Citrus Sinensis ID: 016394


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
MESRLSASLGLPSPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLSTESQTKFQPSNWLKPASRNSPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKELAEMDAAPA
ccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHEEccHHHHHHHHHccccccHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccc
cccHHHHHccccccccccccccccccccccccHHHHHHHHcccccccccccccHHcccHHHHccccHHHccHHHcccccccHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEcccccHHHHEHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHccccc
mesrlsaslglpspdpnhypllsestsLFTHLSTNLlsaqshkpfkndakfastslstesqtkfqpsnwlkpasrnspkIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSkleiypsvlipptagamgnIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLrnlpagvlsysSFEYLKAAVLSRtknanlkpieSVCCGALAGaisasittpLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEgwvgltrgmaprVVHSACFSAIGYFAFETARLTIMHQYLKKKElaemdaapa
mesrlsaslglpspdpnHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSlstesqtkfqpsnwlkpasrnsPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKkelaemdaapa
MESRLSASLGLPSPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLSTESQTKFQPSNWLKPASRNSPKIQSLIKSLSVFERALigaaaggiagaFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKELAEMDAAPA
*********************************************************************************SLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLK************
************SPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLSTESQTKFQPSN**********************ERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQT***********DAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAV*********KPIESVCCGALAGAISASITTPLDVVKTRLMT***************TGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTI******************
*********GLPSPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKF*************************SPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELIT********GRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKELAEMDAAPA
********LGLPSPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLSTESQTKFQPSNWLKPASRNSPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAV*KIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYL*************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MESRLSASLGLPSPDPNHYPLLSESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLSTESQTKFQPSNWLKPASRNSPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKELAEMDAAPA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query390 2.2.26 [Sep-21-2011]
Q9FHX2412 Protein MITOFERRINLIKE 1, yes no 0.992 0.939 0.721 1e-158
Q4V9P0267 S-adenosylmethionine mito yes no 0.646 0.943 0.336 2e-31
P23500304 Mitochondrial RNA-splicin yes no 0.689 0.884 0.317 1e-30
Q55DY8308 Mitoferrin OS=Dictyosteli yes no 0.712 0.902 0.320 1e-28
Q12482902 Mitochondrial aspartate-g no no 0.648 0.280 0.291 2e-28
Q27257312 Protein dif-1 OS=Caenorha no no 0.671 0.839 0.302 3e-28
P10566314 Mitochondrial RNA-splicin no no 0.671 0.834 0.289 5e-28
Q641C8266 S-adenosylmethionine mito N/A no 0.651 0.954 0.340 2e-27
Q6GLA2269 S-adenosylmethionine mito yes no 0.656 0.951 0.334 5e-27
P38921284 Putative mitochondrial ca no no 0.646 0.887 0.295 5e-27
>sp|Q9FHX2|MFL1_ARATH Protein MITOFERRINLIKE 1, chloroplastic OS=Arabidopsis thaliana GN=MFL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/410 (72%), Positives = 336/410 (81%), Gaps = 23/410 (5%)

Query: 1   MESRLSASLGLPSPDPNHYPLLSESTSLFTHLSTNLLSAQS-------------HKPFK- 46
           ME+RLS +LGLPSP+ NH    +E  SLFTH S +L S QS              KP K 
Sbjct: 1   MEARLSETLGLPSPNLNHCHFPNEFNSLFTHFS-DLTSVQSPIVRNPKLKTKSSQKPPKF 59

Query: 47  ------NDAKFASTSLSTESQTKFQPS--NWLKPASRNSPKIQSLIKSLSVFERALIGAA 98
                 +D  FASTS+S  +  K  P    W+KPASR+SP+IQ+LIK LSV+ERA+IGA 
Sbjct: 60  SANFRRSDPPFASTSISDPTHEKPGPEFLKWIKPASRSSPRIQTLIKQLSVWERAIIGAG 119

Query: 99  AGGIAGAFTYVCLYPLDTIKTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLV 158
           AGG+AGAFTYV L PLD IKTKLQTKGAS++YS+TFDAI KTFQ KGILGFYSGVSAV+V
Sbjct: 120 AGGLAGAFTYVTLLPLDAIKTKLQTKGASQVYSNTFDAIVKTFQAKGILGFYSGVSAVIV 179

Query: 159 GSTASSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAG 218
           GST SSA+YFGTCEFGKS LSK   +P+VLIPPTAGAMGNI+SSAIMVPKELITQRMQAG
Sbjct: 180 GSTFSSAVYFGTCEFGKSLLSKFPDFPTVLIPPTAGAMGNIISSAIMVPKELITQRMQAG 239

Query: 219 AKGRSWEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLK 278
           A GRS++VLLKILE DGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVL +TK ++L+
Sbjct: 240 ASGRSYQVLLKILEKDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLEKTKQSHLE 299

Query: 279 PIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEE 338
           P++SVCCGALAGAISASITTPLDVVKTRLMTQ+H EAV+K+   MYTGV  TVKQIL EE
Sbjct: 300 PLQSVCCGALAGAISASITTPLDVVKTRLMTQIHVEAVDKLGGAMYTGVAGTVKQILTEE 359

Query: 339 GWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKELAEMDAA 388
           GWVG TRGM PRVVHSACFSAIGYFAFETARLTI+++YLK+KE +E + A
Sbjct: 360 GWVGFTRGMGPRVVHSACFSAIGYFAFETARLTILNEYLKRKEESEANVA 409




Probably involved in iron transport into chloroplasts.
Arabidopsis thaliana (taxid: 3702)
>sp|Q4V9P0|SAMC_DANRE S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|P23500|MRS4_YEAST Mitochondrial RNA-splicing protein MRS4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS4 PE=1 SV=1 Back     alignment and function description
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function description
>sp|P10566|MRS3_YEAST Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS3 PE=1 SV=4 Back     alignment and function description
>sp|Q641C8|SAMC_XENLA S-adenosylmethionine mitochondrial carrier protein OS=Xenopus laevis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|P38921|PET8_YEAST Putative mitochondrial carrier protein PET8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET8 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
255570338393 mitochondrial carrier protein, putative 0.997 0.989 0.755 1e-163
224082418396 predicted protein [Populus trichocarpa] 0.989 0.974 0.746 1e-159
15238301412 Mitochondrial substrate carrier family p 0.992 0.939 0.721 1e-156
449462160391 PREDICTED: protein MITOFERRINLIKE 1, chl 0.982 0.979 0.715 1e-156
297791867412 mitochondrial substrate carrier family p 0.992 0.939 0.712 1e-153
225463885401 PREDICTED: protein MITOFERRINLIKE 1, chl 0.974 0.947 0.695 1e-150
356499565364 PREDICTED: mitochondrial RNA-splicing pr 0.923 0.989 0.694 1e-145
190898946308 mitochondrial substrate carrier [Populus 0.764 0.967 0.788 1e-127
190898972308 mitochondrial substrate carrier [Populus 0.741 0.938 0.809 1e-127
190898922308 mitochondrial substrate carrier [Populus 0.764 0.967 0.788 1e-127
>gi|255570338|ref|XP_002526128.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223534505|gb|EEF36204.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/392 (75%), Positives = 339/392 (86%), Gaps = 3/392 (0%)

Query: 1   MESRLSASLGLPSPDP-NHY-PLL-SESTSLFTHLSTNLLSAQSHKPFKNDAKFASTSLS 57
           ME+ L ASLGLP+PDP N + P++ ++  +LFTH  +        KP      FAS S+S
Sbjct: 1   MEANLCASLGLPAPDPYNQFNPVIQTDFKNLFTHFPSQNPIKTHKKPIIKSLPFASNSIS 60

Query: 58  TESQTKFQPSNWLKPASRNSPKIQSLIKSLSVFERALIGAAAGGIAGAFTYVCLYPLDTI 117
           +  ++    S WLKP SRNSPK+QSL+K+LSVFERALIGA  GGIAGAFTYVCL+PLDTI
Sbjct: 61  STPKSTPNFSKWLKPTSRNSPKVQSLMKNLSVFERALIGAGGGGIAGAFTYVCLHPLDTI 120

Query: 118 KTKLQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSF 177
           KTKLQTKGAS++YSST DAI KTFQ +GILGFYSGVSAV+VGSTASSA+YFGTCEFGKS 
Sbjct: 121 KTKLQTKGASQIYSSTIDAIVKTFQERGILGFYSGVSAVIVGSTASSAVYFGTCEFGKSI 180

Query: 178 LSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGIL 237
           LSKL+ YPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEV+LKILE DGIL
Sbjct: 181 LSKLDKYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVMLKILEKDGIL 240

Query: 238 GLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASIT 297
           GLY+GY ATLLRNLPAGVLSYSSFEYLKAAV+ +TK + L+PIESVCCGALAGAISASIT
Sbjct: 241 GLYSGYFATLLRNLPAGVLSYSSFEYLKAAVMRKTKKSYLEPIESVCCGALAGAISASIT 300

Query: 298 TPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACF 357
           TPLDV+KTRLMTQV+ E V+K++A MY+GV+ATVKQI+KEEGWVG TRGM PRV+HSACF
Sbjct: 301 TPLDVIKTRLMTQVNKEVVDKVSAAMYSGVSATVKQIMKEEGWVGFTRGMGPRVLHSACF 360

Query: 358 SAIGYFAFETARLTIMHQYLKKKELAEMDAAP 389
           SA+GYFAFETARLT++HQYLK KEL ++D AP
Sbjct: 361 SALGYFAFETARLTLLHQYLKHKELRDLDLAP 392




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082418|ref|XP_002306686.1| predicted protein [Populus trichocarpa] gi|222856135|gb|EEE93682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15238301|ref|NP_199028.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|75309103|sp|Q9FHX2.1|MFL1_ARATH RecName: Full=Protein MITOFERRINLIKE 1, chloroplastic; Short=AtMFL1; Flags: Precursor gi|9757958|dbj|BAB08446.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gi|332007388|gb|AED94771.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449462160|ref|XP_004148809.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic-like isoform 1 [Cucumis sativus] gi|449462162|ref|XP_004148810.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic-like isoform 2 [Cucumis sativus] gi|449506952|ref|XP_004162893.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic-like isoform 1 [Cucumis sativus] gi|449506956|ref|XP_004162894.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297791867|ref|XP_002863818.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297309653|gb|EFH40077.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225463885|ref|XP_002263642.1| PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|356499565|ref|XP_003518609.1| PREDICTED: mitochondrial RNA-splicing protein MRS4-like [Glycine max] Back     alignment and taxonomy information
>gi|190898946|gb|ACE97986.1| mitochondrial substrate carrier [Populus tremula] Back     alignment and taxonomy information
>gi|190898972|gb|ACE97999.1| mitochondrial substrate carrier [Populus tremula] Back     alignment and taxonomy information
>gi|190898922|gb|ACE97974.1| mitochondrial substrate carrier [Populus tremula] gi|190898924|gb|ACE97975.1| mitochondrial substrate carrier [Populus tremula] gi|190898926|gb|ACE97976.1| mitochondrial substrate carrier [Populus tremula] gi|190898928|gb|ACE97977.1| mitochondrial substrate carrier [Populus tremula] gi|190898930|gb|ACE97978.1| mitochondrial substrate carrier [Populus tremula] gi|190898932|gb|ACE97979.1| mitochondrial substrate carrier [Populus tremula] gi|190898948|gb|ACE97987.1| mitochondrial substrate carrier [Populus tremula] gi|190898952|gb|ACE97989.1| mitochondrial substrate carrier [Populus tremula] gi|190898954|gb|ACE97990.1| mitochondrial substrate carrier [Populus tremula] gi|190898956|gb|ACE97991.1| mitochondrial substrate carrier [Populus tremula] gi|190898958|gb|ACE97992.1| mitochondrial substrate carrier [Populus tremula] gi|190898960|gb|ACE97993.1| mitochondrial substrate carrier [Populus tremula] gi|190898966|gb|ACE97996.1| mitochondrial substrate carrier [Populus tremula] gi|190898970|gb|ACE97998.1| mitochondrial substrate carrier [Populus tremula] gi|190898974|gb|ACE98000.1| mitochondrial substrate carrier [Populus tremula] gi|190898976|gb|ACE98001.1| mitochondrial substrate carrier [Populus tremula] gi|190898978|gb|ACE98002.1| mitochondrial substrate carrier [Populus tremula] gi|190898980|gb|ACE98003.1| mitochondrial substrate carrier [Populus tremula] gi|190898982|gb|ACE98004.1| mitochondrial substrate carrier [Populus tremula] gi|190898984|gb|ACE98005.1| mitochondrial substrate carrier [Populus tremula] gi|190898986|gb|ACE98006.1| mitochondrial substrate carrier [Populus tremula] gi|190898988|gb|ACE98007.1| mitochondrial substrate carrier [Populus tremula] gi|190898990|gb|ACE98008.1| mitochondrial substrate carrier [Populus tremula] gi|190898992|gb|ACE98009.1| mitochondrial substrate carrier [Populus tremula] gi|190898994|gb|ACE98010.1| mitochondrial substrate carrier [Populus tremula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
TAIR|locus:2165755412 Mfl1 "MitoFerrinLike1" [Arabid 0.956 0.905 0.701 3.3e-134
TAIR|locus:505006167345 SAMC2 "S-adenosylmethionine ca 0.733 0.828 0.347 2e-31
WB|WBGene00008364269 D1046.3 [Caenorhabditis elegan 0.605 0.877 0.329 2e-31
TAIR|locus:2123096628 AT4G11440 [Arabidopsis thalian 0.633 0.393 0.348 2.1e-31
DICTYBASE|DDB_G0269470308 mcfF "putative mitoferrin" [Di 0.664 0.840 0.327 5.4e-31
TAIR|locus:2122452325 SAMC1 "S-adenosylmethionine ca 0.605 0.726 0.349 1.8e-30
SGD|S000001760304 MRS4 "Iron transporter of the 0.661 0.848 0.310 3.8e-30
UNIPROTKB|Q641C8266 slc25a26 "S-adenosylmethionine 0.620 0.909 0.337 4.9e-30
ZFIN|ZDB-GENE-050913-126267 slc25a26 "solute carrier famil 0.615 0.898 0.344 1e-29
UNIPROTKB|Q6GLA2269 slc25a26 "S-adenosylmethionine 0.617 0.895 0.340 1.6e-29
TAIR|locus:2165755 Mfl1 "MitoFerrinLike1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
 Identities = 272/388 (70%), Positives = 312/388 (80%)

Query:    16 PNHYPLL----SESTSLFTHLSTN--LLSAQSHKPFK-------NDAKFASTSLSTESQT 62
             PN +  L    S+ TS+ + +  N  L +  S KP K       +D  FASTS+S  +  
Sbjct:    22 PNEFNSLFTHFSDLTSVQSPIVRNPKLKTKSSQKPPKFSANFRRSDPPFASTSISDPTHE 81

Query:    63 KFQPS--NWLKPASRNSPKIQSLIKSLSVFERALXXXXXXXXXXXFTYVCLYPLDTIKTK 120
             K  P    W+KPASR+SP+IQ+LIK LSV+ERA+           FTYV L PLD IKTK
Sbjct:    82 KPGPEFLKWIKPASRSSPRIQTLIKQLSVWERAIIGAGAGGLAGAFTYVTLLPLDAIKTK 141

Query:   121 LQTKGASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSK 180
             LQTKGAS++YS+TFDAI KTFQ KGILGFYSGVSAV+VGST SSA+YFGTCEFGKS LSK
Sbjct:   142 LQTKGASQVYSNTFDAIVKTFQAKGILGFYSGVSAVIVGSTFSSAVYFGTCEFGKSLLSK 201

Query:   181 LEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWEVLLKILEVDGILGLY 240
                +P+VLIPPTAGAMGNI+SSAIMVPKELITQRMQAGA GRS++VLLKILE DGILGLY
Sbjct:   202 FPDFPTVLIPPTAGAMGNIISSAIMVPKELITQRMQAGASGRSYQVLLKILEKDGILGLY 261

Query:   241 AGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPL 300
             AGYSATLLRNLPAGVLSYSSFEYLKAAVL +TK ++L+P++SVCCGALAGAISASITTPL
Sbjct:   262 AGYSATLLRNLPAGVLSYSSFEYLKAAVLEKTKQSHLEPLQSVCCGALAGAISASITTPL 321

Query:   301 DVVKTRLMTQVHGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAI 360
             DVVKTRLMTQ+H EAV+K+   MYTGV  TVKQIL EEGWVG TRGM PRVVHSACFSAI
Sbjct:   322 DVVKTRLMTQIHVEAVDKLGGAMYTGVAGTVKQILTEEGWVGFTRGMGPRVVHSACFSAI 381

Query:   361 GYFAFETARLTIMHQYLKKKELAEMDAA 388
             GYFAFETARLTI+++YLK+KE +E + A
Sbjct:   382 GYFAFETARLTILNEYLKRKEESEANVA 409




GO:0005739 "mitochondrion" evidence=ISM
GO:0006810 "transport" evidence=ISS
GO:0009507 "chloroplast" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0006826 "iron ion transport" evidence=IMP
GO:0010039 "response to iron ion" evidence=IEP
GO:0009536 "plastid" evidence=IDA
TAIR|locus:505006167 SAMC2 "S-adenosylmethionine carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00008364 D1046.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2123096 AT4G11440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269470 mcfF "putative mitoferrin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2122452 SAMC1 "S-adenosylmethionine carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
SGD|S000001760 MRS4 "Iron transporter of the mitochondrial carrier family" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q641C8 slc25a26 "S-adenosylmethionine mitochondrial carrier protein" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-126 slc25a26 "solute carrier family 25, member 26" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GLA2 slc25a26 "S-adenosylmethionine mitochondrial carrier protein" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FHX2MFL1_ARATHNo assigned EC number0.72190.99230.9393yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-21
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 3e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-11
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 7e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 86.5 bits (215), Expect = 5e-21
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 97  AAAGGIAGAFTYVCLYPLDTIKTKLQ--TKGASKMYSSTFDAIFKTFQTKGILGFYSGVS 154
             AGGIAGA      YPLD +KT+LQ    G S+ Y    D   K ++ +GI G Y G+ 
Sbjct: 9   LLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLL 68

Query: 155 AVLVGSTASSAIYFGTCEFGKSFLSK 180
             L+    ++AIYFGT E  K  L K
Sbjct: 69  PNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 390
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.98
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.98
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0769308 consensus Predicted mitochondrial carrier protein 99.94
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.92
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.91
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.71
KOG1519297 consensus Predicted mitochondrial carrier protein 99.69
KOG2954427 consensus Mitochondrial carrier protein [General f 99.63
KOG2745321 consensus Mitochondrial carrier protein [General f 99.55
KOG2954427 consensus Mitochondrial carrier protein [General f 98.46
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=4.3e-59  Score=428.13  Aligned_cols=280  Identities=27%  Similarity=0.406  Sum_probs=249.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHhhHhhccCC---CCCCCccHHHHHHHHHHhcCcccccccchHHHHhHHhhhhHH
Q 016394           91 ERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKG---ASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAIY  167 (390)
Q Consensus        91 ~~~~~~~~aG~~ag~~~~~~~~Pld~vK~r~Q~~~---~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~  167 (390)
                      ...+..++||++||+++.+++.|||++|+|+|++.   ...++.|.++.+++|+++||++|||||..+++++.+|+.++.
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avq  104 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQ  104 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhh
Confidence            35677889999999999999999999999999997   356789999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhhh--ccCCCCcchHhHHHHHHHHHHhhhhccHHHHHHHHhcCC----CCChHHHHHHHHHHhcHhhccc
Q 016394          168 FGTCEFGKSFLSK--LEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGA----KGRSWEVLLKILEVDGILGLYA  241 (390)
Q Consensus       168 f~~ye~~k~~l~~--~~~~~~~~~~~~aG~~ag~~~~~v~~Pld~iktr~q~~~----~~~~~~~~~~i~~~~G~~glyr  241 (390)
                      |..||..|+.+..  .....+....++||++||+++.+++||+|++|+|+-++.    +.+..+++++|+++||++||||
T Consensus       105 f~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYr  184 (320)
T KOG0752|consen  105 FSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYR  184 (320)
T ss_pred             hhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhc
Confidence            9999999974322  222556788899999999999999999999999997763    5688999999999999999999


Q ss_pred             chHHHHHhHhcchhHHHHHHHHHHH-HHHhhccCCCCChHHHHHHHHHHHHHHHHhhccHHHHHHHHhcccCcccchhhh
Q 016394          242 GYSATLLRNLPAGVLSYSSFEYLKA-AVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIA  320 (390)
Q Consensus       242 G~~~~l~r~~~~~~i~f~~ye~~k~-~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~PldviktR~q~~~~~~~~~~~~  320 (390)
                      |+.|++++.+|+.++.|.+||.+|+ .+.+..++++.+.+..+++|++||+++.+++||||+||+|||+......   ..
T Consensus       185 Gl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~---~~  261 (320)
T KOG0752|consen  185 GLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYF---GG  261 (320)
T ss_pred             CcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcccc---cc
Confidence            9999999999999999999999999 4444444567788999999999999999999999999999999875411   11


Q ss_pred             hhccCcHHHHHHHHHHhhChhhcccChHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 016394          321 AVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIM  373 (390)
Q Consensus       321 ~~~y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~~~~ye~~k~~~~  373 (390)
                      ...|+++++|+++|+++||+.|||||+.|++++++|..++.|++||.+|..+.
T Consensus       262 ~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~  314 (320)
T KOG0752|consen  262 GFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLR  314 (320)
T ss_pred             ccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhh
Confidence            22368999999999999999999999999999999999999999999995543



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-13
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-05
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 9e-09
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 32/288 (11%) Query: 112 YPLDTIKTKLQTKG---------ASKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTA 162 +PLDT K +LQ +G AS Y I +T+G Y+G+ A L + Sbjct: 20 FPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMS 79 Query: 163 SSAIYFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGAK-- 220 +++ G + K F +K + + AG+ ++ A+ P +++ R QA A+ Sbjct: 80 FASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG 139 Query: 221 -GRSWEVLLK----ILEVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNA 275 GR ++ ++ I +GI GL+ G S + RN +++ +K +L A Sbjct: 140 GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLL----KA 195 Query: 276 NLKPIESVC---CGALAGAISASITTPLDVVKTRLMTQVHGEAVNKIAAVMYTGVTATVK 332 NL + C AG + I +P+DVVKTR M G+ Y Sbjct: 196 NLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ---------YHSAGHCAL 246 Query: 333 QILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKK 380 +L++EG +G P + ++ + + +E + +M Y ++ Sbjct: 247 TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSRE 294
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-49
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-27
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-16
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-14
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-45
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  167 bits (425), Expect = 2e-49
 Identities = 61/291 (20%), Positives = 115/291 (39%), Gaps = 27/291 (9%)

Query: 98  AAGGIAGAFTYVCLYPLDTIKTKLQTKGASK------MYSSTFDAIFKTFQTKGILGFYS 151
            AGG+A A +   + P++ +K  LQ + ASK       Y    D + +  + +G L F+ 
Sbjct: 12  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71

Query: 152 GVSAVLVGSTASSAIYFGTCEFGKS-FLSKLEIYPSVLIPPT----AGAMGNIVSSAIMV 206
           G  A ++    + A+ F   +  K  FL  ++ +            +G      S   + 
Sbjct: 72  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVY 131

Query: 207 PKELITQRMQAGAKGRS--------WEVLLKILEVDGILGLYAGYSATLLRNLPAGVLSY 258
           P +    R+ A     +           + KI + DG+ GLY G++ ++   +      +
Sbjct: 132 PLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYF 191

Query: 259 SSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNK 318
             ++  K  +       N+  I S        A++  ++ P D V+ R+M Q    +  K
Sbjct: 192 GVYDTAKGML---PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ----SGRK 244

Query: 319 IAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETAR 369
            A +MYTG     ++I K+EG     +G    V+      A     ++  +
Sbjct: 245 GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEIK 294


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=9.7e-58  Score=431.36  Aligned_cols=277  Identities=23%  Similarity=0.352  Sum_probs=248.0

Q ss_pred             HHHHHHHHHHHHhhhcchHHHhhHhhccCCC---------CCCCccHHHHHHHHHHhcCcccccccchHHHHhHHhhhhH
Q 016394           96 GAAAGGIAGAFTYVCLYPLDTIKTKLQTKGA---------SKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASSAI  166 (390)
Q Consensus        96 ~~~aG~~ag~~~~~~~~Pld~vK~r~Q~~~~---------~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i  166 (390)
                      .+++|++||+++.+++||||+||+|+|++..         ...|.+.++++++|+++||++|||||+.+++++.++..++
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i   83 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV   83 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999864         2368999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhhccCCCCcchHhHHHHHHHHHHhhhhccHHHHHHHHhcCC-------CCChHHHHHHHHHHhcHhhc
Q 016394          167 YFGTCEFGKSFLSKLEIYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGA-------KGRSWEVLLKILEVDGILGL  239 (390)
Q Consensus       167 ~f~~ye~~k~~l~~~~~~~~~~~~~~aG~~ag~~~~~v~~Pld~iktr~q~~~-------~~~~~~~~~~i~~~~G~~gl  239 (390)
                      +|++||.+|+.+.+.....+....+++|++||+++.++++|+|++|+|+|++.       +.+.++++++|+++||++||
T Consensus        84 ~f~~ye~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~gl  163 (303)
T 2lck_A           84 RIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGL  163 (303)
T ss_dssp             TTTHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHhcCCcCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhh
Confidence            99999999998865422355677899999999999999999999999999864       35789999999999999999


Q ss_pred             ccchHHHHHhHhcchhHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHHhhccHHHHHHHHhcccCcccchhh
Q 016394          240 YAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKI  319 (390)
Q Consensus       240 yrG~~~~l~r~~~~~~i~f~~ye~~k~~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~PldviktR~q~~~~~~~~~~~  319 (390)
                      |||+.++++|.+|+++++|.+||.+|+.+.+... ...+....+++|++||++++++++|+|+||+|||.+...      
T Consensus       164 yrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~------  236 (303)
T 2lck_A          164 WKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALG------  236 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSS------
T ss_pred             hCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccc------
Confidence            9999999999999999999999999998764332 244567889999999999999999999999999998542      


Q ss_pred             hhhccCcHHHHHHHHHHhhChhhcccChHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 016394          320 AAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETARLTIMHQYLKKKEL  382 (390)
Q Consensus       320 ~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~~~~ye~~k~~~~~~~~~~~~~  382 (390)
                         .|.++++|+++|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+.+..+.+.
T Consensus       237 ---~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~~~~~~~  296 (303)
T 2lck_A          237 ---QYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP  296 (303)
T ss_dssp             ---SCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHCC
T ss_pred             ---ccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence               289999999999999999999999999999999999999999999998776555444333



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 390
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-27
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  108 bits (269), Expect = 2e-27
 Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 27/293 (9%)

Query: 94  LIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGASK------MYSSTFDAIFKTFQTKGIL 147
           L    AGG+A A +   + P++ +K  LQ + ASK       Y    D + +  + +G L
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 148 GFYSGVSAVLVGSTASSAIYFGTCEFGKSFLSK-----LEIYPSVLIPPTAGAMGNIVSS 202
            F+ G  A ++    + A+ F   +  K           + +        +G      S 
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 126

Query: 203 AIMVPKELITQRMQAGAKGRS--------WEVLLKILEVDGILGLYAGYSATLLRNLPAG 254
             + P +    R+ A     +           + KI + DG+ GLY G++ ++   +   
Sbjct: 127 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYR 186

Query: 255 VLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQVHGE 314
              +  ++  K          N+  I S        A++  ++ P D V+ R+M Q    
Sbjct: 187 AAYFGVYDTAKGM---LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ---- 239

Query: 315 AVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFET 367
           +  K A +MYTG     ++I K+EG     +G    V+      A     ++ 
Sbjct: 240 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=9.7e-51  Score=378.93  Aligned_cols=270  Identities=21%  Similarity=0.300  Sum_probs=237.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHhhHhhccCCC------CCCCccHHHHHHHHHHhcCcccccccchHHHHhHHhhh
Q 016394           91 ERALIGAAAGGIAGAFTYVCLYPLDTIKTKLQTKGA------SKMYSSTFDAIFKTFQTKGILGFYSGVSAVLVGSTASS  164 (390)
Q Consensus        91 ~~~~~~~~aG~~ag~~~~~~~~Pld~vK~r~Q~~~~------~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~  164 (390)
                      .+++.++++|++||+++.+++||||+||+|+|+++.      ...|+++++++++++++||+++||||+.+.+++..+..
T Consensus         4 ~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~   83 (292)
T d1okca_           4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   83 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhccc
Confidence            356778899999999999999999999999998753      24578999999999999999999999999999999999


Q ss_pred             hHHHHHHHhhhhhhhhccCCC-----CcchHhHHHHHHHHHHhhhhccHHHHHHHHhcCC--------CCChHHHHHHHH
Q 016394          165 AIYFGTCEFGKSFLSKLEIYP-----SVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGA--------KGRSWEVLLKIL  231 (390)
Q Consensus       165 ~i~f~~ye~~k~~l~~~~~~~-----~~~~~~~aG~~ag~~~~~v~~Pld~iktr~q~~~--------~~~~~~~~~~i~  231 (390)
                      +++|.+||.+++.+.+.....     .....+++|++|++++.++++|+|++|+|+|.+.        +.+..+++++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~  163 (292)
T d1okca_          84 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF  163 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhh
Confidence            999999999999886543221     2345678999999999999999999999999863        235789999999


Q ss_pred             HHhcHhhcccchHHHHHhHhcchhHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHHhhccHHHHHHHHhccc
Q 016394          232 EVDGILGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRTKNANLKPIESVCCGALAGAISASITTPLDVVKTRLMTQV  311 (390)
Q Consensus       232 ~~~G~~glyrG~~~~l~r~~~~~~i~f~~ye~~k~~~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~PldviktR~q~~~  311 (390)
                      ++||+++||+|+.++++|.+++++++|..||.+|+.+.+.   ........+++++++++++++++||+||||+|||.+.
T Consensus       164 ~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~  240 (292)
T d1okca_         164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP---KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS  240 (292)
T ss_dssp             HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG---GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             hccchhhhhccccccccceehHhhhhhhhccchhhhcccc---cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999866433   3345678899999999999999999999999999986


Q ss_pred             CcccchhhhhhccCcHHHHHHHHHHhhChhhcccChHHHhHHHHHHHHHHHHHHHHH
Q 016394          312 HGEAVNKIAAVMYTGVTATVKQILKEEGWVGLTRGMAPRVVHSACFSAIGYFAFETA  368 (390)
Q Consensus       312 ~~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~llr~~p~~~i~~~~ye~~  368 (390)
                      .....    ...|.++++++++|+++||++|||||+.|+++|.+| +++.|.+||.+
T Consensus       241 ~~~~~----~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         241 GRKGA----DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             TCCGG----GCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             CCCCC----CCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            54322    235899999999999999999999999999999876 67999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure