEE 388
           HAL +ILE EG+ G YKGLGPSC+KLVPAAGISFMCYEACKKILIE  +
Sbjct: 342 HALVTILEHEGILGWYKGLGPSCLKLVPAAGISFMCYEACKKILIENNQ 390




Probable mitochondrial adenylate carrier that catalyzes the transport of ATP, ADP and AMP, but not ADP-glucose. Recombinant BT1 shows a unidirectional mode of transport in intact E.coli cells. May function as a plastidial nucleotide uniport carrier required to export newly synthesized adenylates into the cytosol. May be involved in abiotic stress response.
Arabidopsis thaliana (taxid: 3702)
>sp|P29518|BT1_MAIZE Adenine nucleotide transporter BT1, chloroplastic/amyloplastic/mitochondrial OS=Zea mays GN=BT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LJX5|BRTL1_ARATH Probable mitochondrial adenine nucleotide transporter BTL1 OS=Arabidopsis thaliana GN=At3g20240 PE=2 SV=1 Back     alignment and function description
>sp|Q0P483|S2542_DANRE Mitochondrial coenzyme A transporter SLC25A42 OS=Danio rerio GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2 Back     alignment and function description
>sp|Q5PQ27|S2542_XENLA Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1 Back     alignment and function description
>sp|Q05AQ3|S2542_XENTR Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
225445464400 PREDICTED: protein brittle-1, chloroplas 0.956 0.937 0.730 1e-154
357478051398 Mitochondrial substrate carrier family p 0.948 0.934 0.671 1e-148
255566981413 Mitochondrial deoxynucleotide carrier, p 0.989 0.939 0.690 1e-147
297738937391 unnamed protein product [Vitis vinifera] 0.813 0.815 0.809 1e-145
225430247397 PREDICTED: protein brittle-1, chloroplas 0.971 0.959 0.650 1e-138
147772995397 hypothetical protein VITISV_005135 [Viti 0.971 0.959 0.648 1e-138
356565187409 PREDICTED: protein brittle-1, chloroplas 0.989 0.948 0.684 1e-137
357466267400 Protein brittle-1 [Medicago truncatula] 0.966 0.947 0.636 1e-135
255548956381 ADP,ATP carrier protein, putative [Ricin 0.762 0.784 0.773 1e-134
296082017376 unnamed protein product [Vitis vinifera] 0.755 0.787 0.787 1e-134
>gi|225445464|ref|XP_002281941.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic [Vitis vinifera] gi|147768735|emb|CAN60465.1| hypothetical protein VITISV_012495 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/390 (73%), Positives = 331/390 (84%), Gaps = 15/390 (3%)

Query: 13  NKDVVFSGSGIKLQCSSRKS-IGSKSFFASIGDAA-------NSLENSAQLPFINLLSKH 64
           N DV+FS SG+  Q S +++       FAS+G A        NS +N ++ PF N+ +K+
Sbjct: 12  NGDVLFSTSGLGFQWSPQENCFHPGGLFASVGQAGMGFGISPNSHDNGSKPPFANMYTKY 71

Query: 65  MSLPEPSFRIDRIPQLALGEVLEAGEKVVKKEV-----GFKMRIKIGNPSLRKLISGAVA 119
             + E  ++I  +P+L +GE+ E  E++VKK+        K++IKIGNPSLR+LISGA+A
Sbjct: 72  ALVQESGYKIVEVPELGVGEIAE--EEIVKKKKKKKRGAVKLKIKIGNPSLRRLISGAIA 129

Query: 120 GAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAI 179
           G VSRTAVAPLETIRTHLMVGSCGNS+GEVF  I+K+DGWKGLFRGNFVNVIRVAPSKAI
Sbjct: 130 GGVSRTAVAPLETIRTHLMVGSCGNSTGEVFQNIMKNDGWKGLFRGNFVNVIRVAPSKAI 189

Query: 180 ELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRGVYK 239
           ELFAYDTVKKHL P PGE+PKLP PAS IAGA+AG SSTLC YPLELLKTR+T+QRGVYK
Sbjct: 190 ELFAYDTVKKHLTPNPGEQPKLPFPASPIAGAIAGVSSTLCMYPLELLKTRLTVQRGVYK 249

Query: 240 NLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIV 299
           NLLDAFLTI+R+EGPAELYRGLT SLIGV+PYAATNYFAYDTLR++YKKAF +EEIGN++
Sbjct: 250 NLLDAFLTIMRDEGPAELYRGLTPSLIGVIPYAATNYFAYDTLRRSYKKAFNQEEIGNMM 309

Query: 300 TLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNMLHALASILEKEGLPGLYKGLG 359
           TLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQN+LHALASILE EGLPGLY+GLG
Sbjct: 310 TLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQYQNVLHALASILETEGLPGLYRGLG 369

Query: 360 PSCIKLVPAAGISFMCYEACKKILIEKEES 389
           PSC+KLVPAAGISFMCYEACK+ILIEKE+ 
Sbjct: 370 PSCMKLVPAAGISFMCYEACKRILIEKEDD 399




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478051|ref|XP_003609311.1| Mitochondrial substrate carrier family protein V [Medicago truncatula] gi|355510366|gb|AES91508.1| Mitochondrial substrate carrier family protein V [Medicago truncatula] Back     alignment and taxonomy information
>gi|255566981|ref|XP_002524473.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223536261|gb|EEF37913.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297738937|emb|CBI28182.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225430247|ref|XP_002285050.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|147772995|emb|CAN73822.1| hypothetical protein VITISV_005135 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565187|ref|XP_003550825.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357466267|ref|XP_003603418.1| Protein brittle-1 [Medicago truncatula] gi|355492466|gb|AES73669.1| Protein brittle-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|255548956|ref|XP_002515534.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223545478|gb|EEF46983.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296082017|emb|CBI21022.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2127851392 SHS1 "AT4G32400" [Arabidopsis 0.734 0.734 0.716 2.7e-107
UNIPROTKB|E2QWQ5 603 SLC25A23 "Uncharacterized prot 0.688 0.447 0.342 3.9e-44
UNIPROTKB|Q9BV35468 SLC25A23 "Calcium-binding mito 0.686 0.574 0.352 3.5e-43
RGD|1588586467 Slc25a23 "solute carrier famil 0.688 0.578 0.342 4.5e-43
MGI|MGI:1914222467 Slc25a23 "solute carrier famil 0.688 0.578 0.342 1.2e-42
UNIPROTKB|Q5PQ27327 slc25a42 "Mitochondrial coenzy 0.711 0.853 0.357 1.5e-42
ZFIN|ZDB-GENE-060825-313326 slc25a42 "solute carrier famil 0.727 0.874 0.353 4e-42
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.696 0.629 0.358 8.4e-42
ZFIN|ZDB-GENE-040724-220481 si:dkey-204f11.59 "si:dkey-204 0.693 0.565 0.341 1.7e-41
UNIPROTKB|Q05AQ3327 slc25a42 "Mitochondrial coenzy 0.711 0.853 0.350 2.2e-41
TAIR|locus:2127851 SHS1 "AT4G32400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
 Identities = 207/289 (71%), Positives = 237/289 (82%)

Query:   101 MRIKIGNPSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSGEVFDAILKSDGWK 160
             ++IKI NPSLR+L+SGAVAGAVSRT VAPLETIRTHLMVGS GNSS EVF  I+K +GW 
Sbjct:   102 LKIKIANPSLRRLLSGAVAGAVSRTVVAPLETIRTHLMVGSGGNSSTEVFSDIMKHEGWT 161

Query:   161 GLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLC 220
             GLFRGN VNVIRVAP++A+ELF ++TV K L+P  G+E K+PIPAS +AGA AG S TL 
Sbjct:   162 GLFRGNLVNVIRVAPARAVELFVFETVNKKLSPPHGQESKIPIPASLLAGACAGVSQTLL 221

Query:   221 TYPLELLKTRVTIQRGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYAATNYFAYD 280
             TYPLEL+KTR+TIQRGVYK + DAFL I+REEGP ELYRGL  SLIGVVPYAATNYFAYD
Sbjct:   222 TYPLELVKTRLTIQRGVYKGIFDAFLKIIREEGPTELYRGLAPSLIGVVPYAATNYFAYD 281

Query:   281 TLRKAYKKAFTKEEIGNIVTLLXXXXXXXXXXXXTFPLEVARKHMQAGALNGRQ-YQNML 339
             +LRKAY+    +E+IGNI TLL            TFPLEVARKHMQ GA++GR  Y+NML
Sbjct:   282 SLRKAYRSFSKQEKIGNIETLLIGSLAGALSSTATFPLEVARKHMQVGAVSGRVVYKNML 341

Query:   340 HALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKEE 388
             HAL +ILE EG+ G YKGLGPSC+KLVPAAGISFMCYEACKKILIE  +
Sbjct:   342 HALVTILEHEGILGWYKGLGPSCLKLVPAAGISFMCYEACKKILIENNQ 390




GO:0005215 "transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0009793 "embryo development ending in seed dormancy" evidence=NAS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009536 "plastid" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0006862 "nucleotide transport" evidence=IGI;RCA
GO:0015215 "nucleotide transmembrane transporter activity" evidence=IGI
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006820 "anion transport" evidence=RCA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0015696 "ammonium transport" evidence=RCA
GO:0015802 "basic amino acid transport" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0043090 "amino acid import" evidence=RCA
GO:0043269 "regulation of ion transport" evidence=RCA
UNIPROTKB|E2QWQ5 SLC25A23 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BV35 SLC25A23 "Calcium-binding mitochondrial carrier protein SCaMC-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1588586 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914222 Slc25a23 "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060825-313 slc25a42 "solute carrier family 25, member 42" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040724-220 si:dkey-204f11.59 "si:dkey-204f11.59" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SUV1BRT1_ARATHNo assigned EC number0.74740.73460.7346yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00016874001
SubName- Full=Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence); (400 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-25
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-23
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-21
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-12
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 3e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-07
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 7e-05
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 99.2 bits (248), Expect = 1e-25
 Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 293 EEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNG-RQYQNMLHALASILEKEGL 351
             +  + +LL G  AGAI+++ T+PL+V +  +Q+ A  G R+Y+ +L     I ++EG+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 352 PGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEK 386
            GLYKGL P+ +++ PAA I F  YE  KK+L++K
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKK 95


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.97
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.95
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.92
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.92
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.91
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.89
KOG2745321 consensus Mitochondrial carrier protein [General f 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG2954427 consensus Mitochondrial carrier protein [General f 99.71
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.66
KOG2745321 consensus Mitochondrial carrier protein [General f 99.56
KOG1519297 consensus Predicted mitochondrial carrier protein 99.5
KOG2954427 consensus Mitochondrial carrier protein [General f 98.55
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=5.6e-60  Score=437.58  Aligned_cols=279  Identities=42%  Similarity=0.709  Sum_probs=252.2

Q ss_pred             chHHHHHHHHHHHHHHHHhhccHHHHHhHhhcCCC------CCChHHHHHHHHHhhCcccccccchHHHHhHHHHHHHHH
Q 016306          108 PSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSC------GNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAIEL  181 (392)
Q Consensus       108 ~~~~~~~aG~~ag~~~~~~~~Pld~iktr~Q~~~~------~~s~~~~~~~i~~~eG~~glyrG~~~~~l~~~~~~~i~f  181 (392)
                      ..++.++||++||+++.+++.|||++|+|+|++..      .++..+.+++|+++||++|||||+.+++++.+|+.+++|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf  105 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQF  105 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhh
Confidence            55789999999999999999999999999999862      247889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCcchhhhhhhhHHHHHhhhccchhhhHHHHhhcCC--CCCCHHHHHHHHHHhcCcccccc
Q 016306          182 FAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRG--VYKNLLDAFLTIVREEGPAELYR  259 (392)
Q Consensus       182 ~~y~~~k~~l~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~iKtr~q~~~~--~~~~~~~~~~~i~~~eG~~glyr  259 (392)
                      .+||.+++......... ..+...+++||++||+++++++||+|++|||+.+|..  .|+++.+++++|+++||++||||
T Consensus       106 ~aye~~k~~~~~~~~~~-~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYr  184 (320)
T KOG0752|consen  106 SAYEQYKKLVLGVDPNG-SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYR  184 (320)
T ss_pred             hHHHHhhhhhhccCccc-ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhc
Confidence            99999998543332222 5677889999999999999999999999999988876  59999999999999999999999


Q ss_pred             chhhhhhchhhhHHHHHHHHHHHHH-HHHhhhccccchhHHHHHHhhhhhHHHhhccChHHHHHHHHHcCccC----CCC
Q 016306          260 GLTSSLIGVVPYAATNYFAYDTLRK-AYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALN----GRQ  334 (392)
Q Consensus       260 G~~~~ll~~~~~~~~~f~~ye~lk~-~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~Pldvvktr~q~~~~~----~~~  334 (392)
                      |+.|++++.+|+.++.|.+||.+|+ .+......++.+.+..++||++||+++++++||||+||+|||+.+..    ...
T Consensus       185 Gl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~  264 (320)
T KOG0752|consen  185 GLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFR  264 (320)
T ss_pred             CcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccc
Confidence            9999999999999999999999999 55554444667788999999999999999999999999999998753    223


Q ss_pred             CCcHHHHHHHHHHhcCccccccchHHHHhhHhhhHHHHHHHHHHHHHHHhhhh
Q 016306          335 YQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIEKE  387 (392)
Q Consensus       335 y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~f~~ye~~k~~l~~~~  387 (392)
                      |++++||+++|+++||+.|||||+.|++++.+|..+++|.+||.+|.++....
T Consensus       265 ~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~  317 (320)
T KOG0752|consen  265 YKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLK  317 (320)
T ss_pred             cccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhccc
Confidence            68999999999999999999999999999999999999999999998877554



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 8e-16
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-14
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-14
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 28/296 (9%) Query: 110 LRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNS-SGE-----VFDAIL---KSDGWK 160 L+ ++G VA A+S+TAVAP+E ++ L V S E + D ++ K G+ Sbjct: 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67 Query: 161 GLFRGNFVNVIRVAPSKAIELFAYDTVKK-HLAPKPGEEPKLPIPASSIAGAVAGFSSTL 219 +RGN NVIR P++A+ D K+ L + A ++A A +++L Sbjct: 68 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 127 Query: 220 C-TYPLELLKTRVTIQRGV------YKNLLDAFLTIVREEGPAELYRGLTSSLIGVVPYA 272 C YPL+ +TR+ G + L + I + +G LY+G S+ G++ Y Sbjct: 128 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYR 187 Query: 273 ATNYFAYDTLRKAYKKAFTKEEIGNIVTLLXXXXXXXXXXXXTFPLEVARKHMQAGALNG 332 A + YDT + + + IV+ + ++P + R+ M +G Sbjct: 188 AAYFGVYDTAKGMLPDP---KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM--MQSG 242 Query: 333 RQ-----YQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKIL 383 R+ Y + I + EG +KG + ++ + A + + Y+ KK + Sbjct: 243 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFV-LVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-101
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-49
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-18
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-46
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-15
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  299 bits (769), Expect = e-101
 Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 24/296 (8%)

Query: 108 PSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCG---------NSSGEVFDAILKSDG 158
             L+  ++G VA A+S+TAVAP+E ++  L V                 +    I K  G
Sbjct: 6   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 65

Query: 159 WKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPK--LPIPASSIAGAVAGFS 216
           +   +RGN  NVIR  P++A+     D  K+          +       +  +G  AG +
Sbjct: 66  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 125

Query: 217 STLCTYPLELLKTRVTIQRG------VYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVP 270
           S    YPL+  +TR+    G       +  L +    I + +G   LY+G   S+ G++ 
Sbjct: 126 SLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIII 185

Query: 271 YAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGAL 330
           Y A  +  YDT +         + +  IV+ +I     A++   ++P +  R+ M   + 
Sbjct: 186 YRAAYFGVYDTAKGMLPD---PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 242

Query: 331 ---NGRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKIL 383
                  Y   +     I + EG    +KG   + ++ +  A    + Y+  KK +
Sbjct: 243 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA-FVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.2e-55  Score=419.44  Aligned_cols=268  Identities=22%  Similarity=0.348  Sum_probs=244.1

Q ss_pred             HHHHHHHHHHHHHHhhccHHHHHhHhhcCCC------------CCChHHHHHHHHHhhCcccccccchHHHHhHHHHHHH
Q 016306          112 KLISGAVAGAVSRTAVAPLETIRTHLMVGSC------------GNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKAI  179 (392)
Q Consensus       112 ~~~aG~~ag~~~~~~~~Pld~iktr~Q~~~~------------~~s~~~~~~~i~~~eG~~glyrG~~~~~l~~~~~~~i  179 (392)
                      ++++|++|++++.++++|||+||+|+|++..            +.+..+++++|+++||+++||||+.+++++.++..++
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i   83 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV   83 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999753            4588999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcchhhhhhhhHHHHHhhhccchhhhHHHHhhcCC-----CCCCHHHHHHHHHHhcCc
Q 016306          180 ELFAYDTVKKHLAPKPGEEPKLPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRG-----VYKNLLDAFLTIVREEGP  254 (392)
Q Consensus       180 ~f~~y~~~k~~l~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~Pld~iKtr~q~~~~-----~~~~~~~~~~~i~~~eG~  254 (392)
                      +|.+||.+|+.+.+..+   ..+....+++|++||+++.++++|+|+||+|+|++..     .|.++++++++|+++||+
T Consensus        84 ~f~~ye~~k~~~~~~~~---~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~  160 (303)
T 2lck_A           84 RIGLYDSVKQFYTKGSE---HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGI  160 (303)
T ss_dssp             TTTHHHHHHHHHSCCCS---SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHhcCCc---CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcCh
Confidence            99999999999875422   3466778999999999999999999999999999863     689999999999999999


Q ss_pred             cccccchhhhhhchhhhHHHHHHHHHHHHHHHHhhhccccchhHHHHHHhhhhhHHHhhccChHHHHHHHHHcCccCCCC
Q 016306          255 AELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGALNGRQ  334 (392)
Q Consensus       255 ~glyrG~~~~ll~~~~~~~~~f~~ye~lk~~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~Pldvvktr~q~~~~~~~~  334 (392)
                      +|||||+.+++++.+|+.+++|.+||.+|+.+.+... ...+....+++|++||++++++++|+|+||+|||.+..  ..
T Consensus       161 ~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~--~~  237 (303)
T 2lck_A          161 RGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL--GQ  237 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS--SS
T ss_pred             hhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc--cc
Confidence            9999999999999999999999999999998765322 23445678999999999999999999999999999753  35


Q ss_pred             CCcHHHHHHHHHHhcCccccccchHHHHhhHhhhHHHHHHHHHHHHHHHhh
Q 016306          335 YQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEACKKILIE  385 (392)
Q Consensus       335 y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~f~~ye~~k~~l~~  385 (392)
                      |.++++|+++|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+
T Consensus       238 y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          238 YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             CCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             cCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987654



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 392
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-35
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-19
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  129 bits (325), Expect = 2e-35
 Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 24/290 (8%)

Query: 108 PSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSCGNSSG---------EVFDAILKSDG 158
             L+  ++G VA A+S+TAVAP+E ++  L V                 +    I K  G
Sbjct: 5   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 64

Query: 159 WKGLFRGNFVNVIRVAPSKAIELFAYDTVKKHLAPKPGEEPK--LPIPASSIAGAVAGFS 216
           +   +RGN  NVIR  P++A+     D  K+          +       +  +G  AG +
Sbjct: 65  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124

Query: 217 STLCTYPLELLKTRVTIQ------RGVYKNLLDAFLTIVREEGPAELYRGLTSSLIGVVP 270
           S    YPL+  +TR+         +  +  L +    I + +G   LY+G   S+ G++ 
Sbjct: 125 SLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIII 184

Query: 271 YAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGAL 330
           Y A  +  YDT +              IV+ +I     A++   ++P +  R+ M   + 
Sbjct: 185 YRAAYFGVYDTAKGMLPDPKNVH---IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 241

Query: 331 N---GRQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYE 377
                  Y   +     I + EG    +KG   + ++ +  A    + Y+
Sbjct: 242 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA-FVLVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=9.9e-50  Score=374.06  Aligned_cols=268  Identities=24%  Similarity=0.422  Sum_probs=236.6

Q ss_pred             chHHHHHHHHHHHHHHHHhhccHHHHHhHhhcCCC---------CCChHHHHHHHHHhhCcccccccchHHHHhHHHHHH
Q 016306          108 PSLRKLISGAVAGAVSRTAVAPLETIRTHLMVGSC---------GNSSGEVFDAILKSDGWKGLFRGNFVNVIRVAPSKA  178 (392)
Q Consensus       108 ~~~~~~~aG~~ag~~~~~~~~Pld~iktr~Q~~~~---------~~s~~~~~~~i~~~eG~~glyrG~~~~~l~~~~~~~  178 (392)
                      +++.+++||++|++++.+++||||+||||+|++..         .++..+++++++++||+++||||+.+.+++..+...
T Consensus         5 ~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~   84 (292)
T d1okca_           5 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQA   84 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccc
Confidence            45789999999999999999999999999998643         357899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCC--CCcchhhhhhhhHHHHHhhhccchhhhHHHHhhcCC------CCCCHHHHHHHHHH
Q 016306          179 IELFAYDTVKKHLAPKPGEEPK--LPIPASSIAGAVAGFSSTLCTYPLELLKTRVTIQRG------VYKNLLDAFLTIVR  250 (392)
Q Consensus       179 i~f~~y~~~k~~l~~~~~~~~~--~~~~~~~~ag~~ag~~~~~v~~Pld~iKtr~q~~~~------~~~~~~~~~~~i~~  250 (392)
                      ++|.+|+.+++.+.........  ......+++|++|++++.++++|+|++|+|+|.+..      .|.+..+.++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (292)
T d1okca_          85 LNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFK  164 (292)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhh
Confidence            9999999999988765433222  123456789999999999999999999999998753      57889999999999


Q ss_pred             hcCccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhhhccccchhHHHHHHhhhhhHHHhhccChHHHHHHHHHcCcc
Q 016306          251 EEGPAELYRGLTSSLIGVVPYAATNYFAYDTLRKAYKKAFTKEEIGNIVTLLIGSAAGAISSSATFPLEVARKHMQAGAL  330 (392)
Q Consensus       251 ~eG~~glyrG~~~~ll~~~~~~~~~f~~ye~lk~~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~Pldvvktr~q~~~~  330 (392)
                      +||+++||+|+.+++++++++.+++|.+||.+|+.+.+   .........+++++++++++++++||+||||+|||.+..
T Consensus       165 ~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~  241 (292)
T d1okca_         165 SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD---PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG  241 (292)
T ss_dssp             HHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG---GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             ccchhhhhccccccccceehHhhhhhhhccchhhhccc---ccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999986643   333456778899999999999999999999999999864


Q ss_pred             CC---CCCCcHHHHHHHHHHhcCccccccchHHHHhhHhhhHHHHHHHHHHH
Q 016306          331 NG---RQYQNMLHALASILEKEGLPGLYKGLGPSCIKLVPAAGISFMCYEAC  379 (392)
Q Consensus       331 ~~---~~y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~f~~ye~~  379 (392)
                      ..   ..|.++++|+++|+++||++|||||+.++++|.+| .+++|.+||.+
T Consensus       242 ~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         242 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             CCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            33   24899999999999999999999999999999876 57899999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure