Citrus Sinensis ID: 016408

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
ccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEHHHHHHHHccEEEcccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHcHcccHHHHcccccccccccccccccccccccccccccccccccEEcccccccEccccccccccccccccccccccc
mlseveplqitfacgfqarkvhpdknpndplaAQNFQVLGEAYQvlsdpaqrqaydaygksgisteaiiDPAAIFAMLFGSELFEDYIGQLAMASVAsldiftegeefdAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAksnngsegetvlsggvhklngsdscydasspitspkstehqessqsafasqspyveapnlsdaqfgrdfpiptappgaqghsstgke
MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIfqraksnngsegeTVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPtappgaqghsstgke
MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTeeeleeYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNakkeelrarakalkTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQEssqsafasqsPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
*******LQITFACGFQAR*************AQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEF*******************LADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQ***********************SHKKLMIDSLWKLNVADIEATLSRVCQMVLQD****************************************************************************************************************
*LSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI**********IFAMLFGSELFEDYIGQLA*************************KVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVS**********MLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIA****************************SHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK***************************************************************NLSDAQFGRDF******************
MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDA*************************YVEAPNLSDAQFGRDFPIPTAP************
****VEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKS***********************************************SQSPYVEAPNLSDAQFGRDFPIPTAPP***********
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDxxxxxxxxxxxxxxxxxxxxxILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVxxxxxxxxxxxxxxxxxxxxxGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query390 2.2.26 [Sep-21-2011]
Q8GYX8398 Chaperone protein dnaJ 10 no no 0.964 0.944 0.715 1e-144
P39101391 Protein CAJ1 OS=Saccharom yes no 0.764 0.762 0.255 8e-22
O59731355 Uncharacterized J domain- yes no 0.741 0.814 0.266 2e-19
P40564432 DnaJ-like protein 1 OS=Sa no no 0.184 0.166 0.493 2e-13
Q10209392 Uncharacterized J domain- no no 0.723 0.719 0.240 2e-13
Q96EY1480 DnaJ homolog subfamily A yes no 0.179 0.145 0.4 5e-09
Q8IM77492 Uncharacterized J domain- no no 0.348 0.276 0.299 7e-09
Q5R8J8337 DnaJ homolog subfamily B no no 0.238 0.275 0.366 8e-09
Q9UDY4337 DnaJ homolog subfamily B no no 0.238 0.275 0.366 8e-09
Q9D832337 DnaJ homolog subfamily B yes no 0.238 0.275 0.366 9e-09
>sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2 Back     alignment and function desciption
 Score =  512 bits (1318), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/380 (71%), Positives = 314/380 (82%), Gaps = 4/380 (1%)

Query: 9   QITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI 68
           +I  A   +AR+VHPDKNPNDP AA NFQVLGEAYQVLSD  QRQAYDA GKSGIST+AI
Sbjct: 21  EIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKSGISTDAI 80

Query: 69  IDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKL 128
           IDPAAIFAMLFGSELFE YIGQLAMAS+ASLDIFTEG++FD KK+Q+K+++VQKERE+KL
Sbjct: 81  IDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTKKIQEKLRIVQKEREDKL 140

Query: 129 ADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAI 188
           A IL+ RLN+YV  NK++FI+ AEAEV+RLSNAAYGVDMLNTIGYIY RQAAKELGKKAI
Sbjct: 141 AQILKDRLNEYVI-NKDEFISNAEAEVARLSNAAYGVDMLNTIGYIYVRQAAKELGKKAI 199

Query: 189 YLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSH 248
           YLGVPFIAEWFRNKGHFIKSQ+TAATGA AL QLQE+MK+QL+ EGNYTEEELEEY+Q+H
Sbjct: 200 YLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKRQLNTEGNYTEEELEEYLQAH 259

Query: 249 KKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNG 308
           K++MIDSLWKLNVADIEATL RVCQ+VLQD  AK+EELR RA+ LK LG+IFQRAK+   
Sbjct: 260 KRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKALGRIFQRAKT--A 317

Query: 309 SEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQF 368
           SE + + +    KLNG+   +D  +  TSPKS+E   S+      QSPYVE   L D QF
Sbjct: 318 SESDPLENSEPQKLNGNGKNHDEDTS-TSPKSSEASHSTSGPQEPQSPYVEEFKLGDEQF 376

Query: 369 GRDFPIPTAPPGAQGHSSTG 388
              FP P  PPGA  +SS+G
Sbjct: 377 NYYFPRPAPPPGAGKYSSSG 396
Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAJ1 PE=1 SV=1 Back     alignment and function description
>sp|O59731|YHXB_SCHPO Uncharacterized J domain-containing protein C3E7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3E7.11c PE=3 SV=1 Back     alignment and function description
>sp|P40564|DJP1_YEAST DnaJ-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DJP1 PE=1 SV=1 Back     alignment and function description
>sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.01 PE=1 SV=1 Back     alignment and function description
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens GN=DNAJA3 PE=1 SV=2 Back     alignment and function description
>sp|Q8IM77|YPFJ1_PLAF7 Uncharacterized J domain-containing protein PF14_0013 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0013 PE=4 SV=2 Back     alignment and function description
>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1 Back     alignment and function description
>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1 Back     alignment and function description
>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
225457731405 PREDICTED: chaperone protein dnaJ 10 [Vi 0.979 0.943 0.838 0.0
255539400400 Chaperone protein dnaJ, putative [Ricinu 0.974 0.95 0.842 1e-179
224086162414 predicted protein [Populus trichocarpa] 0.974 0.917 0.801 1e-175
356497524395 PREDICTED: chaperone protein dnaJ 10-lik 0.961 0.949 0.806 1e-171
224061787374 predicted protein [Populus trichocarpa] 0.905 0.943 0.832 1e-169
147797970 996 hypothetical protein VITISV_028729 [Viti 0.823 0.322 0.869 1e-161
297850538391 DNAJ heat shock N-terminal domain-contai 0.951 0.948 0.721 1e-151
18394951391 DNAJ heat shock N-terminal domain-contai 0.951 0.948 0.721 1e-151
334182734400 DNAJ heat shock N-terminal domain-contai 0.951 0.927 0.707 1e-150
115477372394 Os08g0522600 [Oryza sativa Japonica Grou 0.946 0.936 0.700 1e-149
>gi|225457731|ref|XP_002278176.1| PREDICTED: chaperone protein dnaJ 10 [Vitis vinifera] gi|297745644|emb|CBI40809.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/385 (83%), Positives = 354/385 (91%), Gaps = 3/385 (0%)

Query: 9   QITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI 68
           +I  A   +AR+VHPDKNPNDPLAAQNFQVLGEAYQVLSDP+QRQAYDA+GKSGIST++I
Sbjct: 21  EIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPSQRQAYDAHGKSGISTDSI 80

Query: 69  IDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKL 128
           I+PAAIFAMLFGSELFE+YIGQLAMAS+ASLDIFTEGE+FDAKKLQ+KM+VVQKEREEKL
Sbjct: 81  IEPAAIFAMLFGSELFEEYIGQLAMASMASLDIFTEGEQFDAKKLQEKMRVVQKEREEKL 140

Query: 129 ADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAI 188
           ADIL+ RLNQYVQGNKEDF+N+AEAE+SRLSNAAYGVDMLNTIGYIYARQAAKELGKKAI
Sbjct: 141 ADILKDRLNQYVQGNKEDFVNHAEAELSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAI 200

Query: 189 YLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSH 248
           YLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSH
Sbjct: 201 YLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSH 260

Query: 249 KKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNG 308
           KKLMIDSLWKLNVADIEATLSRVCQMVLQDNN KKEELRARAK LKTLGKIFQR KS+NG
Sbjct: 261 KKLMIDSLWKLNVADIEATLSRVCQMVLQDNNCKKEELRARAKGLKTLGKIFQRVKSSNG 320

Query: 309 SEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFAS--QSPYVEAPNLSDA 366
           +E E +L+  VHKLNGS+  +DA SP TSPKS+  +E S +AFAS  QSPYVEAP  + A
Sbjct: 321 NEDEAMLNSAVHKLNGSEPSHDACSPSTSPKSSNLEEQSYTAFASQFQSPYVEAPQFAGA 380

Query: 367 QFG-RDFPIPTAPPGAQGHSSTGKE 390
           Q+   +FP+PTAPPGAQ  SSTG+E
Sbjct: 381 QYNYSNFPMPTAPPGAQRDSSTGRE 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255539400|ref|XP_002510765.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|223551466|gb|EEF52952.1| Chaperone protein dnaJ, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224086162|ref|XP_002307837.1| predicted protein [Populus trichocarpa] gi|222857286|gb|EEE94833.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497524|ref|XP_003517610.1| PREDICTED: chaperone protein dnaJ 10-like [Glycine max] Back     alignment and taxonomy information
>gi|224061787|ref|XP_002300601.1| predicted protein [Populus trichocarpa] gi|222842327|gb|EEE79874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147797970|emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297850538|ref|XP_002893150.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338992|gb|EFH69409.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18394951|ref|NP_564134.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|8886993|gb|AAF80653.1|AC012190_9 Similar to a dnaJ-like protein from Arabidopsis thaliana gb|Y11969. It contains a DnaJ domain PF|00226. EST gb|H37613 comes from this gene [Arabidopsis thaliana] gi|15028271|gb|AAK76724.1| unknown protein [Arabidopsis thaliana] gi|332191939|gb|AEE30060.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334182734|ref|NP_001185052.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|332191941|gb|AEE30062.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115477372|ref|NP_001062282.1| Os08g0522600 [Oryza sativa Japonica Group] gi|42407330|dbj|BAD08769.1| DnaJ protein family-like [Oryza sativa Japonica Group] gi|42407725|dbj|BAD08872.1| DnaJ protein family-like [Oryza sativa Japonica Group] gi|113624251|dbj|BAF24196.1| Os08g0522600 [Oryza sativa Japonica Group] gi|215740556|dbj|BAG97212.1| unnamed protein product [Oryza sativa Japonica Group] gi|218201477|gb|EEC83904.1| hypothetical protein OsI_29937 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
TAIR|locus:2030101398 AT1G76700 [Arabidopsis thalian 0.964 0.944 0.665 2.9e-126
TAIR|locus:2025252379 AT1G77020 [Arabidopsis thalian 0.830 0.854 0.528 3e-85
TAIR|locus:2136378345 AT4G39150 [Arabidopsis thalian 0.733 0.828 0.520 5.5e-77
TAIR|locus:2050120346 AT2G21510 [Arabidopsis thalian 0.774 0.872 0.496 1.1e-76
DICTYBASE|DDB_G0267994408 DDB_G0267994 "DNAJ heat shock 0.705 0.674 0.317 6.9e-31
ASPGD|ASPL0000040613466 AN3375 [Emericella nidulans (t 0.261 0.218 0.405 4.4e-25
CGD|CAL0002990461 orf19.1267 [Candida albicans ( 0.256 0.216 0.458 1.6e-22
UNIPROTKB|Q5A441461 DJP2 "Potential peroxisomal pr 0.256 0.216 0.458 1.6e-22
SGD|S000000850391 CAJ1 "Nuclear type II J heat s 0.312 0.312 0.335 2.1e-21
CGD|CAL0003840 508 DJP1 [Candida albicans (taxid: 0.351 0.269 0.417 5.2e-20
TAIR|locus:2030101 AT1G76700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
 Identities = 253/380 (66%), Positives = 292/380 (76%)

Query:     9 QITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI 68
             +I  A   +AR+VHPDKNPNDP AA NFQVLGEAYQVLSD  QRQAYDA GKSGIST+AI
Sbjct:    21 EIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKSGISTDAI 80

Query:    69 IDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKL 128
             IDPAAIFAMLFGSELFE YIGQLAMAS+ASLDIFTEG++FD KK+Q+K+++VQKERE+KL
Sbjct:    81 IDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTKKIQEKLRIVQKEREDKL 140

Query:   129 ADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAI 188
             A IL+ RLN+YV  NK++FI+ AEAEV+RLSNAAYGVDMLNTIGYIY RQAAKELGKKAI
Sbjct:   141 AQILKDRLNEYVI-NKDEFISNAEAEVARLSNAAYGVDMLNTIGYIYVRQAAKELGKKAI 199

Query:   189 YLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTXXXXXXYMQSH 248
             YLGVPFIAEWFRNKGHFIKSQ+TAATGA AL QLQE+MK+QL+ EGNYT      Y+Q+H
Sbjct:   200 YLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKRQLNTEGNYTEEELEEYLQAH 259

Query:   249 KKLMIDSLWKLNVADIEATLSRVCQMVLQDNNXXXXXXXXXXXXXXTLGKIFQRAKSNNG 308
             K++MIDSLWKLNVADIEATL RVCQ+VLQD                 LG+IFQRAK+   
Sbjct:   260 KRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKALGRIFQRAKT--A 317

Query:   309 SEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQEXXXXXXXXXXPYVEAPNLSDAQF 368
             SE + + +    KLNG+   +D  +  TSPKS+E             PYVE   L D QF
Sbjct:   318 SESDPLENSEPQKLNGNGKNHDEDTS-TSPKSSEASHSTSGPQEPQSPYVEEFKLGDEQF 376

Query:   369 GRDFPIPTAPPGAQGHSSTG 388
                FP P  PPGA  +SS+G
Sbjct:   377 NYYFPRPAPPPGAGKYSSSG 396
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0048527 "lateral root development" evidence=RCA
TAIR|locus:2025252 AT1G77020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136378 AT4G39150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050120 AT2G21510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267994 DDB_G0267994 "DNAJ heat shock N-terminal domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000040613 AN3375 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0002990 orf19.1267 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A441 DJP2 "Potential peroxisomal protein import protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000000850 CAJ1 "Nuclear type II J heat shock protein of the E. coli dnaJ family" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0003840 DJP1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8GYX8DNJ10_ARATHNo assigned EC number0.71570.96410.9447nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
pfam14308204 pfam14308, DnaJ-X, X-domain of DnaJ-containing 6e-80
pfam0022663 pfam00226, DnaJ, DnaJ domain 2e-13
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 2e-13
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 2e-11
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 1e-10
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 1e-10
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 2e-10
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 2e-10
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 3e-10
PTZ00475282 PTZ00475, PTZ00475, RESA-like protein; Provisional 4e-10
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 6e-10
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 2e-09
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 2e-09
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 4e-09
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 5e-09
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 5e-09
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 6e-09
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 6e-09
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 8e-09
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 1e-08
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 1e-08
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 6e-08
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 1e-07
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 1e-07
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 2e-07
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 2e-07
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 7e-07
PRK14288369 PRK14288, PRK14288, chaperone protein DnaJ; Provis 1e-06
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 1e-06
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 1e-06
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 3e-06
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 3e-06
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 7e-06
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 7e-06
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 1e-04
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 7e-04
>gnl|CDD|222667 pfam14308, DnaJ-X, X-domain of DnaJ-containing Back     alignment and domain information 
 Score =  244 bits (624), Expect = 6e-80
 Identities = 77/194 (39%), Positives = 114/194 (58%)

Query: 119 VVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQ 178
             QKEREE+LA+ LR RL+ YV+G+K++F    E E   L   ++G+++L+TIG++Y  +
Sbjct: 1   EEQKEREEELAEKLRDRLSPYVEGDKDEFREKLEQEAEDLKMESFGLEILHTIGWVYENK 60

Query: 179 AAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTE 238
           A   LGKK  +LG+  I    ++KG  +KS     + A+      E+MKK     G  TE
Sbjct: 61  ANSFLGKKKTFLGISGIFTSVKDKGRSVKSTFNTLSSALDAQSTMEEMKKLEEKGGELTE 120

Query: 239 EELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK 298
           EEL E  +     ++ + W ++  DIE+TL  VC  VL+D +  K+E   RA+AL  LGK
Sbjct: 121 EELAEMEEKVTGKILAAAWAISKFDIESTLREVCDKVLKDKSVDKKERIKRAEALLILGK 180

Query: 299 IFQRAKSNNGSEGE 312
           IFQ+AK +   E E
Sbjct: 181 IFQKAKRSPEEEEE 194

IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known. Length = 204
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|185654 PTZ00475, PTZ00475, RESA-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 390
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 100.0
PF14308204 DnaJ-X: X-domain of DnaJ-containing 100.0
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
PTZ00475282 RESA-like protein; Provisional 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.9
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 99.88
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 99.82
PRK14288369 chaperone protein DnaJ; Provisional 99.79
PRK14296372 chaperone protein DnaJ; Provisional 99.78
PRK14286372 chaperone protein DnaJ; Provisional 99.77
PRK14287371 chaperone protein DnaJ; Provisional 99.75
PRK14285365 chaperone protein DnaJ; Provisional 99.75
PRK14279392 chaperone protein DnaJ; Provisional 99.74
PRK14282369 chaperone protein DnaJ; Provisional 99.74
PRK14276380 chaperone protein DnaJ; Provisional 99.74
PRK14297380 chaperone protein DnaJ; Provisional 99.73
PTZ00037421 DnaJ_C chaperone protein; Provisional 99.73
PRK14294366 chaperone protein DnaJ; Provisional 99.73
PRK14298377 chaperone protein DnaJ; Provisional 99.73
PRK14277386 chaperone protein DnaJ; Provisional 99.73
PHA03102153 Small T antigen; Reviewed 99.73
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.72
PRK14284391 chaperone protein DnaJ; Provisional 99.72
PRK14301373 chaperone protein DnaJ; Provisional 99.72
PRK14280376 chaperone protein DnaJ; Provisional 99.72
PRK14299291 chaperone protein DnaJ; Provisional 99.71
PRK14278378 chaperone protein DnaJ; Provisional 99.71
PRK14295389 chaperone protein DnaJ; Provisional 99.7
PRK14291382 chaperone protein DnaJ; Provisional 99.7
PRK10767371 chaperone protein DnaJ; Provisional 99.7
PRK14283378 chaperone protein DnaJ; Provisional 99.69
PRK14290365 chaperone protein DnaJ; Provisional 99.69
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.68
PRK14281397 chaperone protein DnaJ; Provisional 99.67
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.67
PRK14292371 chaperone protein DnaJ; Provisional 99.66
PRK14289386 chaperone protein DnaJ; Provisional 99.65
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.63
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.62
PRK14300372 chaperone protein DnaJ; Provisional 99.62
PRK14293374 chaperone protein DnaJ; Provisional 99.62
PRK10266306 curved DNA-binding protein CbpA; Provisional 99.61
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.55
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.5
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.47
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.42
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.34
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.3
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 99.3
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.26
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.21
PRK00294173 hscB co-chaperone HscB; Provisional 99.21
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 99.2
PRK05014171 hscB co-chaperone HscB; Provisional 99.2
PRK03578176 hscB co-chaperone HscB; Provisional 99.16
PRK01356166 hscB co-chaperone HscB; Provisional 99.07
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 99.0
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 98.99
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 98.95
PHA02624 647 large T antigen; Provisional 98.92
PTZ00100116 DnaJ chaperone protein; Provisional 98.76
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 98.51
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.4
PRK01773173 hscB co-chaperone HscB; Provisional 98.39
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.33
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 98.03
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 97.36
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 96.48
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 94.04
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 93.37
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 93.25
KOG0917 338 consensus Uncharacterized conserved protein [Funct 86.28
KOG0724335 consensus Zuotin and related molecular chaperones 82.65
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-62  Score=525.90  Aligned_cols=303  Identities=17%  Similarity=0.300  Sum_probs=258.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhhhc
Q 016408            1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFG   80 (390)
Q Consensus         1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~Fg   80 (390)
                      |+++||..+||+|||+||++||||||+++ .|.++|++|++||+|||||.+|+.||+||..|+..++++||..|| ++||
T Consensus       581 Vs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~iDP~~Ff-mlFg  658 (1136)
T PTZ00341        581 VGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIHPSIFY-LLAS  658 (1136)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCccCHHHHH-HHhh
Confidence            57999999999999999999999999964 788999999999999999999999999999999998999999877 7899


Q ss_pred             Cchhhhhhhhhhhhhhhhcc----ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHH
Q 016408           81 SELFEDYIGQLAMASVASLD----IFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVS  156 (390)
Q Consensus        81 ~~~f~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~q~~Re~~La~~L~~rL~~yv~g~~~~f~~~~~~Ea~  156 (390)
                      ++.|.+|+|.+.|++++...    +...+.....+.+++.|++.|++|+.+||.+|++||++||+|+. .|...++.||+
T Consensus       659 se~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~~QkeRE~kLA~~LkdRL~~YVdgd~-~w~~~~e~Ei~  737 (1136)
T PTZ00341        659 LEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQYQKEREAHISENLINILQPCIAGDR-KWDVPIIDKIE  737 (1136)
T ss_pred             hHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHHHHHH
Confidence            99999999999999765421    11111111235788999999999999999999999999999886 59999999999


Q ss_pred             HHhhccchHHHHHHHHHHHHHHHHHHhhhcccccCcchhHHhhhccchhHHHHHHHHHHHH-HHHHHHHHHHHhhhhc--
Q 016408          157 RLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAI-ALIQLQEDMKKQLSAE--  233 (390)
Q Consensus       157 ~L~~~sFG~~iL~~IG~vY~~~A~~~Lg~~~~~lGv~~~~~~~r~kg~~~k~~~~~a~~a~-~~~~~~~~~~k~~~~~--  233 (390)
                      .|+.+|||..|||+|||||.++|+.|||+.++  |+++++.+++.++.+++++++.+.+++ .++..++.+.+.....  
T Consensus       738 ~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~lkda~~t~eq~nki~~n~En  815 (1136)
T PTZ00341        738 ELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNILKEYFGNNEQINSITYNFEN  815 (1136)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhcc
Confidence            99999999999999999999999999998765  777889899999988888887777666 5555555554322100  


Q ss_pred             --------------CCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 016408          234 --------------GNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKI  299 (390)
Q Consensus       234 --------------~~~~eee~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~i  299 (390)
                                    .+++.+   + ....++++|.++|+++++|||+|||.||++||.|++||.++|++||+||++||.+
T Consensus       816 ~t~~~~nen~~k~i~~l~~e---e-e~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~ktRikRAeaLkiLG~i  891 (1136)
T PTZ00341        816 INLNEDNENGSKKILDLNHK---D-QKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKLANA  891 (1136)
T ss_pred             cccccccccccccccccCHH---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence                          011222   1 4566899999999999999999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCCCc
Q 016408          300 FQRAKSNNGSEGE  312 (390)
Q Consensus       300 f~~~~~~~~e~~~  312 (390)
                      |+++......+..
T Consensus       892 Mqk~a~~~K~~KK  904 (1136)
T PTZ00341        892 IEKYAGGGKKDKK  904 (1136)
T ss_pred             HHHHHhhcccccc
Confidence            9999877665443

>PF14308 DnaJ-X: X-domain of DnaJ-containing Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00475 RESA-like protein; Provisional Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0917 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 6e-08
3apq_A210 Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt 3e-07
3apo_A 780 Crystal Structure Of Full-Length Erdj5 Length = 780 3e-07
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 5e-07
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 1e-06
2ctw_A109 Solution Structure Of J-Domain From Mouse Dnaj Subf 1e-06
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 9e-06
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 1e-05
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 1e-05
2ej7_A82 Solution Structure Of The Dnaj Domain Of The Human 3e-05
2ctq_A112 Solution Structure Of J-Domain From Human Dnaj Subf 7e-05
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 8e-05
2dmx_A92 Solution Structure Of The J Domain Of Dnaj Homolog 2e-04
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 3e-04
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 3e-04
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 4e-04
2cug_A88 Solution Structure Of The J Domain Of The Pseudo Dn 9e-04
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure 
Iteration: 1

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 18 ARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 65
          A+K HPD N +DP A + F  L EAY+VLSD  +R+ YDAYG SG S+
Sbjct: 32 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG-SGPSS 78
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 Back     alignment and structure
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 Back     alignment and structure
>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112 Back     alignment and structure
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 Back     alignment and structure
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 2e-15
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 6e-15
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 7e-15
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 2e-14
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 4e-14
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 1e-13
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 2e-13
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 2e-13
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 2e-13
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 5e-13
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 7e-13
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 8e-13
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 1e-12
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 1e-12
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 2e-12
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 4e-12
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 8e-12
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 9e-12
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 1e-11
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 2e-11
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 3e-09
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 6e-09
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 9e-09
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 2e-08
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 7e-08
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 9e-08
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 3e-06
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 3e-05
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 1e-04
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 2e-04
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
 Score = 70.6 bits (173), Expect = 2e-15
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 18 ARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64
          A + HPDK+P +P A + FQ L +A ++L++   R  YD + +S +S
Sbjct: 45 ALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.75
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.74
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.73
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.72
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.71
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.7
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.69
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.69
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.68
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.68
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.68
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.67
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.67
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.67
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.64
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.62
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.62
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 99.6
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.57
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.56
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.56
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.53
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.53
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.5
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 99.49
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.47
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.46
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.44
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.43
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.4
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.33
2guz_A71 Mitochondrial import inner membrane translocase su 99.25
2guz_B65 Mitochondrial import inner membrane translocase su 97.65
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 88.16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
Probab=99.75  E-value=5.4e-19  Score=146.63  Aligned_cols=65  Identities=37%  Similarity=0.549  Sum_probs=61.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCC
Q 016408            1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST   65 (390)
Q Consensus         1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~   65 (390)
                      |+++||..+||+|||+|+++||||++++++++.++|++|++||+||+||.+|..||.+|..++..
T Consensus        11 v~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   75 (103)
T 1bq0_A           11 VSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ   75 (103)
T ss_dssp             SCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence            57899999999999999999999999977889999999999999999999999999999987664
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 390
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 2e-08
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 4e-08
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 2e-07
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 2e-06
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 4e-06
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 5e-06
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 9  QITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 63
          +I  A    A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +  
Sbjct: 19 EIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.81
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.74
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.66
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.63
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.44
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.42
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.41
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.4
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=3.3e-20  Score=144.03  Aligned_cols=64  Identities=38%  Similarity=0.557  Sum_probs=60.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408            1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS   64 (390)
Q Consensus         1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~   64 (390)
                      |+++||..|||+|||+++++||||+|++++.+.++|+.|++||+||+||.+|..||++|..++.
T Consensus        11 v~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_          11 VSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            6799999999999999999999999998889999999999999999999999999999988753
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure