Citrus Sinensis ID: 016380

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLGNKISVPELSVRGFVDTVGPSNFNILQN
cHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEcccccccccccEEEEEccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEcccccEEEEEEcccccEEEcccccccccccHHHHHHHHHcccccccEEEEEccEEEEEEEEEEcEEccccccccccccccccccccccccccccccEEEEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEccccccccccEEHHHHcccHHHHHHccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccEEEEEEEEccEEEEEEcccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHccccccEEEEEcccEEEcEEEEEEHcHcHHHHcccHHcccccHHHccccccccccEEEccccEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHccHHHHHHHHHccccccEEEEEEEEccccccccccccccEEcccccccccccccHccc
MLSWLARITMACWRSVRRYVRMnkdnfnyndidisdsdsshqdsllwckdlekhsygdFSFAVVQANEviedhsqvetgrdAFFVgvydghggpeaSRFIRDHLFRHLMRFAreggtiseDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELrslhpddshiVVMKQGVWRIKGLIQVSRSIGdaylkrpefsldpsfprfhlpepirrpvltaepsictralqpndkFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDElkkidkgdrrfyhddITVVVIFIDHallgnkisvpelsvrgfvdtvgpsnfnilqn
MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAaakkrqmgydelkkidkgdrrfyhDDITVVVIFIDHALLGNKISvpelsvrgfvdtvgpsnfnilqn
MLSWLARITMACWRSVRRYVRMNKDNFNYNdidisdsdsshqdsLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVarrllktalnaaakkrQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLGNKISVPELSVRGFVDTVGPSNFNILQN
**SWLARITMACWRSVRRYVRMNKDNFNYNDIDI********DSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLGNKISVPELSVRGFVDTVGPSNF*****
*LSWLARITMACW*************************************LEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRR*C***PVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPR**************AAKKRQMGYDELKKIDKGDRRFYHDDITVVVIF**********************************
MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLGNKISVPELSVRGFVDTVGPSNFNILQN
MLSWLARITMACWRSVR*************************DSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHAL****************DTVGPSN******
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SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLGNKISVPELSVRGFVDTVGPSNFNILQN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query390 2.2.26 [Sep-21-2011]
Q84JD5393 Probable protein phosphat yes no 0.989 0.982 0.715 1e-160
Q7XUC5388 Probable protein phosphat yes no 0.984 0.989 0.689 1e-155
Q6ZHC8387 Probable protein phosphat yes no 0.974 0.981 0.679 1e-153
Q5Z8P0392 Probable protein phosphat no no 0.930 0.926 0.545 1e-118
Q10S32399 Probable protein phosphat no no 0.856 0.837 0.594 1e-117
Q9FKX4385 Probable protein phosphat no no 0.856 0.867 0.589 1e-117
Q9SD12379 Probable protein phosphat no no 0.861 0.886 0.569 1e-116
Q9LHJ9385 Probable protein phosphat no no 0.946 0.958 0.530 1e-113
Q7XCJ7393 Probable protein phosphat no no 0.856 0.849 0.566 1e-112
Q5PNS9400 Probable protein phosphat no no 0.874 0.852 0.555 1e-110
>sp|Q84JD5|P2C68_ARATH Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 Back     alignment and function desciption
 Score =  565 bits (1457), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 281/393 (71%), Positives = 330/393 (83%), Gaps = 7/393 (1%)

Query: 1   MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFS 60
           M SWLAR+ + C R +RRY RMN+D+   +D D     SS  DSLLW ++LE+HS+GDFS
Sbjct: 1   MFSWLARMALFCLRPMRRYGRMNRDD--DDDDDHDGDSSSSGDSLLWSRELERHSFGDFS 58

Query: 61  FAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISE 120
            AVVQANEVIEDHSQVETG  A FVGVYDGHGGPEASR+I DHLF HLMR +RE   ISE
Sbjct: 59  IAVVQANEVIEDHSQVETGNGAVFVGVYDGHGGPEASRYISDHLFSHLMRVSRERSCISE 118

