Citrus Sinensis ID: 016315
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 391 | ||||||
| 359493020 | 562 | PREDICTED: histidinol dehydrogenase, chl | 0.920 | 0.640 | 0.802 | 1e-171 | |
| 296088118 | 546 | unnamed protein product [Vitis vinifera] | 0.920 | 0.659 | 0.802 | 1e-171 | |
| 255564978 | 479 | histidinol dehydrogenase, putative [Rici | 0.966 | 0.789 | 0.764 | 1e-169 | |
| 224061605 | 441 | predicted protein [Populus trichocarpa] | 0.867 | 0.768 | 0.839 | 1e-168 | |
| 224122154 | 441 | predicted protein [Populus trichocarpa] | 0.808 | 0.716 | 0.898 | 1e-167 | |
| 449435520 | 490 | PREDICTED: histidinol dehydrogenase, chl | 0.974 | 0.777 | 0.730 | 1e-161 | |
| 449488538 | 490 | PREDICTED: histidinol dehydrogenase, chl | 0.974 | 0.777 | 0.730 | 1e-160 | |
| 326530228 | 475 | predicted protein [Hordeum vulgare subsp | 0.872 | 0.717 | 0.791 | 1e-159 | |
| 388513273 | 474 | unknown [Lotus japonicus] | 0.897 | 0.740 | 0.766 | 1e-158 | |
| 356555910 | 471 | PREDICTED: histidinol dehydrogenase, chl | 0.872 | 0.723 | 0.785 | 1e-158 |
| >gi|359493020|ref|XP_002264907.2| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/364 (80%), Positives = 323/364 (88%), Gaps = 4/364 (1%)
Query: 3 DTQLLFFNRSHIFIKPLQNRRFGFT----RVQKYNQFFSSGLIHKRIQCSMKSYRLSELT 58
D QL+ FNRS+ K Q+ +F + + + + G H+ I CSMKSYRLSEL+
Sbjct: 75 DIQLVSFNRSNFLTKLWQSHQFRVIGTPQNIYRGSCYLREGSTHRSISCSMKSYRLSELS 134
Query: 59 HAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELP 118
AEV SLKARPRIDFSSIF++VHPIVDDVR+RGDA+VKDYT RFDKV+L++++ENV+ELP
Sbjct: 135 QAEVNSLKARPRIDFSSIFNVVHPIVDDVRSRGDAAVKDYTTRFDKVELDRLIENVAELP 194
Query: 119 DPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTA 178
DPELDA +KEAFDVAY+NI+AFH AQKSAE VENMKGV+CKRVARSI SVGLYVPGGTA
Sbjct: 195 DPELDAGIKEAFDVAYDNIFAFHAAQKSAEKIVENMKGVKCKRVARSIASVGLYVPGGTA 254
Query: 179 VLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISA 238
VLPSTALMLSVPAQIAGCKTVVLATPPSQDG ICKEVLYCAKKAGVTHILKAGGAQAI+A
Sbjct: 255 VLPSTALMLSVPAQIAGCKTVVLATPPSQDGGICKEVLYCAKKAGVTHILKAGGAQAIAA 314
Query: 239 MAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 298
MAWGT SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVIAD +A+PVHI
Sbjct: 315 MAWGTTSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKHANPVHI 374
Query: 299 AADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFAR 358
AADLLSQAEHGPDSQVVLVI GDGVDL AIE+EISKQCQSLPRGEFASKAL HSF VFAR
Sbjct: 375 AADLLSQAEHGPDSQVVLVIAGDGVDLRAIEEEISKQCQSLPRGEFASKALSHSFTVFAR 434
Query: 359 DMLE 362
+M+E
Sbjct: 435 NMVE 438
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088118|emb|CBI35507.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255564978|ref|XP_002523482.1| histidinol dehydrogenase, putative [Ricinus communis] gi|223537310|gb|EEF38941.1| histidinol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224061605|ref|XP_002300563.1| predicted protein [Populus trichocarpa] gi|222847821|gb|EEE85368.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224122154|ref|XP_002330554.1| predicted protein [Populus trichocarpa] gi|222872112|gb|EEF09243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449435520|ref|XP_004135543.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449488538|ref|XP_004158076.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|326530228|dbj|BAJ97540.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
| >gi|388513273|gb|AFK44698.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|356555910|ref|XP_003546272.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 391 | ||||||
| TAIR|locus:2163946 | 466 | HDH "histidinol dehydrogenase" | 0.867 | 0.727 | 0.763 | 1.1e-135 | |
| UNIPROTKB|G4MYK1 | 865 | MGG_01309 "Histidine biosynthe | 0.859 | 0.388 | 0.457 | 2.9e-71 | |
| ASPGD|ASPL0000057819 | 867 | AN0797 [Emericella nidulans (t | 0.774 | 0.349 | 0.501 | 7e-70 | |
| POMBASE|SPBC1711.13 | 439 | his2 "histidinol dehydrogenase | 0.792 | 0.706 | 0.476 | 1.8e-69 | |
| SGD|S000000535 | 799 | HIS4 "Multifunctional enzyme c | 0.774 | 0.379 | 0.487 | 3e-69 | |
| CGD|CAL0000622 | 838 | HIS4 [Candida albicans (taxid: | 0.836 | 0.390 | 0.438 | 3.2e-65 | |
| UNIPROTKB|Q59UT2 | 838 | HIS4 "Putative uncharacterized | 0.836 | 0.390 | 0.438 | 3.2e-65 | |
| UNIPROTKB|Q9F854 | 431 | hisD "Histidinol dehydrogenase | 0.790 | 0.716 | 0.457 | 1.6e-63 | |
| TIGR_CMR|VC_1133 | 431 | VC_1133 "histidinol dehydrogen | 0.790 | 0.716 | 0.457 | 1.6e-63 | |
| UNIPROTKB|P06988 | 434 | hisD "HisD" [Escherichia coli | 0.774 | 0.698 | 0.463 | 3.3e-63 |
| TAIR|locus:2163946 HDH "histidinol dehydrogenase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 262/343 (76%), Positives = 300/343 (87%)
Query: 47 CSMKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVK 106
CSMKSYRLSEL+ ++V SLK+RPRIDFSSIF+ V+PI+D VR+ GD +VK+YTERFDKV+
Sbjct: 30 CSMKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQ 89
Query: 107 LEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSI 166
L KVVE++SEL PELD+ VKEAFDVAY+NIYAFHLAQKS E SVENMKGVRCKRV+RSI
Sbjct: 90 LNKVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSI 149
Query: 167 GSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH 226
GSVGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPPS+DGSICKEVLYCAK+AGVTH
Sbjct: 150 GSVGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTH 209
Query: 227 ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVL 286
ILKAGGAQAI+AMAWGT+SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVL
Sbjct: 210 ILKAGGAQAIAAMAWGTDSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVL 269
Query: 287 VIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXXAIEQEISKQCQSLPRGEFAS 346
VIAD +ASPV+IAADLLSQAEHGPDSQ AIE+EI+KQC+SLPRGEFAS
Sbjct: 270 VIADEHASPVYIAADLLSQAEHGPDSQVVLVVVGDSVDLNAIEEEIAKQCKSLPRGEFAS 329
Query: 347 KALGHSFMVFARDMLEV---SQEF-PSFVLSNLDEVDQQSSML 385
KAL HSF VFARDM+E S + P ++ N+ + ++ ++
Sbjct: 330 KALSHSFTVFARDMIEAISFSNLYAPEHLIINVKDAEKWEGLI 372
|
|
| UNIPROTKB|G4MYK1 MGG_01309 "Histidine biosynthesis trifunctional protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000057819 AN0797 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPBC1711.13 his2 "histidinol dehydrogenase His2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| SGD|S000000535 HIS4 "Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0000622 HIS4 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q59UT2 HIS4 "Putative uncharacterized protein HIS4" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9F854 hisD "Histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_1133 VC_1133 "histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P06988 hisD "HisD" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00013048 | histidinol dehydrogenase (EC-1.1.1.23); Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (By similarity) (441 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.X.5883.1 | • | • | • | • | • | • | 0.993 | ||||
| gw1.41.216.1 | • | • | • | • | • | • | • | 0.991 | |||
| gw1.5422.9.1 | • | • | • | • | • | 0.984 | |||||
| estExt_fgenesh4_pm.C_1460004 | • | • | • | • | • | 0.981 | |||||
| eugene3.100000001 | • | • | • | • | • | 0.981 | |||||
| gw1.XIX.1604.1 | • | • | • | • | • | 0.951 | |||||
| gw1.86.12.1 | • | • | • | • | • | 0.950 | |||||
| gw1.VIII.669.1 | • | • | • | • | 0.923 | ||||||
| fgenesh4_pg.C_scaffold_803000002 | • | 0.899 | |||||||||
| eugene3.00050974 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 391 | |||
| PLN02926 | 431 | PLN02926, PLN02926, histidinol dehydrogenase | 0.0 | |
| pfam00815 | 413 | pfam00815, Histidinol_dh, Histidinol dehydrogenase | 1e-147 | |
| cd06572 | 390 | cd06572, Histidinol_dh, Histidinol dehydrogenase, | 1e-142 | |
| PRK00877 | 425 | PRK00877, hisD, bifunctional histidinal dehydrogen | 1e-132 | |
| TIGR00069 | 393 | TIGR00069, hisD, histidinol dehydrogenase | 1e-126 | |
| COG0141 | 425 | COG0141, HisD, Histidinol dehydrogenase [Amino aci | 1e-123 | |
| PRK12447 | 426 | PRK12447, PRK12447, histidinol dehydrogenase; Revi | 3e-75 | |
| PRK13770 | 416 | PRK13770, PRK13770, histidinol dehydrogenase; Prov | 2e-56 | |
| PRK13769 | 368 | PRK13769, PRK13769, histidinol dehydrogenase; Prov | 5e-24 |
| >gnl|CDD|215500 PLN02926, PLN02926, histidinol dehydrogenase | Back alignment and domain information |
|---|
Score = 597 bits (1541), Expect = 0.0
Identities = 264/317 (83%), Positives = 289/317 (91%), Gaps = 2/317 (0%)
Query: 47 CSMKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVK 106
CSMKSYRLSEL+ +EV SLKARPRIDFSSI V+PIV++VR+RGDA+VK+YT +FDKV
Sbjct: 1 CSMKSYRLSELSASEVDSLKARPRIDFSSILETVNPIVENVRSRGDAAVKEYTSKFDKVA 60
Query: 107 LEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSVENMKGVRCKRVARS 165
L+ VVE VS+LPDP LDA VKEAFDVAY+NIYAFHLAQKS E VE M GVRC+RVAR
Sbjct: 61 LDSVVERVSDLPDPVLDADVKEAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARP 120
Query: 166 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 225
IG+VGLYVPGGTAVLPSTALML+VPAQIAGCKTVVLATPP +DGSIC EVLYCAKKAGVT
Sbjct: 121 IGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVT 180
Query: 226 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 285
HILKAGGAQAI+AMAWGT+SCPKV+KIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEV
Sbjct: 181 HILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEV 240
Query: 286 LVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFA 345
LVIAD A+PVH+AADLLSQAEHGPDSQVVLV VGD VDLDAIE+E+ KQCQSLPRGE A
Sbjct: 241 LVIADKTANPVHVAADLLSQAEHGPDSQVVLVAVGD-VDLDAIEEEVEKQCQSLPRGEIA 299
Query: 346 SKALGHSFMVFARDMLE 362
SKALGHSF+V ARDM E
Sbjct: 300 SKALGHSFIVVARDMAE 316
|
Length = 431 |
| >gnl|CDD|216133 pfam00815, Histidinol_dh, Histidinol dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|119329 cd06572, Histidinol_dh, Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
| >gnl|CDD|234853 PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232808 TIGR00069, hisD, histidinol dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|223219 COG0141, HisD, Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237103 PRK12447, PRK12447, histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|172308 PRK13770, PRK13770, histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172307 PRK13769, PRK13769, histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 391 | |||
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 100.0 | |
| PLN02926 | 431 | histidinol dehydrogenase | 100.0 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 100.0 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 100.0 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 100.0 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 100.0 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 100.0 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 100.0 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 100.0 | |
| KOG2697 | 446 | consensus Histidinol dehydrogenase [Amino acid tra | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 94.87 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 91.49 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 90.17 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 90.01 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 89.18 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 88.01 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 87.61 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 87.51 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 87.32 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 87.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 85.36 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 85.27 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 85.17 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 85.08 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 84.73 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 84.69 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 84.61 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 84.12 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 84.08 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 83.13 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 81.15 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 80.15 |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-125 Score=955.02 Aligned_cols=321 Identities=45% Similarity=0.673 Sum_probs=305.0
Q ss_pred EcCCCCHHHHHHHhcCCC-CChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHH
Q 016315 53 RLSELTHAEVQSLKARPR-IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEA 129 (391)
Q Consensus 53 ~~~~~~~~~~~~~l~R~~-~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~~A 129 (391)
++......++...+.|+. .+.+++.+.|++||++||++||+||++||+|||++++++|+||++||++| .+|+++++|
T Consensus 5 ~~~~~~~~~~~~~l~r~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~a 84 (425)
T PRK00877 5 RWLSLSDAEFRAALPRRAREDDEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREA 84 (425)
T ss_pred eccccChHHHHHHhcCccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHH
Confidence 333445556666666655 45778999999999999999999999999999999988999999999998 899999999
Q ss_pred HHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCCCC
Q 016315 130 FDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDG 209 (391)
Q Consensus 130 i~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~~G 209 (391)
|+.|++||++||++|+|++|..+..+|+++||+|+||+|||||||||+|+|||||||++||||||||++|||||||. +|
T Consensus 85 i~~A~~~I~~Fh~~q~~~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~-~g 163 (425)
T PRK00877 85 LEEAAENIRAFHEAQKPESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPP-DG 163 (425)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCC-CC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999997 99
Q ss_pred CCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEEEe
Q 016315 210 SICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIA 289 (391)
Q Consensus 210 ~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlVIA 289 (391)
++||.+|+||++|||++||++|||||||||||||||||||||||||||+|||+|||++++ .|||||+|||||++|||
T Consensus 164 ~i~p~vL~AA~~~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViA 240 (425)
T PRK00877 164 EINPAILAAAALAGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG---VVGIDMIAGPSEILVIA 240 (425)
T ss_pred CCCHHHHHHHHHcCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC---CcCcCCCCCCceeEEEe
Confidence 999999999999999999999999999999999999999999999999999999998754 49999999999999999
Q ss_pred cCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhC-CeEEEECCHHHHHhccc
Q 016315 290 DIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGH-SFMVFARDMLEVSQEFP 368 (391)
Q Consensus 290 D~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~-g~iivv~sleeAi~~an 368 (391)
|++|||+|||+||||||||||+|++||||||++|+ ++|.++|++||+.|||++|+++||++ |.+++|+|+|||++++|
T Consensus 241 D~~Anp~~vAaDLLaQAEHd~~a~aiLvT~s~~la-~~V~~~v~~ql~~l~r~~ia~~sl~~~g~iivv~~leeai~~~N 319 (425)
T PRK00877 241 DETADPDFVAADLLSQAEHDPDAQSILVTTSEELA-EAVAAEVERQLATLPRAEIARASLEGQGAIILVDDLEEAIELSN 319 (425)
T ss_pred CCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999985 99999999999999999
Q ss_pred hhhhcccccc
Q 016315 369 SFVLSNLDEV 378 (391)
Q Consensus 369 ~~~~~~l~~~ 378 (391)
++|||||+-.
T Consensus 320 ~~APEHLel~ 329 (425)
T PRK00877 320 AYAPEHLEIQ 329 (425)
T ss_pred hhChHheeeh
Confidence 9999999854
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 391 | ||||
| 1kae_A | 434 | L-Histidinol Dehydrogenase (Hisd) Structure Complex | 6e-67 | ||
| 1k75_A | 434 | The L-Histidinol Dehydrogenase (Hisd) Structure Imp | 6e-67 | ||
| 4gic_A | 423 | Crystal Structure Of A Putative Histidinol Dehydrog | 1e-35 |
| >pdb|1KAE|A Chain A, L-Histidinol Dehydrogenase (Hisd) Structure Complexed With L- Histidinol (Substrate), Zinc And Nad (Cofactor) Length = 434 | Back alignment and structure |
|
| >pdb|1K75|A Chain A, The L-Histidinol Dehydrogenase (Hisd) Structure Implicates Domain Swapping And Gene Duplication. Length = 434 | Back alignment and structure |
| >pdb|4GIC|A Chain A, Crystal Structure Of A Putative Histidinol Dehydrogenase (Target Psi- 014034) From Methylococcus Capsulatus Length = 423 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 391 | |||
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 1e-152 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A Length = 434 | Back alignment and structure |
|---|
Score = 435 bits (1122), Expect = e-152
Identities = 144/319 (45%), Positives = 197/319 (61%), Gaps = 9/319 (2%)
Query: 48 SMKS-YRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKV 105
S + + T + + L RP I S SI V+ I+D+V+ RGD ++++Y+ +FDK
Sbjct: 2 SFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKT 61
Query: 106 KLEKVVENVSELPD--PELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVA 163
+ + + E+ L +K+A VA NI FH AQK VE GVRC++V
Sbjct: 62 TVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVT 121
Query: 164 RSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAG 223
R + SVGLY+PGG+A L ST LML+ PA IAGCK VVL +PP I E+LY A+ G
Sbjct: 122 RPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP----IADEILYAAQLCG 177
Query: 224 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPS 283
V + GGAQAI+A+A+GTES PKV+KIFGPGN +VT AK + +IDMPAGPS
Sbjct: 178 VQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPS 237
Query: 284 EVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGE 343
EVLVIAD A+P +A+DLLSQAEHGPDSQV+L+ + + + + +Q LPR E
Sbjct: 238 EVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADM-ARRVAEAVERQLAELPRAE 296
Query: 344 FASKALGHSFMVFARDMLE 362
A +AL S ++ +D+ +
Sbjct: 297 TARQALNASRLIVTKDLAQ 315
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 391 | |||
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 100.0 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 94.33 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 91.47 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 87.46 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 85.33 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 85.15 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 84.89 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 82.17 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 82.14 |
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-125 Score=948.24 Aligned_cols=326 Identities=33% Similarity=0.486 Sum_probs=310.1
Q ss_pred eeeEEEEcCCCCHH-HHHHHhcCCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---ceeeCCCCCCCC--
Q 016315 47 CSMKSYRLSELTHA-EVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE---KVVENVSELPDP-- 120 (391)
Q Consensus 47 ~~m~i~~~~~~~~~-~~~~~l~R~~~~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~---~l~Vs~~ei~~A-- 120 (391)
..|++++..+.+.. ++.+++.|+..+++++.+.|++||++||++||+||++||+|||+++++ .|+||++||++|
T Consensus 5 ~~ik~L~~~~~~f~~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~ 84 (423)
T 4gic_A 5 VKIKRLYTGDADFASQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQ 84 (423)
T ss_dssp CCCEEEETTCTTHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHH
T ss_pred ceeEEecCCCCCHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHh
Confidence 45788888776654 467889998888999999999999999999999999999999999764 599999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEE
Q 016315 121 ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVV 200 (391)
Q Consensus 121 ~l~~~~~~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Iv 200 (391)
.+|+++++||+.|++||++||++|++++|.+++.+|+++||+|+||+|||||||||+|+|||||||++||||||||++||
T Consensus 85 ~l~~~~~~ai~~A~~~I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv 164 (423)
T 4gic_A 85 ALPAEQAKALREAAERIRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELI 164 (423)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCC
Q 016315 201 LATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPA 280 (391)
Q Consensus 201 v~TPP~~~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~A 280 (391)
||||| ++|++||++|+||++|||+|||++|||||||||||||||||||||||||||+|||+|||++++ .|||||+|
T Consensus 165 ~~tPp-~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~A 240 (423)
T 4gic_A 165 MAVPA-PRGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVA 240 (423)
T ss_dssp EECCC-GGGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCC
T ss_pred EecCC-CCCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCccccc
Confidence 99999 589999999999999999999999999999999999999999999999999999999998765 49999999
Q ss_pred CCcEEEEEecCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhh-CCeEEEECC
Q 016315 281 GPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARD 359 (391)
Q Consensus 281 GPSEvlVIAD~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~-~g~iivv~s 359 (391)
|||||+||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.+|+|+|
T Consensus 241 GPSEilViAD~~a~p~~vAaDLlsQAEHd~~a~~iLvT~s~~la-~~V~~~i~~~l~~l~r~~i~~~sl~~~g~ii~v~~ 319 (423)
T 4gic_A 241 GPSEILVISDGRTDPDWIAMDLFSQAEHDEDAQAILISPDAAHL-EAVQASIERLLPGMERAEVIRTSLERRGGMILVDD 319 (423)
T ss_dssp CCCEEEEEECSCSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHGGGCTTHHHHHHHHHHHCEEEECSS
T ss_pred ccceEEEEeCCCCCHHHHHHHHHHhhccCCCCeEEEEeCcHHHH-HHHHHHHHHHHhhCccHHHHHHHHhcCceEEEEee
Confidence 99999999999999999999999999999999999999999998 9999999999999999999999998 699999999
Q ss_pred HHHHHhccchhhhccccc
Q 016315 360 MLEVSQEFPSFVLSNLDE 377 (391)
Q Consensus 360 leeAi~~an~~~~~~l~~ 377 (391)
++||++++|++|||||+-
T Consensus 320 ~~ea~~~~N~~APEHLel 337 (423)
T 4gic_A 320 LEQAAAVANRIAPEHLEL 337 (423)
T ss_dssp HHHHHHHHHHHCCSEEEE
T ss_pred hHHHHHHHHhhChHHhhh
Confidence 999999999999999985
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 391 | ||||
| d1k75a_ | 431 | c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Esc | 5e-58 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} Length = 431 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Score = 192 bits (490), Expect = 5e-58
Identities = 143/322 (44%), Positives = 196/322 (60%), Gaps = 11/322 (3%)
Query: 52 YRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKV 110
+ T + + L RP I S SI V+ I+D+V+ RGD ++++Y+ +FDK + +
Sbjct: 4 IDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTAL 63
Query: 111 VENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 168
+ E+ L +K+A VA NI FH AQK VE GVRC++V R + S
Sbjct: 64 KVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVAS 123
Query: 169 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 228
VGLY+PGG+A L ST LML+ PA IAGCK VVL +PP I Y A+ GV +
Sbjct: 124 VGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEIL----YAAQLCGVQDVF 179
Query: 229 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 288
GGAQAI+A+A+GTES PKV+KIFGPGN +VT AK + +IDMPAGPSEVLVI
Sbjct: 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVI 239
Query: 289 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 348
AD A+P +A+DLLSQAEHGPDSQV+L+ + + + +Q LPR E A +A
Sbjct: 240 ADSGATPDFVASDLLSQAEHGPDSQVILLTP-AADMARRVAEAVERQLAELPRAETARQA 298
Query: 349 LGHSFMVFARDM---LEVSQEF 367
L S ++ +D+ +E+S ++
Sbjct: 299 LNASRLIVTKDLAQCVEISNQY 320
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 391 | |||
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 89.41 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 87.96 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 80.41 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.2e-122 Score=930.45 Aligned_cols=322 Identities=44% Similarity=0.695 Sum_probs=310.0
Q ss_pred EEEcCCCCHHHHHHHhcCCCC-ChhhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHH
Q 016315 51 SYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVK 127 (391)
Q Consensus 51 i~~~~~~~~~~~~~~l~R~~~-~~~~v~~~V~~Il~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~ei~~A--~l~~~~~ 127 (391)
|++|++++.+++.+++.|+.. .++++.+.|++||++||++||+||++||+|||++++++|+||++||++| .+|++++
T Consensus 3 ii~~~~l~~~e~~~ll~R~~~~~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~ 82 (431)
T d1k75a_ 3 IIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELK 82 (431)
T ss_dssp EEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHH
T ss_pred eeehhhCCHHHHHHHcCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHH
Confidence 789999999999999999765 4678999999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhccceeecCCCeEEEEcCCCC
Q 016315 128 EAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ 207 (391)
Q Consensus 128 ~Ai~~A~~nI~~FH~~Q~~~~~~~~~~~Gv~~Gqr~~PierVGlYVPGG~a~ypSTvLM~aIPAkVAGV~~Ivv~TPP~~ 207 (391)
+||+.|++||++||++|++++|.+++.+|+.+|++|+||+|||||||||+|||||||||++|||||||||+|||||||+
T Consensus 83 ~AI~~A~~rI~~FH~~Q~~~~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~- 161 (431)
T d1k75a_ 83 QAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP- 161 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSS-
T ss_pred HHHHHHHHHHHHHHHhhcCCCceeeccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCHHHHHHHHHcCCcchhhcchHHHHHHHhhCCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCcEEEE
Q 016315 208 DGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLV 287 (391)
Q Consensus 208 ~G~i~p~iLaAA~laGv~eIy~vGGAQAIAAlAYGTetIpkVDkIvGPGN~YVt~AKr~v~~~~g~VgID~~AGPSEvlV 287 (391)
+||.+|+||++||||+||++|||||||||||||||||||||||||||.||++|||++++..+.|||||+||||||||
T Consensus 162 ---~~~~~l~aa~~~Gv~~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~v 238 (431)
T d1k75a_ 162 ---IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLV 238 (431)
T ss_dssp ---CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEE
T ss_pred ---CcchHHHHHHHcCccceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEEE
Confidence 89999999999999999999999999999999999999999999999999999998744222399999999999999
Q ss_pred EecCCCCHHHHHHHHHhhhccCCCCceEEEecCchHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCeEEEECCHHHHHhcc
Q 016315 288 IADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEVSQEF 367 (391)
Q Consensus 288 IAD~tAnP~~VAaDLLaQAEHdp~a~aiLvT~s~~la~~~V~~ei~~ql~~lpr~~ia~~sl~~g~iivv~sleeAi~~a 367 (391)
|||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.+||++|+++||+++.+++|+|++||++++
T Consensus 239 iAD~~a~p~~iAaDllaQAEH~~~a~~ilvt~~~~l~-~~v~~~i~~~l~~l~r~~i~~~s~~~~~ii~v~~~~ea~~~~ 317 (431)
T d1k75a_ 239 IADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEIS 317 (431)
T ss_dssp EECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHHTCSSCHHHHHHHTTCEEEECSSHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHhccCCcccceeEEEeccHHHH-HHHHHHHHHHhhhchHHHHHHhhhccceEEEecCHHHHHHHH
Confidence 9999999999999999999999999999999999998 999999999999999999999999988899999999999999
Q ss_pred chhhhccccc
Q 016315 368 PSFVLSNLDE 377 (391)
Q Consensus 368 n~~~~~~l~~ 377 (391)
|++|||||+-
T Consensus 318 N~~APEHL~l 327 (431)
T d1k75a_ 318 NQYGPEHLII 327 (431)
T ss_dssp HHHCCSEEEE
T ss_pred HhhhHHHHHH
Confidence 9999999984
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|