Query: 121 DILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSL 180
           + LR+AFSATE+GFLTLVRRTCG+KP+IAA+GSCCLVGVIWKGTL +ANVGDSRAV+GS+
Sbjct: 119 EALRAAFSATEEGFLTLVRRTCGLKPLIAAVGSCCLVGVIWKGTLLIANVGDSRAVLGSM 178

Query: 181 G----KSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSI 236
           G    +S KIVAEQLT DHNA +EEVRQELRSLHPDDSHIVV+K GVWRIKG+IQVSRSI
Sbjct: 179 GSNNNRSNKIVAEQLTSDHNAALEEVRQELRSLHPDDSHIVVLKHGVWRIKGIIQVSRSI 238

Query: 237 GDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLT 296
           GDAYLKRPEFSLDPSFPRFHL E ++RPVL+AEP + TR LQ +DKF+IFASDGLWE +T
Sbjct: 239 GDAYLKRPEFSLDPSFPRFHLAEELQRPVLSAEPCVYTRVLQTSDKFVIFASDGLWEQMT 298

Query: 297 NQEAVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIF 356
           NQ+AV+IV   PR G+ARRL++ A+  AAKKR+M YD+LKK+++G RRF+HDDITVVVIF
Sbjct: 299 NQQAVEIVNKHPRPGIARRLVRRAITIAAKKREMNYDDLKKVERGVRRFFHDDITVVVIF 358

Query: 357 IDHALLG-NKISVPELSVRGFVDTVGPSNFNIL 388
           ID+ LL   K +VPELS++GF  TVGPS F+I 
Sbjct: 359 IDNELLMVEKATVPELSIKGFSHTVGPSKFSIF 391

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=2 SV=2 Back     alignment and function description
>sp|Q6ZHC8|P2C25_ORYSJ Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1 Back     alignment and function description
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1 Back     alignment and function description
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1 Back     alignment and function description
>sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
225441453390 PREDICTED: probable protein phosphatase 0.976 0.976 0.810 0.0
224139794385 predicted protein [Populus trichocarpa] 0.961 0.974 0.813 0.0
255579741385 protein phosphatase 2c, putative [Ricinu 0.984 0.997 0.799 0.0
147776497398 hypothetical protein VITISV_040860 [Viti 0.966 0.947 0.797 1e-180
449511325390 PREDICTED: probable protein phosphatase 0.974 0.974 0.776 1e-178
449437581390 PREDICTED: probable protein phosphatase 0.974 0.974 0.768 1e-176
224091615373 predicted protein [Populus trichocarpa] 0.884 0.924 0.837 1e-173
356530695385 PREDICTED: probable protein phosphatase 0.979 0.992 0.750 1e-172
356500437385 PREDICTED: LOW QUALITY PROTEIN: probable 0.979 0.992 0.742 1e-169
356572098391 PREDICTED: probable protein phosphatase 0.994 0.992 0.717 1e-167
>gi|225441453|ref|XP_002279599.1| PREDICTED: probable protein phosphatase 2C 43 [Vitis vinifera] gi|297739833|emb|CBI30015.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/390 (81%), Positives = 347/390 (88%), Gaps = 9/390 (2%)

Query: 1   MLSWLARITMACWRSV-RRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDF 59
           M SWLAR+ +ACW  + RRY  M+KD+ N        S S   D+L+WC+DLEKHS+G+F
Sbjct: 1   MFSWLARLALACWGPLARRYAPMSKDDDN--------SGSGANDALIWCRDLEKHSFGEF 52

Query: 60  SFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTIS 119
           SFAVVQANEVIEDHSQVETGRDA FVGVYDGHGGPEASRFI DHLF HLMR ARE GT+S
Sbjct: 53  SFAVVQANEVIEDHSQVETGRDATFVGVYDGHGGPEASRFISDHLFLHLMRLARENGTMS 112

Query: 120 EDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGS 179
           EDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIW+GTLYVAN+GDSRAVIG 
Sbjct: 113 EDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWRGTLYVANLGDSRAVIGC 172

Query: 180 LGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDA 239
           LG+S KI+AEQL+ +HNA MEEVRQELRSLHPDDSHIVVMK GVWRIKG+IQVSRSIGDA
Sbjct: 173 LGRSNKIIAEQLSREHNASMEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDA 232

Query: 240 YLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQE 299
           YLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTR LQPNDKFLIFASDGLWEHLTNQ+
Sbjct: 233 YLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRVLQPNDKFLIFASDGLWEHLTNQQ 292

Query: 300 AVDIVYNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDH 359
           AV+IV+N PRAG+ARRLL TALN AA+KR+M YD+LKK+ KG RRF+HDDITVVVI++DH
Sbjct: 293 AVEIVHNNPRAGIARRLLTTALNEAARKREMRYDDLKKVGKGVRRFFHDDITVVVIYLDH 352

Query: 360 ALLGNKISVPELSVRGFVDTVGPSNFNILQ 389
            +L    SVPELSVRGF+DTVGPSNFN LQ
Sbjct: 353 EVLRKNFSVPELSVRGFIDTVGPSNFNTLQ 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224139794|ref|XP_002323279.1| predicted protein [Populus trichocarpa] gi|222867909|gb|EEF05040.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579741|ref|XP_002530709.1| protein phosphatase 2c, putative [Ricinus communis] gi|223529723|gb|EEF31663.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147776497|emb|CAN71888.1| hypothetical protein VITISV_040860 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449511325|ref|XP_004163926.1| PREDICTED: probable protein phosphatase 2C 68-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449437581|ref|XP_004136570.1| PREDICTED: probable protein phosphatase 2C 68-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224091615|ref|XP_002309303.1| predicted protein [Populus trichocarpa] gi|222855279|gb|EEE92826.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356530695|ref|XP_003533916.1| PREDICTED: probable protein phosphatase 2C 43-like [Glycine max] Back     alignment and taxonomy information
>gi|356500437|ref|XP_003519038.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 43-like [Glycine max] Back     alignment and taxonomy information
>gi|356572098|ref|XP_003554207.1| PREDICTED: probable protein phosphatase 2C 43-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.987 0.979 0.676 2.4e-140
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.848 0.859 0.553 1.3e-98
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.846 0.870 0.544 9.4e-98
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.869 0.880 0.535 3.7e-96
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.848 0.827 0.532 3.4e-93
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.815 0.828 0.529 6.3e-92
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.805 0.826 0.553 7.3e-91
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.841 0.854 0.523 1.2e-90
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.843 0.889 0.505 8.6e-88
TAIR|locus:2180152674 PLL2 "pol-like 2" [Arabidopsis 0.430 0.249 0.333 3.6e-32
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
 Identities = 265/392 (67%), Positives = 312/392 (79%)

Query:     1 MLSWLARITMACWRSVRRYVRMNKDNFNYNXXXXXXXXXXXXXXLLWCKDLEKHSYGDFS 60
             M SWLAR+ + C R +RRY RMN+D+ + +              LLW ++LE+HS+GDFS
Sbjct:     1 MFSWLARMALFCLRPMRRYGRMNRDDDDDDDHDGDSSSSGDS--LLWSRELERHSFGDFS 58

Query:    61 FAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISE 120
              AVVQANEVIEDHSQVETG  A FVGVYDGHGGPEASR+I DHLF HLMR +RE   ISE
Sbjct:    59 IAVVQANEVIEDHSQVETGNGAVFVGVYDGHGGPEASRYISDHLFSHLMRVSRERSCISE 118

Query:   121 DILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSL 180
             + LR+AFSATE+GFLTLVRRTCG+KP+IAA+GSCCLVGVIWKGTL +ANVGDSRAV+GS+
Sbjct:   119 EALRAAFSATEEGFLTLVRRTCGLKPLIAAVGSCCLVGVIWKGTLLIANVGDSRAVLGSM 178

Query:   181 G----KSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSI 236
             G    +S KIVAEQLT DHNA +EEVRQELRSLHPDDSHIVV+K GVWRIKG+IQVSRSI
Sbjct:   179 GSNNNRSNKIVAEQLTSDHNAALEEVRQELRSLHPDDSHIVVLKHGVWRIKGIIQVSRSI 238

Query:   237 GDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLT 296
             GDAYLKRPEFSLDPSFPRFHL E ++RPVL+AEP + TR LQ +DKF+IFASDGLWE +T
Sbjct:   239 GDAYLKRPEFSLDPSFPRFHLAEELQRPVLSAEPCVYTRVLQTSDKFVIFASDGLWEQMT 298

Query:   297 NQEAVDIVYNCPRAGVXXXXXXXXXXXXXXXXQMGYDELKKIDKGDRRFYHDDITVVVIF 356
             NQ+AV+IV   PR G+                +M YD+LKK+++G RRF+HDDITVVVIF
Sbjct:   299 NQQAVEIVNKHPRPGIARRLVRRAITIAAKKREMNYDDLKKVERGVRRFFHDDITVVVIF 358

Query:   357 IDHALLG-NKISVPELSVRGFVDTVGPSNFNI 387
             ID+ LL   K +VPELS++GF  TVGPS F+I
Sbjct:   359 IDNELLMVEKATVPELSIKGFSHTVGPSKFSI 390
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180152 PLL2 "pol-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5MFV5P2C34_ORYSI3, ., 1, ., 3, ., 1, 60.54250.81020.8315N/Ano
Q6ZHC8P2C25_ORYSJ3, ., 1, ., 3, ., 1, 60.67950.97430.9819yesno
Q7XUC5P2C43_ORYSJ3, ., 1, ., 3, ., 1, 60.68970.98460.9896yesno
Q84JD5P2C68_ARATH3, ., 1, ., 3, ., 1, 60.71500.98970.9821yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00025384001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (390 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-59
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-55
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 4e-38
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-23
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-20
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 7e-11
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  191 bits (488), Expect = 6e-59
 Identities = 97/313 (30%), Positives = 135/313 (43%), Gaps = 70/313 (22%)

Query: 56  YGDFSFAVVQANEVIEDHSQVETGR---DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFA 112
           +           +  ED   ++      D    GV+DGHGG  A  F    L   L+   
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 113 REGGTIS----EDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVA 168
            E  T+S    E+ LR AF   ++  L   +     +P  A  G+  +V +I    LYVA
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQD----EPDDARSGTTAVVALIRGNKLYVA 116

Query: 169 NVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKG 228
           NVGDSRAV   L ++G+  A QLT DH    EE R+ +       S          R+ G
Sbjct: 117 NVGDSRAV---LCRNGE--AVQLTKDHKPVNEEERERIEKAGGRVS--------NGRVPG 163

Query: 229 LIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFAS 288
           ++ V+R++GD  LK                     P ++AEP +    L  +D FLI AS
Sbjct: 164 VLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDDFLILAS 202

Query: 289 DGLWEHLTNQEAVDIVYNCPRAG----VARRLLKTALNAAAKKRQMGYDELKKIDKGDRR 344
           DGLW+ L+NQEAVDIV +          A+ L+  AL                     RR
Sbjct: 203 DGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLAL---------------------RR 241

Query: 345 FYHDDITVVVIFI 357
             HD+ITVVV+ +
Sbjct: 242 GSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 390
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.86
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.75
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.71
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.46
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.37
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.29
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=6.4e-73  Score=548.44  Aligned_cols=326  Identities=50%  Similarity=0.810  Sum_probs=297.1

Q ss_pred             ChHHHHHHHHHhhchhhhhhccccCCCCCCCcCCCCCCCCCCCCceeeccCCCCccCccceeeeccCccccccceeee--
Q 016380            1 MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVET--   78 (390)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~w~~~~~~~~~g~~s~~~~~~~~~~ED~~~v~~--   78 (390)
                      |.+..+++.+.|++|..+.......        .+++...+.++++|+++...+..|++++++.++|+.++|+..++.  
T Consensus        17 ~~~~~~~~~~s~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edr   88 (390)
T KOG0700|consen   17 MKSTPMRLKRSCLRPIRRGESSSRS--------GSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDR   88 (390)
T ss_pred             hccccchhhhhccCCCccccccccc--------cccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCc
Confidence            5567789999999998876544321        011112367999999999999999999999999987888877766  


Q ss_pred             -------CCCeEEEEEEcCCChhHHHHHHHHHHHHHHHH------------HHhh--------------------C-CCc
Q 016380           79 -------GRDAFFVGVYDGHGGPEASRFIRDHLFRHLMR------------FARE--------------------G-GTI  118 (390)
Q Consensus        79 -------~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~------------~~~~--------------------~-~~~  118 (390)
                             .+++.|+||||||||+++++|++++|+.++..            +..+                    . ...
T Consensus        89 v~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~  168 (390)
T KOG0700|consen   89 VSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGD  168 (390)
T ss_pred             ceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchh
Confidence                   55899999999999999999999999999983            2222                    1 357


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCc-eeEEecCCCCCC
Q 016380          119 SEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGK-IVAEQLTMDHNA  197 (390)
Q Consensus       119 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~-~~~~~LT~dH~~  197 (390)
                      +.++|.+||.+++++|+..+.+.+...|+.+.+||||+|++++++.|||||+|||||||++..+.+. +.+.|||.||+.
T Consensus       169 v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~  248 (390)
T KOG0700|consen  169 VLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNA  248 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhcc
Confidence            7899999999999999999999999999999999999999999999999999999999999987776 799999999999


Q ss_pred             CCHHHHHHHHhcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEec
Q 016380          198 CMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRAL  277 (390)
Q Consensus       198 ~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L  277 (390)
                      +++.|++||+..||++++++++++  |||+|.|++||||||.+||+++++++|++++|++|.++++|+|+++|+|+.++|
T Consensus       249 ~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL  326 (390)
T KOG0700|consen  249 SNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKL  326 (390)
T ss_pred             ccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEc
Confidence            999999999999999999999998  999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEEcCCCcccCCHHHHHHHHHc-----CChhHHHHHHHHHHHHHHHHhccccchhhh
Q 016380          278 QPNDKFLIFASDGLWEHLTNQEAVDIVYN-----CPRAGVARRLLKTALNAAAKKRQMGYDELK  336 (390)
Q Consensus       278 ~~~D~fLILaSDGLwd~ls~~eiv~iv~~-----~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~  336 (390)
                      +|.|+|||||||||||+|+++|++++|..     .+.+++|++||+.||.+++++++|||++|+
T Consensus       327 ~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~r~s~ll  390 (390)
T KOG0700|consen  327 TPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGMRLSDLL  390 (390)
T ss_pred             CCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccccHhhcC
Confidence            99999999999999999999999999999     789999999999999999999999999874

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-19
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-19
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-15
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-15
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-15
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-14
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-13
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-13
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-13
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-13
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-13
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-13
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-13
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 6e-13
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 6e-13
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 8e-13
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 2e-08
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 2e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 2e-06
2pom_A372 Tab1 With Manganese Ion Length = 372 3e-04
2j4o_A401 Structure Of Tab1 Length = 401 6e-04
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 9e-04
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 148 IAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELR 207
           +A  G+   V  +    L+VAN GDSRA++G   + G   A  L+ DHNA  E   Q L+
Sbjct: 196 VAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLK 255
Query: 208 SLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK------------RPEFSLDPSFPRF 255
             HP +    V+KQ   R+ GL+   R+ GD   K             P+   D  + +F
Sbjct: 256 LEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKF 313
Query: 256 HLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
             P     P LTAEP +    L+P DKFL+ A+DGLWE +  Q+ V IV
Sbjct: 314 IPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 5e-82
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 6e-82
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 9e-07
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-53
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-53
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-52
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-52
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 6e-51
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-50
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-50
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-50
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-49
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 8e-40
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-27
1txo_A237 Putative bacterial enzyme; serine/threonine protei 6e-14
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-12
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 6e-12
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 9e-11
3rnr_A211 Stage II sporulation E family protein; structural 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
 Score =  255 bits (653), Expect = 5e-82
 Identities = 77/378 (20%), Positives = 123/378 (32%), Gaps = 64/378 (16%)

Query: 46  LWCKDLEKHSYGDFSFAVVQ---------ANEVIED-HSQVETGRDAFFVGVYDGHGGPE 95
            W  DL          A  +          +   ED   +  +  + F  GV++G+ G  
Sbjct: 16  SWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNR 75

Query: 96  ASRFIRDHLFRHLMRFAREGGTISEDI---LRSAFSATEDGFLTLVRRTCGIKPVIA--- 149
            + F+   L   L+           D+   L  AF   E  FL  +      K  +    
Sbjct: 76  VTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQL 135

Query: 150 ---------------------------AIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGK 182
                                      + G+  +V V+    LYVANVG +RA++     
Sbjct: 136 PEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTV 195

Query: 183 SGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK 242
            G +   QL +DH    E+    L  L  D   I      V  I G  + +R IGD  +K
Sbjct: 196 DG-LQVTQLNVDHTTENEDELFRLSQLGLDAGKIK----QVGIICGQ-ESTRRIGDYKVK 249

Query: 243 RPEFSLDPSFPRFHLPEPIRRPVLTAEPSI-CTRALQPNDKFLIFASDGLWEHLTNQEAV 301
                +D       L    +   + AEP I   + L     FL+  S+GL++ L      
Sbjct: 250 YGYTDID-------LLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGP 302

Query: 302 DIV----YNCPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFY---HDDITVVV 354
                          A++    A+  A   R            G+R  +   H+D+T++V
Sbjct: 303 GQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLV 362

Query: 355 IFIDHALLGNKISVPELS 372
               + L       P  +
Sbjct: 363 RNFGYPLGEMSQPTPSPA 380
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.79
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.77
3f79_A255 Probable two-component response regulator; adaptor 99.63
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.59
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.08
3eq2_A394 Probable two-component response regulator; adaptor 98.27
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=6.4e-53  Score=431.26  Aligned_cols=299  Identities=30%  Similarity=0.436  Sum_probs=220.1

Q ss_pred             eeccCccccccceeee--CCCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHH------hh--------------------
Q 016380           63 VVQANEVIEDHSQVET--GRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFA------RE--------------------  114 (390)
Q Consensus        63 ~~~~~~~~ED~~~v~~--~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~------~~--------------------  114 (390)
                      ..+.|..|||++.+..  .++..||||||||||+.+|+|++++|+.+|.+.+      .+                    
T Consensus        45 ~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~  124 (467)
T 2pnq_A           45 RLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKH  124 (467)
T ss_dssp             EECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCC
T ss_pred             ccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccccc
Confidence            4466888999987754  3467899999999999999999999999886431      00                    


Q ss_pred             --------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHh------cCCCCcccccCceEE
Q 016380          115 --------------------------------GGTISEDILRSAFSATEDGFLTLVRRT------CGIKPVIAAIGSCCL  156 (390)
Q Consensus       115 --------------------------------~~~~~~~~l~~a~~~~~~~~~~~~~~~------~~~~~~~~~~GsT~~  156 (390)
                                                      ......++|++||.+++++|.......      +...+....+||||+
T Consensus       125 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~  204 (467)
T 2pnq_A          125 PNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATAC  204 (467)
T ss_dssp             TTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEE
T ss_pred             ccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEE
Confidence                                            111567899999999999998765321      001123456999999


Q ss_pred             EEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeeCCcccccccc
Q 016380          157 VGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSI  236 (390)
Q Consensus       157 v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsi  236 (390)
                      +++|.+++|||||+|||||||+|.+..|.+.+++||.||++.++.|++||.+.||......+..++  |++|.+++||||
T Consensus       205 v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~--Rv~G~l~vtRAl  282 (467)
T 2pnq_A          205 VAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--RLLGLLMPFRAF  282 (467)
T ss_dssp             EEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSS--SBTTTBSSSBCE
T ss_pred             EEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecC--ccccccccchhc
Confidence            999999999999999999999998545667899999999999999999999998864322222233  999999999999


Q ss_pred             cccccccCCCC----CCC--------CCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHHHHHHH
Q 016380          237 GDAYLKRPEFS----LDP--------SFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV  304 (390)
Q Consensus       237 Gd~~~k~~~~~----~~~--------~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~eiv~iv  304 (390)
                      ||..||.....    ..|        .+.++..|.++++|+|+++|+|..++|+++|.|||||||||||+|+++|++++|
T Consensus       283 Gd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv  362 (467)
T 2pnq_A          283 GDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV  362 (467)
T ss_dssp             ECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHH
T ss_pred             CchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHH
Confidence            99999864100    011        123556677788999999999999999999999999999999999999999999


Q ss_pred             HcC-------Ch------------------------------hHHHHHHHHHHHHHHHHhcccc---chhhhhcccCCCC
Q 016380          305 YNC-------PR------------------------------AGVARRLLKTALNAAAKKRQMG---YDELKKIDKGDRR  344 (390)
Q Consensus       305 ~~~-------~~------------------------------~~~A~~Lv~~Al~~~a~~~~~~---~~~l~~~~~~~rr  344 (390)
                      ...       .+                              +.+|..||+.|+..+ +..+|+   .++|+.|+++.||
T Consensus       363 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~-~~Ge~~~~~~~~ll~~~~~~~R  441 (467)
T 2pnq_A          363 GEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNN-EFGAVDHERLSKMLSLPEELAR  441 (467)
T ss_dssp             HHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-------------------------
T ss_pred             HHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCC-CcCcchHHHHHhhhcCCccccc
Confidence            764       12                              567899999999875 223344   4579999999999


Q ss_pred             ccCCceEEEEEEcCCcccCC
Q 016380          345 FYHDDITVVVIFIDHALLGN  364 (390)
Q Consensus       345 ~~~DniTvIVv~l~~~~~~~  364 (390)
                      +++||||||||+|+.+.+.+
T Consensus       442 ~~~DdITViVv~~~~~~~~~  461 (467)
T 2pnq_A          442 MYRDDITIIVVQFNSHVVGA  461 (467)
T ss_dssp             -CCSCEEEEEEEECHHHHHH
T ss_pred             cCCCCcEEEEEEeCchHhhh
Confidence            99999999999999877654
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 390
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-28
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 6e-16
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 3e-28
 Identities = 54/283 (19%), Positives = 96/283 (33%), Gaps = 53/283 (18%)

Query: 84  FVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCG 143
           F  VYDGH G + +++  +HL  H+       G+     + +  +    GFL +      
Sbjct: 54  FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 113

Query: 144 I---KPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACME 200
           +   K      GS  +  +I     Y  N GDSR ++              T DH     
Sbjct: 114 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL-----CRNRKVHFFTQDHKPSNP 168

Query: 201 EVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEP 260
             ++ +++                R+ G + VSR++GD   K               PE 
Sbjct: 169 LEKERIQNAGGSVMI--------QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEV 220

Query: 261 IRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCPRAG-----VARR 315
                            + +D+F+I A DG+W+ + N+E  D V +          V   
Sbjct: 221 H-----------DIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE 269

Query: 316 LLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFID 358
           ++ T L                      +   D+++V++I   
Sbjct: 270 VVDTCL---------------------YKGSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-47  Score=363.17  Aligned_cols=254  Identities=24%  Similarity=0.367  Sum_probs=207.2

Q ss_pred             ccCccceeeeccCccccccceeeeC-----CCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCC-------CchHHH
Q 016380           55 SYGDFSFAVVQANEVIEDHSQVETG-----RDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGG-------TISEDI  122 (390)
Q Consensus        55 ~~g~~s~~~~~~~~~~ED~~~v~~~-----~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~-------~~~~~~  122 (390)
                      .+|..++.+  .|..|||++.+...     ++..||||||||||+++|+|++++|++.|.+......       ....++
T Consensus        22 ~~g~~s~~G--~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a   99 (295)
T d1a6qa2          22 RYGLSSMQG--WRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNG   99 (295)
T ss_dssp             EEEEEEEEE--TSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHH
T ss_pred             EEEEEeCcc--CCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHH
Confidence            344445543  46678999876542     2568999999999999999999999999976433221       135677


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHH
Q 016380          123 LRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEV  202 (390)
Q Consensus       123 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~e  202 (390)
                      |+++|.++++.+.......    +....+|||+++++|.+++|||||+||||+|+++++     .+++||.||++.++.|
T Consensus       100 l~~a~~~~~~~~~~~~~~~----~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~-----~~~~lT~dH~~~~~~E  170 (295)
T d1a6qa2         100 IRTGFLEIDEHMRVMSEKK----HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR-----KVHFFTQDHKPSNPLE  170 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHT----TCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT-----EEEEECCCCCTTSHHH
T ss_pred             HHHHHHHHHHHHhhhhhhc----cCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc-----cceeeccccCcccHHH
Confidence            8888999988887654432    334678999999999999999999999999999987     8999999999999999


Q ss_pred             HHHHHhcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecC-CCC
Q 016380          203 RQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQ-PND  281 (390)
Q Consensus       203 r~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~-~~D  281 (390)
                      ++||.+.++.    +.    .+|++|.+.+||+|||..+|....            .+.+.|+|+++|++..+++. ++|
T Consensus       171 ~~Ri~~~gg~----v~----~~r~~g~l~~tRa~Gd~~~k~~~~------------~~~~~~~v~~~Pdi~~~~~~~~~~  230 (295)
T d1a6qa2         171 KERIQNAGGS----VM----IQRVNGSLAVSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSEEDD  230 (295)
T ss_dssp             HHHHHHTTCC----EE----TTEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCTTTE
T ss_pred             HhhHhhcCCc----cc----ccccCCceeeeeccCcHHhhhccc------------cCcccccccccccceEEEeecccc
Confidence            9999998643    21    248999999999999999987542            12356789999999999986 457


Q ss_pred             eEEEEEcCCCcccCCHHHHHHHHHc-----CChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEE
Q 016380          282 KFLIFASDGLWEHLTNQEAVDIVYN-----CPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIF  356 (390)
Q Consensus       282 ~fLILaSDGLwd~ls~~eiv~iv~~-----~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~  356 (390)
                      .|||||||||||+|+++|++++|++     .+++.+|++|++.|+..                     ++.||||||||+
T Consensus       231 ~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~---------------------gs~DNiTvivv~  289 (295)
T d1a6qa2         231 QFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK---------------------GSRDNMSVILIC  289 (295)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT---------------------TCCSCEEEEEEE
T ss_pred             eeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc---------------------CCCCCeEEEEEe
Confidence            8999999999999999999999975     35788999999999764                     358999999999


Q ss_pred             cCCc
Q 016380          357 IDHA  360 (390)
Q Consensus       357 l~~~  360 (390)
                      |+..
T Consensus       290 ~~~~  293 (295)
T d1a6qa2         290 FPNA  293 (295)
T ss_dssp             CTTS
T ss_pred             ccCC
Confidence            9864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure