Citrus Sinensis ID: 016432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MGKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSSK
Secondary Structure (PSIPRED)
cccccHHHHHEEEcccccccccccccccccccEEEEEEEcccHHHHHHHHHHcccccEEEEccccccccEEEEEEEEcccEEEEEEcccccccccccccccccccccccccHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHcccccccccEEcccccEEEEEEEcccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHcccccccEEcccccccccccEEEEEEEcccccEEEEEcccccccccccHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccHHHHHHHHHcccEEEccccEEEEEEEccccccccEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccccccccccccccccccEEEEEEccHHHHHHHHHHHccccHHHHcccccccccEEEEEEEcccEEEEEEccccccccccccccccccccccccHHHHHHHHHHccccHEEEEEEEccHHHHHHHHHHcccEEEccccccccEEEEEEEEEcccEEEEEEEEccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHcccEEEEEcHHHcccHHHHHHEEEEEccccEEEEcccccccccccHHHHHHHHHHcccccEEEEEEEcHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHccccccccHHHHHHcccEEEcccccEEEEEEcccccccccEHHHHEEEcccccc
Coil and Loop (DISEMBL)
MGKETAELLVKLVGFKnfvrqnpksdrfrvnrfhhvefwctdatntARRFSwglgmpivaksdlstgntvhasyllrsgdlrfvftapyspsisdaadagnssaslptfdhaACRSFAASHGLAARSIAVEvedadvafntsvahgakpssppvilDNLAVIAEVQLYGDVVLRYVSYkdkanhldflpgfeptdeissfpldygirrldhavgnvpelaPAVAYVKSFTGfhefaeftaedvgtsesglnsvvlanndemvllpmnepvfgtkrKSQIQTYLEhnegagvqhLALVSEDIFRTLREMRKrsgvggfefmpsppptyyknlknragdvltdeQIKQCEELgvlvdrddqgtllqiftkpvgDRYVHLLMLVTTFSFSSK
Flexible Loop (DISEMBL)
MGKETAELLVKLVgfknfvrqnpksdrfrvnRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVahgakpssppVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEftaedvgtseSGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHnegagvqhlaLVSEDIFRTLREMRKRsgvggfefmpspppTYYKNLKNRAGDVLTDEQIKQCEElgvlvdrddqGTLLQIFTKPVGDRYVHLLMLVTTFSFSSK
Low Complexity Region (SEG)
MGKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPsisdaadagnssasLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSSK
Disordered region (IsUnstruct)
******ELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPY******************TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHG*****PPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLR******************************DVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFS****
Disordered Region (DISOPRED)
***********LVGFKNFV*****SDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAP**********************HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVF******QIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFS**
Disordered Region (DISEMBL)
MGKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSSK
Disordered Region (DISPRO)
********LVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYS**************SLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSF***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	389	2.2.26 [Sep-21-2011]
P93836	445	4-hydroxyphenylpyruvate d	yes	no	0.933	0.815	0.758	1e-169
O23920	442	4-hydroxyphenylpyruvate d	N/A	no	0.917	0.807	0.760	1e-160
Q9ARF9	436	4-hydroxyphenylpyruvate d	N/A	no	0.917	0.818	0.736	1e-154
O48604	434	4-hydroxyphenylpyruvate d	N/A	no	0.910	0.815	0.614	1e-125
Q5EA20	393	4-hydroxyphenylpyruvate d	yes	no	0.827	0.819	0.359	3e-46
P32754	393	4-hydroxyphenylpyruvate d	yes	no	0.830	0.821	0.351	7e-46
Q872T7	412	4-hydroxyphenylpyruvate d	N/A	no	0.917	0.866	0.323	2e-44
P32755	393	4-hydroxyphenylpyruvate d	yes	no	0.845	0.837	0.337	3e-44
P49429	393	4-hydroxyphenylpyruvate d	yes	no	0.838	0.829	0.346	1e-43
Q9S2F4	381	4-hydroxyphenylpyruvate d	yes	no	0.835	0.853	0.357	4e-42

>sp|P93836|HPPD_ARATH 4-hydroxyphenylpyruvate dioxygenase OS=Arabidopsis thaliana GN=HPD PE=1 SV=2

 Score =  596 bits (1536), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 276/364 (75%), Positives = 318/364 (87%), Gaps = 1/364 (0%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 25  KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 84

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSPS+S       ++AS+P+FDH +CRSF +SHGL  R++A+
Sbjct: 85  HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 144

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK-DKANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 145 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 204

Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 205 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 264

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 265 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 324

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 325 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 384

Query: 370 VGDR 373
           +GDR
Sbjct: 385 LGDR 388

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 2EC: 7

>sp|O23920|HPPD_DAUCA 4-hydroxyphenylpyruvate dioxygenase OS=Daucus carota PE=2 SV=1

 Score =  564 bits (1453), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/364 (76%), Positives = 311/364 (85%), Gaps = 7/364 (1%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF NFVR NPKSD F V RFHH+EFWC DATNT+RRFSWGLGMP+VAKSDLSTGN+V
Sbjct: 24  KLVGFNNFVRANPKSDHFAVKRFHHIEFWCGDATNTSRRFSWGLGMPLVAKSDLSTGNSV 83

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYL+RS +L FVFTAPYSPS + ++     SA++P+F  +   SFAA HGLA R+IA+
Sbjct: 84  HASYLVRSANLSFVFTAPYSPSTTTSS----GSAAIPSFSASGFHSFAAKHGLAVRAIAL 139

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPG 190
           EV D   AF  SVA GA+P+S PV LD+ A +AEV+LYGDVVLR+VS+  +     FLPG
Sbjct: 140 EVADVAAAFEASVARGARPASAPVELDDQAWLAEVELYGDVVLRFVSFGREEGL--FLPG 197

Query: 191 FEPTDEISSFP-LDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           FE  +  +SFP LDYGIRRLDHAVGNV EL P V Y+K FTGFHEFAEFTAEDVGT ESG
Sbjct: 198 FEAVEGTASFPDLDYGIRRLDHAVGNVTELGPVVEYIKGFTGFHEFAEFTAEDVGTLESG 257

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNSVVLANN+EMVLLP+NEPV+GTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR
Sbjct: 258 LNSVVLANNEEMVLLPLNEPVYGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 317

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGFEFMPSPPPTYYKNLKNR GDVL+DEQIK+CE+LG+LVDRDDQGTLLQIFTKP
Sbjct: 318 KRSCLGGFEFMPSPPPTYYKNLKNRVGDVLSDEQIKECEDLGILVDRDDQGTLLQIFTKP 377

Query: 370 VGDR 373
           VGDR
Sbjct: 378 VGDR 381

Daucus carota (taxid: 4039)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q9ARF9|HPPD_SOLSC 4-hydroxyphenylpyruvate dioxygenase OS=Solenostemon scutellarioides PE=2 SV=1

 Score =  545 bits (1403), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/365 (73%), Positives = 311/365 (85%), Gaps = 8/365 (2%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVG KNFVR NP SD F V+RFHHVEFWC DATNT+RRFSWGLGMP+VAKSDLSTGN+ 
Sbjct: 17  KLVGHKNFVRSNPMSDHFPVHRFHHVEFWCGDATNTSRRFSWGLGMPLVAKSDLSTGNSA 76

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLLRSG+L FVFTAPYSPS+++      SSAS+PTF  +  R+F +SHGLA R++A+
Sbjct: 77  HASYLLRSGELSFVFTAPYSPSLAEP-----SSASIPTFSFSDHRAFTSSHGLAVRAVAI 131

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLP 189
           +V+ A  A++ +V+ GAKP SPPV+L D    IAEV LYGD VLR+VS    A+   FLP
Sbjct: 132 QVDSASSAYSAAVSRGAKPVSPPVVLADCETAIAEVHLYGDTVLRFVSCGSGADGW-FLP 190

Query: 190 GFEPT-DEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSES 248
           GFE   D +S   LDYGIRRLDHAVGNVP+L P V Y+K FTGFHEFAEFTAEDVGT+ES
Sbjct: 191 GFEVVGDGVSCQELDYGIRRLDHAVGNVPKLEPVVDYLKKFTGFHEFAEFTAEDVGTAES 250

Query: 249 GLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREM 308
           GLNSVVLANN+E VL P+NEPV+GTKRKSQIQTYL+HNEGAGVQHLAL++EDIFRTLREM
Sbjct: 251 GLNSVVLANNNENVLFPLNEPVYGTKRKSQIQTYLDHNEGAGVQHLALITEDIFRTLREM 310

Query: 309 RKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTK 368
           RKRS VGGFEFMPSPPPTYY+NLK+RAGDVL+DEQI++CE+LG+L+DRDDQGTLLQIFTK
Sbjct: 311 RKRSEVGGFEFMPSPPPTYYRNLKSRAGDVLSDEQIEECEKLGILIDRDDQGTLLQIFTK 370

Query: 369 PVGDR 373
           PVGDR
Sbjct: 371 PVGDR 375

Solenostemon scutellarioides (taxid: 4142)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|O48604|HPPD_HORVU 4-hydroxyphenylpyruvate dioxygenase OS=Hordeum vulgare PE=2 SV=1

 Score =  449 bits (1155), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/363 (61%), Positives = 272/363 (74%), Gaps = 9/363 (2%)

Query: 19  VRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS 78
           VR NP+SDRF    FHHVEFWC DA + A RF++ LG P+ A+SDLSTGN+ HAS LLRS
Sbjct: 28  VRFNPRSDRFHTLSFHHVEFWCADAASAAGRFAFALGAPLAARSDLSTGNSAHASQLLRS 87

Query: 79  GDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVA 138
           G L F+FTAPY+    +  DA  ++ASLP+F   A R F+A HG+A RS+A+ V DA  A
Sbjct: 88  GSLAFLFTAPYA----NGCDA--ATASLPSFSADAARRFSADHGIAVRSVALRVADAAEA 141

Query: 139 FNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEIS 198
           F  S   GA+P+  PV L      AEV+LYGDVVLR+VS+ D  + + FLPGFE      
Sbjct: 142 FRASRRRGARPAFAPVDLGRGFAFAEVELYGDVVLRFVSHPDGTD-VPFLPGFEGVTNPD 200

Query: 199 SFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN 258
           +  +DYG+ R DH VGNVPELAPA AY+  FTGFHEFAEFTAEDVGT+ESGLNSVVLANN
Sbjct: 201 A--VDYGLTRFDHVVGNVPELAPAAAYIAGFTGFHEFAEFTAEDVGTTESGLNSVVLANN 258

Query: 259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE 318
            E VLLP+NEPV GTKR+SQIQT+LEH+ G GVQH+A+ S D+ RTLR+MR RS +GGF+
Sbjct: 259 SEGVLLPLNEPVHGTKRRSQIQTFLEHHGGPGVQHIAVASSDVLRTLRKMRARSAMGGFD 318

Query: 319 FMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLL 378
           F+P P P YY+ ++  AGDVL++ QIK+C+ELGVLVDRDDQG LLQIFTKPVGDR    L
Sbjct: 319 FLPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFL 378

Query: 379 MLV 381
            ++
Sbjct: 379 EMI 381

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q5EA20|HPPD_BOVIN 4-hydroxyphenylpyruvate dioxygenase OS=Bos taurus GN=HPD PE=2 SV=3

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 181/362 (50%), Gaps = 40/362 (11%)

Query: 24  KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
           K +R R   FH V FW  +A   A  +   LG   +A   L TG+    S++++ G + F
Sbjct: 10  KPERGRFLHFHSVTFWVGNAKQAASYYCSKLGFEPLAYKGLETGSREVVSHVVKQGQIVF 69

Query: 84  VFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
           VF++  +P   +  D                      HG   + IA EVED D     + 
Sbjct: 70  VFSSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCDYIVQKAR 111

Query: 144 AHGAKPSSPPVI-LDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFEP----TD 195
             GAK    P +  D L  +  A +Q YGD     V   +K N+   FLPGFE       
Sbjct: 112 ERGAKIVREPWVEQDKLGKVKFAVLQTYGDTTHTLV---EKMNYTGRFLPGFEAPPFMDP 168

Query: 196 EISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSV 253
           ++S  P    +  +DH VGN P  E+  A  +      FH F       V T  S L SV
Sbjct: 169 QLSKLP-SCSLEIIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSV 227

Query: 254 VLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSG 313
           V+AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL ++DI   +R +R+R  
Sbjct: 228 VVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTKDIITAIRHLRER-- 284

Query: 314 VGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVG 371
             G EF+ + P TYYK L+   +   +   E I   EEL +LVD D++G LLQIFTKP+ 
Sbjct: 285 --GVEFL-AVPSTYYKQLREKLKMAKIRVKENIDILEELKILVDYDEKGYLLQIFTKPMQ 341

Query: 372 DR 373
           DR
Sbjct: 342 DR 343

Key enzyme in the degradation of tyrosine.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|P32754|HPPD_HUMAN 4-hydroxyphenylpyruvate dioxygenase OS=Homo sapiens GN=HPD PE=1 SV=2

 Score =  184 bits (468), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/361 (35%), Positives = 178/361 (49%), Gaps = 38/361 (10%)

Query: 24  KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
           K +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + F
Sbjct: 10  KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVF 69

Query: 84  VFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
           V ++  +P   +  D                      HG   + IA EVED D     + 
Sbjct: 70  VLSSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCDYIVQKAR 111

Query: 144 AHGAKPSSPPVI-LDNLAVI--AEVQLYGDVVLRYVSYKDKANHL-DFLPGFEP---TDE 196
             GAK    P +  D    +  A +Q YGD     V   +K N++  FLPG+E     D 
Sbjct: 112 ERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKMNYIGQFLPGYEAPAFMDP 168

Query: 197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVV 254
           +        +  +DH VGN P  E+  A  +      FH F       V T  S L S+V
Sbjct: 169 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIV 228

Query: 255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGV 314
           +AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+R   
Sbjct: 229 VANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER--- 284

Query: 315 GGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGD 372
            G EF+ S P TYYK L+   +   +   E I   EEL +LVD D++G LLQIFTKPV D
Sbjct: 285 -GLEFL-SVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQD 342

Query: 373 R 373
           R
Sbjct: 343 R 343

Key enzyme in the degradation of tyrosine.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q872T7|HPPD_NEUCR 4-hydroxyphenylpyruvate dioxygenase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B23G1.170 PE=3 SV=1

 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 192/389 (49%), Gaps = 32/389 (8%)

Query: 14  GFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHAS 73
           G  ++  Q+ +   F  N + HV +W  +A   A  ++   G   +A   L TG+   AS
Sbjct: 15  GTPDYALQSSEVSNF--NGYDHVTWWVGNAKQAASYYNTVFGFKTLAYRGLETGSRYFAS 72

Query: 74  YLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVE 133
           Y++ + D+RFVFT+P         +   S A         C      HG A + +A EV+
Sbjct: 73  YVVGNADVRFVFTSPIRSQKCLPEEEPISDADRKLLQE--CHEHLEKHGDAVKDVAFEVD 130

Query: 134 DADVAFNTSVAHGAKPSSPPVILDNL----AVIAEVQLYGDVVLRYVSYKDKANHLDFLP 189
           + D  F+ +VA GA     P  L +        A ++ YGD     +S  D      FLP
Sbjct: 131 NVDGVFHKAVAAGADVVQEPTTLTDKMHGSVRTAVIRTYGDTTHTLISRADYNG--PFLP 188

Query: 190 GFE------PTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAE 241
           GF        T ++ S PL     R+DH VGN    E+  A A+ +    FH F      
Sbjct: 189 GFRTAAPSSATVQLPSVPL----ARIDHCVGNQDWNEMVSACAFYEQCLSFHRFWSVDDS 244

Query: 242 DVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDI 301
            + T  S LNS+V+A+ + +V +P+NEP  G K+KSQI+ Y+  N GAGVQH+AL++ DI
Sbjct: 245 QICTEFSALNSIVMASENNLVKMPINEPAPG-KKKSQIEEYVVFNSGAGVQHIALLTPDI 303

Query: 302 FRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQ----CEELGVLVDRD 357
             T+  MR R    G EF+ + P TYY  ++ R        ++K+     ++L +L+D D
Sbjct: 304 ISTVSAMRAR----GVEFI-NVPSTYYDTIRQRLKTEKRGWELKEDLDTIQKLNILIDYD 358

Query: 358 DQGTLLQIFTKPVGDRYVHLLMLVTTFSF 386
           + G LLQ+FTKP+ DR    + ++   +F
Sbjct: 359 EGGYLLQLFTKPLMDRPTVFIEIIQRNNF 387

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|P32755|HPPD_RAT 4-hydroxyphenylpyruvate dioxygenase OS=Rattus norvegicus GN=Hpd PE=1 SV=3

 Score =  179 bits (455), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 183/367 (49%), Gaps = 38/367 (10%)

Query: 18  FVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR 77
           +  + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++
Sbjct: 4   YSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK 63

Query: 78  SGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADV 137
            G + FV  +  +P   +  D                      HG   + IA EVED + 
Sbjct: 64  QGKIVFVLCSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCEH 105

Query: 138 AFNTSVAHGAKPSSPPVILDNL---AVIAEVQLYGDVVLRYVSYKDKANHLD-FLPGFE- 192
               +   GAK    P + ++       A +Q YGD     V   +K N+   FLPGFE 
Sbjct: 106 IVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEA 162

Query: 193 PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSES 248
           PT + +  P      +  +DH VGN P  E+  A  +      FH F       V T  S
Sbjct: 163 PTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYS 222

Query: 249 GLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREM 308
            L S+V+AN +E + +P+NEP  G ++KSQIQ Y+++N GAGVQH+AL +EDI  T+R +
Sbjct: 223 SLRSIVVANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHL 281

Query: 309 RKRSGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF 366
           R+R    G EF+ + P +YY+ L+   +   +   E +   EEL +LVD D++G LLQIF
Sbjct: 282 RER----GMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIF 336

Query: 367 TKPVGDR 373
           TKP+ DR
Sbjct: 337 TKPMQDR 343

Key enzyme in the degradation of tyrosine.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|P49429|HPPD_MOUSE 4-hydroxyphenylpyruvate dioxygenase OS=Mus musculus GN=Hpd PE=1 SV=3

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 181/364 (49%), Gaps = 38/364 (10%)

Query: 21  QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD 80
           + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G 
Sbjct: 7   KGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYRGLETGSREVVSHVIKQGK 66

Query: 81  LRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFN 140
           + FV  +  +P   +  D                      HG   + IA EVED D    
Sbjct: 67  IVFVLCSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCDHIVQ 108

Query: 141 TSVAHGAK-PSSPPVILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE-PTD 195
            +   GAK    P V  D    +  A +Q YGD     V   +K N+   FLPGFE PT 
Sbjct: 109 KARERGAKIVREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEAPTY 165

Query: 196 EISSFPL--DYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLN 251
           + +  P      +  +DH VGN P  E+  A  +      FH F       V T  S L 
Sbjct: 166 KDTLLPKLPRCNLEIIDHIVGNQPDQEMQSASEWYLKNLQFHRFWSVDDTQVHTEYSSLR 225

Query: 252 SVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKR 311
           S+V+ N +E + +P+NEP  G ++KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+R
Sbjct: 226 SIVVTNYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER 284

Query: 312 SGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
               G EF+ + P +YYK L+   ++  +   E +   EEL +LVD D++G LLQIFTKP
Sbjct: 285 ----GTEFL-AAPSSYYKLLRENLKSAKIQVKESMDVLEELHILVDYDEKGYLLQIFTKP 339

Query: 370 VGDR 373
           + DR
Sbjct: 340 MQDR 343

Key enzyme in the degradation of tyrosine.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

>sp|Q9S2F4|HPPD_STRCO 4-hydroxyphenylpyruvate dioxygenase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=hpd PE=3 SV=1

 Score =  172 bits (436), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 171/355 (48%), Gaps = 30/355 (8%)

Query: 24  KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
           ++D F V     V F   +A   A  +S   GM +VA S    G+   ASY+L SG  RF
Sbjct: 14  QADPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMKLVAYSGPENGSRETASYVLESGSARF 73

Query: 84  VFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
           VFT+   PS     D G   A              A HG     +A+EV DA  A   +V
Sbjct: 74  VFTSVIKPS----TDWGTFLA-----------QHVAEHGDGVVDLAIEVPDARAAHAYAV 118

Query: 144 AHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSF 200
            HGA+  + P  + +     V+A +  YG+   R+   +       +LPG+     + + 
Sbjct: 119 EHGARSLAEPHEVKDEHGTVVLAAIATYGET--RHTLVERTGYDGPYLPGYVAAKPMVAP 176

Query: 201 PLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN 258
           P     + +DH VGNV    +   V +     GF    EF  +D+ T  S L S V+A+ 
Sbjct: 177 PAQRVFQAVDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG 236

Query: 259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE 318
              V  P+NEP    K+KSQI  YLE   GAGVQH+AL + DI  T+R MR      G E
Sbjct: 237 TLKVKFPINEPAI-AKKKSQIDEYLEFYGGAGVQHIALNTNDIVATVRAMR----AAGVE 291

Query: 319 FMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           F+ + P +YY  L   AG+  T   +    EL +LVDRD+ G LLQIFTKPV DR
Sbjct: 292 FLDT-PDSYYDTLGEWAGE--TRVPVDVLRELKILVDRDEDGYLLQIFTKPVQDR 343

Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (taxid: 100226)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
255558690	441	4-hydroxyphenylpyruvate dioxygenase, put	0.958	0.845	0.805	0.0
309260073	432	p-hydroxyphenylpyruvate dioxygenase [Man	0.946	0.851	0.816	1e-180
224062651	444	predicted protein [Populus trichocarpa]	0.979	0.858	0.772	1e-175
449453770	455	PREDICTED: 4-hydroxyphenylpyruvate dioxy	0.976	0.835	0.753	1e-174
219842162	445	4-hydroxyphenylpyruvate dioxygenase [Hev	0.958	0.838	0.761	1e-173
449504200	455	PREDICTED: 4-hydroxyphenylpyruvate dioxy	0.976	0.835	0.748	1e-172
225001452	446	4-hydroxyphenylpyruvate dioxygenase [Lac	0.969	0.845	0.757	1e-171
297848936	445	4-hydroxyphenylpyruvate dioxygenase [Ara	0.933	0.815	0.766	1e-168
30679736	473	4-hydroxyphenylpyruvate dioxygenase [Ara	0.933	0.767	0.758	1e-168
22530912	473	4-hydroxyphenylpyruvate dioxygenase HPD	0.933	0.767	0.758	1e-168

>gi|255558690|ref|XP_002520369.1| 4-hydroxyphenylpyruvate dioxygenase, putative [Ricinus communis] gi|223540416|gb|EEF41985.1| 4-hydroxyphenylpyruvate dioxygenase, putative [Ricinus communis]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/380 (80%), Positives = 337/380 (88%), Gaps = 7/380 (1%)

Query: 1   MGKE------TAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGL 54
           MGKE      T E   KLVGF NFVR NPKSDRF+V RFHHVEFWCTDATNTARRFSWGL
Sbjct: 1   MGKENDVVSSTPEQGFKLVGFSNFVRANPKSDRFKVKRFHHVEFWCTDATNTARRFSWGL 60

Query: 55  GMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNS-SASLPTFDHAA 113
           GMPIVAKSDLSTGN  HASYLLRSGDL F+FTAPYSPSI+   +  ++ +AS+PTF H  
Sbjct: 61  GMPIVAKSDLSTGNVTHASYLLRSGDLNFLFTAPYSPSIAAMENLSHTATASIPTFSHET 120

Query: 114 CRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVL 173
           CR F+A HGLA R+IA+EVEDA++AF TS +HGAKPS+ P++LDN AVIAEV LYGDVVL
Sbjct: 121 CRYFSAKHGLAVRAIAIEVEDAEIAFRTSASHGAKPSAEPILLDNRAVIAEVHLYGDVVL 180

Query: 174 RYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFH 233
           RY+SYK++ ++ +FLP FEP DE +SFP+DYGIRRLDHAVGNVPELAP V+YVK FTGFH
Sbjct: 181 RYISYKNEGSNFEFLPRFEPVDEATSFPVDYGIRRLDHAVGNVPELAPVVSYVKQFTGFH 240

Query: 234 EFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQH 293
           EFAEFT EDVGTSESGLNSVVLANN+E VL+PMNEPVFGTKRKSQIQTYLEHNEGAGVQH
Sbjct: 241 EFAEFTTEDVGTSESGLNSVVLANNEETVLIPMNEPVFGTKRKSQIQTYLEHNEGAGVQH 300

Query: 294 LALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVL 353
           LAL SEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVL+DEQIK+CEELG+L
Sbjct: 301 LALASEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLSDEQIKECEELGIL 360

Query: 354 VDRDDQGTLLQIFTKPVGDR 373
           VDRDDQGTLLQIFTKPVGDR
Sbjct: 361 VDRDDQGTLLQIFTKPVGDR 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|309260073|gb|ADO62712.1| p-hydroxyphenylpyruvate dioxygenase [Mangifera indica]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/376 (81%), Positives = 335/376 (89%), Gaps = 8/376 (2%)

Query: 1   MGKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVA 60
           MGK+      +LVGF NFVR NPKSDRF+V +FHH+EFWCTDATN ARRFSWGLGMPI+A
Sbjct: 1   MGKQDGSF--ELVGFSNFVRHNPKSDRFKVKKFHHIEFWCTDATNVARRFSWGLGMPIIA 58

Query: 61  KSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAAS 120
           KSDLSTGN VHASYLLRSG+L FVFTAPYSPSIS   D   ++AS+PTF + +CR+FA S
Sbjct: 59  KSDLSTGNMVHASYLLRSGELNFVFTAPYSPSIS--GDDYKNTASIPTFSYDSCRAFAVS 116

Query: 121 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD 180
           HGLA RS+ V+VEDA++AF TS AHGAKP S P ILDN AVI+EV LYGDVVLRYVSYK 
Sbjct: 117 HGLAVRSVGVDVEDAEIAFTTSAAHGAKPVSSPRILDNRAVISEVHLYGDVVLRYVSYK- 175

Query: 181 KANHLD---FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAE 237
             N+ D   FLPGFE TDEI+SFPLDYGIRRLDHAVGNVPEL PAV+YVK FTGFHEFAE
Sbjct: 176 SGNNFDSCLFLPGFERTDEITSFPLDYGIRRLDHAVGNVPELGPAVSYVKGFTGFHEFAE 235

Query: 238 FTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALV 297
           FTAEDVGTSESGLNSVVLA+NDEMVLLP+NEPVFGTKRKSQIQTYLEHNEGAG+QHLALV
Sbjct: 236 FTAEDVGTSESGLNSVVLASNDEMVLLPLNEPVFGTKRKSQIQTYLEHNEGAGLQHLALV 295

Query: 298 SEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD 357
           SEDIF TLREM+KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIK+CEELG+LVDRD
Sbjct: 296 SEDIFGTLREMKKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKECEELGILVDRD 355

Query: 358 DQGTLLQIFTKPVGDR 373
           +QGTLLQIFTKPVGDR
Sbjct: 356 EQGTLLQIFTKPVGDR 371

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062651|ref|XP_002300867.1| predicted protein [Populus trichocarpa] gi|222842593|gb|EEE80140.1| predicted protein [Populus trichocarpa]

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/391 (77%), Positives = 339/391 (86%), Gaps = 10/391 (2%)

Query: 1   MGKE--TAELL--VKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGM 56
           MGKE  T+E     KL GF +FVR NP+SDRF+VNRFHH+EFWCTDATNTARRFSWGLGM
Sbjct: 1   MGKENETSETPGGFKLGGFSSFVRANPRSDRFKVNRFHHIEFWCTDATNTARRFSWGLGM 60

Query: 57  PIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNS-SASLPTFDHAACR 115
           PIVAKSDLSTGN  HASYLLRSGDL F+FTAPYSPSI+   +  ++ +AS+PTF+H   R
Sbjct: 61  PIVAKSDLSTGNATHASYLLRSGDLNFLFTAPYSPSIASMDNLSHTATASIPTFNHETSR 120

Query: 116 SFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRY 175
            F+A HGLA R+IA+EV+DA++AF TSVAHGAKPS+ PV+LDN AV+AEV LYGDVVLRY
Sbjct: 121 GFSAKHGLAVRAIAIEVDDAELAFTTSVAHGAKPSASPVLLDNRAVVAEVHLYGDVVLRY 180

Query: 176 VSYKD-KANHLD----FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFT 230
           VSY++ +++  D    FLP FE  +  SSFPLDYGIRRLDHAVGNVPELA AV YVK FT
Sbjct: 181 VSYRNSESDDSDPGSWFLPKFEAVEAASSFPLDYGIRRLDHAVGNVPELAQAVNYVKEFT 240

Query: 231 GFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG 290
           GFHEFAEFTAEDVGTSESGLNSVVLANN+E VL PMNEPVFGTKRKSQIQTYLEHNEGAG
Sbjct: 241 GFHEFAEFTAEDVGTSESGLNSVVLANNEETVLFPMNEPVFGTKRKSQIQTYLEHNEGAG 300

Query: 291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEEL 350
           +QHLALVSEDIFRTLREMRKRS VGGFEFMPSPPPTYYKNLK+RAGDVL+DEQIK+CEEL
Sbjct: 301 LQHLALVSEDIFRTLREMRKRSAVGGFEFMPSPPPTYYKNLKSRAGDVLSDEQIKECEEL 360

Query: 351 GVLVDRDDQGTLLQIFTKPVGDRYVHLLMLV 381
           G+LVDRDDQGTLLQIFTKPVGDR    + ++
Sbjct: 361 GILVDRDDQGTLLQIFTKPVGDRPTMFIEII 391

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453770|ref|XP_004144629.1| PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Cucumis sativus]

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 293/389 (75%), Positives = 335/389 (86%), Gaps = 9/389 (2%)

Query: 2   GKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAK 61
           G   ++   +L GF NF+R NPKSDRF+V RFHH+EFWCTDATN ARRFSWGLGM IVAK
Sbjct: 18  GATASQSEFELQGFDNFIRTNPKSDRFKVKRFHHIEFWCTDATNVARRFSWGLGMQIVAK 77

Query: 62  SDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAAD-AGNSSASLPTFDHAACRSFAAS 120
           SDLSTGN  HASYLLRSG L F+FTAPYSPSI+ A +    S+AS+P+FDH+ CRSF+ +
Sbjct: 78  SDLSTGNMTHASYLLRSGHLCFLFTAPYSPSIAAAQNLTPASTASIPSFDHSVCRSFSGT 137

Query: 121 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD 180
           HG  AR+IA+EVEDA++AF TSVAHGAKPS PP++L+N AV++EV LYGDVVLRY+SYK+
Sbjct: 138 HGFGARAIALEVEDAEIAFRTSVAHGAKPSCPPIVLENRAVLSEVHLYGDVVLRYISYKN 197

Query: 181 KA------NHLD--FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGF 232
                   N  D  FLP FE  +E +SFPLD+GIRRLDHAVGNVPEL PAV+Y+K FTGF
Sbjct: 198 PVSGDNGENKPDEWFLPKFEAMEETASFPLDFGIRRLDHAVGNVPELGPAVSYLKGFTGF 257

Query: 233 HEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQ 292
           HEFAEFTAEDVGTSESGLNS+VLANN+EMVLLP+NEPVFGTKRKSQIQTYLEHNEGAGVQ
Sbjct: 258 HEFAEFTAEDVGTSESGLNSMVLANNEEMVLLPINEPVFGTKRKSQIQTYLEHNEGAGVQ 317

Query: 293 HLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGV 352
           HLAL+SEDIFRTLREMRKRS VGGFEFMPSPPPTYYKNLK+RAGDVLTDEQIK+CEELG+
Sbjct: 318 HLALMSEDIFRTLREMRKRSSVGGFEFMPSPPPTYYKNLKSRAGDVLTDEQIKECEELGI 377

Query: 353 LVDRDDQGTLLQIFTKPVGDRYVHLLMLV 381
           LVD+DDQGTLLQIFTKPVGDR    + ++
Sbjct: 378 LVDKDDQGTLLQIFTKPVGDRPTIFIEII 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|219842162|dbj|BAH10638.1| 4-hydroxyphenylpyruvate dioxygenase [Hevea brasiliensis]

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 294/386 (76%), Positives = 331/386 (85%), Gaps = 13/386 (3%)

Query: 1   MGKETAELL-----VKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLG 55
           MGKE   +       KL+GF NFVR NP+SD F+V RFHHVEFWCTDATNTA RFSWGLG
Sbjct: 1   MGKENDSVPSSAPGFKLLGFSNFVRTNPRSDLFKVKRFHHVEFWCTDATNTACRFSWGLG 60

Query: 56  MPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAAD-AGNSSASLPTFDHAAC 114
           MP VAKSDLSTGN  HASYLLRSGDL F+FTAPYSP+I+   + +  ++AS+PTF H AC
Sbjct: 61  MPFVAKSDLSTGNVTHASYLLRSGDLSFLFTAPYSPTIASMENFSHTATASIPTFSHEAC 120

Query: 115 RSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLR 174
           R+F+A HGL  R+IA+EVEDA++A+NTSVA GA P   P+ LDN AV+AEV LYGDVVLR
Sbjct: 121 RNFSAKHGLGVRAIAIEVEDAEIAYNTSVARGALPMGGPITLDNRAVVAEVHLYGDVVLR 180

Query: 175 YVSYKDKANHLD-------FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVK 227
           Y+SYK+   +L+       FLP FE  DE SSFPLDYGIRRLDHAVGNVPELAPAV+YVK
Sbjct: 181 YISYKNSNPNLNDSSPDSWFLPKFESVDEASSFPLDYGIRRLDHAVGNVPELAPAVSYVK 240

Query: 228 SFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE 287
            FTGFHEFAEFTAEDVGTSESGLNS+VLANN++ VLLP+NEPVFGTKRKSQIQTYLEHNE
Sbjct: 241 EFTGFHEFAEFTAEDVGTSESGLNSLVLANNEDTVLLPLNEPVFGTKRKSQIQTYLEHNE 300

Query: 288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQC 347
           GAG+QHLALVSEDIF+TLREMR+RSGVGGF+FMPSPPPTYY+NLKNR GDVLTDEQIK+C
Sbjct: 301 GAGLQHLALVSEDIFKTLREMRRRSGVGGFDFMPSPPPTYYRNLKNRVGDVLTDEQIKEC 360

Query: 348 EELGVLVDRDDQGTLLQIFTKPVGDR 373
           EELG+LVDRDDQGTLLQIFTKPVGDR
Sbjct: 361 EELGILVDRDDQGTLLQIFTKPVGDR 386

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449504200|ref|XP_004162282.1| PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Cucumis sativus]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/389 (74%), Positives = 334/389 (85%), Gaps = 9/389 (2%)

Query: 2   GKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAK 61
           G   ++   +L GF NF+R NPKSDRF+V RFHH+EFWCTDATN ARRFSWGLGM IVAK
Sbjct: 18  GATASQSEFELQGFDNFIRTNPKSDRFKVKRFHHIEFWCTDATNVARRFSWGLGMQIVAK 77

Query: 62  SDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAAD-AGNSSASLPTFDHAACRSFAAS 120
           SDLSTGN  HASYLLRSG L F+FTAPYSPSI+ A +    S+AS+P+FDH+ CRSF+ +
Sbjct: 78  SDLSTGNMTHASYLLRSGHLCFLFTAPYSPSIAAAQNLTPASTASIPSFDHSVCRSFSGT 137

Query: 121 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD 180
           HG  AR+IA+EVEDA++AF TSVAHGAKPS PP++L+N AV++EV LYGDVVLRY+SYK+
Sbjct: 138 HGFGARAIALEVEDAEIAFRTSVAHGAKPSCPPIVLENRAVLSEVHLYGDVVLRYISYKN 197

Query: 181 KA------NHLD--FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGF 232
                   N  D  FLP FE  +E +SFPLD+GIRRLDHAVGNVPEL PAV+Y+K FTGF
Sbjct: 198 PVSGDNGENKPDEWFLPKFEAMEETASFPLDFGIRRLDHAVGNVPELGPAVSYLKGFTGF 257

Query: 233 HEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQ 292
           HEFAEFTAEDVGTSESGLNS+VLAN++EMVLLP+NEPVFGTKRKSQIQTYLEHNEGAGVQ
Sbjct: 258 HEFAEFTAEDVGTSESGLNSMVLANSEEMVLLPINEPVFGTKRKSQIQTYLEHNEGAGVQ 317

Query: 293 HLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGV 352
           HLAL+SEDIFRTLREMRKRS VGGFEFMPSPPPTYYKNLK+RAGDV TDEQIK+CEELG+
Sbjct: 318 HLALMSEDIFRTLREMRKRSSVGGFEFMPSPPPTYYKNLKSRAGDVPTDEQIKECEELGI 377

Query: 353 LVDRDDQGTLLQIFTKPVGDRYVHLLMLV 381
           LVD+DDQGTLLQIFTKPVGDR    + ++
Sbjct: 378 LVDKDDQGTLLQIFTKPVGDRPTIFIEII 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225001452|gb|ACN78586.1| 4-hydroxyphenylpyruvate dioxygenase [Lactuca sativa]

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/384 (75%), Positives = 330/384 (85%), Gaps = 7/384 (1%)

Query: 2   GKETAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAK 61
           G++T     KLVGF NF+R NP SD+F V RFHH+ FWC+DATNTARRFSWGLGMPIV K
Sbjct: 12  GEQTGSAF-KLVGFNNFIRTNPMSDKFSVKRFHHIGFWCSDATNTARRFSWGLGMPIVQK 70

Query: 62  SDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASH 121
           SDLSTGN  HASYLLRSG L F+FTAPYSPSIS A  +  ++AS+P+F H  CR+F ASH
Sbjct: 71  SDLSTGNATHASYLLRSGQLNFLFTAPYSPSISSAVTS--TTASIPSFSHTDCRNFTASH 128

Query: 122 GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVSYKD 180
           GLA RS+A+EVEDA++AF+ SV+HGAKPSS P+ L +N  V++EV+LYGDVVLRY+SYK+
Sbjct: 129 GLAVRSVAIEVEDAEIAFSVSVSHGAKPSSSPITLGNNDVVLSEVKLYGDVVLRYISYKN 188

Query: 181 KA--NHLDFLPGFEPTDEISSFP-LDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAE 237
                  +FLPGFEP ++ SSFP LDYGIRRLDHAVGNVPELAPAV YVKS TGFHEFAE
Sbjct: 189 PNFDGISNFLPGFEPVEKTSSFPDLDYGIRRLDHAVGNVPELAPAVDYVKSITGFHEFAE 248

Query: 238 FTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALV 297
           FTAEDVGTSESGLNSVVLA N EMVL+PMNEPV+GTKRKSQIQTYLEHNEGAGVQHLAL 
Sbjct: 249 FTAEDVGTSESGLNSVVLACNSEMVLIPMNEPVYGTKRKSQIQTYLEHNEGAGVQHLALA 308

Query: 298 SEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD 357
           SEDIFRTLREMRKRSG+GG EFMPSPPPTYY+NLKNR GDVLTDE+IK+CEELG+LVDRD
Sbjct: 309 SEDIFRTLREMRKRSGIGGLEFMPSPPPTYYRNLKNRVGDVLTDEEIKECEELGILVDRD 368

Query: 358 DQGTLLQIFTKPVGDRYVHLLMLV 381
           DQGTLLQIFTKPVGDR    + ++
Sbjct: 369 DQGTLLQIFTKPVGDRPTIFIEII 392

Source: Lactuca sativa

Species: Lactuca sativa

Genus: Lactuca

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848936|ref|XP_002892349.1| 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis lyrata subsp. lyrata] gi|297338191|gb|EFH68608.1| 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis lyrata subsp. lyrata]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/364 (76%), Positives = 316/364 (86%), Gaps = 1/364 (0%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V  FHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 25  KLVGFSKFVRKNPKSDKFKVKCFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 84

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSPS S        +AS+P+FDH +CRSF +SHGL  R++A+
Sbjct: 85  HASYLLTSGDLRFLFTAPYSPSFSAGEIKPTMTASIPSFDHVSCRSFFSSHGLGVRAVAI 144

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD-KANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++LD    IAEV+LYGDVVLRYVSYK    +  +FLP
Sbjct: 145 EVEDAESAFSISVANGAIPSSPPIVLDESVTIAEVKLYGDVVLRYVSYKGGNTDKSEFLP 204

Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFEP ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 205 GFEPVEDTSSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 264

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLANNDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 265 LNSAVLANNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 324

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+DEQIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 325 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDEQIKECEELGILVDRDDQGTLLQIFTKP 384

Query: 370 VGDR 373
           +GDR
Sbjct: 385 LGDR 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30679736|ref|NP_172144.2| 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana] gi|6692679|gb|AAF24813.1|AC007592_6 F12K11.9 [Arabidopsis thaliana] gi|332189885|gb|AEE28006.1| 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/364 (75%), Positives = 318/364 (87%), Gaps = 1/364 (0%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 53  KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 112

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSPS+S       ++AS+P+FDH +CRSF +SHGL  R++A+
Sbjct: 113 HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 172

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK-DKANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 173 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 232

Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 233 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 292

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 293 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 352

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 353 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 412

Query: 370 VGDR 373
           +GDR
Sbjct: 413 LGDR 416

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22530912|gb|AAM96960.1| 4-hydroxyphenylpyruvate dioxygenase HPD [Arabidopsis thaliana]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/364 (75%), Positives = 317/364 (87%), Gaps = 1/364 (0%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 53  KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 112

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSPS+S       ++AS+P+FDH +CRSF +SHGL  R++A+
Sbjct: 113 HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 172

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK-DKANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 173 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 232

Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA DVGT+ESG
Sbjct: 233 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTANDVGTAESG 292

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 293 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 352

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 353 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 412

Query: 370 VGDR 373
           +GDR
Sbjct: 413 LGDR 416

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
TIGR_CMR|BA_0240	372	BA_0240 "4-hydroxyphenylpyruva	0.629	0.658	0.407	2.9e-50
UNIPROTKB|Q5EA20	393	HPD "4-hydroxyphenylpyruvate d	0.825	0.816	0.374	8.1e-44
UNIPROTKB|P32754	393	HPD "4-hydroxyphenylpyruvate d	0.827	0.819	0.364	2.8e-43
UNIPROTKB|F6X9H7	393	HPD "4-hydroxyphenylpyruvate d	0.827	0.819	0.361	4.5e-43
RGD|61974	393	Hpd "4-hydroxyphenylpyruvate d	0.843	0.834	0.353	8.4e-42
UNIPROTKB|P32755	393	Hpd "4-hydroxyphenylpyruvate d	0.843	0.834	0.353	8.4e-42
MGI|MGI:96213	393	Hpd "4-hydroxyphenylpyruvic ac	0.835	0.826	0.356	2.2e-41
UNIPROTKB|Q96X22	419	HPD4 "4-hydroxyphenylpyruvate	0.835	0.775	0.325	6.8e-40
ZFIN|ZDB-GENE-040808-62	393	hpdb "4-hydroxyphenylpyruvate	0.850	0.842	0.346	6.8e-40
UNIPROTKB|F1NVJ0	393	HPD "4-hydroxyphenylpyruvate d	0.627	0.620	0.371	7.4e-40

TIGR_CMR|BA_0240 BA_0240 "4-hydroxyphenylpyruvate dioxygenase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 448 (162.8 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
 Identities = 106/260 (40%), Positives = 150/260 (57%)

Query:   117 FAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL-DNLAVI--AEVQLYGDVVL 173
             F  +HG   + +A+ V+D D A++ +V  GA   +PPV L D    +  A +  YGD + 
Sbjct:    87 FVKTHGDGVKDVALLVDDVDKAYSEAVKRGAVAIAPPVELTDENGTLKKAVIGTYGDTIH 146

Query:   174 RYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFH 233
               V  K+      F+PGF+  +    F  + G+  +DH VGNV ++   V+Y ++  GF 
Sbjct:   147 TLVERKNYKG--TFMPGFQKAEFDIPFE-ESGLIAVDHVVGNVEKMEEWVSYYENVMGFK 203

Query:   234 EFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQH 293
             +   F  +D+ T  S L S V+ N    +  P+NEP  G KRKSQIQ YLE   GAGVQH
Sbjct:   204 QMIHFDDDDISTEYSALMSKVMTNGSR-IKFPINEPADG-KRKSQIQEYLEFYNGAGVQH 261

Query:   294 LALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVL 353
             LAL++ DI +T+  +R      G EF+ +P  TYY  L  R G +  DE+I + +EL +L
Sbjct:   262 LALLTNDIVKTVEALR----ANGVEFLDTPD-TYYDELTARVGKI--DEEIDKLKELKIL 314

Query:   354 VDRDDQGTLLQIFTKPVGDR 373
             VDRDD+G LLQIFTKP+ DR
Sbjct:   315 VDRDDEGYLLQIFTKPIVDR 334

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=ISS

GO:0006559 "L-phenylalanine catabolic process" evidence=ISS

GO:0006572 "tyrosine catabolic process" evidence=ISS

UNIPROTKB|Q5EA20 HPD "4-hydroxyphenylpyruvate dioxygenase" [Bos taurus (taxid:9913)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 136/363 (37%), Positives = 186/363 (51%)

Query:    24 KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
             K +R R   FH V FW  +A   A  +   LG   +A   L TG+    S++++ G + F
Sbjct:    10 KPERGRFLHFHSVTFWVGNAKQAASYYCSKLGFEPLAYKGLETGSREVVSHVVKQGQIVF 69

Query:    84 VFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
             VF++  +P                  DH         HG   + IA EVED D     + 
Sbjct:    70 VFSSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCDYIVQKAR 111

Query:   144 AHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE--P-TD- 195
               GAK    P V  D L  +  A +Q YGD     V   +K N+   FLPGFE  P  D 
Sbjct:   112 ERGAKIVREPWVEQDKLGKVKFAVLQTYGDTTHTLV---EKMNYTGRFLPGFEAPPFMDP 168

Query:   196 EISSFPLDYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSESGLNS 252
             ++S  P    +  +DH VGN P  E+  A   Y+K+   FH F       V T  S L S
Sbjct:   169 QLSKLP-SCSLEIIDHIVGNQPDQEMVSASEWYLKNLQ-FHRFWSVDDTQVHTEYSSLRS 226

Query:   253 VVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRS 312
             VV+AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL ++DI   +R +R+R 
Sbjct:   227 VVVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTKDIITAIRHLRER- 284

Query:   313 GVGGFEFMPSPPPTYYKNLKNRA--GDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV 370
                G EF+ + P TYYK L+ +     +   E I   EEL +LVD D++G LLQIFTKP+
Sbjct:   285 ---GVEFL-AVPSTYYKQLREKLKMAKIRVKENIDILEELKILVDYDEKGYLLQIFTKPM 340

Query:   371 GDR 373
              DR
Sbjct:   341 QDR 343

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=ISS

GO:0006572 "tyrosine catabolic process" evidence=ISS

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|P32754 HPD "4-hydroxyphenylpyruvate dioxygenase" [Homo sapiens (taxid:9606)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 132/362 (36%), Positives = 182/362 (50%)

Query:    24 KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
             K +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + F
Sbjct:    10 KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVF 69

Query:    84 VFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
             V ++  +P                  DH         HG   + IA EVED D     + 
Sbjct:    70 VLSSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCDYIVQKAR 111

Query:   144 AHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHL-DFLPGFE-PT--DE 196
               GAK    P V  D    +  A +Q YGD     V   +K N++  FLPG+E P   D 
Sbjct:   112 ERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKMNYIGQFLPGYEAPAFMDP 168

Query:   197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSESGLNSV 253
             +        +  +DH VGN P  E+  A   Y+K+   FH F       V T  S L S+
Sbjct:   169 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQ-FHRFWSVDDTQVHTEYSSLRSI 227

Query:   254 VLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSG 313
             V+AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+R  
Sbjct:   228 VVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER-- 284

Query:   314 VGGFEFMPSPPPTYYKNLKNR--AGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVG 371
               G EF+ S P TYYK L+ +     +   E I   EEL +LVD D++G LLQIFTKPV 
Sbjct:   285 --GLEFL-SVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQ 341

Query:   372 DR 373
             DR
Sbjct:   342 DR 343

GO:0046872 "metal ion binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA;TAS

GO:0006572 "tyrosine catabolic process" evidence=ISS

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=EXP;ISS

GO:0005829 "cytosol" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|F6X9H7 HPD "4-hydroxyphenylpyruvate dioxygenase" [Canis lupus familiaris (taxid:9615)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 131/362 (36%), Positives = 184/362 (50%)

Query:    24 KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
             K +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + F
Sbjct:    10 KPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 69

Query:    84 VFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
             VF++  +P                  DH         HG   + IA EVED D     + 
Sbjct:    70 VFSSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCDYIVQKAR 111

Query:   144 AHGAKPSSPPVILDNL---AVIAEVQLYGDVVLRYVSYKDKANHLD-FLPGFE-PT--DE 196
               GAK    P I ++      +A +Q YGD     V   +K N+   FLPGFE P   D 
Sbjct:   112 EQGAKIMREPWIEEDKFGKVKLAVLQTYGDTTHTLV---EKINYTGRFLPGFEAPACVDP 168

Query:   197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSESGLNSV 253
             + S      +  +DH VGN P  E+  A   Y+K+   FH F       V T  S L S+
Sbjct:   169 LLSKLPSCSLEIIDHIVGNQPDQEMVSASEWYLKNLQ-FHRFWSVDDTQVHTEYSSLRSI 227

Query:   254 VLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSG 313
             V+AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL ++DI   +R +R R  
Sbjct:   228 VVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTQDIITAIRHLRDR-- 284

Query:   314 VGGFEFMPSPPPTYYKNLKNR--AGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVG 371
               G EF+ + P TYYK L+ +  +  +   E I   EEL +LVD D++G LLQIFTKP+ 
Sbjct:   285 --GMEFL-AVPSTYYKQLREKLKSAKIQVKESIDVLEELKILVDYDEKGYLLQIFTKPMQ 341

Query:   372 DR 373
             DR
Sbjct:   342 DR 343

GO:0046872 "metal ion binding" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=IEA

RGD|61974 Hpd "4-hydroxyphenylpyruvate dioxygenase" [Rattus norvegicus (taxid:10116)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 130/368 (35%), Positives = 185/368 (50%)

Query:    18 FVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR 77
             +  + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++
Sbjct:     4 YSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK 63

Query:    78 SGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADV 137
              G + FV  +  +P                  DH         HG   + IA EVED + 
Sbjct:    64 QGKIVFVLCSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCEH 105

Query:   138 AFNTSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE- 192
                 +   GAK    P V  D    +  A +Q YGD     V   +K N+   FLPGFE 
Sbjct:   106 IVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEA 162

Query:   193 PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSE 247
             PT + +  P      +  +DH VGN P  E+  A   Y+K+   FH F       V T  
Sbjct:   163 PTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQ-FHRFWSVDDTQVHTEY 221

Query:   248 SGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLRE 307
             S L S+V+AN +E + +P+NEP  G K KSQIQ Y+++N GAGVQH+AL +EDI  T+R 
Sbjct:   222 SSLRSIVVANYEESIKMPINEPAPGRK-KSQIQEYVDYNGGAGVQHIALRTEDIITTIRH 280

Query:   308 MRKRSGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI 365
             +R+R    G EF+ + P +YY+ L+   +   +   E +   EEL +LVD D++G LLQI
Sbjct:   281 LRER----GMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQI 335

Query:   366 FTKPVGDR 373
             FTKP+ DR
Sbjct:   336 FTKPMQDR 343

GO:0000139 "Golgi membrane" evidence=IDA

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=IEA;ISO;IDA;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0006572 "tyrosine catabolic process" evidence=IDA;TAS

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|P32755 Hpd "4-hydroxyphenylpyruvate dioxygenase" [Rattus norvegicus (taxid:10116)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 130/368 (35%), Positives = 185/368 (50%)

Query:    18 FVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR 77
             +  + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++
Sbjct:     4 YSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK 63

Query:    78 SGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADV 137
              G + FV  +  +P                  DH         HG   + IA EVED + 
Sbjct:    64 QGKIVFVLCSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCEH 105

Query:   138 AFNTSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE- 192
                 +   GAK    P V  D    +  A +Q YGD     V   +K N+   FLPGFE 
Sbjct:   106 IVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEA 162

Query:   193 PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSE 247
             PT + +  P      +  +DH VGN P  E+  A   Y+K+   FH F       V T  
Sbjct:   163 PTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQ-FHRFWSVDDTQVHTEY 221

Query:   248 SGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLRE 307
             S L S+V+AN +E + +P+NEP  G K KSQIQ Y+++N GAGVQH+AL +EDI  T+R 
Sbjct:   222 SSLRSIVVANYEESIKMPINEPAPGRK-KSQIQEYVDYNGGAGVQHIALRTEDIITTIRH 280

Query:   308 MRKRSGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI 365
             +R+R    G EF+ + P +YY+ L+   +   +   E +   EEL +LVD D++G LLQI
Sbjct:   281 LRER----GMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQI 335

Query:   366 FTKPVGDR 373
             FTKP+ DR
Sbjct:   336 FTKPMQDR 343

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:96213 Hpd "4-hydroxyphenylpyruvic acid dioxygenase" [Mus musculus (taxid:10090)]

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 130/365 (35%), Positives = 183/365 (50%)

Query:    21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD 80
             + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G 
Sbjct:     7 KGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYRGLETGSREVVSHVIKQGK 66

Query:    81 LRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFN 140
             + FV  +  +P                  DH         HG   + IA EVED D    
Sbjct:    67 IVFVLCSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCDHIVQ 108

Query:   141 TSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE-PTD 195
              +   GAK    P V  D    +  A +Q YGD     V   +K N+   FLPGFE PT 
Sbjct:   109 KARERGAKIVREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEAPTY 165

Query:   196 EISSFPL--DYGIRRLDHAVGNVP--ELAPAVA-YVKSFTGFHEFAEFTAEDVGTSESGL 250
             + +  P      +  +DH VGN P  E+  A   Y+K+   FH F       V T  S L
Sbjct:   166 KDTLLPKLPRCNLEIIDHIVGNQPDQEMQSASEWYLKNLQ-FHRFWSVDDTQVHTEYSSL 224

Query:   251 NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRK 310
              S+V+ N +E + +P+NEP  G K KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+
Sbjct:   225 RSIVVTNYEESIKMPINEPAPGRK-KSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRE 283

Query:   311 RSGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTK 368
             R    G EF+ +P  +YYK L+   ++  +   E +   EEL +LVD D++G LLQIFTK
Sbjct:   284 R----GTEFLAAPS-SYYKLLRENLKSAKIQVKESMDVLEELHILVDYDEKGYLLQIFTK 338

Query:   369 PVGDR 373
             P+ DR
Sbjct:   339 PMQDR 343

GO:0000139 "Golgi membrane" evidence=ISO

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0006572 "tyrosine catabolic process" evidence=ISO

GO:0008127 "quercetin 2,3-dioxygenase activity" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016701 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|Q96X22 HPD4 "4-hydroxyphenylpyruvate dioxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 117/360 (32%), Positives = 179/360 (49%)

Query:    33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPX 92
             + HV +W  +A   A  ++   GM I+A   L TG+   ASYL+   D+RFVFT+P    
Sbjct:    38 YDHVTWWVGNAKQAASYYNTLFGMKIIAYRGLETGSRYFASYLVGKEDVRFVFTSPIR-- 95

Query:    93 XXXXXXXXXXXXXLPTFDHAACRSFAA---SHGLAARSIAVEVEDADVAFNTSVAHGAKP 149
                          +   D A  +   A    HG A + +  EV++    +  +V  GA  
Sbjct:    96 ---SHVHLPEDEPISDEDRALLKEMHAHLEKHGDAVKDVCFEVDNVQGVYERAVQQGAVS 152

Query:   150 SSPPVILDNL----AVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYG 205
              +PP  L +       +A +Q YGD     +S +D      FLPGF    +++  P  Y 
Sbjct:   153 IAPPKTLSDKEHGSVTMAVIQTYGDTTHTLLS-RDNFRGT-FLPGFR---DVNRQPAAYS 207

Query:   206 ------IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLAN 257
                   ++R+DH VGN    ++  A  + +    FH F       + T  S LNS+V+A+
Sbjct:   208 ALAPVPLQRIDHCVGNQDWDDMRAACDFYERCLSFHRFWSVDDNQISTDFSALNSIVMAS 267

Query:   258 NDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGF 317
              + +V +P+NEP  G KR SQI+ Y+  N GAGVQH+AL++ DI  T+  MR R    G 
Sbjct:   268 PNNVVKMPINEPAKGKKR-SQIEEYVTFNSGAGVQHIALLTSDIITTVEAMRSR----GV 322

Query:   318 EFMPSPPPTYYKNLKNRAGDVLTDEQIKQ-CEEL---GVLVDRDDQGTLLQIFTKPVGDR 373
             EF+   P TYY  ++ R      D ++++  + L    +L+D D+ G LLQ+FT+P+ DR
Sbjct:   323 EFI-EVPHTYYDTMRRRLKTEKRDWELQEDFDRLVRNNILIDYDEGGYLLQLFTRPLMDR 381

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-040808-62 hpdb "4-hydroxyphenylpyruvate dioxygenase b" [Danio rerio (taxid:7955)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 127/367 (34%), Positives = 177/367 (48%)

Query:    17 NFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLL 76
             +++ +  K +  +   F H+ FW  +A   A  +   LG   +A   L TG+    S+ +
Sbjct:     3 SYIDKGEKHEEGKFICFDHITFWVGNAKQAASYYCNKLGFEPLAYRGLETGSREVVSHAV 62

Query:    77 RSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDAD 136
             + G + +VFT+  +P                  DH         HG   + +A  VE+ D
Sbjct:    63 KQGKIIYVFTSALNPGNKEMG------------DHLV------KHGDGVKDVAFTVENCD 104

Query:   137 VAFNTSVAHGA---KPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEP 193
                  +   GA   K S           +A VQ YGD    +V  +   N L FLPGF  
Sbjct:   105 FLVEKARERGAIIIKESHAVEDKFGRVKMAVVQTYGDTTHTFVE-RTGYNGL-FLPGFHA 162

Query:   194 TDEISSF--PLDYG-IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSES 248
                   F   L  G +  +DH VGN P  E+ P V + +    FH F     + + T  S
Sbjct:   163 PLFCDPFLAKLPSGKLDFIDHVVGNQPDSEMVPIVEWYQRNLLFHRFWSVDDKQLQTEYS 222

Query:   249 GLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREM 308
              L S+V+AN +E V +P+NEP  G KRKSQIQ Y+E+  GAGVQH+A+ + DI   +R +
Sbjct:   223 ALRSIVVANYEETVKMPINEPAMG-KRKSQIQEYVEYYGGAGVQHIAMNTSDIISAIRNL 281

Query:   309 RKRSGVGGFEFMPSPPPTYYKNLKNRA--GDVLTDEQIKQCEELGVLVDRDDQGTLLQIF 366
             ++R    G EFM S P TYY+ LK +     V   E +   EEL +LVD DD G LLQIF
Sbjct:   282 KER----GMEFM-SVPDTYYQQLKEKLKLSKVRIIEDLNILEELKILVDYDDNGYLLQIF 336

Query:   367 TKPVGDR 373
             TKPV DR
Sbjct:   337 TKPVQDR 343

GO:0016701 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=IEA

UNIPROTKB|F1NVJ0 HPD "4-hydroxyphenylpyruvate dioxygenase" [Gallus gallus (taxid:9031)]

 Score = 362 (132.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
 Identities = 98/264 (37%), Positives = 137/264 (51%)

Query:   121 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVS 177
             HG   + +A EVED D     +   GA     P V  D    +  A +Q YGD     V 
Sbjct:    89 HGDGVKDVAFEVEDCDFIVQKAKERGAVVVKEPWVEEDKFGKVKFAVIQTYGDTTHTLV- 147

Query:   178 YKDKANHLD-FLPGFE-PTDEISSFPL--DYGIRRLDHAVGNVPEL--APAVAYVKSFTG 231
               +K N+   FLPG+  P       P      +  +DH VGN P+L   P   + +    
Sbjct:   148 --EKLNYKGLFLPGYHAPLFRDPLLPRLPSAKLSFVDHVVGNQPDLQMVPVADWYQKNLL 205

Query:   232 FHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV 291
             FH F     + + T  S L S+V+ N +E + +P+NEP  G KRKSQIQ Y+++  GAGV
Sbjct:   206 FHRFWSVDDKQLHTEFSALRSIVVTNYEETIKMPINEPANG-KRKSQIQEYIDYYGGAGV 264

Query:   292 QHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNR--AGDVLTDEQIKQCEE 349
             QH+AL + DI   +  +++R    G +FM   P +YY+ L+ R     +   E I + EE
Sbjct:   265 QHIALNTSDIISAITNLKQR----GMQFM-DVPSSYYQLLRERLKTAKIKVKESIDKLEE 319

Query:   350 LGVLVDRDDQGTLLQIFTKPVGDR 373
             L +LVD D++G LLQIFTKPV DR
Sbjct:   320 LKILVDFDEKGYLLQIFTKPVQDR 343

GO:0003868 "4-hydroxyphenylpyruvate dioxygenase activity" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5EA20	HPPD_BOVIN	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3591	0.8277	0.8193	yes	no
P49429	HPPD_MOUSE	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3461	0.8380	0.8295	yes	no
P93836	HPPD_ARATH	1, ., 1, 3, ., 1, 1, ., 2, 7	0.7582	0.9331	0.8157	yes	no
O23920	HPPD_DAUCA	1, ., 1, 3, ., 1, 1, ., 2, 7	0.7609	0.9177	0.8076	N/A	no
Q5BKL0	HPPD_XENTR	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3166	0.8843	0.8730	yes	no
O48604	HPPD_HORVU	1, ., 1, 3, ., 1, 1, ., 2, 7	0.6143	0.9100	0.8156	N/A	no
P32755	HPPD_RAT	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3378	0.8457	0.8371	yes	no
P32754	HPPD_HUMAN	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3518	0.8303	0.8218	yes	no
Q4WHU1	HPPD1_ASPFU	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3216	0.8688	0.8387	yes	no
Q76NV5	HPPD_DICDI	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3116	0.8071	0.8555	yes	no
Q9S2F4	HPPD_STRCO	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3577	0.8354	0.8530	yes	no
Q53586	HPPD_STRAW	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3521	0.8354	0.8530	yes	no
Q02110	HPPD_PIG	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3179	0.8123	0.8040	yes	no
Q22633	HPPD_CAEEL	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3089	0.8097	0.8015	yes	no
Q6CDR5	HPPD_YARLI	1, ., 1, 3, ., 1, 1, ., 2, 7	0.3070	0.8431	0.8324	yes	no
Q9ARF9	HPPD_SOLSC	1, ., 1, 3, ., 1, 1, ., 2, 7	0.7369	0.9177	0.8188	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.27	0.991
3rd Layer	1.13.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	389
PLN02875	398	PLN02875, PLN02875, 4-hydroxyphenylpyruvate dioxyg	0.0
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	1e-115
cd07250	191	cd07250, HPPD_C_like, C-terminal domain of 4-hydro	2e-67
COG3185	363	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygen	1e-44
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	8e-39
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-06
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	1e-04
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	4e-04

>gnl|CDD|215472 PLN02875, PLN02875, 4-hydroxyphenylpyruvate dioxygenase

 Score =  657 bits (1697), Expect = 0.0
 Identities = 255/346 (73%), Positives = 283/346 (81%), Gaps = 6/346 (1%)

Query: 33  FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPS 92
           FHHVEFWC DATNTARRFSWGLGMP+VAKSDL+TGNT +ASYLLRSGDL F+FTAPYSP 
Sbjct: 1   FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPK 60

Query: 93  ISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP 152
           I    D   S+A  P+F   A R F A HGLA R++ V VEDA+ AF TSVAHGA+P   
Sbjct: 61  IGAGDDDPASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLE 120

Query: 153 PVILDN-----LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIR 207
           P  L +      AVIAEV+LYGDVVLRYVSYK       FLPG+EP +  SSFPLDYG+R
Sbjct: 121 PTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGA-KFLPGYEPVESSSSFPLDYGLR 179

Query: 208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMN 267
           RLDHAVGNVP L PAV Y+  FTGFHEFAEFTAEDVGT +SGLNS+VLA+N+EMVLLP+N
Sbjct: 180 RLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLN 239

Query: 268 EPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTY 327
           EP FGTKRKSQIQTYLEHNEG G+QHLAL S+DIF TLREMR RS +GGFEFMP PPPTY
Sbjct: 240 EPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTY 299

Query: 328 YKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           YKNLK R GDVLT+EQIK+CEELG+LVD+DDQG LLQIFTKPVGDR
Sbjct: 300 YKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLLQIFTKPVGDR 345

Length = 398

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score =  338 bits (869), Expect = e-115
 Identities = 136/348 (39%), Positives = 176/348 (50%), Gaps = 40/348 (11%)

Query: 32  RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSP 91
            F  VEF+  DA   A  +    G   VAK    TG+   AS++LR G + FV TAPYS 
Sbjct: 2   GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKE---TGHREKASHVLRQGQINFVLTAPYSS 58

Query: 92  SISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSS 151
             S AAD                  FAA HG   + +A  V+DA  AF  +V  GA+P  
Sbjct: 59  D-SPAAD------------------FAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQ 99

Query: 152 PPVILDNLAV-IAEVQLYGDVVLRYVSYKDKANHLDFLPGF---EPTDEISSFPLDYGIR 207
            PV LD  AV +A ++  GDVV   V          F PGF        +   P   G+ 
Sbjct: 100 APVELDEGAVTLATIKGIGDVVHTLVDRGGYKG--SFYPGFFESLLDAALHEPPPGVGLI 157

Query: 208 RLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLP 265
            +DH VGNV   ++ P   + +   GF E   F   D+ T  S LNS+V+A+ D  V +P
Sbjct: 158 AIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSF---DIKTEYSALNSIVMASPDGKVKIP 214

Query: 266 MNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPP 325
           +NEP    K KSQI+ +LE   GAGVQH+AL ++DI RT+R +R R    G EF+   P 
Sbjct: 215 LNEPA-SGKDKSQIEEFLEFYNGAGVQHIALNTDDIVRTVRALRAR----GVEFLD-TPD 268

Query: 326 TYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           TYY  L  R G     E +    EL +L+D D+ G LLQIFTKP+ DR
Sbjct: 269 TYYDLLGERLGGH-VKEDLDTLRELNILIDGDEDGYLLQIFTKPLQDR 315

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176673 cd07250, HPPD_C_like, C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

 Score =  211 bits (539), Expect = 2e-67
 Identities = 86/170 (50%), Positives = 108/170 (63%), Gaps = 11/170 (6%)

Query: 206 IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVL 263
           + R+DH VGNVP  E+   V + +   GFH F  F  ED     SGL S VLA+ D  + 
Sbjct: 1   LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDP---YSGLRSRVLASPDGKIR 57

Query: 264 LPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP 323
           +P+NEP  G KRKSQIQ +LE+  GAGVQH+AL ++DIF T+  +R R    G EF+P  
Sbjct: 58  IPLNEPASG-KRKSQIQEFLEYYGGAGVQHIALATDDIFATVAALRAR----GVEFLP-I 111

Query: 324 PPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           P  YY +L+ R   +L DE +    ELG+LVDRDD G LLQIFTKPV DR
Sbjct: 112 PDNYYDDLEARLDGILVDEDLDTLRELGILVDRDDGGYLLQIFTKPVFDR 161

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_C_like domain represents the C-terminal domain. Length = 191

>gnl|CDD|225726 COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

 Score =  157 bits (399), Expect = 1e-44
 Identities = 97/348 (27%), Positives = 144/348 (41%), Gaps = 47/348 (13%)

Query: 29  RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAP 88
             + F  VEF   D           LG   VAK   S   T     L R GD+  V    
Sbjct: 19  GTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKH-RSKAVT-----LYRQGDINLV---- 68

Query: 89  YSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAK 148
               ++   D+            AA   F   HG +A ++A  V+DA+ A   ++A GA+
Sbjct: 69  ----VNAEPDS-----------FAA--EFLDKHGPSACAMAFRVDDAEQALARALALGAR 111

Query: 149 PSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRR 208
                +    + + A ++  G  +L +V          +   FEP           G+  
Sbjct: 112 TIDTEIGAGEVDIPA-IRGIGGSLLYFVDRYGG--RSIYDVEFEPNGA-QGASGGVGLTA 167

Query: 209 LDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM 266
           +DH   NV   ++   V + +S  GF E   F   D+    +GL S  + +    V LP+
Sbjct: 168 IDHLTHNVKAGQMDTWVLFYESLFGFREIQYF---DIPGPITGLRSRAMVSPCGKVRLPL 224

Query: 267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPT 326
           NE       KSQI  +L    G G+QH+A  ++DI+ T+  +R+R    G +F+P  P T
Sbjct: 225 NES---ADDKSQIGEFLREYRGEGIQHIAFGTDDIYATVAALRER----GVKFLP-IPET 276

Query: 327 YYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT-LLQIFTKPVGDR 373
           YY +L  R    L  E +    EL +L D D  G  LLQIFT+     
Sbjct: 277 YYDDLDARFP--LHGEFLDALRELEILYDGDGGGGELLQIFTRTFIGP 322

Length = 363

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score =  135 bits (342), Expect = 8e-39
 Identities = 55/161 (34%), Positives = 67/161 (41%), Gaps = 25/161 (15%)

Query: 33  FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPS 92
           F HVEF+  +A   A  FS  LG   VA           ASYLLR GD+ FV  +P +  
Sbjct: 1   FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE----DKASYLLRQGDINFVLNSPLNS- 55

Query: 93  ISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP 152
                              A    F   HG     +A  V+DA  A+  +VA GAKP   
Sbjct: 56  ------------------FAPVADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQE 97

Query: 153 PVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEP 193
           PV       IA ++ YGD +   V  K       FLPGFEP
Sbjct: 98  PVEEPGELKIAAIKGYGDSLHTLVDRKGYKGP--FLPGFEP 136

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 20/125 (16%)

Query: 208 RLDHAVGNVPELAPAVA-YVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM 266
           R+DH    V +L  ++  Y     GF        E+V   E  L S        ++ L +
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVL-GFKL-----VEEVDDGEGPLRSAFFTAGGRVLELLL 54

Query: 267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPT 326
           NE                   G  +  +A   +D+      ++      G E +  P   
Sbjct: 55  NETP---------PPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAA----GVEIVREPGRH 101

Query: 327 YYKNL 331
            +   
Sbjct: 102 GWGGR 106

Length = 120

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 20/113 (17%)

Query: 216 VPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEM---VLLPMNEPVFG 272
           VP+L  A+ + +   G   +          SE G+  +       +   ++ P+++    
Sbjct: 8   VPDLEAALKFYRDVLGVGPWEREEVP----SEQGV-RLAFLGLGNVQIELIEPLDDD--- 59

Query: 273 TKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPP 325
               S I  +LE   G G+ H+A   +DI   L  ++ +    G   +   P 
Sbjct: 60  ----SPIAKFLEKR-GEGLHHIAFEVDDIDAALARLKAQ----GVRLLQEGPR 103

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 15/106 (14%)

Query: 208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLA-NNDEMVLL-P 265
           R+DH    VP+L  A  + +   G        +E     E G+  V +A  N ++ LL P
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQV-----SEIEELPEQGVKVVFIALGNTKVELLEP 55

Query: 266 MNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKR 311
           + E        S I  +LE N G G+ H+A+  +DI   L  ++++
Sbjct: 56  LGE-------DSPIAKFLEKNGG-GIHHIAIEVDDIEAALETLKEK 93

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	389
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	100.0
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	100.0
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	100.0
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	100.0
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	99.9
PLN02300	286	lactoylglutathione lyase	99.89
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.88
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.87
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.86
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.85
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.62
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.57
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.55
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.54
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.54
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.53
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.5
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.49
PLN02367	233	lactoylglutathione lyase	99.49
PLN03042	185	Lactoylglutathione lyase; Provisional	99.48
PRK11478	129	putative lyase; Provisional	99.48
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.44
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.44
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.39
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.38
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.37
PLN02367	233	lactoylglutathione lyase	99.35
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.33
PLN03042	185	Lactoylglutathione lyase; Provisional	99.32
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.31
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.31
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.29
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.27
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.27
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.27
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.26
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.26
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.25
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.24
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.24
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.23
PRK11478	129	putative lyase; Provisional	99.23
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.23
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.22
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.22
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.22
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.22
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.2
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.18
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.17
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.17
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.17
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.17
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.16
PRK10291	129	glyoxalase I; Provisional	99.15
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.15
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.15
PRK06724	128	hypothetical protein; Provisional	99.15
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.13
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.12
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.12
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.12
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.11
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.11
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.11
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.1
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.1
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.09
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.09
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.09
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.08
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.08
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.07
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.07
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.06
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.06
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.06
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.05
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.05
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.04
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.04
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.03
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.03
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.02
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.02
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.02
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.01
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.01
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.01
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.01
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.01
PLN02300	286	lactoylglutathione lyase	98.99
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.99
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	98.99
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	98.98
PRK04101	139	fosfomycin resistance protein FosB; Provisional	98.98
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	98.97
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	98.96
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	98.96
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	98.96
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	98.96
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	98.96
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.96
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	98.94
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	98.94
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	98.93
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.93
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	98.93
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	98.92
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	98.92
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.91
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	98.91
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.91
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	98.9
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	98.89
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	98.88
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	98.88
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	98.88
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	98.87
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	98.87
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.86
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.83
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	98.81
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	98.8
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	98.8
PRK10291	129	glyoxalase I; Provisional	98.8
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	98.79
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	98.78
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	98.77
PRK06724	128	hypothetical protein; Provisional	98.76
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	98.76
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	98.76
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	98.75
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.72
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	98.72
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	98.72
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	98.69
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	98.67
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.67
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	98.66
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	98.64
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.64
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	98.62
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	98.6
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	98.58
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	98.55
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	98.54
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	98.54
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.51
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	98.46
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	98.42
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	98.41
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	98.39
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.32
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.31
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	98.26
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	98.24
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.24
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.23
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	98.22
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.13
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	98.09
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.07
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.07
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	98.04
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	97.8
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	97.78
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	97.58
COG3607	133	Predicted lactoylglutathione lyase [General functi	97.51
COG3324	127	Predicted enzyme related to lactoylglutathione lya	97.28
PRK10148	147	hypothetical protein; Provisional	97.28
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.21
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	96.97
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	96.9
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	96.76
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	96.67
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	96.64
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	95.57
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	94.26
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	91.37
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	88.32
PF07063	302	DUF1338: Domain of unknown function (DUF1338); Int	85.49
COG3607	133	Predicted lactoylglutathione lyase [General functi	83.32
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	82.94
PRK10148	147	hypothetical protein; Provisional	81.98

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=100.00  E-value=1.8e-79  Score=606.32  Aligned_cols=351  Identities=73%  Similarity=1.165  Sum_probs=304.9

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      ||||+|||+|+++++.||+..|||+.++++++++|++...+++++||+++|+|++|..+..+...+...++...|.++.+
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            69999999999999999999999999999999999988899999999999999999755211100001122234444446


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-----ceEEEEEEecCCeEEEEeecCCCCCCCC-
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-----LAVIAEVQLYGDVVLRYVSYKDKANHLD-  186 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-----~~~~~~v~~~gg~~~~fve~~~~~~~g~-  186 (389)
                      ++++|++.||+|||+|||+|+|+++++++|+++|++++.+|+...+     .+.++.|+++||++|+||++  .++.+. 
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr--~~~~~~~  158 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY--KGFDGAK  158 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc--CCCCCCc
Confidence            7899999999999999999999999999999999999999887533     37899999999999999996  455566 


Q ss_pred             CCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEe
Q 016432          187 FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM  266 (389)
Q Consensus       187 ~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l  266 (389)
                      |+|+|++.+.......+.++.+||||+++|++|++|+.||+++|||+..++++.+++.+..+|++|+++.++++.++|+|
T Consensus       159 f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipL  238 (398)
T PLN02875        159 FLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPL  238 (398)
T ss_pred             cCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEe
Confidence            99999766432211234569999999999999999999999999999999888777777889999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHH
Q 016432          267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQ  346 (389)
Q Consensus       267 ~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~  346 (389)
                      |||..+++++|||++||++++|+|||||||.|+||.+++++|++++.+.|++||++||++||++|.+|++.++.+++|++
T Consensus       239 nEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~  318 (398)
T PLN02875        239 NEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKE  318 (398)
T ss_pred             ccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHH
Confidence            99974324689999999999999999999999999999999999644459999998768999999999975568999999


Q ss_pred             HHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecC
Q 016432          347 CEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFS  385 (389)
Q Consensus       347 l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~  385 (389)
                      ||++|||||+|++||||||||||+++|||||||||||+|
T Consensus       319 L~~~~ILvD~d~~G~LLQIFTkp~~~rpt~FfEiIQR~g  357 (398)
T PLN02875        319 CEELGILVDKDDQGVLLQIFTKPVGDRPTLFLEIIQRIG  357 (398)
T ss_pred             HHHcCEEEecCCCceEEEEeccccCCCCceEEEEEEecC
Confidence            999999999999999999999999999999999999997

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=100.00  E-value=9.2e-83  Score=590.89  Aligned_cols=346  Identities=41%  Similarity=0.655  Sum_probs=320.5

Q ss_pred             cccccCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccc
Q 016432           17 NFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDA   96 (389)
Q Consensus        17 ~~~~~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~   96 (389)
                      .| ++|+||+...+.++|||+|||.|+.++++||+..|||++.+++++++|++..+++++++|++.++++++.+|+.   
T Consensus         3 ~~-~k~~k~~~g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~---   78 (381)
T KOG0638|consen    3 TY-DKGAKPEAGKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDN---   78 (381)
T ss_pred             cc-cCCCCccccceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCc---
Confidence            35 88999999999999999999999999999999999999999999999998888999999999999999988763   


Q ss_pred             cccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEE
Q 016432           97 ADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVL  173 (389)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~  173 (389)
                                     +....++.+||+||.+|||+|+|++++++.++++||+++++|....+   .++++.++++|++.|
T Consensus        79 ---------------~~~G~~l~~HgdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~th  143 (381)
T KOG0638|consen   79 ---------------SEYGDHLVKHGDGVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTH  143 (381)
T ss_pred             ---------------hhhhhhhhhcccchhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhh
Confidence                           23456889999999999999999999999999999999999976544   488999999999999


Q ss_pred             EEeecCCCCCCCCCCCCCccCCCCCCC--CccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccC
Q 016432          174 RYVSYKDKANHLDFLPGFEPTDEISSF--PLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG  249 (389)
Q Consensus       174 ~fve~~~~~~~g~~lp~f~~~~~~~~~--~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g  249 (389)
                      +++++  .+|.|.|||+|++++.....  ....++.+|||++.|++  +|+.+++||.++|||+.+|++++.++.+++++
T Consensus       144 tlvEr--~~y~g~FLPGF~~v~~~~~fp~l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~Sa  221 (381)
T KOG0638|consen  144 TLVER--KGYKGPFLPGFEPVSSDALFPKLPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSA  221 (381)
T ss_pred             hhhhh--ccccccCCCCcccCccccccCCCCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHH
Confidence            99996  68999999999998762211  12368999999999998  89999999999999999999998888899999


Q ss_pred             ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhH
Q 016432          250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYK  329 (389)
Q Consensus       250 ~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~  329 (389)
                      ++|+++.+.++.|+++||||.+|....|||++|+++|+|+|+||||+.|+||.+|++.|++|    |++||.+| .+||+
T Consensus       222 Lrs~vlan~~esi~mpinEp~~G~k~ksQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~r----G~eFLs~P-s~YYq  296 (381)
T KOG0638|consen  222 LRSIVLANYEESIKMPINEPAPGKKKKSQIQEYVEYHGGAGVQHIALNTEDIIEAIRGLRAR----GGEFLSPP-STYYQ  296 (381)
T ss_pred             HHHHHHhcCCccEEEeccCCCCCCccHHHHHHHHHhcCCCceeeeeecchHHHHHHHHHHhc----CCccccCC-HHHHH
Confidence            99999999999999999999999666699999999999999999999999999999999999    99999988 99999


Q ss_pred             hHhhhhC--CCCChhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          330 NLKNRAG--DVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       330 ~l~~r~~--~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      +|++|+.  ...++|+++.|+++|||+|+|++||||||||||++||||||+|||||.|+.|
T Consensus       297 nl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQIFTKplqdrpTlFlEiIQR~n~~G  357 (381)
T KOG0638|consen  297 NLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQIFTKPLQDRPTLFLEIIQRQNHEG  357 (381)
T ss_pred             hHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEeeeeccccCCCchHHHHHHHHhcccc
Confidence            9999998  6778999999999999999999999999999999999999999999999876

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=100.00  E-value=2.6e-67  Score=520.98  Aligned_cols=324  Identities=40%  Similarity=0.639  Sum_probs=278.3

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      ++++||+|+|+|++++++||++.|||+++++..   +.+...+.++++|++.|+|++|..+.                  
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~---~~~~~~~~~~~~G~~~l~L~~~~~~~------------------   59 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKET---GHREKASHVLRQGQINFVLTAPYSSD------------------   59 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEee---cCCceeEEEEEeCCEEEEEecCCCCC------------------
Confidence            468999999999999999999999999998732   11234566789999999999876543                  


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEeecCCCCCCCCCCC
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVSYKDKANHLDFLP  189 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve~~~~~~~g~~lp  189 (389)
                       ++..+++..||+|+++|||+|+|+++++++|+++|++++.+|+... ++..++.|+++||+.|+|||+  .++.+.++|
T Consensus        60 -s~~~~~~~~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~--~~~~~~~~~  136 (353)
T TIGR01263        60 -SPAADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDR--GGYKGSFYP  136 (353)
T ss_pred             -chHHHHHHhCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcC--CCCCCCCCC
Confidence             2678899999999999999999999999999999999999887531 467899999999999999995  445556677


Q ss_pred             CCccCC-CC--CCCCccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEE
Q 016432          190 GFEPTD-EI--SSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLL  264 (389)
Q Consensus       190 ~f~~~~-~~--~~~~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l  264 (389)
                      ++.... ..  .....+..+.+|||++++|+  |+++|+.||+++|||++.++.+.   .++.+|++|+++.++++.++|
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~---~~~~~~~~s~~~~~~~g~~~i  213 (353)
T TIGR01263       137 GFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDI---KTEYSALNSIVMASPDGKVKI  213 (353)
T ss_pred             CccccccccccccCCCCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEe---ccCCccEEEEEEECCCCcEEE
Confidence            654221 10  01123567999999999998  99999999999999999887653   334578889999988899999


Q ss_pred             EeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhH
Q 016432          265 PMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQI  344 (389)
Q Consensus       265 ~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~  344 (389)
                      +|++|... ...+++++|++.++|+|+|||||.|+||++++++|+++    |++|+.+| .+||++|.+|++. +.++++
T Consensus       214 ~L~ep~~~-~~~s~i~~fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~----Gv~~l~~P-~~yY~~l~~r~~~-~~~~~~  286 (353)
T TIGR01263       214 PLNEPASG-KDKSQIEEFLEFYNGAGVQHIALNTDDIVRTVRALRAR----GVEFLDTP-DTYYDLLGERLGG-HVKEDL  286 (353)
T ss_pred             EEeccCCC-CCCCHHHHHHHHcCCCCccEEEEEcCCHHHHHHHHHHc----CCccCcCC-HHHHHHHHHHhcc-cccchH
Confidence            99998532 45789999999988999999999999999999999999    99999988 9999999999974 568999


Q ss_pred             HHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          345 KQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       345 ~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      ++||++|||||+|++||||||||||+++|||||||||||+|+.|
T Consensus       287 ~~l~~~~iL~D~d~~g~llqift~~~~~~~~~FfEiiqR~~~~g  330 (353)
T TIGR01263       287 DTLRELNILIDGDEDGYLLQIFTKPLQDRGTLFFEIIQRKGAGG  330 (353)
T ss_pred             HHHHHCCEEEecCCCceEEEEeccCCCCCCCeEEEEEEEcCCCc
Confidence            99999999999999999999999999999999999999999876

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.6e-67  Score=498.89  Aligned_cols=314  Identities=30%  Similarity=0.466  Sum_probs=280.3

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +..+++||+|+|+|.+.++.-|...|||+..+.|      |++.+.+++||+++|+||++  +.                
T Consensus        19 ~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~H------rsk~v~l~rQGdinlvvn~~--~~----------------   74 (363)
T COG3185          19 GTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKH------RSKAVTLYRQGDINLVVNAE--PD----------------   74 (363)
T ss_pred             CCCceeEEEEecCCHHHHHHHHHHHhCccccccc------cccceeEEEeCCEEEEEcCC--Cc----------------
Confidence            5899999999999998777778889999999987      46789999999999999974  22                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCCCCCCCCCC
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFL  188 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~~~g~~l  188 (389)
                         +.+++|+..||+++|.|||+|+|+..+++++++.|++.+..|.. ++++.++.|+++||++++|+|+++  -...|.
T Consensus        75 ---s~a~~f~~~Hgps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g-~~e~~ipai~giggsllyfvd~~~--~~siyd  148 (363)
T COG3185          75 ---SFAAEFLDKHGPSACAMAFRVDDAEQALARALALGARTIDTEIG-AGEVDIPAIRGIGGSLLYFVDRYG--GRSIYD  148 (363)
T ss_pred             ---chhhHHHHhcCCchheeEEeeCCHHHHHHHHHHcCCccccCCCC-CccccccceeccCCcEEEEeccCC--CCcccc
Confidence               37889999999999999999999999999999999988777765 368899999999999999999641  124688


Q ss_pred             CCCccCCCCCCCCccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEe
Q 016432          189 PGFEPTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM  266 (389)
Q Consensus       189 p~f~~~~~~~~~~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l  266 (389)
                      .+|++.+ ......+.++.+|||++.||.  .|+.|+.||+++|||+...+++.   .++.+|++|++|.+++|.|+|+|
T Consensus       149 ~~f~~~~-~~~~~~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi---~~p~tgl~Sram~Sp~G~vrlpl  224 (363)
T COG3185         149 VEFEPNG-AQGASGGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDI---PGPITGLRSRAMVSPCGKVRLPL  224 (363)
T ss_pred             ccccccc-ccccccccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEec---cCCcccEEEeeEecCCCcEEeec
Confidence            8887762 212234567899999999995  99999999999999999998874   45678999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHH
Q 016432          267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQ  346 (389)
Q Consensus       267 ~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~  346 (389)
                      |++.   +++|||++||..+.|+|||||||.|+||.+|+++|+++    |++||++| .+||+++.+|++  +++|+++.
T Consensus       225 N~s~---~~~sqi~efl~~y~G~GIQHIA~~T~dI~~tv~~lr~r----G~~fl~ip-~tYYd~~~~R~~--~~~e~ld~  294 (363)
T COG3185         225 NESA---DDKSQIGEFLREYRGEGIQHIAFGTDDIYATVAALRER----GVKFLPIP-ETYYDDLDARFP--LHGEFLDA  294 (363)
T ss_pred             ccCC---CchhHHHHHHHHhCCCcceEEEecccHHHHHHHHHHHc----CCccCCCc-hhHHHHHhhcCC--CChHHHHH
Confidence            9998   78899999999999999999999999999999999999    99999998 999999999988  89999999


Q ss_pred             HHHcCceeecCCCc-eEEEEeccccCCCCceEEEEEEe-cCCCC
Q 016432          347 CEELGVLVDRDDQG-TLLQIFTKPVGDRYVHLLMLVTT-FSFSS  388 (389)
Q Consensus       347 l~~~~IL~D~D~~g-~llqift~~~~~~~~~FfE~iqR-~~~~~  388 (389)
                      ||+++||||+|++| .||||||+|+.+  ||||||||| +|+.|
T Consensus       295 Lr~~~IL~D~~~~~~~lLQift~~~~g--~~FFEiIeRR~g~~G  336 (363)
T COG3185         295 LRELEILYDGDGGGGELLQIFTRTFIG--PFFFEIIERRKGYQG  336 (363)
T ss_pred             HHhcCeEeecCCCCcEEEEEecccccC--ceeEEEEEecccccc
Confidence            99999999999988 999999999977  499999999 66654

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=100.00  E-value=1e-45  Score=336.29  Aligned_cols=174  Identities=49%  Similarity=0.827  Sum_probs=160.2

Q ss_pred             ceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH
Q 016432          206 IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       206 ~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      +++||||+++|+  |+++|+.||+++|||+..+.++.++   ...|+++.++.++++.++|+|++|..+ ...+++++|+
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~---~~~~~~s~~l~~~~g~i~l~L~~~~~~-~~~s~~~~fl   76 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIED---PYSGLRSRVLASPDGKIRIPLNEPASG-KRKSQIQEFL   76 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCc---CcccEEEEEEECCCCcEEEEEecCCCC-CCccHHHHHH
Confidence            468999999999  9999999999999999988776433   246789999999999999999998742 2679999999


Q ss_pred             hhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          284 EHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      +.++|+|+|||||.|+||++++++|+++    |++++.+| .+||++|.+|++..+.+++++.|+++|||||+|++|+||
T Consensus        77 ~~~~G~Gv~HIAf~vdDI~~~~~~L~~~----Gv~~l~~P-~~yy~~l~~r~~~~~~~~~~~~l~~~~il~d~~~~~~ll  151 (191)
T cd07250          77 EYYGGAGVQHIALATDDIFATVAALRAR----GVEFLPIP-DNYYDDLEARLDGILVDEDLDTLRELGILVDRDDGGYLL  151 (191)
T ss_pred             HHhCCCceeEEEEECCCHHHHHHHHHHc----CCeeccCc-hhhHHHHHHhccccccchhHHHHHHCCEEEECCCCCEEE
Confidence            9988999999999999999999999999    99999998 999999999997556899999999999999999999999


Q ss_pred             EEeccccCCCCceEEEEEEecCCCC
Q 016432          364 QIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       364 qift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      ||||||+++|||||||||||+|+.|
T Consensus       152 q~ft~~~~~~~~~f~E~iqR~g~~g  176 (191)
T cd07250         152 QIFTKPVFDRPTFFFEIIQRRGYTG  176 (191)
T ss_pred             EEeccCCCCCCCeEEEEEEEcCCCc
Confidence            9999999999999999999999876

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=99.90  E-value=3.2e-24  Score=183.59  Aligned_cols=126  Identities=33%  Similarity=0.478  Sum_probs=100.8

Q ss_pred             cCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccC
Q 016432           21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        21 ~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      +||+    ++.+++||+|+|++.+++..++ ..|||+.++++      |++.+.+++||+++|+||+.  |+        
T Consensus         2 ~nP~----g~~G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~h------rsk~v~l~rQG~I~~vln~e--p~--------   60 (139)
T PF14696_consen    2 DNPL----GLDGFDFVEFAVPDAQALAQLF-TALGFQPVARH------RSKDVTLYRQGDINFVLNSE--PD--------   60 (139)
T ss_dssp             --TT-----EEEEEEEEEE-SSTTSCHHHH-CCCCEEEECCE------CCCSEEEEEETTEEEEEEEE--ST--------
T ss_pred             CCCC----CCCCeEEEEEecCCHHHHHHHH-HHhCcceEEec------CCcceEEEEeCCEEEEEeCC--Cc--------
Confidence            4666    7999999999999965555555 69999999988      45678999999999999983  33        


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecC
Q 016432          101 NSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                                 +.++.|++.||+|||.|||+|+|+++++++|+++|++.+.+|.. .++..+|+|+++||++|||||+.
T Consensus        61 -----------s~a~~~~~~HG~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~-~~e~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   61 -----------SFAAEFAAQHGPSVCAIAFRVDDAAAAYERAVALGAEPVQEPTG-PGELNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             -----------SCHHHHHHHHSSEEEEEEEEES-HHHHHHHHHHTT--EEEEEEE-TT-BEEEEEE-CCC-EEEEEE--
T ss_pred             -----------chHHHHHHhcCCEEEEEEEEeCCHHHHHHHHHHcCCcCcccCCC-CCcEeeeeEEccCCCEEEEEecC
Confidence                       26788999999999999999999999999999999999988876 46899999999999999999963

>PLN02300 lactoylglutathione lyase

Probab=99.89  E-value=7.2e-21  Score=183.61  Aligned_cols=227  Identities=18%  Similarity=0.252  Sum_probs=156.2

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--C--EEEEEEccCCCCCccccccCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--D--LRFVFTAPYSPSISDAADAGNS  102 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~--~~i~l~~p~~~~~~~~~~~~~~  102 (389)
                      .+.+.+++||.|.|+|++++++||++.|||++..+...+.+.  .....+..|  +  ..+.+.......          
T Consensus        19 ~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~lel~~~~~~~----------   86 (286)
T PLN02300         19 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK--YTNAFLGYGPEDSNFVVELTYNYGVD----------   86 (286)
T ss_pred             ccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCc--EEEEEEccCCCCCceEEEEeccCCCC----------
Confidence            357999999999999999999999999999987654332221  112223322  2  334443211100          


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEecCCeEEEEeecCCC
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLYGDVVLRYVSYKDK  181 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~gg~~~~fve~~~~  181 (389)
                                .     ..++.|..|+||.|+|+++++++++++|+++..+|...++ ......+++|+|..++|+++  .
T Consensus        87 ----------~-----~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~--~  149 (286)
T PLN02300         87 ----------K-----YDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQR--G  149 (286)
T ss_pred             ----------c-----cccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeC--C
Confidence                      0     0135688899999999999999999999998887755433 34567889999999999873  1


Q ss_pred             CCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEc--CC
Q 016432          182 ANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLAN--ND  259 (389)
Q Consensus       182 ~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~--~~  259 (389)
                      .                      ...+++|+.+.|+|++++..||+++|||+..+....++     .+.....+..  ..
T Consensus       150 ~----------------------~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~~~  202 (286)
T PLN02300        150 P----------------------TPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPE-----YKYTIAMMGYGPED  202 (286)
T ss_pred             C----------------------CCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccc-----cceEEEEEecCCCC
Confidence            0                      12356799999999999999999999999976543221     1222222321  11


Q ss_pred             cceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          260 EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       260 g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ....+++....    ...   ++   ..|+|.+|++|.|+||++++++++++    |++++.+|
T Consensus       203 ~~~~lel~~~~----~~~---~~---~~g~~~~~i~~~v~di~~~~~~~~~~----G~~v~~~p  252 (286)
T PLN02300        203 KTTVLELTYNY----GVT---EY---TKGNAYAQIAIGTDDVYKTAEAIKLV----GGKITREP  252 (286)
T ss_pred             CccEEEEeecC----CCC---cc---ccCCceeEEEEecCCHHHHHHHHHHc----CCeEecCC
Confidence            12234432221    100   11   24678999999999999999999999    99999876

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.88  E-value=1.8e-20  Score=181.89  Aligned_cols=251  Identities=16%  Similarity=0.190  Sum_probs=158.3

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc---CCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS---GDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~---g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      +++++||.|.|+|++++++||++.|||++..+.+    .   .+++...   +...+++...                  
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~----~---~~~~~~~~~~~~~~~~l~~~------------------   56 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG----Q---RVYLKAWDEWDHYSVILTEA------------------   56 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC----c---eEEEEeccccccceEeeccC------------------
Confidence            6889999999999999999999999999876532    1   1122111   1223333211                  


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEEEeecCCCC
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVSYKDKA  182 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~fve~~~~~  182 (389)
                                    ...|+.|+||.|+   |+++++++++++|+++...|... .+......+++|+|..++++..... 
T Consensus        57 --------------~~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~-  121 (303)
T TIGR03211        57 --------------DTAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEY-  121 (303)
T ss_pred             --------------CCCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEcccc-
Confidence                          1237899999998   89999999999999987655421 1223456788999999999873211 


Q ss_pred             CCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCc-eEEEEEcCCcc
Q 016432          183 NHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL-NSVVLANNDEM  261 (389)
Q Consensus       183 ~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~-~s~~~~~~~g~  261 (389)
                      . ........+..... ...++.+++|+||++.|+|++++.+||+++|||+.......++     .+. ...++....+.
T Consensus       122 ~-~~~~~~~~~~~~~~-~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~  194 (303)
T TIGR03211       122 V-GELVGGLNPDPWPD-PLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGD-----GKEQAAAWLSVSNKA  194 (303)
T ss_pred             c-cccccccCCccccc-ccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCC-----CcEEEEEEEEcCCCC
Confidence            1 10001111111000 1234568999999999999999999999999999865433211     111 12223222111


Q ss_pred             eEEEeccCCCCCCCCchHHHHHhhcCCCC-cceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCC
Q 016432          262 VLLPMNEPVFGTKRKSQIQTYLEHNEGAG-VQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGD  337 (389)
Q Consensus       262 v~l~l~e~~~~~~~~s~i~~fl~~~~g~G-vqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~  337 (389)
                      ..+.+                ... .+.| ++||||.|+|   +.+++++|+++    |++++..| ....      .+ 
T Consensus       195 ~~~~~----------------~~~-~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~----G~~~~~~p-~~~~------~~-  245 (303)
T TIGR03211       195 HDIAF----------------VGD-PEPGKLHHVSFFLDSWEDVLKAADVMSKN----DVSIDIGP-TRHG------IT-  245 (303)
T ss_pred             cccce----------------ecC-CCCCceEEEEEEcCCHHHHHHHHHHHHhC----CCceeeCC-cccC------CC-
Confidence            11111                111 2345 9999999986   56688899999    99988776 3211      00 


Q ss_pred             CCChhhHHHHHHcCceeecCCCceEEEEec
Q 016432          338 VLTDEQIKQCEELGVLVDRDDQGTLLQIFT  367 (389)
Q Consensus       338 ~~~~~~~~~l~~~~IL~D~D~~g~llqift  367 (389)
                                 ..-.+|=+|.+|.++.+++
T Consensus       246 -----------~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       246 -----------RGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             -----------CceEEEEECCCCCEEEEec
Confidence                       0013455677788888773

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.87  E-value=1.1e-19  Score=175.42  Aligned_cols=243  Identities=20%  Similarity=0.192  Sum_probs=158.7

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc---C-CEEEEEEccCCCCCccccccCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS---G-DLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~---g-~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      |.+++||.|.|+|++++++||+++|||++....+    .    ...++.   + ...+.+...                 
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~----~~~~~~~~~~~~~~l~l~~~-----------------   56 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E----YIYLRGIEEFQHHSLVLTKA-----------------   56 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C----eEEEeccCcCCceEEEeeeC-----------------
Confidence            7899999999999999999999999999876532    1    112221   1 223443321                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCCCC
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKA  182 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~  182 (389)
                                     ...++.|+||.|+   |+++++++++++|+++...+..  ...+...+++|+|..++|+..... 
T Consensus        57 ---------------~~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~~-  118 (294)
T TIGR02295        57 ---------------PSAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDG--GQPEALRVEDPFGYPIEFYFEMEK-  118 (294)
T ss_pred             ---------------CCcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCC--CCceEEEEECCCCCEEEEEEchhh-
Confidence                           1236789999997   8999999999999987655432  233677889999999999873111 


Q ss_pred             CCCCCCC-CCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEEcCCc
Q 016432          183 NHLDFLP-GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLANNDE  260 (389)
Q Consensus       183 ~~g~~lp-~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g  260 (389)
                        ..-++ .+.       ...+..+.+|+|+++.|+|++++.+||+++|||+........      .| ....++.....
T Consensus       119 --~~~~~~~~~-------~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~------~~~~~~~~~~~~~~  183 (294)
T TIGR02295       119 --VERLLRRYH-------RHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDD------EGNLAAAWLHRKGG  183 (294)
T ss_pred             --ccccccccc-------ccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC------CCcEEEEEEecCCC
Confidence              00011 110       112346889999999999999999999999999987543211      12 12222222212


Q ss_pred             ceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCce--ecCCCChhhhHhHhhhh
Q 016432          261 MVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFE--FMPSPPPTYYKNLKNRA  335 (389)
Q Consensus       261 ~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~--~l~~P~~~YY~~l~~r~  335 (389)
                      ...+.+..                 ..++|++|+||.|+|   +.+..++|+++    |++  +...| .        |-
T Consensus       184 ~~~~~~~~-----------------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~----G~~~~~~~~p-~--------~~  233 (294)
T TIGR02295       184 VHDIALTN-----------------GNGPRLHHIAYWVHDPLNIIKACDILASA----GLSDSIERGP-G--------RH  233 (294)
T ss_pred             cCceEeec-----------------CCCCceeeEEEEcCCHHHHHHHHHHHHhC----CCCcccccCC-c--------cC
Confidence            22222211                 134689999999999   55678999999    987  33333 1        11


Q ss_pred             CCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          336 GDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       336 ~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                      +.          ...-.+|=+|.+|.++.+++.++
T Consensus       234 ~~----------~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       234 GV----------SNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             CC----------CcceEEEEECCCCCEEEEEeccc
Confidence            10          00011455688999999999885

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.86  E-value=1.6e-19  Score=173.97  Aligned_cols=252  Identities=16%  Similarity=0.119  Sum_probs=161.1

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+++||.|.|+|++++++||++.|||++....+  .+.    . .++.+  ...+.+...  +                
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~~----~-~~~~~~~~~~~~l~~~--~----------------   55 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--NDA----L-YLRLDSRAHRIAVHPG--E----------------   55 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cce----E-EEEcCCCceEEEEEEC--C----------------
Confidence            5789999999999999999999999999764321  111    2 22333  445655431  0                


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCee---ccCceEEEEEEecCCeEEEEeecCCC
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVI---LDNLAVIAEVQLYGDVVLRYVSYKDK  181 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~---~~~~~~~~~v~~~gg~~~~fve~~~~  181 (389)
                                    ..++.+++|.|+|   ++++.++|+++|+++...|..   ..+......+++|+|..++|+.....
T Consensus        56 --------------~~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~  121 (286)
T TIGR03213        56 --------------SDDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVE  121 (286)
T ss_pred             --------------cCCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccc
Confidence                          1256789999998   899999999999998765531   12334678889999999998862111


Q ss_pred             CCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCc--eEEEEEcCC
Q 016432          182 ANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL--NSVVLANND  259 (389)
Q Consensus       182 ~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~--~s~~~~~~~  259 (389)
                      .....+..   +.. .. .. .....+|+||++.|+|++++++||+++|||++......+.    ..|.  ...++.+.+
T Consensus       122 ~~~~~~~~---~~~-~~-~~-~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~----~~g~~~~~~~l~~~~  191 (286)
T TIGR03213       122 DFEKPFVS---PRA-VS-GF-VTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPA----GPGVTVRPYFLHCNE  191 (286)
T ss_pred             cCCCCCCC---CCC-CC-cc-ccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccC----CCCCcceEEEEEECC
Confidence            00001111   000 00 01 1236899999999999999999999999999875533211    1121  223444332


Q ss_pred             cceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHH---HHHHHHHhcCCCCceecCCCChhhhHhHhhhhC
Q 016432          260 EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFR---TLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAG  336 (389)
Q Consensus       260 g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~---a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~  336 (389)
                      ....+.+....                ...|++||||.|+|+.+   .+++|+++    |+ ....| .        |-+
T Consensus       192 ~~~~~~l~~~~----------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~----G~-~~~~~-~--------r~~  241 (286)
T TIGR03213       192 RHHSLAFAAGP----------------SEKRLNHLMLEVDTLDDVGLALDRVDAD----GI-VASTL-G--------RHT  241 (286)
T ss_pred             CcceEEEecCC----------------CCCceEEEEEEcCCHHHHHHHHHHHHHC----CC-EEecC-C--------cCC
Confidence            33334332111                24579999999998776   89999999    98 33333 1        111


Q ss_pred             CCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          337 DVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       337 ~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                      .          ...--+|=+|.+|+++.++|--.
T Consensus       242 ~----------~~~~~~y~~DP~G~~iE~~~~~~  265 (286)
T TIGR03213       242 N----------DHMVSFYVATPSGWLVEYGWGAR  265 (286)
T ss_pred             C----------CCeEEEEEECCCCcEEEeecCcE
Confidence            0          00112455789999999998543

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.85  E-value=6.3e-20  Score=157.43  Aligned_cols=136  Identities=40%  Similarity=0.607  Sum_probs=113.9

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      |+||.|+|+|++++++||+++|||++..+...+ +   ..+..+.+|+..++|..+..+.                   .
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~-~---~~~~~~~~g~~~l~l~~~~~~~-------------------~   57 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE-D---KASYLLRQGDINFVLNSPLNSF-------------------A   57 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC-c---eEEEEEEcCCEEEEEecCCCCC-------------------C
Confidence            689999999999999999999999998875432 1   2356667889999988764332                   1


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCCCCCCCCCCCCCc
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFE  192 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~~~g~~lp~f~  192 (389)
                      ....++..++.|+.||||.|+|+++++++++++|++++.+|+..+...+.+.+++|+|..++|+++  .+|+|.|+|+|+
T Consensus        58 ~~~~~~~~~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~--~~~~~~~~~~~~  135 (136)
T cd08342          58 PVADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDR--KGYKGPFLPGFE  135 (136)
T ss_pred             chHHHHHhcCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEec--CCCCCccCCCCC
Confidence            334566778889999999999999999999999999999998855677899999999999999995  678899999997


Q ss_pred             c
Q 016432          193 P  193 (389)
Q Consensus       193 ~  193 (389)
                      |
T Consensus       136 ~  136 (136)
T cd08342         136 P  136 (136)
T ss_pred             C
Confidence            5

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=5.2e-15  Score=127.10  Aligned_cols=129  Identities=19%  Similarity=0.238  Sum_probs=94.1

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC-------Cc--eeEEEEEEE--cCCEEEEEEccCCCCCccccc
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST-------GN--TVHASYLLR--SGDLRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~-------g~--r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~   98 (389)
                      +.+++||+|+|+|++++++||++ |||+.......++       |.  ....+.++.  .|+..|+|.++..+....   
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~---   76 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIA---   76 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcC---
Confidence            47899999999999999999997 9998765432111       10  112334444  467889988865443100   


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432           99 AGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                             .      .  .....++.|+.||||.|+|+++++++++++|++++.+|....+..+...+++|+|..++|++
T Consensus        77 -------~------~--~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          77 -------D------H--RPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             -------c------C--CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence                   0      0  01122456899999999999999999999999998877655456778899999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.57  E-value=8.3e-14  Score=116.72  Aligned_cols=125  Identities=19%  Similarity=0.273  Sum_probs=92.8

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +|+||.++|+|++++++||++.|||+.......++.+  ...++++.|+..+.|.++....                   
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~i~l~~~~~~~-------------------   59 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQG--VKVVFIALGNTKVELLEPLGED-------------------   59 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCC--cEEEEEecCCEEEEEEecCCCC-------------------
Confidence            4899999999999999999999999987653222211  2356667778888887653222                   


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCC-CeeccCceEEEEE--EecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP-PVILDNLAVIAEV--QLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~-P~~~~~~~~~~~v--~~~gg~~~~fve  177 (389)
                      .....++..++.|+.||||.|+|+++++++++++|++++.+ |.....+.....+  ++|+|..++++|
T Consensus        60 ~~~~~~~~~~~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        60 SPIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             ChHHHHHhcCCCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            12344555667799999999999999999999999999875 6554344445555  688888887764

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.55  E-value=7.5e-14  Score=127.04  Aligned_cols=110  Identities=18%  Similarity=0.164  Sum_probs=87.3

Q ss_pred             cceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           30 VNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        30 i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+++||.++|+  |+++|++||+++|||++......++......+.++.  +|++.|+|++|..+..            
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~------------   68 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKR------------   68 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCC------------
Confidence            468999999999  999999999999999998876543322223344455  4679999998764210            


Q ss_pred             CCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec
Q 016432          106 LPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL  156 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~  156 (389)
                           .+.+..|+..| |.|+.||||.|+|+++++++++++|++++.+|...
T Consensus        69 -----~s~~~~fl~~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~y  115 (191)
T cd07250          69 -----KSQIQEFLEYYGGAGVQHIALATDDIFATVAALRARGVEFLPIPDNY  115 (191)
T ss_pred             -----ccHHHHHHHHhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCchhh
Confidence                 03678888887 78999999999999999999999999999888654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.54  E-value=3.2e-14  Score=117.42  Aligned_cols=97  Identities=24%  Similarity=0.443  Sum_probs=80.8

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      |||++.|+|+++++.||+++||++..+....+     ..+++..++..+++.+.|+|.+|..   ..    .+++. ++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~-----~~~v~~~~~~~~~~~~~iELi~p~~---~~----~~~~~-~~~   67 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDE-----PQGVRVAFLYLGDGPVQIELIQPLD---GD----SPLDR-GGG   67 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEG-----CTTEEEEEEEETTETEEEEEEEESS---TT----CHHHH-TSS
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecC-----CCCEEEEEEEeCCCcEEEEEEEeCC---CC----ccccc-CCC
Confidence            79999999999999999999999987665432     3567777788877779999999973   33    34555 688


Q ss_pred             CcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          290 GVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       290 GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      |++||||.|+||++++++|+++    |++++..+
T Consensus        68 gi~Hia~~v~D~d~~~~~l~~~----G~~~~~~~   97 (109)
T PF13669_consen   68 GIHHIAFEVDDLDAAIARLEAQ----GFRVLDEG   97 (109)
T ss_dssp             EEEEEEEEESHHHHHHHHHHHT----TECEEECE
T ss_pred             CEEEEEEEeCCHHHHHHHHHHC----CCEEcccC
Confidence            9999999999999999999999    99998765

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.54  E-value=2.1e-13  Score=116.91  Aligned_cols=98  Identities=21%  Similarity=0.310  Sum_probs=77.3

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      |||++++|+|++++++||+++|||++.++...+       +.....+.  ++.+.|.|..+.   ...+...++++. .+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~-------~~~~~~~~--~g~~~l~l~~~~---~~~~~~~~~~~~-~~   67 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE-------DKASYLLR--QGDINFVLNSPL---NSFAPVADFLEK-HG   67 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC-------ceEEEEEE--cCCEEEEEecCC---CCCCchHHHHHh-cC
Confidence            689999999999999999999999988764321       22233333  456778887665   334555667665 46


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .|++||||.|+||++++++|+++    |++++.+|
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~~----G~~v~~~p   98 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVAR----GAKPVQEP   98 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHc----CCeEccCc
Confidence            78999999999999999999999    99999988

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.53  E-value=2.8e-13  Score=113.15  Aligned_cols=124  Identities=18%  Similarity=0.208  Sum_probs=92.6

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC-CCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS-TGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~-~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      |+||.|+|+|++++++||.+.|||++......+ .+.  .....++.++..+.|.++..+..                  
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~------------------   60 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQG--VRVAFLGLGNVQIELIEPLDDDS------------------   60 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccc--cEEEEEEcCCEEEEEEEECCCCC------------------
Confidence            589999999999999999999999998765432 111  22456677899998887643321                  


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCe-eccCceEEEEEEecC--CeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPV-ILDNLAVIAEVQLYG--DVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~-~~~~~~~~~~v~~~g--g~~~~fve  177 (389)
                       ....+...++.|++|+||.|+|+++++++++++|++++.+|. ...+...+..+.+++  |..++|++
T Consensus        61 -~~~~~~~~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          61 -PIAKFLEKRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             -cHHHHHhcCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence             222334557789999999999999999999999999988775 323345566666666  77777764

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=1.5e-13  Score=117.94  Aligned_cols=110  Identities=16%  Similarity=0.194  Sum_probs=76.7

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccc-cc---c--ccCceEEEEEcCCcceEEEeccCCCCCCCCchH
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDV-GT---S--ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQI  279 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~-~~---~--~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i  279 (389)
                      +.+++|+++.|.|++++++||++ |||+.......++. ..   .  ..+.+...+..+++...|+|.++... ..... 
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~-~~~~~-   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHP-AVIAD-   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCC-CCcCc-
Confidence            46899999999999999999998 99987654332110 00   0  11234556666677888888765421 11100 


Q ss_pred             HHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          280 QTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       280 ~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.. .++.|++||||.|+|+++++++|+++    |++++.+|
T Consensus        78 ~~~~~-~~~~g~~hia~~v~d~d~~~~~l~~~----G~~~~~~~  116 (142)
T cd08353          78 HRPAP-VNALGLRRVMFAVDDIDARVARLRKH----GAELVGEV  116 (142)
T ss_pred             CCCCC-CCCCCceEEEEEeCCHHHHHHHHHHC----CCceeCCc
Confidence            01222 24678999999999999999999999    99999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.49  E-value=3.1e-13  Score=111.49  Aligned_cols=95  Identities=22%  Similarity=0.177  Sum_probs=75.7

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +||+|.|+|+++|++||++.||+++......+..  .....++..++  +.|+|.+|..+.                   
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~--~v~~~~~~~~~~~~~iELi~p~~~~-------------------   59 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQ--GVRVAFLYLGDGPVQIELIQPLDGD-------------------   59 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCT--TEEEEEEEETTETEEEEEEEESSTT-------------------
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCC--CEEEEEEEeCCCcEEEEEEEeCCCC-------------------
Confidence            7999999999999999999999998765432222  23455566665  899999987543                   


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCC
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPP  153 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P  153 (389)
                          .++..++.|++||||.|+|++++.++|+++|++++.++
T Consensus        60 ----~~~~~~~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   60 ----SPLDRGGGGIHHIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             ----CHHHHTSSEEEEEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             ----cccccCCCCEEEEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence                23455899999999999999999999999999988765

>PLN02367 lactoylglutathione lyase

Probab=99.49  E-value=7.5e-13  Score=122.67  Aligned_cols=128  Identities=13%  Similarity=0.144  Sum_probs=97.2

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-------------------cCCEEEEEEccCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-------------------SGDLRFVFTAPYSP   91 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-------------------~g~~~i~l~~p~~~   91 (389)
                      -.+.|+.+.|+|++++++||+++|||++..+.+.+++.  ...+++.                   .++..|+|..+.+.
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~--f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMK--FSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCc--EEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            57999999999999999999999999998876655433  2344442                   12357888876543


Q ss_pred             CCccccccCCCCCCCCCCChHHHHHHHHhcC--CceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecC
Q 016432           92 SISDAADAGNSSASLPTFDHAACRSFAASHG--LAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYG  169 (389)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg--~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~g  169 (389)
                      +.  +               ..+..|+...+  .|..||||.|+|+++++++++++|++++.+|.... ..+++++++|+
T Consensus       152 e~--~---------------~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~-~~riaFIkDPD  213 (233)
T PLN02367        152 ES--D---------------PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGK-MKGIAFIKDPD  213 (233)
T ss_pred             Cc--c---------------ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCC-ceEEEEEECCC
Confidence            21  0               12334544443  48999999999999999999999999998887543 25688999999


Q ss_pred             CeEEEEeec
Q 016432          170 DVVLRYVSY  178 (389)
Q Consensus       170 g~~~~fve~  178 (389)
                      |..++|++.
T Consensus       214 Gn~IEL~e~  222 (233)
T PLN02367        214 GYWIEIFDL  222 (233)
T ss_pred             CCEEEEEec
Confidence            999999984

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.48  E-value=8.6e-13  Score=119.28  Aligned_cols=128  Identities=13%  Similarity=0.143  Sum_probs=92.4

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-------------------cCCEEEEEEccCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-------------------SGDLRFVFTAPYSP   91 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-------------------~g~~~i~l~~p~~~   91 (389)
                      ..+.|+.|+|.|++++++||+++|||++..+...+++.  ...+++.                   .++..|+|..+...
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~--~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~  103 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGT  103 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCc--eEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCC
Confidence            45999999999999999999999999998775443332  2233332                   23457888875432


Q ss_pred             CCccccccCCCCCCCCCCChHHHHHHHHhc--CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecC
Q 016432           92 SISDAADAGNSSASLPTFDHAACRSFAASH--GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYG  169 (389)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h--g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~g  169 (389)
                      .+.                 ....+|....  +.|+.||||+|+|+++++++++++|+++...|.... ..++.++++|+
T Consensus       104 ~~~-----------------p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~-~~~~~fi~DPd  165 (185)
T PLN03042        104 ESD-----------------PEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK-MKGLAFIKDPD  165 (185)
T ss_pred             ccc-----------------ccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC-ceeEEEEECCC
Confidence            210                 0111232222  248999999999999999999999999887775432 35678889999


Q ss_pred             CeEEEEeec
Q 016432          170 DVVLRYVSY  178 (389)
Q Consensus       170 g~~~~fve~  178 (389)
                      |..++|++.
T Consensus       166 G~~IEl~e~  174 (185)
T PLN03042        166 GYWIEIFDL  174 (185)
T ss_pred             CCEEEEEEC
Confidence            999999984

>PRK11478 putative lyase; Provisional

Probab=99.48  E-value=8.3e-13  Score=111.14  Aligned_cols=127  Identities=15%  Similarity=0.109  Sum_probs=86.6

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +.+.+++||.++|+|++++++||++.|||++......+....+. ..+.-.|+..+.|.+...+...+            
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~------------   68 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALNGQYVIELFSFPFPPERP------------   68 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecCCCcEEEEEEecCCCCCC------------
Confidence            35788999999999999999999999999986432111111111 11222456667666532221100            


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                           .     ..+..|+.||||.|+|+++++++++++|+++...+........+..+++|+|..+++++
T Consensus        69 -----~-----~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         69 -----S-----RPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             -----C-----CCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence                 0     01234789999999999999999999999976443332234567888999999998876

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.44  E-value=9.4e-13  Score=130.87  Aligned_cols=114  Identities=15%  Similarity=0.141  Sum_probs=90.0

Q ss_pred             CCCCcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccccCC
Q 016432           26 DRFRVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ..+.+.+++||.++|+  |+++++.||+++|||++..+...++......+.++.  .|++.|.|++|.....        
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~--------  223 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKD--------  223 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCC--------
Confidence            4567899999999999  999999999999999998876543322222233344  4779999998753210        


Q ss_pred             CCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec
Q 016432          102 SSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL  156 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~  156 (389)
                               .+.+.+|+..| |.|+.||||+|+|+++++++|+++|++++.+|...
T Consensus       224 ---------~s~i~~fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~y  270 (353)
T TIGR01263       224 ---------KSQIEEFLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTY  270 (353)
T ss_pred             ---------CCHHHHHHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHH
Confidence                     03678899888 78999999999999999999999999999888653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=2.3e-12  Score=106.83  Aligned_cols=125  Identities=17%  Similarity=0.131  Sum_probs=86.6

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+++||+|.|.|++++++||++.|||+.........+..+ ...+...++..+++........            .   
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~-~~~~~~~~~~~i~l~~~~~~~~------------~---   64 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSY-KLDLLLNGGYQLELFSFPNPPE------------R---   64 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcE-EEEEecCCCcEEEEEEcCCCCC------------C---
Confidence            36899999999999999999999999998765322221222 1222234566666654322110            0   


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                         ..    ...+.|+.|+||+|+|+++++++|+++|+++..+|...........+++|+|..+++++
T Consensus        65 ---~~----~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          65 ---PS----YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             ---CC----CCcCCCceEEEEEeCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence               00    01234889999999999999999999999987766543334557778899999888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.39  E-value=3.3e-12  Score=127.40  Aligned_cols=111  Identities=14%  Similarity=0.161  Sum_probs=88.1

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC-C--ceeEEEEEEEc--CCEEEEEEccCCCCCccccccCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST-G--NTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~-g--~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ..++.+||||.++|++++.++.||.+.|||+..+....++ +  ...+.+.++..  |.+.|.|++|..... .      
T Consensus       175 ~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~-~------  247 (398)
T PLN02875        175 DYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTK-R------  247 (398)
T ss_pred             CCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCC-C------
Confidence            3458899999999999999999999999999887543221 1  11234666676  459999999864210 0      


Q ss_pred             CCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHC----CCcccCCC
Q 016432          102 SSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAH----GAKPSSPP  153 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~----Ga~~i~~P  153 (389)
                               .+++.+||+.+ |+||+||||+|+|+.+++++|+++    |++++..|
T Consensus       248 ---------~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        248 ---------KSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             ---------cChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence                     04899999999 589999999999999999999999    99998865

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.38  E-value=8.1e-12  Score=110.56  Aligned_cols=128  Identities=15%  Similarity=0.117  Sum_probs=88.6

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEec--CCC------------Cc--eeEEEEEEEcC-CEEEEEEccCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSD--LST------------GN--TVHASYLLRSG-DLRFVFTAPYSPSI   93 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~--~~~------------g~--r~~~~~~~~~g-~~~i~l~~p~~~~~   93 (389)
                      .+++||.+.|+|+++|++||+++|||++..+..  .+.            |.  ......+++.+ +..|+|.++.++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            679999999999999999999999998764210  000            11  11334555543 46688887654331


Q ss_pred             ccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCC-Ceec-c--CceEEEEEEecC
Q 016432           94 SDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP-PVIL-D--NLAVIAEVQLYG  169 (389)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~-P~~~-~--~~~~~~~v~~~g  169 (389)
                                         +...+ ..++.|..|+||.|+|+++++++++++|++++.+ |... .  .......+++|+
T Consensus        83 -------------------~~~~~-~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPd  142 (162)
T TIGR03645        83 -------------------PEDNF-EYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPF  142 (162)
T ss_pred             -------------------CCccc-ccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCC
Confidence                               00111 1235689999999999999999999999876543 3211 1  124678899999


Q ss_pred             CeEEEEeec
Q 016432          170 DVVLRYVSY  178 (389)
Q Consensus       170 g~~~~fve~  178 (389)
                      |..++|+++
T Consensus       143 G~~iEl~~~  151 (162)
T TIGR03645       143 GNILEIYSH  151 (162)
T ss_pred             CCEEEEEEc
Confidence            999999984

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.37  E-value=5.2e-12  Score=105.71  Aligned_cols=101  Identities=28%  Similarity=0.457  Sum_probs=75.1

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +|+|+++.|.|++++++||+++|||+.......+     ..+....++..+  ...+.|..+.   ...+.+..++..+ 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~--~~~i~l~~~~---~~~~~~~~~~~~~-   69 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVP-----EQGVKVVFIALG--NTKVELLEPL---GEDSPIAKFLEKN-   69 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCC-----CCCcEEEEEecC--CEEEEEEecC---CCCChHHHHHhcC-
Confidence            5899999999999999999999999986543211     124444555443  3456666543   2334455666654 


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      +.|++||||.|+|+++++++|+++    |++++..+
T Consensus        70 ~~g~~~i~~~v~di~~~~~~l~~~----G~~~~~~~  101 (128)
T TIGR03081        70 GGGIHHIAIEVDDIEAALETLKEK----GVRLIDEE  101 (128)
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHC----CCcccCCC
Confidence            568999999999999999999999    99998753

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PLN02367 lactoylglutathione lyase

Probab=99.35  E-value=1.6e-11  Score=113.83  Aligned_cols=134  Identities=12%  Similarity=0.280  Sum_probs=93.1

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-----------------CcceEEEeccC
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-----------------DEMVLLPMNEP  269 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-----------------~g~v~l~l~e~  269 (389)
                      -.+.|+.+.|.|++++++||+++|||++....+.++     .+.+...+..+                 .+...|+|..+
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe-----~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n  148 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPE-----MKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHN  148 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCC-----CcEEEEEeecCCccccccccccceeeccCCCCEEEEecC
Confidence            568999999999999999999999999887665432     23333334211                 12346777665


Q ss_pred             CCCCCCCchHHHHHhhcC-CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHH
Q 016432          270 VFGTKRKSQIQTYLEHNE-GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCE  348 (389)
Q Consensus       270 ~~~~~~~s~i~~fl~~~~-g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~  348 (389)
                      ... ...+.+..|+..++ ..|++||||.|+||++++++|+++    |++++..| ..         +.           
T Consensus       149 ~g~-e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~----Gv~~v~~P-~~---------g~-----------  202 (233)
T PLN02367        149 WGT-ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEEL----GVEFVKKP-ND---------GK-----------  202 (233)
T ss_pred             CCC-CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHC----CCEEEeCC-cc---------CC-----------
Confidence            421 22234556765532 258999999999999999999999    99999877 31         10           


Q ss_pred             HcCceeecCCCceEEEEeccccC
Q 016432          349 ELGVLVDRDDQGTLLQIFTKPVG  371 (389)
Q Consensus       349 ~~~IL~D~D~~g~llqift~~~~  371 (389)
                      -.++.+=+|.+|+++.|+..+..
T Consensus       203 ~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        203 MKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ceEEEEEECCCCCEEEEEecccc
Confidence            01344448889999998876543

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.33  E-value=3.5e-11  Score=99.68  Aligned_cols=117  Identities=17%  Similarity=0.194  Sum_probs=83.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc----CCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS----GDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~----g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++||.++|+|++++++||++.|||++......+++..  ..+.+..    +...+.+..+.....               
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~~---------------   63 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKF--TLVFLGYPDEDSEGVLELTYNWGTEE---------------   63 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCce--EEEEecCCCCCCccEEEEEecCCCCC---------------
Confidence            5899999999999999999999999887643222211  1233333    235566654321100               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                          .     ...+.++.|++|.|+|+++++++++++|+++..+|... +......+++|+|..++++
T Consensus        64 ----~-----~~~~~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          64 ----P-----YDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDG-GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             ----C-----cCCCCCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccC-CCceEEEEECCCCCEEEeC
Confidence                0     01244788999999999999999999999998888754 3445777888999888774

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.32  E-value=2.2e-11  Score=110.07  Aligned_cols=132  Identities=14%  Similarity=0.303  Sum_probs=86.4

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-----------------CcceEEEeccC
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-----------------DEMVLLPMNEP  269 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-----------------~g~v~l~l~e~  269 (389)
                      -+++|+++.|.|+++++.||+++|||+...+...++     .+.+...+...                 .+...|+|.++
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~-----~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~  100 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHN  100 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCC-----CceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEc
Confidence            569999999999999999999999999877654321     23333333211                 12346777654


Q ss_pred             CCCCCCCchHHHHHhhc-CCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHH
Q 016432          270 VFGTKRKSQIQTYLEHN-EGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCE  348 (389)
Q Consensus       270 ~~~~~~~s~i~~fl~~~-~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~  348 (389)
                      ... .....+..|.... .+.|+.||||.|+||++++++|+++    |++++..| ..         +.           
T Consensus       101 ~~~-~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~----Gv~v~~~p-~~---------~~-----------  154 (185)
T PLN03042        101 WGT-ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKL----GVEFVKKP-DD---------GK-----------  154 (185)
T ss_pred             CCC-cccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHC----CCeEEeCC-cc---------CC-----------
Confidence            311 1111233344332 2358999999999999999999999    99998766 32         10           


Q ss_pred             HcCceeecCCCceEEEEeccc
Q 016432          349 ELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       349 ~~~IL~D~D~~g~llqift~~  369 (389)
                      ...+.+=.|.+|+++++....
T Consensus       155 ~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        155 MKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             ceeEEEEECCCCCEEEEEECC
Confidence            012334467788777776644

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.31  E-value=6.2e-11  Score=101.88  Aligned_cols=115  Identities=10%  Similarity=0.048  Sum_probs=86.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      |.+++||.+.|+|++++++||++.|||++..+.+        ....++.++..+.+..+....                 
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~--------~~~~~~~~g~~l~l~~~~~~~-----------------   56 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR--------KTAYFDLNGLWIALNEEKDIP-----------------   56 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC--------eeEEEecCCeEEEeeccCCCC-----------------
Confidence            6789999999999999999999999999875421        133456677777765421100                 


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                         .     ...+.|..|+||.|+  |+++++++++++|++++.+|...........+++|+|..+++..
T Consensus        57 ---~-----~~~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~  118 (139)
T PRK04101         57 ---R-----NEIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHT  118 (139)
T ss_pred             ---C-----ccCCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEe
Confidence               0     001336889999998  99999999999999987766543344567788999999999886

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.31  E-value=9.5e-11  Score=102.03  Aligned_cols=123  Identities=20%  Similarity=0.193  Sum_probs=86.1

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--C--EEEEEEccCCCCCccccccCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--D--LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~--~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ..++++||.|.|+|++++++||++.|||++......+.+.  ...+.+..+  .  ..+.+.......            
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~------------   79 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMK--FSLAFLGYGDETSAAVIELTHNWGTE------------   79 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCc--eEEEEecCCCCCCccEEEEeecCCCC------------
Confidence            5688999999999999999999999999987654322221  112333322  1  233333211100            


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEecCCeEEEEeec
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~gg~~~~fve~  178 (389)
                              .     ...+.|+.|++|.|+|++++++++.++|++++.+|...+. ......+++|+|..++|+++
T Consensus        80 --------~-----~~~~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (150)
T TIGR00068        80 --------K-----YDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQR  141 (150)
T ss_pred             --------c-----ccCCCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEC
Confidence                    0     0124588999999999999999999999998887753332 34567789999999999984

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.29  E-value=2.7e-11  Score=107.21  Aligned_cols=138  Identities=19%  Similarity=0.243  Sum_probs=84.9

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEE--eccccc--c---------cccCceEEEEEcCCcceEEEeccCCCC
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEF--TAEDVG--T---------SESGLNSVVLANNDEMVLLPMNEPVFG  272 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~--~~~d~~--~---------~~~g~~s~~~~~~~g~v~l~l~e~~~~  272 (389)
                      .++||||+++|.|+++++.||+++|||+...+.  ..++..  .         ...+++...+..+ +...|+|.+... 
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~ieL~~~~~-   79 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTG-DRIGVELFEFKN-   79 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecC-CCCcEEEEeccC-
Confidence            367999999999999999999999999874321  111100  0         0111444445443 344577766542 


Q ss_pred             CCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCc
Q 016432          273 TKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGV  352 (389)
Q Consensus       273 ~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~I  352 (389)
                        ..+....+..  .+.|++|+||.|+||++++++|+++    |+.++..+|...+      .+     ..     ....
T Consensus        80 --~~~~~~~~~~--~~~g~~Hla~~v~dida~~~~l~~~----G~~~~~~~~~~~~------~~-----~~-----~~~~  135 (162)
T TIGR03645        80 --QENPEDNFEY--WKTGVFHFCVQDPDVEGLAERIVAA----GGKKRMPVPRYYY------PG-----EK-----PYRM  135 (162)
T ss_pred             --CCCCCccccc--ccccceEEEEEcCCHHHHHHHHHHc----CCcccCCCccccC------CC-----CC-----ceEE
Confidence              1111122211  3578999999999999999999999    9876543312111      00     00     0134


Q ss_pred             eeecCCCceEEEEeccc
Q 016432          353 LVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       353 L~D~D~~g~llqift~~  369 (389)
                      ++=+|.+|+++.+++++
T Consensus       136 ~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645       136 IYMEDPFGNILEIYSHS  152 (162)
T ss_pred             EEEECCCCCEEEEEEcC
Confidence            56677888888877765

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.27  E-value=6.3e-11  Score=98.43  Aligned_cols=119  Identities=14%  Similarity=0.083  Sum_probs=80.4

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEec-CCCCceeEEEEEEEc-CCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSD-LSTGNTVHASYLLRS-GDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~-~~~g~r~~~~~~~~~-g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +++||.|+|+|++++++||++.|||++..... ...+.   ..+.+.. ++..+.|.+......                
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~----------------   61 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGF---ESYFLSFDDGARLELMTRPDIAP----------------   61 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCc---eEEEEecCCCcEEEEEcCcccCC----------------
Confidence            47999999999999999999999999764422 12221   1223332 456677765311110                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEE
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRY  175 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~f  175 (389)
                        ..    ......|..||||.|+   |+++++++++++|+++..+|...........+++|+|..++|
T Consensus        62 --~~----~~~~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~  124 (125)
T cd07241          62 --SP----NEGERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEI  124 (125)
T ss_pred             --Cc----ccCCCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEe
Confidence              00    0112348899999995   589999999999999887775433333345578899988766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.27  E-value=1.4e-10  Score=96.01  Aligned_cols=117  Identities=21%  Similarity=0.158  Sum_probs=87.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACR  115 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (389)
                      +.|+|+|++++++||++.|||++......+++..  ....+..++..+.+..+....                    .  
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~--~~~~l~~~~~~~~l~~~~~~~--------------------~--   60 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRV--MHAELRIGDSVLMLADEFPEH--------------------G--   60 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCE--EEEEEEECCEEEEEecCCccc--------------------C--
Confidence            5689999999999999999999987765344432  233455677777777542111                    0  


Q ss_pred             HHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          116 SFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       116 ~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       ....++.+..+++|.|+|++++++++.+.|++++.+|.....+.+...+++|+|..+.|.+
T Consensus        61 -~~~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          61 -SPASWGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             -CCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence             0112345677999999999999999999999999888765566778889999999988865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.27  E-value=2.7e-11  Score=100.48  Aligned_cols=127  Identities=18%  Similarity=0.175  Sum_probs=83.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +|+||.++|+|++++++||++.|||+++................++.++..+.+.....+.....               
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------------   65 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRAS---------------   65 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSE---------------
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeecccccccc---------------
Confidence            68999999999999999999999999998765211223455667777664444433322221000               


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEE-EEEEecCCeEEEE
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVI-AEVQLYGDVVLRY  175 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~-~~v~~~gg~~~~f  175 (389)
                       . ..+...+..++.++++.++|++++++++++.|+++..+|......... ..+++|+|..++|
T Consensus        66 -~-~~~~~~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   66 -G-HSFPEHGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             -E-EHHHSHTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             -c-cccccccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence             0 000101233566666666789999999999999998887654443333 4588899988765

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.26  E-value=8.9e-11  Score=97.93  Aligned_cols=101  Identities=26%  Similarity=0.474  Sum_probs=75.8

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      |+||++.|.|++++.+||+++|||+.......+    ...+.....+..  +...+.|..+.   ...+....+... .+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~--~~~~l~l~~~~---~~~~~~~~~~~~-~~   70 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVP----PEQGVRVAFLGL--GNVQIELIEPL---DDDSPIAKFLEK-RG   70 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccC----cccccEEEEEEc--CCEEEEEEEEC---CCCCcHHHHHhc-CC
Confidence            589999999999999999999999997654321    012234455554  45667776654   223344444443 57


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .|+.|+||.|+|+.+++++|+++    |++++.+|
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~~----G~~~~~~~  101 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKAQ----GVRLLQEG  101 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHC----CCeeeccC
Confidence            89999999999999999999999    99999877

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.26  E-value=1.7e-10  Score=98.15  Aligned_cols=118  Identities=13%  Similarity=0.078  Sum_probs=82.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+++||.+.|+|++++++||++.|||++..+.+.. +........+..|+..+.+.....+                  
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~i~l~~~~~~------------------   62 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDK-TFSLSKEKFFLIGGLWIAIMEGDSL------------------   62 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccc-cccccceeEEEcCCeEEEEecCCCC------------------
Confidence            678999999999999999999999999887653211 1000111223356667776542111                  


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                 ...++.|+||.|+  |+++.+++|+++|+++..++....+..+...+++|+|..++|..
T Consensus        63 -----------~~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~  121 (131)
T cd08364          63 -----------QERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHT  121 (131)
T ss_pred             -----------CCCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEec
Confidence                       1126889999998  79999999999999865332222223457788899999988875

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.25  E-value=2.2e-10  Score=95.49  Aligned_cols=124  Identities=19%  Similarity=0.184  Sum_probs=84.6

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      +.|+.|+|+|++++.+||.+.|||++....+  ++    ....+..++..+.+........           ..+.   .
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~   60 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SG----DYGELETGETTLAFASHDLAES-----------NLKG---G   60 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CC----cEEEecCCcEEEEEEccccccc-----------cccc---C
Confidence            4799999999999999999999999875432  11    1233456776666654321100           0000   0


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      ........++ +..+++|+|+|+++++++++++|++++.+|...+.+.+...+++|+|..+.+++
T Consensus        61 ~~~~~~~~~~-~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          61 FVKADPAQPP-AGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCS  124 (125)
T ss_pred             ccCCccccCC-CcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEec
Confidence            0000111233 345899999999999999999999998888766556667888999999888865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.24  E-value=1.4e-11  Score=102.19  Aligned_cols=128  Identities=24%  Similarity=0.360  Sum_probs=86.9

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +|+|++++|.|++++++||+++|||++.+......   .........+......+.+..+.....  ..... .+... .
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~-~~~~~-~   73 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDG---EGGDLRIAFLRIGEGHIELFLNPSPPP--RASGH-SFPEH-G   73 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEES---TTEEEEEEEEESTSSCEEEEEEESSSS--SSEEE-HHHSH-T
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeecccc---ccccccceeecccccceeeeeeccccc--ccccc-ccccc-c
Confidence            68999999999999999999999999988765211   112245566677777888887766532  22111 11111 2


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEE
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI  365 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqi  365 (389)
                      ..++.|+++.++|+.+++++|++.    |+++..+| ..+|.      +            .....|-+|++|+++++
T Consensus        74 ~~~i~~~~~~~~dl~~~~~~l~~~----g~~~~~~~-~~~~~------~------------~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   74 GHHIAFLAFDVDDLDAAYERLKAQ----GVEIVEEP-DRYYF------G------------SGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SEEEEEEESSHHHHHHHHHHHHHT----TGEEEEEE-EEHST------T------------CEEEEEEEETTSEEEEE
T ss_pred             ceeEEEEeccHHHHHHHHHHHhhc----CccEEecC-CCCCC------C------------CEEEEEEECCCCCEEEC
Confidence            334555555666889999999999    99999988 55541      1            00112578888988875

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.24  E-value=2.6e-10  Score=95.06  Aligned_cols=119  Identities=18%  Similarity=0.101  Sum_probs=85.1

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACR  115 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (389)
                      -.|.|+|++++++||++.|||++......+.+.  .....++.++..+++........                   . .
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~l~~~~~~~~-------------------~-~   60 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGG--VAHAELRFGDGGVMVGSVRDDYR-------------------A-S   60 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCc--EEEEEEEECCEEEEEecCCCccc-------------------c-c
Confidence            368899999999999999999998765333332  22334455677777764321110                   0 0


Q ss_pred             HHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          116 SFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       116 ~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      . ....+.+..+++|.|+|+++++++++++|++++.+|...+.+.....+++|+|..+.|.+
T Consensus        61 ~-~~~~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          61 S-ARAGGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             c-cccCCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence            0 012334667899999999999999999999999888776556677889999999887753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.23  E-value=1.9e-10  Score=96.50  Aligned_cols=118  Identities=18%  Similarity=0.182  Sum_probs=86.2

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhc---CCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGL---GMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~l---GF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +|+||.+.|+|++++++||++.|   ||++....+  .+.    .+....++..|.|.++.....               
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~~----~~~~~~~~~~i~l~~~~~~~~---------------   59 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DGR----SWRAGDGGTYLVLQQADGESA---------------   59 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cCc----eEEecCCceEEEEEecccCCC---------------
Confidence            58999999999999999999999   999887642  111    111115778888887543221               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec---cCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~---~~~~~~~~v~~~gg~~~~fve  177 (389)
                          .   ....++.|+.|+||.|+   |+++++++++++|+++...|...   ........+++|+|..++|+-
T Consensus        60 ----~---~~~~~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          60 ----G---RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             ----c---ccccCCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence                0   11234568999999997   58999999999999988776542   234556777889999888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.23  E-value=1e-10  Score=98.30  Aligned_cols=102  Identities=18%  Similarity=0.257  Sum_probs=66.4

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+++.|+|++++++||+++|||++......++    ...... .+.. ++...++|.+.... ....      .
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~----~~~~~~-~~~~-~~~~~l~l~~~~~~-~~~~------~   69 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREA----RDSWKG-DLAL-NGQYVIELFSFPFP-PERP------S   69 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccc----ccccee-eEec-CCCcEEEEEEecCC-CCCC------C
Confidence            47889999999999999999999999999864321110    000111 1112 23444555432110 0000      0


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .....|++||||.|+|+++++++|+++    |+++.+.+
T Consensus        70 ~~~~~g~~hi~f~v~d~~~~~~~l~~~----G~~~~~~~  104 (129)
T PRK11478         70 RPEACGLRHLAFSVDDIDAAVAHLESH----NVKCEAIR  104 (129)
T ss_pred             CCCCCceeEEEEEeCCHHHHHHHHHHc----CCeeeccc
Confidence            112457999999999999999999999    99987543

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.23  E-value=1.4e-10  Score=95.97  Aligned_cols=120  Identities=18%  Similarity=0.150  Sum_probs=85.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      |.+|+||.+.|+|++++++||.+.|||+.....+..      ....++.++..+.+.....+..                
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~----------------   58 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV------GRKALRFGSQKINLHPVGGEFE----------------   58 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC------CceEEEeCCEEEEEecCCCccC----------------
Confidence            468999999999999999999999999988654311      1233455666777765322110                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcC-HHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVED-ADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~D-vda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve  177 (389)
                         +   .....+.|..|+||.|++ +++++++++++|++++.+|....+   ......+++|+|..+++++
T Consensus        59 ---~---~~~~~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          59 ---P---AAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             ---c---CccCCCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence               0   001134588999999985 999999999999998877654322   2356678899999888765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.22  E-value=1.7e-10  Score=94.59  Aligned_cols=116  Identities=14%  Similarity=0.219  Sum_probs=83.5

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--C-CEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--G-DLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g-~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      ||.+.|.|++++++||++.|||++..+.....+.   ....+..  + ++.|.+..+..+.+                  
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~------------------   59 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGF---RWVTVAPPGSPETSLVLAPPANPAA------------------   59 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCc---EEEEEeCCCCCeeEEEEeCCCCccc------------------
Confidence            8999999999999999999999998775422222   2333432  2 56777765432210                  


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       .    ...++.+..+++|.|+|+++++++++++|+++..+|... .......+++|+|..+.|++
T Consensus        60 -~----~~~~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          60 -M----SGLQPGGTPGLVLATDDIDATYEELKARGVEFSEEPREM-PYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             -c----ccccCCCceEEEEEehHHHHHHHHHHhCCCEEeeccccC-CCceEEEEECCCCCEEEEeC
Confidence             0    112345788999999999999999999999998888433 23456778889998887763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.22  E-value=3.7e-10  Score=92.79  Aligned_cols=113  Identities=16%  Similarity=0.103  Sum_probs=81.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +.||.|.|+|++++++||++.|||+...... +. .   ...++..++ ..+.+.....+.                   
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~-------------------   56 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG-G---DYAVFSTGGGAVGGLMKAPEPA-------------------   56 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC-C---ceEEEEeCCccEEEEecCCCCC-------------------
Confidence            4799999999999999999999999875542 11 1   234555554 333332211000                   


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                              ..+.+..+++|.|+|+++++++|+++|++++.+|...++......+++|+|..+.|++
T Consensus        57 --------~~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          57 --------AGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             --------CCCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence                    0123566899999999999999999999998888765545567888899999888763

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.22  E-value=4.1e-10  Score=97.55  Aligned_cols=116  Identities=13%  Similarity=0.022  Sum_probs=79.0

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EE-EEEEccCCCCCccccccCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LR-FVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~-i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+.+|+||.+.|+|++++++||++.|||++..+...+++.....+ .++.++ .. +.+..                   
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~-~l~~~~~~h~~~~~~-------------------   62 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGS-FLSCSNKPHDIAFVG-------------------   62 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEE-EEecCCCcceEEEec-------------------
Confidence            467899999999999999999999999998765422223221112 222222 11 11111                   


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                   ..+.++.|+||+|+|+++   +.+++.++|+++...|.... +......+++|+|..++|..
T Consensus        63 -------------~~~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          63 -------------GPDGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             -------------CCCCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence                         012378899999999877   67899999998765654211 23456778899999999976

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.22  E-value=2.3e-10  Score=94.73  Aligned_cols=115  Identities=18%  Similarity=0.126  Sum_probs=81.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      ++.++|+|++++++||++.|||+.....+      + .+.+...++ +.|.+..+..+..                   +
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~-~~~~~~~~~~~~l~l~~~~~~~~-------------------~   57 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------W-YVSLRSPDGGVELAFMLPGHETV-------------------P   57 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------c-EEEEecCCCceEEEEccCCCCCC-------------------c
Confidence            57899999999999999999999886421      1 123333333 6666654321110                   0


Q ss_pred             HHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          114 CRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       .......+.++ +++|.|+|+++++++++++|++++.+|...+.+.+...+++|+|..++|++
T Consensus        58 -~~~~~~~~~~~-~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          58 -AAQYQFQGQGL-ILNFEVDDVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             -chhcccCCceE-EEEEEECCHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence             00112234455 799999999999999999999988888765555667788999999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.20  E-value=8.4e-11  Score=103.00  Aligned_cols=123  Identities=18%  Similarity=0.181  Sum_probs=79.7

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +|+||++.|+|++++++||+++|||+.......+.    ..+....++...++...          .....+.  +....
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~----~~~~~~~~l~~~~~~~~----------~~~~~~~--l~~~~   64 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPG----PGNPVAAFLRLDRGEEY----------VDHHTLA--LAQGP   64 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCC----CCCcEEEEEecCCCCCc----------ccchHHH--HhcCC
Confidence            58999999999999999999999999865433210    01233344443322110          0111222  12223


Q ss_pred             CCCcceEEEEeCCHHHHH---HHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          288 GAGVQHLALVSEDIFRTL---REMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~---~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                      +.|++||||.|+|++++.   ++|+++    |++++..| ..-.      .+            ..-.+|=+|.+|+++.
T Consensus        65 ~~g~~Hiaf~v~die~~~~~~~~L~~~----Gv~v~~~~-g~~~------~g------------~~~~~y~~DPdG~~iE  121 (153)
T cd07257          65 ESGVHHAAFEVHDFDAQGLGHDYLREK----GYEHVWGV-GRHI------LG------------SQIFDYWFDPWGFIVE  121 (153)
T ss_pred             CCceeEEEEEcCCHHHHHHHHHHHHHC----CCcEeecC-CccC------CC------------CCEEEEEECCCCCEEE
Confidence            578999999999999886   999999    99988765 2100      01            0012466788899999


Q ss_pred             Eeccc
Q 016432          365 IFTKP  369 (389)
Q Consensus       365 ift~~  369 (389)
                      +|...
T Consensus       122 l~~~~  126 (153)
T cd07257         122 HYTDG  126 (153)
T ss_pred             EEcCc
Confidence            99765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.18  E-value=2.4e-10  Score=94.60  Aligned_cols=97  Identities=18%  Similarity=0.296  Sum_probs=70.4

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      |+|+++.|+|++++++||+++|||++.+....++     .+.....+..++  +...+.+..+..   ....      ..
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~l~~~~~---~~~~------~~   66 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPE-----GKFTLVFLGYPDEDSEGVLELTYNWG---TEEP------YD   66 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCC-----CceEEEEecCCCCCCccEEEEEecCC---CCCC------cC
Confidence            6899999999999999999999999887654221     123334455444  455566544321   1000      11


Q ss_pred             CCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          287 EGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       287 ~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+.+++|++|.|+||++++++|+++    |++++..|
T Consensus        67 ~~~~~~~i~~~v~did~~~~~l~~~----G~~~~~~~   99 (121)
T cd07233          67 NGNGFGHLAFAVDDVYAACERLEEM----GVEVTKPP   99 (121)
T ss_pred             CCCCeEEEEEEeCCHHHHHHHHHHC----CCEEeeCC
Confidence            3457999999999999999999999    99999987

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.17  E-value=9.9e-10  Score=97.60  Aligned_cols=120  Identities=15%  Similarity=0.119  Sum_probs=81.9

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.|.+|+||.|+|+|++++++||++.|||++......+.+..  ....+..+  ...+.+...  +.             
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~l~~~--~~-------------   64 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKE--AGAWMSVSNKVHDVAYTRD--PA-------------   64 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCce--EEEEEeCCCCceeEEEecC--CC-------------
Confidence            468999999999999999999999999999876543222221  11223332  233443321  00             


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEecCCeEEEEeec
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~gg~~~~fve~  178 (389)
                                    ....++.||||+|+|   +++++++++++|++++..|..... ...+..+++|+|..++|+..
T Consensus        65 --------------~~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          65 --------------GARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             --------------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence                          012268899999985   558889999999998777654221 22346788999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.17  E-value=4.4e-10  Score=98.41  Aligned_cols=119  Identities=14%  Similarity=0.012  Sum_probs=78.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC-CCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS-TGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~-~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      +|+||.|+|+|++++++||++.|||++......+ .+.  ....+++.++..    ... ..                  
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~--~~~~~l~~~~~~----~~~-~~------------------   55 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGN--PVAAFLRLDRGE----EYV-DH------------------   55 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCC--cEEEEEecCCCC----Ccc-cc------------------
Confidence            4899999999999999999999999987543221 111  112333322100    000 00                  


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHH---HHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAF---NTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~---~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                       .... .....+.|+.||||+|+|++++.   ++|+++|+++...|.... +...+..+++|+|..++|..
T Consensus        56 -~~~~-l~~~~~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          56 -HTLA-LAQGPESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             -hHHH-HhcCCCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence             0111 11223468999999999999987   999999999876654321 23346788999999998875

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.17  E-value=9.9e-10  Score=96.80  Aligned_cols=114  Identities=16%  Similarity=0.031  Sum_probs=82.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +++||.|+|+|++++.+||++.|||++..+..   +    ...++..|   +..|.|..+.....               
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~----~~~~~~~~~~~~~~l~l~~~~~~~~---------------   58 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D----RVRLEEGGGGPGAVVDVLEEPDQPR---------------   58 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C----EEEEEecCCCCCCEEEEEeCCCCCC---------------
Confidence            58999999999999999999999999886542   1    12333333   56777766421110               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                          .     .....++.||||.|+|   +++++++++++|+++ .+|... +......+++|+|..++|+..
T Consensus        59 ----~-----~~~~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~-~~~~~~-~~~~s~yf~DPdG~~iEl~~~  120 (157)
T cd08347          59 ----G-----RPGAGTVHHVAFRVPDDEELEAWKERLEALGLPV-SGIVDR-FYFKSLYFREPGGILFEIATD  120 (157)
T ss_pred             ----C-----cccCCceEEEEEECCCHHHHHHHHHHHHHCCCCc-cccccc-ccEEEEEEECCCCcEEEEEEC
Confidence                0     0012378999999998   999999999999974 444432 234567789999999999873

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.17  E-value=5.4e-10  Score=93.05  Aligned_cols=117  Identities=12%  Similarity=0.053  Sum_probs=79.4

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      +++.|+.++|+|++++++||++.|||++....+    .    ...+ .++..|.+..........               
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~----~~~~-~~~~~l~~~~~~~~~~~~---------------   56 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----E----NVTF-EGGFALQEGYSWLEGISK---------------   56 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----c----eEEE-eccceeccchhhhccCCc---------------
Confidence            468999999999999999999999999864322    1    1122 233333221100000000               


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCC-cccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGA-KPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga-~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       ...     ..+.+-.+++|.|+|+++++++++++|+ +++.+|...+.+.+...+++|+|+.+++.+
T Consensus        57 -~~~-----~~~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~  118 (120)
T cd09011          57 -ADI-----IEKSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGE  118 (120)
T ss_pred             -ccc-----cccCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEec
Confidence             000     0123456899999999999999999986 677888776556678889999999998865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.16  E-value=7.5e-10  Score=95.91  Aligned_cols=120  Identities=15%  Similarity=0.163  Sum_probs=76.9

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCc-eEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL-NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~-~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +.+.+|+|+++.|.|++++++||+++|||++......++     .+. ...++.+.+....+.+...             
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~-----~~~~~~~~l~~~~~~h~~~~~~~-------------   63 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPD-----GGTRVGSFLSCSNKPHDIAFVGG-------------   63 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCC-----CCeEEEEEEecCCCcceEEEecC-------------
Confidence            457899999999999999999999999999765432110     111 1223333222222222111             


Q ss_pred             HhhcCCCCcceEEEEeCCHHH---HHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          283 LEHNEGAGVQHLALVSEDIFR---TLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~---a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                          .+.|++|+||.|+|+.+   +.++|+++    |+++...| ..        -+       +   ....-+|=.|.+
T Consensus        64 ----~~~~~~Hiaf~v~d~~~l~~~~~~l~~~----Gv~i~~~p-~~--------~~-------~---~~~~~~yf~DPd  116 (143)
T cd07243          64 ----PDGKLHHFSFFLESWEDVLKAGDIISMN----DVSIDIGP-TR--------HG-------I---TRGQTIYFFDPS  116 (143)
T ss_pred             ----CCCCceEEEEEcCCHHHHHHHHHHHHHc----CCceEECC-cC--------CC-------C---CCceEEEEECCC
Confidence                23579999999999877   67899999    99877666 11        11       0   001123556888


Q ss_pred             ceEEEEecc
Q 016432          360 GTLLQIFTK  368 (389)
Q Consensus       360 g~llqift~  368 (389)
                      |..+.+|+.
T Consensus       117 G~~iEl~~~  125 (143)
T cd07243         117 GNRNETFAG  125 (143)
T ss_pred             CCEEEEecC
Confidence            888888764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK10291 glyoxalase I; Provisional

Probab=99.15  E-value=1.5e-09  Score=91.80  Aligned_cols=114  Identities=17%  Similarity=0.149  Sum_probs=78.5

Q ss_pred             EEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC----EEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           38 FWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD----LRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        38 ~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~----~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      |.|+|++++++||++.|||+++.....+...  .....+..++    ..+.+.... +.                     
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~-~~---------------------   57 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYK--YSLAFVGYGPETEEAVIELTYNW-GV---------------------   57 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCc--EEEEEEccCCCCCcceEEeeecC-CC---------------------
Confidence            7899999999999999999987654322221  2233343332    223433211 00                     


Q ss_pred             HHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEecCCeEEEEeec
Q 016432          114 CRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~gg~~~~fve~  178 (389)
                       ..+  ..+.+..|+||+|+|+++++++++++|+++..+|....+ ...++.+++|+|..++|++.
T Consensus        58 -~~~--~~g~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         58 -DKY--ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             -CCC--cCCCCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence             000  135578999999999999999999999998876644333 34567889999999999984

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.15  E-value=6.8e-10  Score=92.15  Aligned_cols=119  Identities=16%  Similarity=0.027  Sum_probs=79.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-c---CCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-S---GDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-~---g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +|+||.|.|+|++++++||++.|||++........+.... ...+. .   ++..+.|.+......              
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~~--------------   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPDAGP--------------   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceE-EEEEecCCCCCCCEEEEEecCCCCC--------------
Confidence            5799999999999999999999999988765422221111 12222 2   445666654321110              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                           .    ......++.|+||.|+   |+++++++++++|+++..++..  .......+++|+|..++|+
T Consensus        66 -----~----~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          66 -----K----GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH--FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             -----C----CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee--cceEEEEEECCCCCEEEeC
Confidence                 0    0012236889999998   5799999999999988654432  3445667788888887764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.15  E-value=5.7e-10  Score=95.00  Aligned_cols=112  Identities=8%  Similarity=-0.003  Sum_probs=80.1

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      |+||.|+|+|++++++||++.|||++.....     .   ...+..++..+.+.......                    
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~-----~---~~~~~~~~~~l~l~~~~~~~--------------------   52 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE-----K---TAYFTIGGTWLALNEEPDIP--------------------   52 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC-----c---cceEeeCceEEEEEccCCCC--------------------
Confidence            6899999999999999999999999875321     1   12345577777776531100                    


Q ss_pred             HHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          113 ACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       .    .....|+.||||.|+  |++++++++.++|+++..+|.......+...+++|+|..+++..
T Consensus        53 -~----~~~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~  114 (131)
T cd08363          53 -R----NEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHT  114 (131)
T ss_pred             -c----CCcCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEec
Confidence             0    011237889999998  49999999999999986555432223455677888888888876

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PRK06724 hypothetical protein; Provisional

Probab=99.15  E-value=8.9e-10  Score=93.78  Aligned_cols=109  Identities=13%  Similarity=0.178  Sum_probs=78.2

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhc---CCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGL---GMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~l---GF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      +.+++||.|.|+|++++++||.+.|   ||+....            ..+..|+..+.|..+...               
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~------------~~~~~g~~~l~l~~~~~~---------------   57 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE------------VAYSTGESEIYFKEVDEE---------------   57 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee------------EeeeCCCeeEEEecCCcc---------------
Confidence            5679999999999999999999965   6665421            112345555555432100               


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeecc---CceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILD---NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~---~~~~~~~v~~~gg~~~~fve  177 (389)
                                 + ....|..|+||.|   +|+|+.++++.++|++++.+|....   .+.....+++|+|..++++.
T Consensus        58 -----------~-~~~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~  122 (128)
T PRK06724         58 -----------I-VRTLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAY  122 (128)
T ss_pred             -----------c-cCCCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEe
Confidence                       0 0133788999998   7899999999999999887775432   23456678899999998876

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.13  E-value=9.8e-10  Score=97.63  Aligned_cols=124  Identities=15%  Similarity=0.211  Sum_probs=82.6

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      +.+++|+|+++.|+|++++.+||+++|||++......+.     ......++.......++.+.....            
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~------------   64 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDN-----GKEAGAWMSVSNKVHDVAYTRDPA------------   64 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCC-----CceEEEEEeCCCCceeEEEecCCC------------
Confidence            468999999999999999999999999999865432211     111223344333344444422210            


Q ss_pred             hhcCCCCcceEEEEeCCH---HHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCc
Q 016432          284 EHNEGAGVQHLALVSEDI---FRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQG  360 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vdDI---~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g  360 (389)
                        ....+++||||.|+|+   ++.+++|+++    |++++..| ...        +.          ...-.+|=.|.+|
T Consensus        65 --~~~~~~~hiaf~v~~~~~l~~~~~~l~~~----Gv~i~~~p-~~~--------~~----------~~~~~~y~~DPdG  119 (166)
T cd09014          65 --GARGRLHHLAYALDTREDVLRAADIFLEN----GIFIEAGP-GKH--------GI----------QQTFFLYVYEPGG  119 (166)
T ss_pred             --CCCCCceEEEEECCCHHHHHHHHHHHHHc----CCccccCC-ccc--------CC----------CCceEEEEECCCC
Confidence              0124699999999865   5788999999    99987666 321        10          0111356678999


Q ss_pred             eEEEEeccc
Q 016432          361 TLLQIFTKP  369 (389)
Q Consensus       361 ~llqift~~  369 (389)
                      +++++++.+
T Consensus       120 ~~iEl~~~~  128 (166)
T cd09014         120 NRVELFGGG  128 (166)
T ss_pred             CEEEEEEcC
Confidence            999999983

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.12  E-value=1.8e-09  Score=90.45  Aligned_cols=111  Identities=14%  Similarity=0.100  Sum_probs=80.2

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      .++++||.|.|+|++++++||++.|||++....+    .  . ..+.-.++..+.+..+  +                  
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~-~~~~~~~~~~l~~~~~--~------------------   54 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG----P--F-AVVKLDNGVSLDFAQP--D------------------   54 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----C--E-EEEEcCCCcEEEEecC--C------------------
Confidence            3679999999999999999999999999876321    1  1 1111123455555432  0                  


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeec-------cCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVIL-------DNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~-------~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                 ...+..|+||.|+  |+++++++++++|+++..+|...       ....+...+++|+|..++|+.+
T Consensus        55 -----------~~~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          55 -----------GEIPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             -----------CCCCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence                       0114568999887  69999999999999987776542       2345678888999999999874

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.12  E-value=1.5e-09  Score=90.53  Aligned_cols=109  Identities=16%  Similarity=0.093  Sum_probs=77.2

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CC---EEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GD---LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~---~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+.+|+||.|.|+|++++.+||++.|||++..+.+   +     ...++. ++   ..+.+...               
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~---~-----~~~l~~~~~~~~~~~~l~~~---------------   58 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG---Q-----SVYLRAWGDYEHHSLKLTES---------------   58 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC---C-----eEEEEeccCCCccEEEEeeC---------------
Confidence            568999999999999999999999999999876532   1     122332 21   23333321               


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                       -..|+.|+||.|+   |+++++++++++|+++...+... +......+++|+|..+++.-
T Consensus        59 -----------------~~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  117 (121)
T cd09013          59 -----------------PEAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDP-GHGKAYRFRSPDGHPMELYW  117 (121)
T ss_pred             -----------------CCCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCC-CCcceEEEECCCCCEEEEEE
Confidence                             1237899999997   68999999999999864333221 22335578899999888764

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.12  E-value=2.6e-09  Score=90.56  Aligned_cols=110  Identities=18%  Similarity=0.157  Sum_probs=79.3

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +||.|.|+|++++++||++.|||++....+.+ +.  ...+.++.++  ..+.+...                       
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~~~~-----------------------   54 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GV--DAAAFLRCDEDHHDLALFPG-----------------------   54 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-Cc--eeEEEEEcCCCcceEEEEcC-----------------------
Confidence            59999999999999999999999987654422 21  1223334333  33443321                       


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                              .+..++.|++|.|+|++   +++++++++|++++.+|.... +......+++|+|..++|+.
T Consensus        55 --------~~~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~  116 (131)
T cd08343          55 --------PERPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSA  116 (131)
T ss_pred             --------CCCCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEc
Confidence                    01347899999999875   789999999999887765422 23456789999999999987

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.11  E-value=8.8e-10  Score=89.15  Aligned_cols=112  Identities=16%  Similarity=0.073  Sum_probs=74.7

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      |+||.+.|+|++++++||++.|||+...+.....+     ...+..++ ..+.|........                  
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~i~l~~~~~~~~------------------   57 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFP-----GAWLYAGDGPQLHLIEEDPPDA------------------   57 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCC-----ceEEEeCCCcEEEEEecCCCcc------------------
Confidence            68999999999999999999999998754321111     12233333 2555554321110                  


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEE
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLR  174 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~  174 (389)
                       .     ...+.+..+++|+|+|+++++++++++|++++.+|... .......+.+|+|..++
T Consensus        58 -~-----~~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~DP~G~~iE  113 (114)
T cd07245          58 -L-----PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPG-DGVRQLFVRDPDGNRIE  113 (114)
T ss_pred             -c-----cCCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCCC-CCccEEEEECCCCCEEe
Confidence             0     11234678999999999999999999999988776542 23334556677776654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.11  E-value=1.3e-09  Score=92.99  Aligned_cols=116  Identities=24%  Similarity=0.242  Sum_probs=80.0

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC--CcceEEEeccCCCCCCCCchHHHHHh
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN--DEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~--~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+|+|+++.|.|++++.+||+++|||+......         + ...++...  .+...+.+....   .          
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~---------~-~~~~~~~~~~~~~~~i~l~~~~---~----------   58 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK---------G-RGAFLRAAGGGDHHNLFLIKTP---A----------   58 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec---------C-cEEEEECCCCCCCcEEEEecCC---C----------
Confidence            579999999999999999999999999865422         1 12234433  233455554332   0          


Q ss_pred             hcCCCCcceEEEEeCCHHHHH---HHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSEDIFRTL---REMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~---~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                        ...|++||||.|+|+.+..   ++|+++    |++....| ...+      .+            ..-.+|=+|.+|.
T Consensus        59 --~~~g~~hiaf~v~d~~~~~~~~~~l~~~----G~~~~~~~-~~~~------~~------------~~~~~y~~DP~G~  113 (134)
T cd08360          59 --PMAGFHHAAFEVGDIDEVMLGGNHMLRA----GYQTGWGP-GRHR------IG------------SNYFWYFRDPWGG  113 (134)
T ss_pred             --CCCcceEEEEEeCCHHHHHHHHHHHHHc----CCccccCC-CCcC------CC------------ccEEEEEECCCCC
Confidence              1368999999999998776   599999    99877655 2211      11            0112466788899


Q ss_pred             EEEEecccc
Q 016432          362 LLQIFTKPV  370 (389)
Q Consensus       362 llqift~~~  370 (389)
                      ++++++...
T Consensus       114 ~iEl~~~~~  122 (134)
T cd08360         114 EVEYGADMD  122 (134)
T ss_pred             EEEEEcccc
Confidence            999998654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.11  E-value=2.6e-09  Score=91.09  Aligned_cols=110  Identities=15%  Similarity=0.119  Sum_probs=78.9

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCCCccccccCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+++||.|.|+|++++.+||++.|||++.....  .     ....++.+    ...+.+....  .              
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~-----~~~~~~~~~~~~~~~i~l~~~~--~--------------   58 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G-----RGAFLRAAGGGDHHNLFLIKTP--A--------------   58 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C-----cEEEEECCCCCCCcEEEEecCC--C--------------
Confidence            579999999999999999999999999876532  1     12234432    1345554321  0              


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHH---HHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAF---NTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~---~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                    ...|+.||||.|+|+++..   +++.++|+++...|...+ +......+++|+|..++|..
T Consensus        59 --------------~~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          59 --------------PMAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             --------------CCCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence                          1248999999999988777   599999999876554322 23345788999999998875

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.10  E-value=2.1e-09  Score=88.75  Aligned_cols=108  Identities=18%  Similarity=0.159  Sum_probs=76.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      |.+++||.+.|+|++++.+||.+ |||++..+.+   +    .++ ++. |+..+.+.-...                  
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---~----~~~-~~~~~~~~~~~~~~~~------------------   53 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---D----ELY-YRGYGTDPFVYVARKG------------------   53 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---C----eEE-EecCCCccEEEEcccC------------------
Confidence            57899999999999999999998 9999876532   1    122 343 332222221100                  


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  ...++.|+||.|+|.++..+.+.+.|+..+..+. .++......+++|+|..++|+-
T Consensus        54 ------------~~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          54 ------------EKARFVGAAFEAASRADLEKAAALPGASVIDDLE-APGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             ------------CcCcccEEEEEECCHHHHHHHHHcCCCeeecCCC-CCCCceEEEEECCCCCEEEEEe
Confidence                        1236778999999999999999999998765543 2233456788899999998864

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.10  E-value=1.8e-09  Score=90.07  Aligned_cols=110  Identities=18%  Similarity=0.149  Sum_probs=77.5

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--C-CEEEEEEccCCCCCccccccCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--G-DLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g-~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      +++++||.|.|+|++++.+||++.|||++.....  .+.    .++...  + ...+.+...                  
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~----~~~~~~~~~~~~~~~l~~~------------------   57 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QGR----VYLKAWDEFDHHSIVLREA------------------   57 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cce----EEEEccCCCcccEEEeccC------------------
Confidence            6889999999999999999999999999875431  111    222111  1 223333210                  


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~fve  177 (389)
                                    ...++.|+||.|+   |++++++++.++|+++...|... .+......+++|+|..++|..
T Consensus        58 --------------~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~  118 (122)
T cd07265          58 --------------DTAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYA  118 (122)
T ss_pred             --------------CCCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEE
Confidence                          1236789999997   89999999999999987655322 222346778899999998865

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.09  E-value=9.3e-10  Score=96.47  Aligned_cols=123  Identities=18%  Similarity=0.160  Sum_probs=80.0

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      -.+|+|++++|+|++++.+||+++|||++.........  +..+....++...+....+.+....               
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~i~~~~~~---------------   69 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLP--PGPTARVTFLHCNGRHHSLALAEGP---------------   69 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCC--CCCcceEEEEEeCCCCCCEEEEcCC---------------
Confidence            46799999999999999999999999998654321100  0112233344443323334332221               


Q ss_pred             cCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       .+.|++||||.|+|+.   +++++|+++    |+++...| ..        .+.          ...-.+|=+|++|.+
T Consensus        70 -~~~g~~Hiaf~V~d~~~l~~~~~~L~~~----G~~v~~~~-~~--------~~~----------~~~~~~y~~DPdG~~  125 (154)
T cd07237          70 -GPKRIHHLMLEVTSLDDVGRAYDRVRAR----GIPIAMTL-GR--------HTN----------DRMLSFYVRTPSGFA  125 (154)
T ss_pred             -CCceeEEEEEEcCCHHHHHHHHHHHHHc----CCceeccC-Cc--------cCC----------CCcEEEEEECCCCcE
Confidence             2367999999998765   689999999    99998765 21        000          001124567889999


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +++++..
T Consensus       126 iEl~~~~  132 (154)
T cd07237         126 IEYGWGG  132 (154)
T ss_pred             EEeccCc
Confidence            9998774

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.09  E-value=1.9e-09  Score=88.28  Aligned_cols=108  Identities=13%  Similarity=0.054  Sum_probs=76.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      ||.+.|+|++++++||++.|||++..+.+  .      ...++.++..+.+.......                      
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~------~~~~~~~~~~l~~~~~~~~~----------------------   50 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K------EAYFELAGLWICLMEEDSLQ----------------------   50 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c------eeEEEecCeEEEeccCCCcC----------------------
Confidence            89999999999999999999999875532  1      12344566666665421100                      


Q ss_pred             HHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          115 RSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       115 ~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                           ..+.+..|+||.|  +|+++++++++++|+++...+...........+++|+|..+++..
T Consensus        51 -----~~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          51 -----GPERTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             -----CCCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence                 0123678999999  589999999999999976543322223456678899999988864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.09  E-value=2.5e-09  Score=85.41  Aligned_cols=111  Identities=20%  Similarity=0.187  Sum_probs=82.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      ||.+.|+|++++++||++.|||+.......  +  ......++.++..|.|..+.....                   . 
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~--~~~~~~~~~~~~~i~l~~~~~~~~-------------------~-   56 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--G--GAEFAVLGLGGTRLELFEGDEPAP-------------------A-   56 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--C--CEEEEEEecCCceEEEecCCCCCC-------------------c-
Confidence            899999999999999999999998877531  1  124566777788888887532210                   0 


Q ss_pred             HHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEE
Q 016432          115 RSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLR  174 (389)
Q Consensus       115 ~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~  174 (389)
                           .++.++.|+||.|+|++++++++.++|+.+..+|...........+.+|+|..+.
T Consensus        57 -----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~  111 (112)
T cd06587          57 -----PSGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIE  111 (112)
T ss_pred             -----ccCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEe
Confidence                 2455789999999999999999999999988777522233455566666666543

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.08  E-value=4.2e-09  Score=93.03  Aligned_cols=113  Identities=14%  Similarity=0.106  Sum_probs=75.7

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-C-EEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-D-LRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++|+||.|.|+|++++++||+++|||++......+.+.. . ...+..+ . ..+.+..                     
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~-~-~~~l~~~~~~~~i~l~~---------------------   58 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTT-W-AAWLHRKGGVHDTALTG---------------------   58 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcE-E-EEEEecCCCcceEEEec---------------------
Confidence            679999999999999999999999999875432222221 1 1222222 1 1222221                     


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcc-c-CCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKP-S-SPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~-i-~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                 ..+.++.|+||.|+|   +++++++|+++|+.. + ..|.... .......+++|+|..++++.
T Consensus        59 -----------~~~~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~  122 (161)
T cd07256          59 -----------GNGPRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYT  122 (161)
T ss_pred             -----------CCCCceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEee
Confidence                       124478999999985   888999999999973 2 2342211 12345778899999999886

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.08  E-value=4.9e-09  Score=89.11  Aligned_cols=112  Identities=14%  Similarity=0.204  Sum_probs=75.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC----------ceeEEEEE-E--EcCCEEEEEEccCCCCCccccc
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG----------NTVHASYL-L--RSGDLRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g----------~r~~~~~~-~--~~g~~~i~l~~p~~~~~~~~~~   98 (389)
                      ++.|+.+.|+|++++++||+++|||++..+...++|          ..+..+.+ +  ..++..++|+......      
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~------   75 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIG------   75 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCC------
Confidence            589999999999999999999999998776544432          11111112 1  1234566666421111      


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432           99 AGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                    .   +  ..|.+  +++|.|+|. .+.++++++|+++...|..      +.+|++|+|..++|+|
T Consensus        76 --------------~---~--~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~------~~fi~DPDG~~ie~~~  126 (127)
T cd08358          76 --------------D---Y--ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG------VYEVKAPGGYKFYLID  126 (127)
T ss_pred             --------------C---C--CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC------EEEEECCCCCEEEEec
Confidence                          0   0  12334  677777777 4559999999987765541      7899999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.07  E-value=2.5e-09  Score=88.50  Aligned_cols=110  Identities=16%  Similarity=0.132  Sum_probs=76.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +.+|+||.|+|+|++++.+||++.|||++....+   +     ...++.++ ...++.... .                 
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~-~-----------------   54 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD---G-----IVYLRATGSEHHILRLRR-S-----------------   54 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC---C-----EEEEECCCCccEEEEecc-C-----------------
Confidence            4689999999999999999999999999875532   1     22334332 222221110 0                 


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCee--ccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVI--LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~--~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  ..+++.|++|.|   +|+++++++++++|+++..+|..  .+.......+++|+|..++++.
T Consensus        55 ------------~~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  116 (120)
T cd08362          55 ------------DRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSA  116 (120)
T ss_pred             ------------CCCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEe
Confidence                        012567899999   57999999999999998776532  2223445678889999888875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.07  E-value=7.8e-10  Score=92.06  Aligned_cols=118  Identities=15%  Similarity=0.119  Sum_probs=77.9

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      ++||.+.|+|++++++||. .|||+.....+.   ..  ...+...++..|.|........ ..          +     
T Consensus         1 ~~~i~l~V~D~~~a~~FY~-~LGf~~~~~~~~---~~--~~~~~~~~~~~l~l~~~~~~~~-~~----------~-----   58 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYR-RLGFDFPEEADD---EP--HVEAVLPGGVRLAWDTVESIRS-FT----------P-----   58 (122)
T ss_pred             CceEEEEeccHHHHHHHHH-HhCceecCCcCC---CC--cEEEEeCCCEEEEEEcccceee-ec----------C-----
Confidence            5899999999999999996 599997643221   01  1222223467777654311100 00          0     


Q ss_pred             HHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          113 ACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                      ..    ...+.+..+++|.|.   |+++++++++++|++++.+|...+.+.+.+.+++|+|..++|+
T Consensus        59 ~~----~~~~~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          59 GW----TPTGGHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CC----CCCCCCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            00    001224457888765   8999999999999998888876555566788999999988775

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.06  E-value=3.9e-08  Score=91.93  Aligned_cols=216  Identities=13%  Similarity=0.093  Sum_probs=132.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEE-EEEEccCCCCCccccccCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLR-FVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~-i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+.-|.|.|+|++.+..||++++|+++..+.+        ....+..|+.. +.|.+..... +          .    
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~--------~~v~L~vgg~~LL~L~q~~~a~-~----------~----   65 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD--------GSVTLGVGGTPLLTLEQFPDAR-R----------P----   65 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC--------ceEEEeeCCEEEEEEEeCCCCC-C----------C----
Confidence            679999999999999999999999999997643        13344555543 4444311110 0          0    


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccC-CCeeccCceEEEEEEecCCeEEEEeecCCCCCCC
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSS-PPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHL  185 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~-~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~~~g  185 (389)
                               ..+..|..|+||.++   |..+.+.+|...|..+.. .+..   --....+.+|.|.-+++.-.++. ...
T Consensus        66 ---------~~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga~DH~---vSEAlYl~DPEGNGIEiYaDrp~-~~W  132 (265)
T COG2514          66 ---------PPRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGASDHL---VSEALYLEDPEGNGIEIYADRPR-STW  132 (265)
T ss_pred             ---------CccccceeeeeeecCCHHHHHHHHHHHHhcCCcccccCcch---hheeeeecCCCCCeEEEEecCCh-HHh
Confidence                     013459999999999   577788889999987641 1221   11244567899998887652111 001


Q ss_pred             CCCCC-------------CccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceE
Q 016432          186 DFLPG-------------FEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNS  252 (389)
Q Consensus       186 ~~lp~-------------f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s  252 (389)
                      .|..+             +........-..-..-+.|-||.+.|.+++++.+||+++|||+...+..           .+
T Consensus       133 ~~~~~~v~m~t~~ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~-----------~A  201 (265)
T COG2514         133 DWQNDQVKMDTEPLDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP-----------SA  201 (265)
T ss_pred             cccCCeeeecccccCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC-----------cc
Confidence            12111             1000000000001135789999999999999999999999999876521           23


Q ss_pred             EEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCC
Q 016432          253 VVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSED  300 (389)
Q Consensus       253 ~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdD  300 (389)
                      .++...+=...|..|.-.....++       +...-.|+-.+.+.+++
T Consensus       202 ~F~a~G~YHHHia~N~W~s~~~~~-------~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         202 LFLASGDYHHHLAANTWNSRGARP-------RNANASGLAWLEIHTPD  242 (265)
T ss_pred             eEEecCCcceeEEEeccccCCCCC-------CCCCCCCcceEEEEcCC
Confidence            444454446667776553210000       01123578888888876

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.06  E-value=2.3e-09  Score=88.65  Aligned_cols=101  Identities=18%  Similarity=0.227  Sum_probs=66.1

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +++|+|+++.|+|++++++||+++|||+........+     .+.....+.. ++...++|.....  ....     ...
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~-~~~~~i~l~~~~~--~~~~-----~~~   67 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPE-----RGSYKLDLLL-NGGYQLELFSFPN--PPER-----PSY   67 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCC-----CCcEEEEEec-CCCcEEEEEEcCC--CCCC-----CCC
Confidence            3679999999999999999999999999865432111     1111122222 2223344432221  0000     001


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.|++|+||.|+|++++.++|+++    |+++...|
T Consensus        68 ~~~~g~~h~~~~v~d~~~~~~~l~~~----G~~~~~~~  101 (125)
T cd08352          68 PEACGLRHLAFSVEDIEAAVKHLKAK----GVEVEPIR  101 (125)
T ss_pred             CcCCCceEEEEEeCCHHHHHHHHHHc----CCcccccc
Confidence            13468999999999999999999999    99988755

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.06  E-value=4.8e-09  Score=91.95  Aligned_cols=116  Identities=15%  Similarity=0.124  Sum_probs=79.5

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      -++|+||.|.|+|++++++||++.|||++.......  ++.. ....+++.++  ..+.+...                 
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~i~~~~~-----------------   68 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPT-ARVTFLHCNGRHHSLALAEG-----------------   68 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCc-ceEEEEEeCCCCCCEEEEcC-----------------
Confidence            478999999999999999999999999987643211  1111 1233333332  22333211                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                    ..+.++.||||.|+|++   +++++++++|+++..+|...+ +......+++|+|..++|..
T Consensus        69 --------------~~~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~  130 (154)
T cd07237          69 --------------PGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGW  130 (154)
T ss_pred             --------------CCCceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEecc
Confidence                          01347999999998754   689999999999877664322 23456678899999998875

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.05  E-value=2.5e-09  Score=93.02  Aligned_cols=127  Identities=17%  Similarity=0.284  Sum_probs=82.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      ..++|+|+.+.|.|++++..||+++|||+.....+..+     .+....++...+  ....+.+.....   ...     
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~-----   80 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPE-----MKFSLAFLGYGDETSAAVIELTHNWG---TEK-----   80 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCC-----CceEEEEecCCCCCCccEEEEeecCC---CCc-----
Confidence            46899999999999999999999999999865443211     112222332222  223344433221   000     


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                        ...+.|++|++|.|+||++++++|+++    |++++..| .. ..     -+            ...+.|=+|.+|+.
T Consensus        81 --~~~~~g~~hi~f~v~dld~~~~~l~~~----G~~~~~~~-~~-~~-----~~------------~~~~~~~~DPdG~~  135 (150)
T TIGR00068        81 --YDLGNGFGHIAIGVDDVYKACERVRAL----GGNVVREP-GP-VK-----GG------------TTVIAFVEDPDGYK  135 (150)
T ss_pred             --ccCCCceeEEEEecCCHHHHHHHHHHc----CCccccCC-cc-cC-----CC------------ceEEEEEECCCCCE
Confidence              113468999999999999999999999    99988766 21 00     00            01133447788888


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +++++..
T Consensus       136 iel~~~~  142 (150)
T TIGR00068       136 IELIQRK  142 (150)
T ss_pred             EEEEECC
Confidence            8887755

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.05  E-value=6.3e-09  Score=84.68  Aligned_cols=109  Identities=17%  Similarity=0.103  Sum_probs=80.2

Q ss_pred             EEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHHH
Q 016432           37 EFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRS  116 (389)
Q Consensus        37 ~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (389)
                      .|.|+|++++++||++.|||+.....+ .  .   ....++.++..+.|.....+..                   .   
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~-~--~---~~~~~~~~~~~~~l~~~~~~~~-------------------~---   54 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP-E--P---GYAFLSRGGAQLMLSEHDGDEP-------------------V---   54 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC-C--C---cEEEEEeCCEEEEEeccCCCCC-------------------C---
Confidence            689999999999999999999887643 1  1   1345566888888765422110                   0   


Q ss_pred             HHHhcCCceeEEEEEEcCHHHHHHHHHHCCCc-ccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          117 FAASHGLAARSIAVEVEDADVAFNTSVAHGAK-PSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       117 ~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~-~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                          ...+..+++|.|+|+++++++++++|++ +..+|.......+...+++|+|..+.|+|
T Consensus        55 ----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          55 ----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             ----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence                2235558999999999999999999998 55566554445566778899999888864

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.04  E-value=3.2e-09  Score=87.22  Aligned_cols=107  Identities=17%  Similarity=0.160  Sum_probs=79.5

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      ++++||.|.|+|++++++||++.|||++....+    .    ...++.+   ...+.+...                   
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~-------------------   53 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----G----SVYLRCSEDDHHSLVLTEG-------------------   53 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----C----eEEEecCCCCcEEEEEEeC-------------------
Confidence            479999999999999999999999999886532    1    2233433   334444321                   


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   ...++.|++|.|+   |+++++++++++|+++...|...++......+.+|+|..++++.
T Consensus        54 -------------~~~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  113 (117)
T cd07240          54 -------------DEPGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFV  113 (117)
T ss_pred             -------------CCCCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEE
Confidence                         1136789999997   68999999999999988777543344456678889999888875

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.04  E-value=4.6e-09  Score=87.73  Aligned_cols=107  Identities=15%  Similarity=0.074  Sum_probs=78.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +|+||.|.|+|++++.+||++.|||++....+  .      ...+..++..+.+...  +.                   
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~------~~~~~~~~~~~~l~~~--~~-------------------   51 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K------GAYLEAGDLWLCLSVD--AN-------------------   51 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C------ceEEecCCEEEEEecC--CC-------------------
Confidence            58999999999999999999999999876432  1      1224456655554321  11                   


Q ss_pred             HHHHHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       .      ....+..|+||.|  +|+++++++++++|++++.++...   .....+++|+|..++|..
T Consensus        52 -~------~~~~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~---~~~~~f~DPdG~~ie~~~  109 (121)
T cd07244          52 -V------GPAKDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE---GDSFYFLDPDGHKLELHV  109 (121)
T ss_pred             -C------CCCCCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC---ccEEEEECCCCCEEEEEe
Confidence             0      0123678999998  589999999999999987665432   246678899999998876

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.03  E-value=6.4e-09  Score=86.62  Aligned_cols=107  Identities=17%  Similarity=0.119  Sum_probs=77.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      ...|.|+|++++++||++ |||+...+...       ....++.++..+.|.......                      
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-------~~~~~~~~~~~l~l~~~~~~~----------------------   54 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-------GYMILRRGDLELHFFAHPDLD----------------------   54 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-------CEEEEEcCCEEEEEEecCcCC----------------------
Confidence            467899999999999998 99998765321       134456777777776421100                      


Q ss_pred             HHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcc-------cCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          115 RSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKP-------SSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       115 ~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~-------i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                            ......+++|.|+|+++++++++++|+++       +.+|...+.+.+...+++|+|..++|++
T Consensus        55 ------~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~  118 (120)
T cd08350          55 ------PATSPFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQ  118 (120)
T ss_pred             ------CCCCcceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeec
Confidence                  01123468999999999999999999974       3345544456678889999999998876

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.03  E-value=2.1e-09  Score=89.19  Aligned_cols=99  Identities=17%  Similarity=0.241  Sum_probs=67.7

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +|+|++++|.|++++++||+++|||+.......+     ..+..+.++... +...++|.+...  .....    . ..+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~l~~~~~--~~~~~----~-~~~   67 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNP-----RKGFESYFLSFD-DGARLELMTRPD--IAPSP----N-EGE   67 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCC-----CCCceEEEEecC-CCcEEEEEcCcc--cCCCc----c-cCC
Confidence            4789999999999999999999999975433221     134444445443 334566654321  11110    1 113


Q ss_pred             CCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..|++||||.|+   ||++.+++|+++    |++++..|
T Consensus        68 ~~g~~hi~f~v~~~~~v~~~~~~l~~~----g~~~~~~~  102 (125)
T cd07241          68 RTGWAHLAFSVGSKEAVDELTERLRAD----GYLIIGEP  102 (125)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHC----CCEEEeCc
Confidence            468999999995   589999999999    99998765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.02  E-value=7.2e-09  Score=89.87  Aligned_cols=108  Identities=17%  Similarity=0.124  Sum_probs=77.9

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      .+++||.|.|+|++++++||++.|||++....+  +     ....++.++  ..+.+...                    
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~-----~~~~l~~~~~~~~~~l~~~--------------------   55 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D-----QMAFLRCNSDHHSIAIARG--------------------   55 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C-----eEEEEECCCCcceEEEccC--------------------
Confidence            479999999999999999999999999865421  0     122334332  33443321                    


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHH---HHHHHCCCcccCCCee-ccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAF---NTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~---~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  ...++.|+||.|+|++++.   ++++++|+++..+|.. ..+...+..+++|+|..++|++
T Consensus        56 ------------~~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~  116 (144)
T cd07239          56 ------------PHPSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTS  116 (144)
T ss_pred             ------------CCCceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEecc
Confidence                        1237889999999988875   8999999998766532 2223345678999999999987

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.02  E-value=3.2e-09  Score=89.39  Aligned_cols=116  Identities=14%  Similarity=0.171  Sum_probs=79.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+++.|+|++++.+||+++|||++..+..         +  ..++..+.....+.+..+               
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~---------~--~~~l~~~~~~~~i~l~~~---------------   56 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA---------K--ATYFRSDARDHTLVYIEG---------------   56 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC---------C--eEEEEcCCccEEEEEEeC---------------
Confidence            57899999999999999999999999999864311         1  233444333444544322               


Q ss_pred             hcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                         .++.+|+||+|+|   +++++++|+++    |+++...| ..   ....+-+           .  ..++=+|.+|.
T Consensus        57 ---~~~~~~iaf~v~~~~dv~~~~~~l~~~----G~~~~~~~-~~---~~~~~~~-----------~--~~~~f~DPdG~  112 (124)
T cd08361          57 ---DPAEQASGFELRDDDALESAATELEQY----GHEVRRGT-AE---ECELRKV-----------K--AFIAFRDPSGN  112 (124)
T ss_pred             ---CCceEEEEEEECCHHHHHHHHHHHHHc----CCceEEcC-HH---HhhcCCc-----------c--eEEEEECcCCC
Confidence               1346899999986   99999999999    99987755 21   0000000           0  12355678888


Q ss_pred             EEEEecccc
Q 016432          362 LLQIFTKPV  370 (389)
Q Consensus       362 llqift~~~  370 (389)
                      .+.+|..|.
T Consensus       113 ~iE~~~~~~  121 (124)
T cd08361         113 SIELVVRPS  121 (124)
T ss_pred             EEEEEEeee
Confidence            888888775

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.02  E-value=5.2e-09  Score=88.99  Aligned_cols=123  Identities=15%  Similarity=0.143  Sum_probs=79.8

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|+|++++++||+++|||++.++......   ..+ ...+...  +...+.+..+..    .        
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~---~~~-~~~~~~~--~~~~i~l~~~~~----~--------   62 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTF---SLS-KEKFFLI--GGLWIAIMEGDS----L--------   62 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccc---ccc-ceeEEEc--CCeEEEEecCCC----C--------
Confidence            367899999999999999999999999987654221100   011 1111222  234555553321    0        


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                        ...+++||||.|+  |+++..++|+++    |+++..++  ....      +            ...-+|=+|++|.+
T Consensus        63 --~~~~~~Hiaf~v~~~~ld~~~~~l~~~----gv~~~~~~--~~~~------~------------~g~~~yf~DPdG~~  116 (131)
T cd08364          63 --QERTYNHIAFKISDSDVDEYTERIKAL----GVEMKPPR--PRVQ------G------------EGRSIYFYDFDNHL  116 (131)
T ss_pred             --CCCCceEEEEEcCHHHHHHHHHHHHHC----CCEEecCC--cccc------C------------CceEEEEECCCCCE
Confidence              1236899999998  799999999999    99876543  1110      0            00133557889999


Q ss_pred             EEEeccccC
Q 016432          363 LQIFTKPVG  371 (389)
Q Consensus       363 lqift~~~~  371 (389)
                      +++++..+-
T Consensus       117 iEl~~~~~~  125 (131)
T cd08364         117 FELHTGTLE  125 (131)
T ss_pred             EEEecCCHH
Confidence            999876653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.01  E-value=3.6e-09  Score=88.74  Aligned_cols=94  Identities=22%  Similarity=0.316  Sum_probs=68.6

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhh---CCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFT---GFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~l---Gf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      +|+||++.|.|++++.+||+++|   ||++.....        .+. .+...  .+...|.|..+..   ..+.   ...
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--------~~~-~~~~~--~~~~~i~l~~~~~---~~~~---~~~   63 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--------DGR-SWRAG--DGGTYLVLQQADG---ESAG---RHD   63 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--------cCc-eEEec--CCceEEEEEeccc---CCCc---ccc
Confidence            48999999999999999999999   999876532        121 12111  3456777766642   1111   122


Q ss_pred             hcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ..+.|++|+||.|+   ||++++++|+++    |+++...|
T Consensus        64 -~~~~g~~hia~~v~~~~d~~~~~~~l~~~----g~~~~~~~  100 (128)
T cd07242          64 -RRNPGLHHLAFRAPSREAVDELYARLAKR----GAEILYAP  100 (128)
T ss_pred             -cCCcCeeEEEEEcCCHHHHHHHHHHHHHc----CCeEecCC
Confidence             24678999999997   589999999999    99999877

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.01  E-value=4.7e-09  Score=88.32  Aligned_cols=108  Identities=14%  Similarity=0.119  Sum_probs=78.0

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+.+|.||.+.|+|++++.+||+++|||++..+.+   +     ...++.+  ...+.+....                 
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~---~-----~~~l~~~~~~~~i~l~~~~-----------------   57 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA---K-----ATYFRSDARDHTLVYIEGD-----------------   57 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC---C-----eEEEEcCCccEEEEEEeCC-----------------
Confidence            57899999999999999999999999999865421   1     1223433  2444544210                 


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeec---cCceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~---~~~~~~~~v~~~gg~~~~fve  177 (389)
                                      ++..++||+|+|   ++++++++.++|+++...|...   .+...+..+++|+|..++++.
T Consensus        58 ----------------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~  118 (124)
T cd08361          58 ----------------PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVV  118 (124)
T ss_pred             ----------------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEE
Confidence                            145679999985   9999999999999876544321   122445678899999998876

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.01  E-value=7e-09  Score=91.57  Aligned_cols=119  Identities=23%  Similarity=0.315  Sum_probs=75.1

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCc-eEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL-NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~-~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      .+|+|+++.|+|++++++||+++|||++......+      .+. ...++....+...+.+...                
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~------~~~~~~~~l~~~~~~~~i~l~~~----------------   59 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDD------DGTTWAAWLHRKGGVHDTALTGG----------------   59 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccC------CCcEEEEEEecCCCcceEEEecC----------------
Confidence            57999999999999999999999999986433211      121 1222332222233333211                


Q ss_pred             cCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCcee-cCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          286 NEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEF-MPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~-l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                       .++|++|+||.|+|   +.+++++|+++    |+.. +..+|..        -+          ......+|=.|.+|.
T Consensus        60 -~~~~~~Hiaf~v~~~~~v~~~~~~L~~~----G~~~~~~~~p~~--------~g----------~~~~~~~y~~DPdG~  116 (161)
T cd07256          60 -NGPRLHHVAFWVPEPHNIIRTCDLLAAA----GYSDRIERGPGR--------HG----------ISNAFFLYLRDPDGH  116 (161)
T ss_pred             -CCCceeEEEEEcCCHHHHHHHHHHHHHc----CCCcccccCCCc--------cC----------CCCceEEEEECCCCC
Confidence             34679999999986   88899999999    9863 2111010        11          001112455678888


Q ss_pred             EEEEecccc
Q 016432          362 LLQIFTKPV  370 (389)
Q Consensus       362 llqift~~~  370 (389)
                      ++.+++.+.
T Consensus       117 ~iEl~~~~~  125 (161)
T cd07256         117 RIEIYTGDY  125 (161)
T ss_pred             eEEEeecCc
Confidence            888887765

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.01  E-value=1.7e-08  Score=84.05  Aligned_cols=113  Identities=12%  Similarity=0.097  Sum_probs=79.3

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++|+||.|.|+|++++++||++.|||++....+    .    .+.+..++  ..|.+.......                
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~----~~~l~~~~~~~~l~l~~~~~~~----------------   56 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----S----TAVLGTGGKRPLLVLEEDPDAP----------------   56 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----C----EEEEecCCCeEEEEEEeCCCCC----------------
Confidence            579999999999999999999999999986632    1    22344443  556665431100                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                              ....+..+..|++|.|+   |++++++++.++|+++.. |... .......+++|+|..++|..
T Consensus        57 --------~~~~~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~-~~~~-~~~~~~~~~DPdG~~iEi~~  118 (125)
T cd07255          57 --------PAPPGATGLYHFAILLPSRADLAAALRRLIELGIPLVG-ASDH-LVSEALYLSDPEGNGIEIYA  118 (125)
T ss_pred             --------cccCCCCcEEEEEEECCCHHHHHHHHHHHHHcCCceec-cccc-cceeEEEEECCCCCEEEEEE
Confidence                    00112347889999997   599999999999998643 3221 12345678899999998876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.01  E-value=6.1e-09  Score=84.42  Aligned_cols=104  Identities=15%  Similarity=0.020  Sum_probs=73.5

Q ss_pred             EEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC----EEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           38 FWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD----LRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        38 ~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~----~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      |.|+|++++++||.+.|||++....+   +.     ..+..+.    -...+.....+.                     
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~---------------------   51 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP---DY-----VDFSLGFRFHDGVIEFLQFPDPP---------------------   51 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET---SE-----EEEEETEEEEEEEEEEEEEESSS---------------------
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC---Ce-----EEEEeccchhhhhHHHccCCccc---------------------
Confidence            68999999999999999999998543   11     1122221    112222211111                     


Q ss_pred             HHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          114 CRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                            ....+..+++|.|+|+++++++++++|++++.+|.....+.....+.+|+|..++|+
T Consensus        52 ------~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   52 ------GPPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             ------SSSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             ------cCCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence                  023367899999999999999999999999888887666677888899999988875

...

>PLN02300 lactoylglutathione lyase

Probab=98.99  E-value=8.7e-09  Score=99.49  Aligned_cols=139  Identities=17%  Similarity=0.261  Sum_probs=89.3

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC--CcceEEEeccCCCCCCCCchHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN--DEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~--~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      ..+.+|+|+++.|.|++++++||+++|||+.......++     .+....++...  ...+.+++.....  ...     
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~--~~~-----   87 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSNFVVELTYNYG--VDK-----   87 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----CcEEEEEEccCCCCCceEEEEeccCC--CCc-----
Confidence            358999999999999999999999999999876533211     12222333322  2334455543210  000     


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                         ...+.|++|+||.|+|+++++++|++.    |++++..| .. ..     -+            ...+.+=.|.+|+
T Consensus        88 ---~~~~~g~~hia~~v~dvd~~~~~l~~~----G~~i~~~~-~~-~~-----~g------------~~~~~~~~DPdG~  141 (286)
T PLN02300         88 ---YDIGTGFGHFGIAVEDVAKTVELVKAK----GGKVTREP-GP-VK-----GG------------KSVIAFVKDPDGY  141 (286)
T ss_pred             ---cccCCCccEEEEEeCCHHHHHHHHHHC----CCeeecCC-cc-cC-----CC------------ceEEEEEECCCCC
Confidence               113568999999999999999999999    99988776 32 10     00            0113344678888


Q ss_pred             EEEEeccccCCCCceEEEE
Q 016432          362 LLQIFTKPVGDRYVHLLML  380 (389)
Q Consensus       362 llqift~~~~~~~~~FfE~  380 (389)
                      .+.++.++....+.-.++|
T Consensus       142 ~iEl~~~~~~~~~~~~~~l  160 (286)
T PLN02300        142 KFELIQRGPTPEPLCQVML  160 (286)
T ss_pred             EEEEEeCCCCCCcceeEEE
Confidence            8888887654433333443

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.99  E-value=1e-08  Score=93.56  Aligned_cols=214  Identities=16%  Similarity=0.204  Sum_probs=132.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC----------cee-EEEEEEEcCCEEEEEEccCCCCCcccccc
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG----------NTV-HASYLLRSGDLRFVFTAPYSPSISDAADA   99 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g----------~r~-~~~~~~~~g~~~i~l~~p~~~~~~~~~~~   99 (389)
                      .+.-|+.|-|.|.++++.||+++|||++...++.++|          .+| +...-+..-+.+|++--..+         
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYN---------   86 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYN---------   86 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEec---------
Confidence            5678999999999999999999999999876665552          222 22222222344444322111         


Q ss_pred             CCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecC
Q 016432          100 GNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                               |   .+++|  .-|.+..+|++.++|+-...+...+.|.+        ...-.++.+.+|+|...+++++.
T Consensus        87 ---------Y---gV~~Y--elGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   87 ---------Y---GVSKY--ELGNDFGGITIASDDVFSKVEKVNAPGGK--------GSGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             ---------c---Cccce--eccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccceEEEEEECCCCcEEEEeccC
Confidence                     1   11111  13667889999999987777766555432        23445788889999999998831


Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC
Q 016432          180 DKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND  259 (389)
Q Consensus       180 ~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~  259 (389)
                      +.       |+              .   +-.|.++|.|+++++.||++.|||+..+.-..      .   ....|.-.+
T Consensus       145 p~-------s~--------------p---v~~V~l~VgdL~ks~kyw~~~lgM~ilekeek------~---t~~~mgYgd  191 (299)
T KOG2943|consen  145 PQ-------SD--------------P---VLQVMLNVGDLQKSIKYWEKLLGMKILEKEEK------Y---TRARMGYGD  191 (299)
T ss_pred             CC-------CC--------------C---eEEEEEEehhHHHHHHHHHHHhCcchhhhhhh------h---hhhhhccCC
Confidence            11       00              1   22588999999999999999999998753110      0   111222234


Q ss_pred             cceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCC
Q 016432          260 EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPS  322 (389)
Q Consensus       260 g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~  322 (389)
                      +.+.|+|.....          -+++-.|-|--.+|+-++|+...-+.++..    +-+++.+
T Consensus       192 ~q~~LElt~~~~----------~id~~kg~griafaip~d~~~~l~e~iK~~----n~~i~~~  240 (299)
T KOG2943|consen  192 EQCVLELTYNYD----------VIDRAKGFGRIAFAIPTDDLPKLQEAIKSA----NGTILTP  240 (299)
T ss_pred             cceEEEEEeccC----------cccccccceeEEEeccccccccHHHHHHHh----ccccccc
Confidence            557777643320          022223334444555557887778888877    6555553

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=98.99  E-value=5.9e-09  Score=86.92  Aligned_cols=87  Identities=18%  Similarity=0.234  Sum_probs=62.9

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC--CcceEEEeccCCCCCCCCchHHHHH
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN--DEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~--~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      +.+|+|+++.|.|++++.+||+++|||+......        .+ . ..+...  .+...+.+...              
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--------~~-~-~~~~~~~~~~~~~~~l~~~--------------   57 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--------QG-R-VYLKAWDEFDHHSIVLREA--------------   57 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--------Cc-e-EEEEccCCCcccEEEeccC--------------
Confidence            6789999999999999999999999999864321        11 1 222221  12233333211              


Q ss_pred             hhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          284 EHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                         ...|++|+||.|+   |+++.+++|+++    |+++...|
T Consensus        58 ---~~~~~~hiaf~v~~~~dv~~~~~~l~~~----G~~~~~~~   93 (122)
T cd07265          58 ---DTAGLDFMGFKVLDDADLEKLEARLQAY----GVAVERIP   93 (122)
T ss_pred             ---CCCCeeEEEEEeCCHHHHHHHHHHHHHC----CCcEEEcc
Confidence               2357899999997   899999999999    99988765

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.98  E-value=8.8e-09  Score=85.93  Aligned_cols=108  Identities=12%  Similarity=0.008  Sum_probs=76.6

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      .++.||.|.|+|++++++||++.|||++.....  .+     ...++.+  ...+.|...  +                 
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~--~-----------------   54 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--DG-----ALYLRMDDRAWRIAVHPG--E-----------------   54 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--CC-----eEEEEccCCceEEEEEeC--C-----------------
Confidence            368999999999999999999999998765421  11     1223333  345555431  0                 


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCee---ccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVI---LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~---~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   ..+..|++|.|+   |+++.+++|+++|+++...|..   ..+..+...+++|+|..++|+-
T Consensus        55 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~  116 (120)
T cd07252          55 -------------ADDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFW  116 (120)
T ss_pred             -------------CCceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEe
Confidence                         125678999997   5999999999999998765421   1122357788999999998875

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=98.98  E-value=5.1e-09  Score=89.89  Aligned_cols=121  Identities=12%  Similarity=0.194  Sum_probs=80.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++++|+|+++.|+|++++.+||+++|||++....          + ....+..  +...+.+..+..  ...        
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----------~-~~~~~~~--~g~~l~l~~~~~--~~~--------   57 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKG----------R-KTAYFDL--NGLWIALNEEKD--IPR--------   57 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeec----------C-eeEEEec--CCeEEEeeccCC--CCC--------
Confidence            4678999999999999999999999999986421          1 1122222  224444433321  000        


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      ...+.|++|+||.++  |+++++++|+++    |++++..| ...        .           .....++=.|.+|++
T Consensus        58 ~~~~~~~~hiaf~v~~~dv~~~~~~l~~~----G~~i~~~~-~~~--------~-----------~~~~~~~~~DPdGn~  113 (139)
T PRK04101         58 NEIHQSYTHIAFSIEEEDFDHWYQRLKEN----DVNILPGR-ERD--------E-----------RDKKSIYFTDPDGHK  113 (139)
T ss_pred             ccCCCCeeEEEEEecHHHHHHHHHHHHHC----CceEcCCc-ccc--------C-----------CCceEEEEECCCCCE
Confidence            112357899999998  999999999999    99988765 211        0           011334556788888


Q ss_pred             EEEeccccCC
Q 016432          363 LQIFTKPVGD  372 (389)
Q Consensus       363 lqift~~~~~  372 (389)
                      +.+.+--+-|
T Consensus       114 iEl~~~~~~~  123 (139)
T PRK04101        114 FEFHTGTLQD  123 (139)
T ss_pred             EEEEeCCHHH
Confidence            8887765433

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.97  E-value=1e-08  Score=85.83  Aligned_cols=119  Identities=10%  Similarity=0.066  Sum_probs=77.2

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      .+|.|.|+|++++++||.. |||+.......+.+     ..+...++..+.|........               +....
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~~-----~~~~~~~~~~l~l~~~~~~~~---------------~~~~~   60 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEKA-----ACMVISDNIFVMLLTEDFFQT---------------FTPKP   60 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCCe-----EEEEECCceEEEEEcHHHHhh---------------ccCCC
Confidence            6899999999999999975 99997753221111     222223456776654311000               00000


Q ss_pred             HHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          114 CRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      .   ....+.+..|+||.|+   |+++++++++++|++++.+|....+ .....+++|+|..++++.
T Consensus        61 ~---~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~-~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          61 I---ADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGF-MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             c---ccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc-eEEEEEECCCCCEEEEEE
Confidence            0   0001234568999998   6999999999999999888876543 345678899999988763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.96  E-value=1.7e-08  Score=82.78  Aligned_cols=105  Identities=16%  Similarity=0.090  Sum_probs=76.0

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-C--CEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-G--DLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g--~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      ..+.|+|++++++||++.|||+.....    +.    ...++. +  +..+.+....  .                    
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~--~--------------------   53 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----GW----IATFASPQNMTVQVSLATEG--G--------------------   53 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----Cc----eEEEeecCCCCcEEEEecCC--C--------------------
Confidence            468899999999999999999986431    11    222332 2  3555554321  0                    


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                              .+....+++|.|+|+++++++++++|+++..+|....+..+...+.+|+|..++++++
T Consensus        54 --------~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          54 --------TATVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             --------CCCCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence                    0113458999999999999999999999988876544555677889999999988863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.96  E-value=5.9e-09  Score=85.34  Aligned_cols=95  Identities=23%  Similarity=0.286  Sum_probs=69.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc-ceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE-MVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g-~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      ||++.|.|++++++||+++|||++.++...      ..+.....+..+++ .+.|.+..+..   ..+.    . ...+.
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~----~-~~~~~   66 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPM------GGGFRWVTVAPPGSPETSLVLAPPAN---PAAM----S-GLQPG   66 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeecc------CCCcEEEEEeCCCCCeeEEEEeCCCC---cccc----c-cccCC
Confidence            899999999999999999999999876431      12344444555554 67777654431   1111    1 12345


Q ss_pred             CcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          290 GVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       290 GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      |+.|++|.|+||.+++++|+++    |++++.+|
T Consensus        67 ~~~~~~~~v~di~~~~~~l~~~----g~~~~~~~   96 (119)
T cd07263          67 GTPGLVLATDDIDATYEELKAR----GVEFSEEP   96 (119)
T ss_pred             CceEEEEEehHHHHHHHHHHhC----CCEEeecc
Confidence            7889999999999999999999    99998766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.96  E-value=1.4e-08  Score=84.57  Aligned_cols=111  Identities=16%  Similarity=0.140  Sum_probs=78.0

Q ss_pred             EEEEEEEeCCHHHHHHHHHHh---cCCcEEEEecCCCCceeEEEEEEEc--CCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           33 FHHVEFWCTDATNTARRFSWG---LGMPIVAKSDLSTGNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~---lGF~~~~~~~~~~g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      ++||.+.|+|++++++||++.   |||+.+....  .  .   ...+..  ++..+.+..+.....              
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~--~---~~~~~~~~~~~~~~l~~~~~~~~--------------   59 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P--G---AVGYGKGGGGPDFWVTKPFDGEP--------------   59 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C--c---eeEeccCCCCceEEEeccccCCC--------------
Confidence            589999999999999999998   6999875531  1  1   122333  356677765321110              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeecc---CceEEEEEEecCCeEEEEe
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILD---NLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~---~~~~~~~v~~~gg~~~~fv  176 (389)
                                  ....+..||||.|+|   +++.+++++++|+++..+|....   +......+++|+|..++++
T Consensus        60 ------------~~~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          60 ------------ATAGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ------------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence                        011234699999996   88999999999999888776543   2334677889999998876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=98.96  E-value=7.9e-09  Score=91.05  Aligned_cols=117  Identities=16%  Similarity=0.123  Sum_probs=78.0

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-CcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-DEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      +|+||++.|+|++++.+||+++|||++.....         + ...+.... .....|.+......  ..       ...
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---------~-~~~~~~~~~~~~~~l~l~~~~~~--~~-------~~~   61 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---------D-RVRLEEGGGGPGAVVDVLEEPDQ--PR-------GRP   61 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---------C-EEEEEecCCCCCCEEEEEeCCCC--CC-------Ccc
Confidence            47999999999999999999999999875432         1 11222221 12456666554210  00       011


Q ss_pred             CCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      +..|++||||.|+|   +++++++|+++    |+++.. | ..+        +            ....+|=+|.+|.++
T Consensus        62 ~~~~l~Hiaf~v~d~~dvd~~~~~L~~~----Gv~~~~-~-~~~--------~------------~~~s~yf~DPdG~~i  115 (157)
T cd08347          62 GAGTVHHVAFRVPDDEELEAWKERLEAL----GLPVSG-I-VDR--------F------------YFKSLYFREPGGILF  115 (157)
T ss_pred             cCCceEEEEEECCCHHHHHHHHHHHHHC----CCCccc-c-ccc--------c------------cEEEEEEECCCCcEE
Confidence            23579999999998   89999999999    997543 3 111        0            012346677889999


Q ss_pred             EEeccc
Q 016432          364 QIFTKP  369 (389)
Q Consensus       364 qift~~  369 (389)
                      ++++.+
T Consensus       116 El~~~~  121 (157)
T cd08347         116 EIATDG  121 (157)
T ss_pred             EEEECC
Confidence            999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.96  E-value=1.4e-08  Score=84.81  Aligned_cols=115  Identities=13%  Similarity=0.138  Sum_probs=78.2

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      ++|.|+++.|+|++++++||+++|||++.+...        .+  ..++..++..+.+.|....                
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--------~~--~~~~~~~~~~~~~~l~~~~----------------   54 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--------DG--ALYLRMDDRAWRIAVHPGE----------------   54 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--------CC--eEEEEccCCceEEEEEeCC----------------
Confidence            368899999999999999999999998854311        11  2334444445566664321                


Q ss_pred             CCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                       ..+..|+||.++   ||++.+++|+++    |+++...| ..-..   .+-.           .  ..++=.|.+|..+
T Consensus        55 -~~~~~~~~f~v~~~~dl~~~~~~l~~~----Gv~~~~~~-~~~~~---~~~~-----------~--~~~~~~DPdG~~i  112 (120)
T cd07252          55 -ADDLAYAGWEVADEAALDALAARLRAA----GVAVEEGS-AELAA---ERGV-----------E--GLIRFADPDGNRH  112 (120)
T ss_pred             -CCceeEEEEEECCHHHHHHHHHHHHHc----CCeEEEcC-HHHHh---hCCC-----------c--EEEEEECCCCCEE
Confidence             246789999997   599999999999    99998765 21100   0000           0  1335567888899


Q ss_pred             EEeccc
Q 016432          364 QIFTKP  369 (389)
Q Consensus       364 qift~~  369 (389)
                      .+|+-+
T Consensus       113 E~~~~~  118 (120)
T cd07252         113 ELFWGP  118 (120)
T ss_pred             EEEecc
Confidence            888754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.96  E-value=1.9e-08  Score=83.46  Aligned_cols=109  Identities=17%  Similarity=0.099  Sum_probs=77.2

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      -||.|.|+|++++.+||++.|||+.....+   +   ........+.+.+.+..+...                      
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~----------------------   54 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD---D---YAKFLLEDPRLNFVLNERPGA----------------------   54 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC---C---eeEEEecCCceEEEEecCCCC----------------------
Confidence            389999999999999999999998765532   1   112222334455555432100                      


Q ss_pred             HHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccC--ceEEEEEEecCCeEEEEee
Q 016432          114 CRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDN--LAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~--~~~~~~v~~~gg~~~~fve  177 (389)
                             ...++.|+||+|+|   +++.++++.++|+++..+|.....  ......+++|+|..++|+.
T Consensus        55 -------~~~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  116 (120)
T cd07254          55 -------PGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFV  116 (120)
T ss_pred             -------CCCCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEE
Confidence                   01378899999997   799999999999998776543211  2346788999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=98.94  E-value=1.6e-08  Score=83.90  Aligned_cols=108  Identities=20%  Similarity=0.113  Sum_probs=76.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc---C-CEEEEEEccCCCCCccccccCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS---G-DLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~---g-~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +++++||.|.|+|++++.+||++.|||++....+   +     ...++.   + ...+.+..+                 
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~-----------------   56 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD---D-----RIYLRGLEEFIHHSLVLTKA-----------------   56 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC---C-----eEEEEecCCCceEEEEEeeC-----------------
Confidence            6789999999999999999999999999875421   1     112221   1 123333321                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCee-ccCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     ...++.|++|.|   +|+++++++++++|+++...|.. .++......+.+|+|..++++.
T Consensus        57 ---------------~~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  117 (121)
T cd07266          57 ---------------PVAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYA  117 (121)
T ss_pred             ---------------CCCceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEe
Confidence                           113688999999   58999999999999998665432 2233346678889999888764

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=98.94  E-value=1.1e-08  Score=85.51  Aligned_cols=112  Identities=20%  Similarity=0.307  Sum_probs=76.9

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +|+|+.+.|+|++++.+||+++|||++.....        .+   ..+..+...+.+.+....               ..
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--------~~---~~~~~~~~~~~l~~~~~~---------------~~   54 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--------KG---AYLEAGDLWLCLSVDANV---------------GP   54 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--------Cc---eEEecCCEEEEEecCCCC---------------CC
Confidence            58999999999999999999999999864321        11   122222222333222111               02


Q ss_pred             CCCcceEEEEe--CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEE
Q 016432          288 GAGVQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI  365 (389)
Q Consensus       288 g~GvqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqi  365 (389)
                      ..+++||||.+  +|+++++++|+++    |+++...| ..+        +              ..+|=.|.+|+.+.+
T Consensus        55 ~~~~~hi~f~v~~~dl~~~~~~l~~~----G~~~~~~~-~~~--------~--------------~~~~f~DPdG~~ie~  107 (121)
T cd07244          55 AKDYTHYAFSVSEEDFASLKEKLRQA----GVKEWKEN-TSE--------G--------------DSFYFLDPDGHKLEL  107 (121)
T ss_pred             CCCeeeEEEEeCHHHHHHHHHHHHHc----CCcccCCC-CCC--------c--------------cEEEEECCCCCEEEE
Confidence            35689999998  6899999999999    99877655 220        1              134557788999999


Q ss_pred             eccccCC
Q 016432          366 FTKPVGD  372 (389)
Q Consensus       366 ft~~~~~  372 (389)
                      |+.++-.
T Consensus       108 ~~~~~~~  114 (121)
T cd07244         108 HVGSLAS  114 (121)
T ss_pred             EeCCHHH
Confidence            9877643

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=98.93  E-value=2.4e-08  Score=82.20  Aligned_cols=103  Identities=11%  Similarity=-0.005  Sum_probs=69.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--CCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +|+||.|.|+|++++.+||. .|||++..+.+     .   ..++..  +...+.+...  +                  
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~--~------------------   52 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-----G---LELRTAGNDHRWARLLEG--A------------------   52 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-----c---eEEEecCCCceEEEeecC--C------------------
Confidence            68999999999999999997 79999875421     1   222222  2233333321  0                  


Q ss_pred             ChHHHHHHHHhcCCceeE--EEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARS--IAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~--iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  +.++.+  ++|.++|++++++++.++|++++.+|..  .......+++|+|+.++|..
T Consensus        53 ------------~~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~--~~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          53 ------------RKRLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPG--ADPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             ------------CCceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCc--CCCCEEEEECCCCCEEEEec
Confidence                        112333  4555689999999999999998776522  22334677888998887764

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.93  E-value=1.7e-08  Score=83.55  Aligned_cols=103  Identities=16%  Similarity=0.152  Sum_probs=72.1

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACR  115 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (389)
                      ..+.|+|++++++||.+ |||++....+        ....++.|+..+.|.....+.                       
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~--------~~~~l~~~~~~l~l~~~~~~~-----------------------   52 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND--------NLAYFRLGNCAFYLQDYYVKD-----------------------   52 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC--------CEEEEEcCCEEEEeecCCCcc-----------------------
Confidence            35789999999999986 9999987642        134456788887776432111                       


Q ss_pred             HHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCccc-----CCCeeccCceEEEEEEecCCeEEEEe
Q 016432          116 SFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPS-----SPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       116 ~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i-----~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                           . .+-.+++|.|+|+++++++++++|+++.     .+|...+...+...+++|+|..+.|.
T Consensus        53 -----~-~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~  112 (113)
T cd08356          53 -----W-AENSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIG  112 (113)
T ss_pred             -----c-ccCCEEEEEECCHHHHHHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEee
Confidence                 0 1123589999999999999999999753     23333334456777788888877664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=98.93  E-value=4.2e-08  Score=83.05  Aligned_cols=113  Identities=18%  Similarity=0.169  Sum_probs=79.0

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +|+||.+.|+|++++++||++.|||++....+.   ..   ...+..+   ...+.+.....+.                
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~---~~---~~~~~~~~~~~~~l~l~~~~~~~----------------   58 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL---GG---LVFLSRDPDEHHQIALITGRPAA----------------   58 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC---Cc---EEEEEecCCCceEEEEEecCCCC----------------
Confidence            589999999999999999999999998765321   01   2233332   4566665432111                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                          .     .....++.|+||.|+|++   ++++++.++|++++..+..  +......+++|+|..++|+.
T Consensus        59 ----~-----~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  119 (134)
T cd08348          59 ----P-----PPGPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDH--GNAWSIYFRDPDGNRLELFV  119 (134)
T ss_pred             ----C-----CCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCC--CceeEEEEECCCCCEEEEEE
Confidence                0     012347889999999765   5889999999987765432  23356678899999999987

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.92  E-value=8.8e-09  Score=85.27  Aligned_cols=118  Identities=13%  Similarity=0.091  Sum_probs=78.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +-||.|.|.|++++++||++.|||++..+.   ++.    ...++.++ ..+.+..+..... .       ....+    
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~----~~~l~~~~~~~~~l~~~~~~~~-~-------~~~~~----   61 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRR----LAFFWVGGRGMLLLFDPGATST-P-------GGEIP----   61 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCc----eEEEEcCCCcEEEEEecCCccc-c-------cCCCC----
Confidence            358999999999999999999999988641   111    23344444 4455544321100 0       00000    


Q ss_pred             HHHHHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                             .....++.|+||.|  +|++++++++.++|+++...+.. ....+...+++|+|..+++++
T Consensus        62 -------~~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          62 -------PHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQW-PRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             -------CCCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccC-CCCeeEEEEECCCCCEEEEec
Confidence                   01123788999999  58999999999999988665542 233456778899999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=98.92  E-value=2.3e-08  Score=86.65  Aligned_cols=86  Identities=19%  Similarity=0.316  Sum_probs=62.9

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+|+|+.+.|.|++++.+||+++|||+......         . ...++....+...+.+...                 
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---------~-~~~~l~~~~~~~~~~l~~~-----------------   55 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---------D-QMAFLRCNSDHHSIAIARG-----------------   55 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---------C-eEEEEECCCCcceEEEccC-----------------
Confidence            479999999999999999999999999753211         1 1233444433444554322                 


Q ss_pred             CCCCcceEEEEeCCHHHHH---HHHHHhcCCCCceecCCC
Q 016432          287 EGAGVQHLALVSEDIFRTL---REMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       287 ~g~GvqHiAf~vdDI~~a~---~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+++|+||.|+|+.+..   ++|+++    |++++..|
T Consensus        56 ~~~~~~hiaf~v~d~~~l~~~~~~l~~~----Gi~~~~~~   91 (144)
T cd07239          56 PHPSLNHVAFEMPSIDEVMRGIGRMIDK----GIDILWGP   91 (144)
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHHHHc----CCceeeCC
Confidence            1357999999999987765   899999    99988765

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.91  E-value=4.2e-08  Score=87.80  Aligned_cols=167  Identities=16%  Similarity=0.125  Sum_probs=84.5

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC-CceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST-GNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~-g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      ||||.+.|+|++++.++|.+.|||++.....-+. |+.+. ...+  ++..|+|..+. +.... .          .++.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~-li~f--~~~YlEli~i~-~~~~~-~----------~~~~   65 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANA-LIPF--GDGYLELIAID-PEAPA-P----------DRGR   65 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEE-EEE---SSSEEEEEEES--HHHS-T----------GGGT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEE-EEee--CCceEEEEEeC-Ccccc-c----------cccc
Confidence            7999999999999999998899999887544333 44322 2333  44489888853 22100 0          0000


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEec------CCeEEEEeecCCCCCC
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLY------GDVVLRYVSYKDKANH  184 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~------gg~~~~fve~~~~~~~  184 (389)
                      -.....+ .+++|+..+||+++|+++..+++.+.|... ..+....+ .+++..+...      ++..-.||+..     
T Consensus        66 ~~~~~~~-~~~~g~~~~~l~t~d~~~~~~~l~~~G~~~-~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~-----  138 (175)
T PF13468_consen   66 WFGLDRL-AGGEGLYGWALRTDDIEAVAARLRAAGLDA-GSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWE-----  138 (175)
T ss_dssp             -TTTHHH-HT--EEEEEEEE-S-HHHHHHHHHTTT-EE-EEEEEEEE-EEEEEEEEEE-SS---SS---EEEEES-----
T ss_pred             ceechhh-cCCCCeEEEEEecCCHHHHHHHHHhcCCCC-CCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeC-----
Confidence            0000122 267899999999999999999999999861 11111111 1222222211      12233344310     


Q ss_pred             CCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhh
Q 016432          185 LDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFT  230 (389)
Q Consensus       185 g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~l  230 (389)
                          +. .+.  .  ...+.+..+|++|.+.++|.+.+..+|.++|
T Consensus       139 ----~~-~~~--~--~~h~ng~~~i~~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  139 ----TP-HPE--W--ARHPNGALGITRVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             ----S--CCH--H--TTT--TTEEEEEEEEEETTHHHHHHHHHHH-
T ss_pred             ----CC-Ccc--c--ccCCCccceEEEEEEEeCCHHHHHHHHHhhC
Confidence                00 000  0  1224478999999999999999999999875

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.91  E-value=7.4e-09  Score=86.08  Aligned_cols=117  Identities=14%  Similarity=-0.011  Sum_probs=72.5

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      ||.|.|+|++++++||++.|||++.....     .   ...+..++..+.+.....+....         ..+     ..
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~-----~---~~~~~~~~~~~~l~~~~~~~~~~---------~~~-----~~   59 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE-----T---WVDFDFFGHQLVAHLSPNFNADA---------SDN-----AV   59 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC-----C---cccccccCcEEEEEeccCCCccc---------ccC-----CC
Confidence            99999999999999999999999864321     1   11233333344333211110000         000     00


Q ss_pred             HHHHHhcCCceeEE--EEEEcCHHHHHHHHHHCCCcccCCCeec----cCceEEEEEEecCCeEEEEee
Q 016432          115 RSFAASHGLAARSI--AVEVEDADVAFNTSVAHGAKPSSPPVIL----DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       115 ~~~l~~hg~gv~~i--af~V~Dvda~~~~a~a~Ga~~i~~P~~~----~~~~~~~~v~~~gg~~~~fve  177 (389)
                          .....+..|+  +|.++|+++++++++++|+++..+|...    .+..+...+++|+|..++|..
T Consensus        60 ----~~~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          60 ----DGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             ----CCCccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence                0001133444  5677899999999999999998877542    123466778899999988864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.91  E-value=2.7e-08  Score=96.51  Aligned_cols=117  Identities=12%  Similarity=0.088  Sum_probs=78.8

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC-EE-EEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD-LR-FVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~-~~-i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+.+|+||.|.|+|++++.+||++.|||++..+...+.+... ....+..++ .. +.                     
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------------------  198 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQ-AAAWLSVSNKAHDIA---------------------  198 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEE-EEEEEEcCCCCcccc---------------------
Confidence            3578999999999999999999999999998655322222210 111222211 10 11                     


Q ss_pred             CCCCChHHHHHHHHhcCCc-eeEEEEEEcC---HHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLA-ARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~g-v~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                 +....+.| +.||||+|+|   +++++++++++|+++..+|.... .......+++|+|..+++..
T Consensus       199 -----------~~~~~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       199 -----------FVGDPEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             -----------eecCCCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence                       01112335 8999999996   66688899999999877775322 12347788999999999874

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.90  E-value=7.4e-09  Score=83.66  Aligned_cols=93  Identities=19%  Similarity=0.174  Sum_probs=64.7

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      |+|+++.|+|++++++||+++|||+.......       .. ...++..+++ ..+.|.....   ....      ...+
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~-------~~-~~~~~~~~~~-~~i~l~~~~~---~~~~------~~~~   62 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF-------LF-PGAWLYAGDG-PQLHLIEEDP---PDAL------PEGP   62 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCC-------CC-CceEEEeCCC-cEEEEEecCC---Cccc------cCCC
Confidence            68999999999999999999999987643221       11 1123333333 2444443321   1110      1134


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+..|++|.|+||.+++++|+++    |++++.+|
T Consensus        63 ~~~~~~~~~v~d~~~~~~~l~~~----g~~~~~~~   93 (114)
T cd07245          63 GRDDHIAFRVDDLDAFRARLKAA----GVPYTESD   93 (114)
T ss_pred             cccceEEEEeCCHHHHHHHHHHc----CCCccccc
Confidence            57899999999999999999999    99988876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=98.89  E-value=1.2e-08  Score=86.84  Aligned_cols=116  Identities=15%  Similarity=0.170  Sum_probs=76.7

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      |+||++.|+|++++.+||+++|||++....         .+  ...+..  +..++.+.....  ...        ....
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---------~~--~~~~~~--~~~~l~l~~~~~--~~~--------~~~~   57 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---------EK--TAYFTI--GGTWLALNEEPD--IPR--------NEIR   57 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---------Cc--cceEee--CceEEEEEccCC--CCc--------CCcC
Confidence            689999999999999999999999975321         11  111222  234555544321  000        1123


Q ss_pred             CCcceEEEEeCC--HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEe
Q 016432          289 AGVQHLALVSED--IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF  366 (389)
Q Consensus       289 ~GvqHiAf~vdD--I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqif  366 (389)
                      .|++||||.+++  +++.+++|++.    |+++...| ..+..      +             ..-++=+|.+|+.+.++
T Consensus        58 ~~~~hiaf~v~~~dld~~~~~l~~~----G~~~~~~~-~~~~~------~-------------~~~~~f~DPdG~~iEl~  113 (131)
T cd08363          58 QSYTHIAFTIEDSEFDAFYTRLKEA----GVNILPGR-KRDVR------D-------------RKSIYFTDPDGHKLEVH  113 (131)
T ss_pred             ccceEEEEEecHHHHHHHHHHHHHc----CCcccCCC-ccccC------c-------------ceEEEEECCCCCEEEEe
Confidence            478999999984  99999999999    99987665 32210      0             01235567788888888


Q ss_pred             ccccC
Q 016432          367 TKPVG  371 (389)
Q Consensus       367 t~~~~  371 (389)
                      +...-
T Consensus       114 ~~~~~  118 (131)
T cd08363         114 TGTLA  118 (131)
T ss_pred             cCcHH
Confidence            76543

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=98.88  E-value=2.3e-08  Score=82.90  Aligned_cols=100  Identities=13%  Similarity=0.139  Sum_probs=65.8

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC--CcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN--DEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~--~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +|+|+++.|.|++++++||+++|||+........+    ..+.....+...  .+...+.|.+....  ...      ..
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~------~~   68 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQD----DPGTYHLFFGDGLGSPGTLLTFFEWPDA--GPK------GR   68 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccC----CCceEEEEEecCCCCCCCEEEEEecCCC--CCC------CC
Confidence            47899999999999999999999999876543211    011222333322  23345655443211  110      11


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ....|+.|+||.|+   |+.+++++++++    |+++..++
T Consensus        69 ~~~~~~~hi~f~v~~~~~~~~~~~~~~~~----g~~~~~~~  105 (126)
T cd08346          69 RGPGQIHHIAFSVPSEASLDAWRERLRAA----GVPVSGVV  105 (126)
T ss_pred             CCCCcEEEEEEEcCCHHHHHHHHHHHHHc----CCcccceE
Confidence            23356899999998   579999999999    99987644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=98.88  E-value=2e-08  Score=84.05  Aligned_cols=85  Identities=20%  Similarity=0.342  Sum_probs=62.0

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+++|+++.|.|++++++||+++|||+.....          +.. ..+...+ ...|.+.++.                
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----------~~~-~~~~~~~-~~~l~~~~~~----------------   54 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----------GPF-AVVKLDN-GVSLDFAQPD----------------   54 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----------CCE-EEEEcCC-CcEEEEecCC----------------
Confidence            57899999999999999999999999986522          211 1122222 2445444331                


Q ss_pred             CCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCC
Q 016432          287 EGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       287 ~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+..|+||.++  ||++++++|+++    |+++...|
T Consensus        55 ~~~~~~h~a~~v~~~dl~~~~~~l~~~----G~~~~~~~   89 (123)
T cd08351          55 GEIPPQHYAFLVSEEEFDRIFARIRER----GIDYWADP   89 (123)
T ss_pred             CCCCcceEEEEeCHHHHHHHHHHHHHc----CCceecCC
Confidence            1234799999997  699999999999    99998876

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.88  E-value=3e-08  Score=85.77  Aligned_cols=107  Identities=12%  Similarity=0.098  Sum_probs=74.7

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCE-EEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDL-RFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~-~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      .||.|.|+|++++++||++.|||++..+.+    .  . ...++. ++. ...+..  .                     
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~----~--~-~~~l~~~~~~~~h~~~~--~---------------------   50 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE----D--R-IVFMRCHPNPFHHTFAV--G---------------------   50 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC----C--E-EEEEEcCCCCCcceeee--c---------------------
Confidence            499999999999999999999999876532    1  1 223332 221 111110  0                     


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                             .....|+.||||.|+|   ++++++++.++|+++...|.... .......+++|+|..++|.-
T Consensus        51 -------~~~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          51 -------PASSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             -------cCCCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence                   0123489999999985   56789999999999877765422 34456788999999998865

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.87  E-value=3.6e-08  Score=82.14  Aligned_cols=116  Identities=18%  Similarity=0.296  Sum_probs=78.2

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      ++|+|+++.|.|++++.+||+++|||++....          + ....+...+....|.+.....   ..      ....
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~----------~-~~~~l~~~~~~~~l~l~~~~~---~~------~~~~   60 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT----------D-STAVLGTGGKRPLLVLEEDPD---AP------PAPP   60 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC----------C-CEEEEecCCCeEEEEEEeCCC---CC------cccC
Confidence            47999999999999999999999999997541          1 123344333345666654431   10      0112


Q ss_pred             CCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      ...|++|+||.|+   |+++.+++|+++    |+++..+. ...+                   .  .-+|=.|.+|.++
T Consensus        61 ~~~~~~hi~f~v~~~~~v~~~~~~l~~~----g~~~~~~~-~~~~-------------------~--~~~~~~DPdG~~i  114 (125)
T cd07255          61 GATGLYHFAILLPSRADLAAALRRLIEL----GIPLVGAS-DHLV-------------------S--EALYLSDPEGNGI  114 (125)
T ss_pred             CCCcEEEEEEECCCHHHHHHHHHHHHHc----CCceeccc-cccc-------------------e--eEEEEECCCCCEE
Confidence            3467999999997   599999999999    99775432 2111                   0  1235567888899


Q ss_pred             EEecc
Q 016432          364 QIFTK  368 (389)
Q Consensus       364 qift~  368 (389)
                      ++++.
T Consensus       115 Ei~~~  119 (125)
T cd07255         115 EIYAD  119 (125)
T ss_pred             EEEEe
Confidence            88864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=98.87  E-value=4.8e-08  Score=80.59  Aligned_cols=110  Identities=12%  Similarity=0.073  Sum_probs=72.8

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +++|+|+.+.|.|++++.+||++ |||++..+..         +  ..++...+....+.+....               
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~---------------   53 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---------D--ELYYRGYGTDPFVYVARKG---------------   53 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---------C--eEEEecCCCccEEEEcccC---------------
Confidence            57899999999999999999999 9998864411         1  1233332222222221111               


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEE
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI  365 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqi  365 (389)
                       ...++.|+||.|+|+++..+.+++.    |+.++..+ .       .+-+             ...++=.|++|..+.+
T Consensus        54 -~~~~~~~~af~v~~~~~~~~~~~~~----g~~~~~~~-~-------~~~~-------------~~~~~~~DPdG~~iEl  107 (113)
T cd07267          54 -EKARFVGAAFEAASRADLEKAAALP----GASVIDDL-E-------APGG-------------GKRVTLTDPDGFPVEL  107 (113)
T ss_pred             -CcCcccEEEEEECCHHHHHHHHHcC----CCeeecCC-C-------CCCC-------------ceEEEEECCCCCEEEE
Confidence             1257899999999999999998888    98877643 2       0000             0133556788888888


Q ss_pred             ecc
Q 016432          366 FTK  368 (389)
Q Consensus       366 ft~  368 (389)
                      +.-
T Consensus       108 ~~~  110 (113)
T cd07267         108 VYG  110 (113)
T ss_pred             Eec
Confidence            765

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.86  E-value=6e-08  Score=93.57  Aligned_cols=116  Identities=17%  Similarity=0.178  Sum_probs=78.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCE-EEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDL-RFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~-~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+++++||.|.|+|++++.+||++.|||++..+.....+.. . ...+.. +.. .+.+.                   
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-------------------  190 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNL-A-AAWLHRKGGVHDIALT-------------------  190 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcE-E-EEEEecCCCcCceEee-------------------
Confidence            467999999999999999999999999999876542222211 1 122221 211 12211                   


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCc--ccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAK--PSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~--~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                   ...+.|++|+||+|+|   +++..++|+++|.+  +...|.... +...+..+++|+|..++++.
T Consensus       191 -------------~~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~  255 (294)
T TIGR02295       191 -------------NGNGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYT  255 (294)
T ss_pred             -------------cCCCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEe
Confidence                         1124589999999998   66678999999987  444453211 12235778899999999876

The enzyme from Bacillus brevis contains manganese.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.83  E-value=2.1e-08  Score=96.64  Aligned_cols=116  Identities=14%  Similarity=0.111  Sum_probs=89.4

Q ss_pred             CCCCCCCCcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE--cCCEEEEEEccCCCCCcccc
Q 016432           22 NPKSDRFRVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAA   97 (389)
Q Consensus        22 ~~~~~~~~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~   97 (389)
                      ++.+...++..||||...|+  .++.++.||++.|||++....+.++-...+.+..+.  .|.++|-||++.+..     
T Consensus       157 ~~~~~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~-----  231 (363)
T COG3185         157 QGASGGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDK-----  231 (363)
T ss_pred             cccccccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCch-----
Confidence            45555667899999998875  677999999999999999876544322122233333  578999999864332     


Q ss_pred             ccCCCCCCCCCCChHHHHHHHHh-cCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec
Q 016432           98 DAGNSSASLPTFDHAACRSFAAS-HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL  156 (389)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~l~~-hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~  156 (389)
                                    +.+.+|+.. ||.||.||||.++|+-++.++++++|++++..|.+.
T Consensus       232 --------------sqi~efl~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~tY  277 (363)
T COG3185         232 --------------SQIGEFLREYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPETY  277 (363)
T ss_pred             --------------hHHHHHHHHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCchhH
Confidence                          367777764 588999999999999999999999999999888764

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.81  E-value=4e-08  Score=81.18  Aligned_cols=96  Identities=18%  Similarity=0.244  Sum_probs=66.6

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +++|+|+.+.|.|++++++||+++|||+.......       .+.  ..+...+  ..+.+...... ..+      ...
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~-------~~~--~~~~~~~--~~~~l~~~~~~-~~~------~~~   62 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEE-------VGR--KALRFGS--QKINLHPVGGE-FEP------AAG   62 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeeccccc-------CCc--eEEEeCC--EEEEEecCCCc-cCc------Ccc
Confidence            46799999999999999999999999998754221       121  2233222  34555443210 000      011


Q ss_pred             cCCCCcceEEEEeCC-HHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSED-IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD-I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.|++|+||.+++ +++++++|+++    |++++..|
T Consensus        63 ~~~~~~~hi~~~~~~~~~~~~~~l~~~----G~~~~~~~   97 (125)
T cd07253          63 SPGPGSDDLCLITEPPIDELVAHLEAH----GVPIEEGP   97 (125)
T ss_pred             CCCCCCceEEEEecccHHHHHHHHHHC----CceeecCc
Confidence            245689999999975 99999999999    99998776

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.80  E-value=3.6e-08  Score=82.09  Aligned_cols=111  Identities=19%  Similarity=0.221  Sum_probs=74.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      .+.+|+|+++.|+|++++.+||+++|||++.....         +  ...+...+  ....+.+..+             
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~---------~--~~~l~~~~~~~~~~~~l~~~-------------   58 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG---------Q--SVYLRAWGDYEHHSLKLTES-------------   58 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC---------C--eEEEEeccCCCccEEEEeeC-------------
Confidence            47899999999999999999999999999865421         1  12232211  2233333221             


Q ss_pred             HhhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          283 LEHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                          ...|++|+||.++   |+++..++|+++    |+++...+ ..        .+.          .  .-+|=+|.+
T Consensus        59 ----~~~~~~h~af~v~~~~~v~~~~~~l~~~----G~~~~~~~-~~--------~~~----------~--~~~~~~DPd  109 (121)
T cd09013          59 ----PEAGLGHIAWRASSPEALERRVAALEAS----GLGIGWIE-GD--------PGH----------G--KAYRFRSPD  109 (121)
T ss_pred             ----CCCceEEEEEEcCCHHHHHHHHHHHHHc----CCcccccc-CC--------CCC----------c--ceEEEECCC
Confidence                2357999999997   688999999999    99864433 11        010          0  123556778


Q ss_pred             ceEEEEecc
Q 016432          360 GTLLQIFTK  368 (389)
Q Consensus       360 g~llqift~  368 (389)
                      |..+.+|..
T Consensus       110 G~~iEl~~~  118 (121)
T cd09013         110 GHPMELYWE  118 (121)
T ss_pred             CCEEEEEEe
Confidence            888888764

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=98.80  E-value=5.3e-08  Score=80.84  Aligned_cols=112  Identities=20%  Similarity=0.188  Sum_probs=75.1

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHHH
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      +++|+|+.+.|+|++++.+||+++|||++.....         +  ..++....  ....+.+..+              
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~--------------   56 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD---------D--RIYLRGLEEFIHHSLVLTKA--------------   56 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC---------C--eEEEEecCCCceEEEEEeeC--------------
Confidence            6789999999999999999999999999864311         1  12222211  1223333211              


Q ss_pred             hhcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCc
Q 016432          284 EHNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQG  360 (389)
Q Consensus       284 ~~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g  360 (389)
                         ...|+.|++|.|   +|+++.+++|+++    |+++...| .....      +.            ...+|=.|++|
T Consensus        57 ---~~~~~~hi~~~v~~~~dv~~~~~~l~~~----g~~~~~~~-~~~~~------~~------------~~~~~~~DPdG  110 (121)
T cd07266          57 ---PVAGLGHIAFRVRSEEDLDKAEAFFQEL----GLPTEWVE-AGEEP------GQ------------GRALRVEDPLG  110 (121)
T ss_pred             ---CCCceeEEEEECCCHHHHHHHHHHHHHc----CCCccccc-CCcCC------CC------------ccEEEEECCCC
Confidence               124799999999   5899999999999    99988765 22110      10            01245667888


Q ss_pred             eEEEEecc
Q 016432          361 TLLQIFTK  368 (389)
Q Consensus       361 ~llqift~  368 (389)
                      ..+.+|+.
T Consensus       111 ~~ve~~~~  118 (121)
T cd07266         111 FPIEFYAE  118 (121)
T ss_pred             CEEEEEec
Confidence            88888864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PRK10291 glyoxalase I; Provisional

Probab=98.80  E-value=3.7e-08  Score=83.14  Aligned_cols=92  Identities=13%  Similarity=0.184  Sum_probs=61.7

Q ss_pred             EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          213 VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       213 ~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      ++.|.|+++++.||+++|||+.......+     ..+.+..++...+  ....+++.....  ..     .+   ..|.+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~-----~~---~~g~~   65 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENP-----EYKYSLAFVGYGPETEEAVIELTYNWG--VD-----KY---ELGTA   65 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCC-----CCcEEEEEEccCCCCCcceEEeeecCC--CC-----CC---cCCCC
Confidence            36899999999999999999987654322     1234444443322  122344432210  01     11   13568


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ++|+||.|+|+++++++|+++    |++++..|
T Consensus        66 ~~hlaf~V~d~~~~~~~l~~~----G~~~~~~~   94 (129)
T PRK10291         66 YGHIALSVDNAAEACEKIRQN----GGNVTREA   94 (129)
T ss_pred             eeEEEEEeCCHHHHHHHHHHc----CCccccCC
Confidence            999999999999999999999    99988765

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=98.79  E-value=4.3e-08  Score=84.29  Aligned_cols=104  Identities=20%  Similarity=0.266  Sum_probs=79.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchH-HHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQI-QTYL  283 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i-~~fl  283 (389)
                      -+.++.|+.+.+++.-+.+.||...||++.......     ...|.. .++...++.+++..|....     +.+ +.|+
T Consensus        39 fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~-----~~~~~~-v~~~~~~~~~ELthn~Gte-----s~~~~~~~  107 (170)
T KOG2944|consen   39 FYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPK-----PEHGVS-VFVFSRNAKLELTHNWGTE-----SPPDQAYL  107 (170)
T ss_pred             hhhhhccceeechhhhhHhhhHHHhhcccccccCcc-----CCCCCc-eEEecccCceeeecCCCCC-----CCcchhhc
Confidence            367788889999888888999999999887654332     234433 5666666777777766542     223 5688


Q ss_pred             hhcCCC-CcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          284 EHNEGA-GVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       284 ~~~~g~-GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+..+ |.+||||.|+||.+|+.+|++.    ||+|-..|
T Consensus       108 ngN~~prGfgHIci~V~di~sac~~lkek----GV~f~Kk~  144 (170)
T KOG2944|consen  108 NGNKEPRGFGHICIEVDDINSACERLKEK----GVRFKKKL  144 (170)
T ss_pred             CCCCCCCccceEEEEeCCHHHHHHHHHHh----CceeeecC
Confidence            777667 9999999999999999999999    99988877

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=98.78  E-value=1.6e-07  Score=79.41  Aligned_cols=117  Identities=21%  Similarity=0.250  Sum_probs=76.7

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-CcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-DEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      +|+|+++.|.|++++++||+++|||+......         +.....+..+ .....+.+.....   .. .      ..
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~---------~~~~~~~~~~~~~~~~l~l~~~~~---~~-~------~~   61 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGP---------LGGLVFLSRDPDEHHQIALITGRP---AA-P------PP   61 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeecc---------CCcEEEEEecCCCceEEEEEecCC---CC-C------CC
Confidence            58999999999999999999999999764422         1122333332 3345566654431   11 0      11


Q ss_pred             CCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      ...|++|+||.|+|+.   +.+++|.+.    |++++..+ ..         +.           . ..++=.|.+|..+
T Consensus        62 ~~~~~~h~~f~v~~~~~v~~~~~~l~~~----G~~~~~~~-~~---------~~-----------~-~~~~~~DP~G~~i  115 (134)
T cd08348          62 GPAGLNHIAFEVDSLDDLRDLYERLRAA----GITPVWPV-DH---------GN-----------A-WSIYFRDPDGNRL  115 (134)
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHC----CCCccccC-CC---------Cc-----------e-eEEEEECCCCCEE
Confidence            3457999999999865   588999999    99877644 11         00           0 1224467888888


Q ss_pred             EEeccc
Q 016432          364 QIFTKP  369 (389)
Q Consensus       364 qift~~  369 (389)
                      .+++..
T Consensus       116 e~~~~~  121 (134)
T cd08348         116 ELFVDT  121 (134)
T ss_pred             EEEEcC
Confidence            888643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=98.77  E-value=1.6e-07  Score=79.47  Aligned_cols=114  Identities=21%  Similarity=0.297  Sum_probs=75.4

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      +||++.|.|++++.+||+++|||+.......+       + ....++...+....+.+....                ..
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~----------------~~   57 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-------GVDAAAFLRCDEDHHDLALFPGP----------------ER   57 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-------CceeEEEEEcCCCcceEEEEcCC----------------CC
Confidence            69999999999999999999999986543210       2 123334333333344443221                14


Q ss_pred             CCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEE
Q 016432          289 AGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI  365 (389)
Q Consensus       289 ~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqi  365 (389)
                      .|++|++|.|+|++   +++++|+++    |++++..| ....      .+.          .  ..++=.|.+|+++.|
T Consensus        58 ~~~~hl~~~v~d~~~~~~~~~~l~~~----G~~i~~~~-~~~~------~~~----------~--~~~~~~DPdG~~iei  114 (131)
T cd08343          58 PGLHHVAFEVESLDDILRAADRLAAN----GIQIEFGP-GRHG------PGN----------N--LFLYFRDPDGNRVEL  114 (131)
T ss_pred             CCeeEEEEEcCCHHHHHHHHHHHHHc----CCeeEECC-CccC------CCC----------c--EEEEEECCCCCEEEE
Confidence            57999999999875   688999999    99998776 3100      000          0  122445678889988


Q ss_pred             eccc
Q 016432          366 FTKP  369 (389)
Q Consensus       366 ft~~  369 (389)
                      .+..
T Consensus       115 ~~~~  118 (131)
T cd08343         115 SAEM  118 (131)
T ss_pred             EcCC
Confidence            7654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>PRK06724 hypothetical protein; Provisional

Probab=98.76  E-value=5.4e-08  Score=82.80  Aligned_cols=86  Identities=10%  Similarity=0.163  Sum_probs=60.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhh---CCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFT---GFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~l---Gf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      +..+|+||++.|.|+++++.||+++|   ||+......               .  .++..++.|....    ..     
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------------~--~~g~~~l~l~~~~----~~-----   57 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------------Y--STGESEIYFKEVD----EE-----   57 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------------e--eCCCeeEEEecCC----cc-----
Confidence            45679999999999999999999977   555432111               0  1123334333221    00     


Q ss_pred             HHhhcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCC
Q 016432          282 YLEHNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       +.  ...|+.|+||.|   +|+++..++|+++    |++++..|
T Consensus        58 -~~--~~~g~~h~af~v~~~~dvd~~~~~l~~~----G~~~~~~p   95 (128)
T PRK06724         58 -IV--RTLGPRHICYQAINRKVVDEVAEFLSST----KIKIIRGP   95 (128)
T ss_pred             -cc--CCCCceeEEEecCChHHHHHHHHHHHHC----CCEEecCC
Confidence             11  135789999998   8899999999999    99998777

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.76  E-value=1.1e-07  Score=77.93  Aligned_cols=109  Identities=19%  Similarity=0.124  Sum_probs=74.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACR  115 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (389)
                      |.|.|+|++++++||++.|||++....+     .  .+.+...++..+.+........                   .  
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~-----~--~~~~~~~~~~~~~l~~~~~~~~-------------------~--   53 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP-----T--FALFVLGSGVKLGLWSRHTVEP-------------------A--   53 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC-----c--eEEEEeCCCcEEEEeeccccCC-------------------C--
Confidence            6799999999999999999999775421     1  1222223556666654321100                   0  


Q ss_pred             HHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          116 SFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       116 ~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                         .....+..|++|.|+|   +++++++++++|+++..+|...+.+ ....+++|+|..+++.
T Consensus        54 ---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g-~~~~~~DPdGn~ie~~  113 (114)
T cd07261          54 ---SDATGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFG-YTFVALDPDGHRLRVF  113 (114)
T ss_pred             ---CCCCCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccccCCc-cEEEEECCCCCEEEee
Confidence               0012256789999985   8999999999999998888764433 3567888888888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=98.76  E-value=5.8e-08  Score=79.68  Aligned_cols=85  Identities=22%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-CcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-DEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      ++|+|+++.|.|++++.+||+++|||+......           ...++... .+.+.+.+...                
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~----------------   53 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA-----------GSVYLRCSEDDHHSLVLTEG----------------   53 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC-----------CeEEEecCCCCcEEEEEEeC----------------
Confidence            478999999999999999999999999875421           11233333 34444544322                


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ...++.|+||.|+   |+++..++|+++    |+++...|
T Consensus        54 -~~~~~~h~~~~v~~~~~v~~~~~~l~~~----g~~~~~~~   89 (117)
T cd07240          54 -DEPGVDALGFEVASEEDLEALAAHLEAA----GVAPEEAS   89 (117)
T ss_pred             -CCCCceeEEEEcCCHHHHHHHHHHHHHc----CCceEEcC
Confidence             1246899999997   689999999999    99988876

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.75  E-value=4.7e-08  Score=84.57  Aligned_cols=110  Identities=11%  Similarity=0.092  Sum_probs=72.4

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc--ceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE--MVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g--~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      .||++.|+|++++++||+++|||++..+..         + ....+.+...  ...+.+..                 .+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---------~-~~~~l~~~~~~~~h~~~~~~-----------------~~   53 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---------D-RIVFMRCHPNPFHHTFAVGP-----------------AS   53 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---------C-EEEEEEcCCCCCcceeeecc-----------------CC
Confidence            499999999999999999999999875432         1 1223333211  22222211                 13


Q ss_pred             CCCcceEEEEeCCH---HHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          288 GAGVQHLALVSEDI---FRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       288 g~GvqHiAf~vdDI---~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                      ..|++||||.|+|+   +++.++|+++    |+++...| .. .       ..          ...-.+|=+|.+|.+++
T Consensus        54 ~~gl~Hiaf~v~~~~~v~~~~~~l~~~----G~~~~~~p-~~-~-------~~----------~~~~~~y~~DPdG~~iE  110 (141)
T cd07258          54 SSHFHHVNFMVTDIDDIGKALYRIKAH----DVKVVFGP-GR-H-------PP----------SDSIFFYFLDPDGITVE  110 (141)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHC----CCcEEeCC-ce-E-------CC----------CCCEEEEEECCCCCEEE
Confidence            45899999999765   6789999999    99987766 21 0       00          01123466788888888


Q ss_pred             Eeccc
Q 016432          365 IFTKP  369 (389)
Q Consensus       365 ift~~  369 (389)
                      +...-
T Consensus       111 ~~~~~  115 (141)
T cd07258         111 YSFGM  115 (141)
T ss_pred             EEeCc
Confidence            76643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.72  E-value=2.9e-07  Score=88.73  Aligned_cols=115  Identities=20%  Similarity=0.217  Sum_probs=76.3

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+|+||.|.|+|++++++||++.|||++......+  .|.. ....+++.++  ..+.+...  +              
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~-~~~~~l~~~~~~~~~~l~~~--~--------------  202 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVT-VRPYFLHCNERHHSLAFAAG--P--------------  202 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCc-ceEEEEEECCCcceEEEecC--C--------------
Confidence            579999999999999999999999999987653221  1211 0122333322  12332210  0              


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     .+.+++||||+|+|.++   ++++++++|+ ....|... .+......+++|+|..++|..
T Consensus       203 ---------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       203 ---------------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             ---------------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence                           23479999999998766   8999999999 44444221 123456678899999988864

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.72  E-value=2.2e-07  Score=76.80  Aligned_cols=92  Identities=17%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      +..+.|.|++++++||+++|||+.....          +. ...+...++.+.|.+..+...    .. ...-....+.+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----------~~-~~~~~~~~~~~~l~l~~~~~~----~~-~~~~~~~~~~~   67 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----------DW-YVSLRSPDGGVELAFMLPGHE----TV-PAAQYQFQGQG   67 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----------Cc-EEEEecCCCceEEEEccCCCC----CC-cchhcccCCce
Confidence            5788999999999999999999987531          11 122333333455655433210    00 00011123455


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      + |++|.|+||++++++|+++    |++++..|
T Consensus        68 ~-~~~~~v~did~~~~~l~~~----G~~~~~~~   95 (119)
T cd08359          68 L-ILNFEVDDVDAEYERLKAE----GLPIVLPL   95 (119)
T ss_pred             E-EEEEEECCHHHHHHHHHhc----CCCeeecc
Confidence            5 9999999999999999999    99988766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=98.72  E-value=2.4e-07  Score=76.12  Aligned_cols=108  Identities=20%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+|+|+++.|.|++++.+||+ .|||+.....         .+  ........+...+.+..+.                
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---------~~--~~~~~~~~~~~~~~~~~~~----------------   52 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG---------DG--LELRTAGNDHRWARLLEGA----------------   52 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec---------Cc--eEEEecCCCceEEEeecCC----------------
Confidence            369999999999999999997 6999986431         11  1111222233444443221                


Q ss_pred             CCCCcceEEEE--eCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          287 EGAGVQHLALV--SEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       287 ~g~GvqHiAf~--vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                       +.++.|++|.  ++|+++++++|+++    |++++..| ...        +            . .-++=.|.+|..+.
T Consensus        53 -~~~~~~~~~~~~~~d~~~~~~~l~~~----Gi~~~~~~-~~~--------~------------~-~~~~~~DP~Gn~ie  105 (112)
T cd08344          53 -RKRLAYLSFGIFEDDFAAFARHLEAA----GVALAAAP-PGA--------D------------P-DGVWFRDPDGNLLQ  105 (112)
T ss_pred             -CCceeeEEEEeEhhhHHHHHHHHHHc----CCceecCC-CcC--------C------------C-CEEEEECCCCCEEE
Confidence             2346676555  58999999999999    99987654 211        0            0 11355678898999


Q ss_pred             Eeccc
Q 016432          365 IFTKP  369 (389)
Q Consensus       365 ift~~  369 (389)
                      +++-+
T Consensus       106 l~~~~  110 (112)
T cd08344         106 VKVAE  110 (112)
T ss_pred             EecCC
Confidence            88643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=98.69  E-value=1.6e-07  Score=77.66  Aligned_cols=86  Identities=23%  Similarity=0.325  Sum_probs=62.0

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC-cceEEEeccCCCCCCCCchHHHHHh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND-EMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~-g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      +.+|+|+.+.|+|++++.+||+++|||+......         +  ..++.... ..+.+.+...               
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~---------------   54 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD---------G--IVYLRATGSEHHILRLRRS---------------   54 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC---------C--EEEEECCCCccEEEEeccC---------------
Confidence            4689999999999999999999999999753311         1  12333222 2222333211               


Q ss_pred             hcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                        ..+++.|++|.|   +||++.+++|++.    |+++...|
T Consensus        55 --~~~~~~~~~~~v~~~~~l~~~~~~l~~~----G~~~~~~~   90 (120)
T cd08362          55 --DRNRLDVVSFSVASRADVDALARQVAAR----GGTVLSEP   90 (120)
T ss_pred             --CCCCCceEEEEeCCHHHHHHHHHHHHHc----CCceecCC
Confidence              124689999999   6799999999999    99988765

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=98.67  E-value=1.9e-07  Score=74.29  Aligned_cols=90  Identities=24%  Similarity=0.300  Sum_probs=68.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      |+++.|.|++++.+||+++|||+.......       .+.....+..+  ...|.|..+...  ...        .++.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-------~~~~~~~~~~~--~~~i~l~~~~~~--~~~--------~~~~~   61 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-------GGAEFAVLGLG--GTRLELFEGDEP--APA--------PSGGG   61 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-------CCEEEEEEecC--CceEEEecCCCC--CCc--------ccCCC
Confidence            899999999999999999999998766431       12233444433  567777776521  111        24567


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ++|++|.|+|+.+.+++|++.    |+.+..+|
T Consensus        62 ~~~~~~~v~~~~~~~~~l~~~----g~~~~~~~   90 (112)
T cd06587          62 GVHLAFEVDDVDAAYERLKAA----GVEVLGEP   90 (112)
T ss_pred             eeEEEEECCCHHHHHHHHHHc----CCcccCCC
Confidence            999999999999999999999    99988876

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.67  E-value=2.7e-07  Score=76.45  Aligned_cols=110  Identities=16%  Similarity=0.211  Sum_probs=72.9

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      |+.+.|+|++++.+||+++|||+......         +...+.  ..+..+.+.+.....   .           ...|
T Consensus         4 hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~---~-----------~~~~   58 (120)
T cd07254           4 HVALNVDDLEASIAFYSKLFGVEPTKVRD---------DYAKFL--LEDPRLNFVLNERPG---A-----------PGGG   58 (120)
T ss_pred             EEEEEeCCHHHHHHHHHHHhCCeEecccC---------CeeEEE--ecCCceEEEEecCCC---C-----------CCCC
Confidence            99999999999999999999998753311         111122  222344455443321   0           1147


Q ss_pred             cceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEec
Q 016432          291 VQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFT  367 (389)
Q Consensus       291 vqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift  367 (389)
                      +.|+||.|+|   +++..++|+++    |+++...| ..-+.     .+            ....++=.|.+|..+.+++
T Consensus        59 ~~h~~f~v~~~~dl~~~~~~l~~~----G~~~~~~~-~~~~~-----~~------------~~~~~~~~DP~G~~ie~~~  116 (120)
T cd07254          59 LNHLGVQVDSAEEVAEAKARAEAA----GLPTFKEE-DTTCC-----YA------------VQDKVWVTDPDGNAWEVFV  116 (120)
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHHc----CCeEEccC-Ccccc-----cC------------CcceEEEECCCCCEEEEEE
Confidence            8999999988   78899999999    99998876 32110     00            0123456778888888776

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.66  E-value=3.7e-07  Score=77.65  Aligned_cols=100  Identities=14%  Similarity=0.160  Sum_probs=63.8

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEeccccc-----ccccCceEEE-EEc--CCcceEEEeccCCCCCCCCch
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVG-----TSESGLNSVV-LAN--NDEMVLLPMNEPVFGTKRKSQ  278 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~-----~~~~g~~s~~-~~~--~~g~v~l~l~e~~~~~~~~s~  278 (389)
                      +++.|+++.|.|++++++||+++|||++.++.+.++..     ...+|-.+.+ +..  ......++|.....   ..  
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~---~~--   75 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYG---IG--   75 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCC---CC--
Confidence            36889999999999999999999999987766543210     1122422222 321  23344565543221   11  


Q ss_pred             HHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          279 IQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       279 i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                        .+   ..|.|  |++|.++|+ ++.++|++.    |+++...|
T Consensus        76 --~~---~~g~~--~~hlav~~~-d~~~~l~~~----Gv~~~~~~  108 (127)
T cd08358          76 --DY---ELGND--FLGITIHSK-QAVSNAKKH----NWPVTEVE  108 (127)
T ss_pred             --CC---CCCCC--EEEEEEECH-HHHHHHHHC----CCceecCC
Confidence              01   12344  788888888 566999999    99888766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.64  E-value=3.2e-07  Score=76.26  Aligned_cols=97  Identities=11%  Similarity=0.178  Sum_probs=58.8

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH--hhcC
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL--EHNE  287 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl--~~~~  287 (389)
                      .|+.+.|.|++++.+||+++|||++......        + ....+..  +...+.+.....  ........+.  ....
T Consensus         2 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~--------~-~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   68 (125)
T cd07264           2 GYTIIYVEDVEKTLEFYERAFGFERRFLHES--------G-DYGELET--GETTLAFASHDL--AESNLKGGFVKADPAQ   68 (125)
T ss_pred             ceEEEEEcCHHHHHHHHHHhhCCeEEeecCC--------C-cEEEecC--CcEEEEEEcccc--cccccccCccCCcccc
Confidence            5999999999999999999999998643211        1 1111221  222333221110  0000000000  0001


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .++.-|++|.|+||++++++++++    |++++.+|
T Consensus        69 ~~~~~~~~~~v~di~~~~~~l~~~----G~~~~~~~  100 (125)
T cd07264          69 PPAGFEIAFVTDDVAAAFARAVEA----GAVLVSEP  100 (125)
T ss_pred             CCCcEEEEEEcCCHHHHHHHHHHc----CCEeccCC
Confidence            233459999999999999999999    99998876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.64  E-value=2e-07  Score=76.87  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=73.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHH
Q 016432           36 VEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACR  115 (389)
Q Consensus        36 I~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (389)
                      |.|.|+|++++.+||++.|||++..+..  .     ....++.++..+.+.+......         ....+.       
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~--~-----~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~-------   58 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN--D-----GVAFFQLGGLVLALFPREELAK---------DAGVPV-------   58 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC--C-----ceEEEEcCCeEEEEecchhhhh---------hcCCCC-------
Confidence            7899999999999999999999876511  1     1334455776776654211000         000000       


Q ss_pred             HHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          116 SFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       116 ~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                       .  ..+.+-.+++|.+   +|++++++++++.|+++..+|...+.......+++|+|..+++.
T Consensus        59 -~--~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~  119 (121)
T cd07251          59 -P--PPGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVA  119 (121)
T ss_pred             -C--CCCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEe
Confidence             0  0111233466554   68999999999999999877765443455677888888887764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.62  E-value=3.5e-07  Score=75.53  Aligned_cols=120  Identities=18%  Similarity=0.199  Sum_probs=75.0

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      |-|+.+.|.|++++++||+++|||++.+. . +       + ....+...++. .+.+..+..  ..  .....+.....
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~-~-~-------~-~~~~l~~~~~~-~~~l~~~~~--~~--~~~~~~~~~~~   65 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK-E-D-------R-RLAFFWVGGRG-MLLLFDPGA--TS--TPGGEIPPHGG   65 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec-C-C-------C-ceEEEEcCCCc-EEEEEecCC--cc--cccCCCCCCCC
Confidence            35899999999999999999999998753 1 1       1 12233333332 234333221  00  00011222234


Q ss_pred             CCcceEEEEe--CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEe
Q 016432          289 AGVQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF  366 (389)
Q Consensus       289 ~GvqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqif  366 (389)
                      .|++|+||.+  +|++++++++.++    |+++..++ ....       +          -+   -++=.|.+|.+++++
T Consensus        66 ~~~~~~~~~v~~~dl~~~~~~l~~~----g~~~~~~~-~~~~-------~----------~~---~~~~~DP~G~~ie~~  120 (122)
T cd08354          66 SGPGHFAFAIPAEELAEWEAHLEAK----GVAIESEV-QWPR-------G----------GR---SLYFRDPDGNLLELA  120 (122)
T ss_pred             CCccEEEEEcCHHHHHHHHHHHHhc----CCceeccc-cCCC-------C----------ee---EEEEECCCCCEEEEe
Confidence            5799999999  5899999999999    99887654 2110       1          01   134466788899888


Q ss_pred             cc
Q 016432          367 TK  368 (389)
Q Consensus       367 t~  368 (389)
                      |+
T Consensus       121 ~~  122 (122)
T cd08354         121 TP  122 (122)
T ss_pred             cC
Confidence            75

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=98.60  E-value=3.1e-07  Score=75.03  Aligned_cols=84  Identities=14%  Similarity=0.153  Sum_probs=58.7

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      |+.+.|+|++++++||+++|||+.......        +   ..+..+  ...+.+.....   ..         ..+.+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~--------~---~~~~~~--~~~l~~~~~~~---~~---------~~~~~   55 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK--------E---AYFELA--GLWICLMEEDS---LQ---------GPERT   55 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc--------e---eEEEec--CeEEEeccCCC---cC---------CCCCC
Confidence            899999999999999999999998654321        1   111111  34455543321   11         02346


Q ss_pred             cceEEEEe--CCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ++|+||.|  +|+++++++|+++    |+++...+
T Consensus        56 ~~hiaf~v~~~d~~~~~~~l~~~----G~~~~~~~   86 (113)
T cd08345          56 YTHIAFQIQSEEFDEYTERLKAL----GVEMKPER   86 (113)
T ss_pred             ccEEEEEcCHHHHHHHHHHHHHc----CCccCCCc
Confidence            89999999  5799999999999    99987543

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=98.58  E-value=3.1e-07  Score=79.11  Aligned_cols=124  Identities=14%  Similarity=0.091  Sum_probs=80.2

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEec-CCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSD-LSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~-~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +.++.|+.+.+++.-+.+.||...|||+...... ++.+.    ...+-.....++|+-|.++++.              
T Consensus        40 ytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~----~v~~~~~~~~~ELthn~Gtes~--------------  101 (170)
T KOG2944|consen   40 YTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGV----SVFVFSRNAKLELTHNWGTESP--------------  101 (170)
T ss_pred             hhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCC----ceEEecccCceeeecCCCCCCC--------------
Confidence            4566666677777666677777667766433221 11221    1222345566777766555421              


Q ss_pred             CChHHHHHHHH-hcCC-ceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCce-EEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAA-SHGL-AARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLA-VIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~-~hg~-gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~-~~~~v~~~gg~~~~fve  177 (389)
                          .-+.|+. .+.+ |.+||||.|+|+++++++++++|+++...|...  .. .++++.+|+|.-++++.
T Consensus       102 ----~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dG--k~K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  102 ----PDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDG--KMKPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             ----cchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCc--cccceeEEECCCCCeEEEee
Confidence                1122332 2334 999999999999999999999999976667652  33 58889999998887765

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=98.55  E-value=7.6e-07  Score=72.89  Aligned_cols=90  Identities=9%  Similarity=-0.022  Sum_probs=61.3

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      +.|+++.|+|+++++.||+++|||+..+... +      .+ ....+...+ ...+.+.....   ..         ...
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~------~~-~~~~~~~~~-~~~~~~~~~~~---~~---------~~~   59 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-G------GG-DYAVFSTGG-GAVGGLMKAPE---PA---------AGS   59 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-C------CC-ceEEEEeCC-ccEEEEecCCC---CC---------CCC
Confidence            4799999999999999999999999865421 0      11 222333222 22222222210   00         023


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+..|++|.|+||++++++|++.    |++++..|
T Consensus        60 ~~~~~~~f~v~di~~~~~~l~~~----g~~~~~~~   90 (114)
T cd07247          60 PPGWLVYFAVDDVDAAAARVEAA----GGKVLVPP   90 (114)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHHC----CCEEEeCC
Confidence            45789999999999999999999    99999877

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.54  E-value=1.1e-06  Score=71.87  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEc-CCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLAN-NDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~-~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      ..+.|+|++++..||+++|||+....          .+ ....+.+ ..+...+.+.....               .+.+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~~   57 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD----------HG-WIATFASPQNMTVQVSLATEGG---------------TATV   57 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc----------CC-ceEEEeecCCCCcEEEEecCCC---------------CCCC
Confidence            46788999999999999999998532          12 1122222 22245555543320               1234


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+|++|.|+|+++++++|+++    |+++...|
T Consensus        58 ~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~   86 (112)
T cd07238          58 VPDLSIEVDDVDAALARAVAA----GFAIVYGP   86 (112)
T ss_pred             CCEEEEEeCCHHHHHHHHHhc----CCeEecCC
Confidence            689999999999999999999    99988876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.54  E-value=2e-06  Score=70.82  Aligned_cols=91  Identities=20%  Similarity=0.169  Sum_probs=61.9

Q ss_pred             EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCc-eEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          213 VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL-NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       213 ~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~-~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      .+.|.|++++++||+++|||+.......+      .|. ....+...+  ..+.+..+.+.  . .    .... .+.+.
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~------~~~~~~~~l~~~~--~~~~l~~~~~~--~-~----~~~~-~~~~~   69 (122)
T cd07246           6 YLIVRDAAAAIDFYKKAFGAEELERMPDD------DGRVMHAELRIGD--SVLMLADEFPE--H-G----SPAS-WGGTP   69 (122)
T ss_pred             EEEECCHHHHHHHHHHhhCCEEEEEEeCC------CCCEEEEEEEECC--EEEEEecCCcc--c-C----CCCC-CCCce
Confidence            47778999999999999999988665421      232 222233322  34555544321  0 0    1111 24567


Q ss_pred             ceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          292 QHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       292 qHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .|++|.|+|++++++++.++    |++++.+|
T Consensus        70 ~~~~~~v~d~~~~~~~l~~~----G~~~~~~~   97 (122)
T cd07246          70 VSLHLYVEDVDATFARAVAA----GATSVMPP   97 (122)
T ss_pred             EEEEEEeCCHHHHHHHHHHC----CCeEecCc
Confidence            89999999999999999999    99999877

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.51  E-value=2.1e-07  Score=88.28  Aligned_cols=107  Identities=22%  Similarity=0.206  Sum_probs=83.8

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+++||.+.|++-..+..||+..|||++..+-+.+   +...+..+.++++  |.+.+.++++..  ...+....++-
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~le---tg~~~~~s~alr~--g~~vFv~~s~~~--p~~~~~G~~l~   86 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLE---TGSREWASHALRQ--GKIVFVFNSAYN--PDNSEYGDHLV   86 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhccccc---ccchHHHHHHhhc--CCEEEEEecCCC--CCchhhhhhhh
Confidence            5899999999999999999999999999998654322   2222334455554  667788877763  34445555666


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      + +|.|+--+||+|+|.+++.+.+.++    |..++.+|
T Consensus        87 ~-HgdgvkdvafeVeD~da~~~~~va~----Ga~v~~~p  120 (381)
T KOG0638|consen   87 K-HGDGVKDVAFEVEDADAIFQEAVAN----GAKVVRPP  120 (381)
T ss_pred             h-cccchhceEEEecchHHHHHHHHHc----CCcccCCc
Confidence            6 5788999999999999999999999    99999887

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=98.46  E-value=1e-06  Score=73.17  Aligned_cols=95  Identities=18%  Similarity=0.124  Sum_probs=57.9

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      +||+++.|.|++++++||+. |||+.......         .....+..++ .++|.|...... ....  .. .. ..+
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~---------~~~~~~~~~~-~~~l~l~~~~~~-~~~~--~~-~~-~~~   64 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD---------EPHVEAVLPG-GVRLAWDTVESI-RSFT--PG-WT-PTG   64 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC---------CCcEEEEeCC-CEEEEEEcccce-eeec--CC-CC-CCC
Confidence            68999999999999999975 99997532210         0111122222 344544322100 0000  00 00 122


Q ss_pred             CCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+-.|++|.++   ||++++++|+++    |++++..|
T Consensus        65 ~~~~~l~~~~~~~~dvd~~~~~l~~~----G~~~~~~~   98 (122)
T cd07235          65 GHRIALAFLCETPAEVDALYAELVGA----GYPGHKEP   98 (122)
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHHHHC----CCCcCCCC
Confidence            34578888875   899999999999    99988766

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.42  E-value=2e-06  Score=71.45  Aligned_cols=90  Identities=17%  Similarity=0.139  Sum_probs=60.8

Q ss_pred             EeEEEEecCCHHHHHHHHHHh---hCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          209 LDHAVGNVPELAPAVAYVKSF---TGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~---lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      |+|+.+.|.|++++++||+++   |||+...+..        .+  ...+...++...+.|.....   ...       .
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--------~~--~~~~~~~~~~~~~~l~~~~~---~~~-------~   60 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--------PG--AVGYGKGGGGPDFWVTKPFD---GEP-------A   60 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--------Cc--eeEeccCCCCceEEEecccc---CCC-------C
Confidence            589999999999999999999   6888764320        11  12233333445555544321   100       0


Q ss_pred             cCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ...+..||||.|+|   +++.+++++++    |+.+...|
T Consensus        61 -~~~~~~hi~f~v~~~~~v~~~~~~~~~~----g~~~~~~~   96 (123)
T cd07262          61 -TAGNGTHVAFAAPSREAVDAFHAAALAA----GGTDEGAP   96 (123)
T ss_pred             -CCCCceEEEEECCCHHHHHHHHHHHHHc----CCccCCCC
Confidence             12345799999987   78889999999    99988766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.41  E-value=3.2e-06  Score=70.18  Aligned_cols=93  Identities=20%  Similarity=0.258  Sum_probs=61.1

Q ss_pred             EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          213 VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       213 ~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      .+.|.|++++++||+++|||+.......+      .| +....+..+++.+.+......     .... .  ....+.+-
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~------~~~~~~~~l~~~~~~~~l~~~~~~-----~~~~-~--~~~~~~~~   69 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDD------DGGVAHAELRFGDGGVMVGSVRDD-----YRAS-S--ARAGGAGT   69 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCC------CCcEEEEEEEECCEEEEEecCCCc-----cccc-c--cccCCCce
Confidence            57789999999999999999987654321      22 222233444433333222211     1000 0  11234567


Q ss_pred             ceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          292 QHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       292 qHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .|++|.|+|+++++++++++    |++++.+|
T Consensus        70 ~~~~~~v~d~d~~~~~l~~~----G~~v~~~~   97 (122)
T cd08355          70 QGVYVVVDDVDAHYERARAA----GAEILREP   97 (122)
T ss_pred             EEEEEEECCHHHHHHHHHHC----CCEEeeCc
Confidence            89999999999999999999    99999776

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.39  E-value=8.5e-07  Score=73.56  Aligned_cols=93  Identities=17%  Similarity=0.157  Sum_probs=57.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      |+++.|+|++++++||+++|||++.....         +  ...+...+..+.+.+.....   ......  .......+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~---------~--~~~~~~~~~~~~l~~~~~~~---~~~~~~--~~~~~~~~   65 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE---------T--WVDFDFFGHQLVAHLSPNFN---ADASDN--AVDGHPVP   65 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC---------C--cccccccCcEEEEEeccCCC---cccccC--CCCCCccC
Confidence            99999999999999999999999854211         0  01111122233333322110   000000  00011235


Q ss_pred             cceEEE--EeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          291 VQHLAL--VSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       291 vqHiAf--~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..|+||  .++|+++++++|+++    |++++..|
T Consensus        66 ~~h~~~~~~~~dv~~~~~~l~~~----g~~~~~~p   96 (125)
T cd08357          66 VPHFGLILSEEEFDALAERLEAA----GVEFLIEP   96 (125)
T ss_pred             CceEEEEEeHHHHHHHHHHHHHC----CCcEecCc
Confidence            788865  669999999999999    99999876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.32  E-value=1.7e-05  Score=66.97  Aligned_cols=112  Identities=16%  Similarity=0.089  Sum_probs=74.0

Q ss_pred             EEEEe-CCHHHHHHHHHHhcCCcEEEEecCC--------CCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           36 VEFWC-TDATNTARRFSWGLGMPIVAKSDLS--------TGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        36 I~~~V-~D~~~a~~fy~~~lGF~~~~~~~~~--------~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      ..|++ .|+++|++||+++||+++......+        ....+.....++.++..|.+.......              
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~--------------   68 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGF--------------   68 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCC--------------
Confidence            35677 9999999999999999998765211        111134566677888888887642111              


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEE
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLR  174 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~  174 (389)
                            ..     ..+ +...+++.|+|   ++++++++.+.| +++.+|...+.+.....++++.|+...
T Consensus        69 ------~~-----~~~-~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~  126 (128)
T cd06588          69 ------PF-----TFG-NGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQ  126 (128)
T ss_pred             ------CC-----CCC-CCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEE
Confidence                  00     012 34468999886   888899977666 787887765444556666666666543

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.31  E-value=2e-05  Score=67.60  Aligned_cols=114  Identities=18%  Similarity=0.152  Sum_probs=80.7

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCcEEEEecCCC---------CceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           36 VEFWCT-DATNTARRFSWGLGMPIVAKSDLST---------GNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        36 I~~~V~-D~~~a~~fy~~~lGF~~~~~~~~~~---------g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      -.|.++ |.++|++||+++||++...+....+         +.+ ...+.++.++..|++.......             
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~-i~HA~l~i~g~~im~sd~~~~~-------------   69 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGR-IMHAELRIGGSTIMLSDAFPDM-------------   69 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCc-eEEEEEEECCEEEEEecCCCcc-------------
Confidence            357778 9999999999999999887654333         123 3455667888888888653211             


Q ss_pred             CCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEE
Q 016432          106 LPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRY  175 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~f  175 (389)
                             .     ... +..-..|-+.++|+|+.+++|++.|++++.++...+..-++..++++-|+.=.|
T Consensus        70 -------~-----~~~~~~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l  128 (136)
T COG2764          70 -------G-----ATEGGGTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWML  128 (136)
T ss_pred             -------C-----cccCCCeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEE
Confidence                   0     001 223446888899999999999999999999988766666666666666654433

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.26  E-value=1.3e-05  Score=66.84  Aligned_cols=92  Identities=13%  Similarity=0.190  Sum_probs=58.4

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh----
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH----  285 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~----  285 (389)
                      -++++.|.|++++++||+. |||+.......+      .+  ..+...  +...+.|....       ..+.+...    
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~------~~--~~~~~~--~~~~l~l~~~~-------~~~~~~~~~~~~   63 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE------KA--ACMVIS--DNIFVMLLTED-------FFQTFTPKPIAD   63 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCC------Ce--EEEEEC--CceEEEEEcHH-------HHhhccCCCccc
Confidence            4789999999999999986 999976433211      11  112122  23455554321       01111110    


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.+..|+||.|+   |+++++++++++    |++++.+|
T Consensus        64 ~~~~~~~~l~f~v~~~~~vd~~~~~l~~~----G~~i~~~p  100 (124)
T cd09012          64 TKKSTEVLISLSADSREEVDELVEKALAA----GGKEFREP  100 (124)
T ss_pred             CCCCCeEEEEEeCCCHHHHHHHHHHHHHC----CCcccCCc
Confidence            12334679999998   588999999999    99998866

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.24  E-value=6.7e-06  Score=68.20  Aligned_cols=92  Identities=14%  Similarity=0.169  Sum_probs=57.7

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      ++.|+.+.|.|++++++||+++|||++......          . ....   +.+.|.+............      ...
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~----------~-~~~~---~~~~l~~~~~~~~~~~~~~------~~~   61 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFGE----------N-VTFE---GGFALQEGYSWLEGISKAD------IIE   61 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccCc----------e-EEEe---ccceeccchhhhccCCccc------ccc
Confidence            578999999999999999999999998643210          0 1111   1122211100000000000      012


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCc-eecCCC
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGF-EFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv-~~l~~P  323 (389)
                      +.+-.|++|.|+||++++++|+++    |. +++..|
T Consensus        62 ~~~~~~l~~~v~dvd~~~~~l~~~----g~~~~~~~~   94 (120)
T cd09011          62 KSNNFELYFEEEDFDAFLDKLKRY----DNIEYVHPI   94 (120)
T ss_pred             cCCceEEEEEehhhHHHHHHHHhc----CCcEEecCc
Confidence            334579999999999999999999    85 787766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.24  E-value=2.3e-05  Score=66.24  Aligned_cols=114  Identities=18%  Similarity=0.105  Sum_probs=78.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC---EEEEEEccCCCCCccccccCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD---LRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~---~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      ..+.|.++.|+|+++|.+||.++||.+.....++. +.   ....+..++   .-++...+..+                
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~-~~---~y~~f~~~~~~~gG~l~~~~~~~----------------   67 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMG-EM---RYAVFPADGAGAGGGLMARPGSP----------------   67 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCC-Cc---eEEEEECCCccccceeccCCcCC----------------
Confidence            45789999999999999999999999988765431 11   233333222   11111111000                


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   .+.+--.+=|.|+|+|++.+|++++|.+++.+++..++...++.+.++.|..+-|.+
T Consensus        68 -------------p~~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s  124 (127)
T COG3324          68 -------------PGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWS  124 (127)
T ss_pred             -------------CCCCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEee
Confidence                         112333577889999999999999999999999887666667777777777776654

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.23  E-value=7.8e-06  Score=67.52  Aligned_cols=77  Identities=12%  Similarity=0.040  Sum_probs=51.4

Q ss_pred             EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcc
Q 016432          213 VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQ  292 (389)
Q Consensus       213 ~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gvq  292 (389)
                      .+.|.|++++++||++ |||++.+...         .  ...+..  +...+.|....   ...           ..+-.
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~---------~--~~~l~~--~~~~l~l~~~~---~~~-----------~~~~~   57 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWEND---------N--LAYFRL--GNCAFYLQDYY---VKD-----------WAENS   57 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEecCC---------C--EEEEEc--CCEEEEeecCC---Ccc-----------cccCC
Confidence            4567899999999987 9999976421         1  133333  33444443221   010           11235


Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCCCceecC
Q 016432          293 HLALVSEDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       293 HiAf~vdDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      |++|.|+||++++++|+++    |+++..
T Consensus        58 ~~~~~v~did~~~~~l~~~----G~~~~~   82 (113)
T cd08356          58 MLHLEVDDLEAYYEHIKAL----GLPKKF   82 (113)
T ss_pred             EEEEEECCHHHHHHHHHHc----CCcccc
Confidence            8999999999999999999    997643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.22  E-value=9.5e-06  Score=66.38  Aligned_cols=110  Identities=15%  Similarity=0.197  Sum_probs=69.4

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      +.+.|.|++++++||+++|||++....         .+  ...+..++ ...+.+-....   ....    .  ....|.
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~---------~~--~~~~~~~~-~~~~~l~~~~~---~~~~----~--~~~~~~   60 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS---------PT--FALFVLGS-GVKLGLWSRHT---VEPA----S--DATGGG   60 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC---------Cc--eEEEEeCC-CcEEEEeeccc---cCCC----C--CCCCCc
Confidence            578899999999999999999976421         11  12222222 24455533321   0000    0  123467


Q ss_pred             ceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEec
Q 016432          292 QHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFT  367 (389)
Q Consensus       292 qHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift  367 (389)
                      +|++|.++|   ++++++++++.    |+++...| ..        .+       .-  +   .++=+|.+|..+.+|+
T Consensus        61 ~~~~~~v~~~~~~~~~~~~~~~~----g~~v~~~~-~~--------~~-------~g--~---~~~~~DPdGn~ie~~~  114 (114)
T cd07261          61 SELAFMVDDGAAVDALYAEWQAK----GVKIIQEP-TE--------MD-------FG--Y---TFVALDPDGHRLRVFA  114 (114)
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHC----CCeEecCc-cc--------cC-------Cc--c---EEEEECCCCCEEEeeC
Confidence            999999976   88999999999    99988776 32        01       00  1   1244667888888875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.13  E-value=4.4e-06  Score=74.69  Aligned_cols=98  Identities=21%  Similarity=0.225  Sum_probs=53.9

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH---hh
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL---EH  285 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl---~~  285 (389)
                      |||+++.|+|+++++++|++.|||++......+     ..|.....+..+++  .|+|...... .......++.   ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~-----~~GT~N~li~f~~~--YlEli~i~~~-~~~~~~~~~~~~~~~   72 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHP-----GWGTANALIPFGDG--YLELIAIDPE-APAPDRGRWFGLDRL   72 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-T-----TT-EEEEEEE-SSS--EEEEEEES-H-HHSTGGGT-TTTHHH
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCC-----CCccEEEEEeeCCc--eEEEEEeCCc-ccccccccceechhh
Confidence            799999999999999999889999998654321     23555566655555  5666544211 1111111111   11


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCce
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE  318 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~  318 (389)
                      ..++|+.++||.|+|+.++.++|++.    |++
T Consensus        73 ~~~~g~~~~~l~t~d~~~~~~~l~~~----G~~  101 (175)
T PF13468_consen   73 AGGEGLYGWALRTDDIEAVAARLRAA----GLD  101 (175)
T ss_dssp             HT--EEEEEEEE-S-HHHHHHHHHTT----T-E
T ss_pred             cCCCCeEEEEEecCCHHHHHHHHHhc----CCC
Confidence            25789999999999999999999999    986

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=98.09  E-value=3.7e-05  Score=62.22  Aligned_cols=85  Identities=16%  Similarity=0.165  Sum_probs=58.3

Q ss_pred             EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcc
Q 016432          213 VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQ  292 (389)
Q Consensus       213 ~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gvq  292 (389)
                      .+.|+|++++++||+++|||+......        .. ...++..  +...+.|.....   ....        ...+..
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--------~~-~~~~~~~--~~~~~~l~~~~~---~~~~--------~~~~~~   60 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--------EP-GYAFLSR--GGAQLMLSEHDG---DEPV--------PLGRGG   60 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--------CC-cEEEEEe--CCEEEEEeccCC---CCCC--------CCCCcE
Confidence            478899999999999999999875432        01 2233333  345566654431   1100        234566


Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCCCce-ecCCC
Q 016432          293 HLALVSEDIFRTLREMRKRSGVGGFE-FMPSP  323 (389)
Q Consensus       293 HiAf~vdDI~~a~~~l~~~~~~~Gv~-~l~~P  323 (389)
                      |++|.++|++++.+++++.    |++ ...+|
T Consensus        61 ~~~~~~~~~~~~~~~l~~~----G~~~~~~~~   88 (112)
T cd08349          61 SVYIEVEDVDALYAELKAK----GADLIVYPP   88 (112)
T ss_pred             EEEEEeCCHHHHHHHHHHc----CCcceecCc
Confidence            9999999999999999999    998 44444

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.07  E-value=8.9e-06  Score=66.84  Aligned_cols=116  Identities=16%  Similarity=0.135  Sum_probs=66.4

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      |.+.|.|++++.+||+++|||++... ..       .+  ..++..  +...+.+...... ..  ... ......+.+-
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~~-------~~--~~~~~~--~~~~~~l~~~~~~-~~--~~~-~~~~~~~~~~   65 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-SN-------DG--VAFFQL--GGLVLALFPREEL-AK--DAG-VPVPPPGFSG   65 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-CC-------Cc--eEEEEc--CCeEEEEecchhh-hh--hcC-CCCCCCCccc
Confidence            67899999999999999999998644 10       11  123333  2344544322100 00  000 0000011223


Q ss_pred             ceEEE---EeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEec
Q 016432          292 QHLAL---VSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFT  367 (389)
Q Consensus       292 qHiAf---~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift  367 (389)
                      .|++|   .++|+.++++++++.    |++++.+| ...+.      +             ....+=+|.+|+++.+++
T Consensus        66 ~~~~~~~~~~~d~~~~~~~l~~~----G~~~~~~~-~~~~~------g-------------~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          66 ITLAHNVRSEEEVDAVLARAAAA----GATIVKPP-QDVFW------G-------------GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             eEEEEEcCCHHHHHHHHHHHHhC----CCEEecCC-ccCCC------C-------------ceEEEEECCCCCEEEEee
Confidence            34554   457899999999999    99998766 32110      0             011244667888988876

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.07  E-value=6.6e-06  Score=70.79  Aligned_cols=99  Identities=16%  Similarity=0.233  Sum_probs=74.3

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +.++.++|||-+.+++-++...|+ +.|||+...+....         .+.+++  .|.|+|.||...     .+.+.+|
T Consensus         4 P~g~~G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hrsk---------~v~l~r--QG~I~~vln~ep-----~s~a~~~   66 (139)
T PF14696_consen    4 PLGLDGFDFVEFAVPDAQALAQLF-TALGFQPVARHRSK---------DVTLYR--QGDINFVLNSEP-----DSFAAEF   66 (139)
T ss_dssp             TT-EEEEEEEEEE-SSTTSCHHHH-CCCCEEEECCECCC---------SEEEEE--ETTEEEEEEEES-----TSCHHHH
T ss_pred             CCCCCCeEEEEEecCCHHHHHHHH-HHhCcceEEecCCc---------ceEEEE--eCCEEEEEeCCC-----cchHHHH
Confidence            457999999999999876667777 57999987654321         123333  378999998754     4688889


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ... +|+|+-=|||+|+|..+++++..++    |.+.+..|
T Consensus        67 ~~~-HG~sv~aiafrV~Da~~A~~rA~~~----GA~~~~~~  102 (139)
T PF14696_consen   67 AAQ-HGPSVCAIAFRVDDAAAAYERAVAL----GAEPVQEP  102 (139)
T ss_dssp             HHH-HSSEEEEEEEEES-HHHHHHHHHHT----T--EEEEE
T ss_pred             HHh-cCCEEEEEEEEeCCHHHHHHHHHHc----CCcCcccC
Confidence            988 5899999999999999999999999    99888766

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=98.04  E-value=1.3e-05  Score=64.75  Aligned_cols=85  Identities=18%  Similarity=0.192  Sum_probs=55.2

Q ss_pred             EecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcce
Q 016432          214 GNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQH  293 (389)
Q Consensus       214 ~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqH  293 (389)
                      |.|+|++++++||+++|||++......      ...+.. -.....+...+....+..              ....+..|
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~--------------~~~~~~~~   59 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPD------YVDFSL-GFRFHDGVIEFLQFPDPP--------------GPPGGGFH   59 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETS------EEEEEE-TEEEEEEEEEEEEEESSS--------------SSSSSEEE
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCC------eEEEEe-ccchhhhhHHHccCCccc--------------cCCCceeE
Confidence            578999999999999999999873221      011110 000001111111111110              12457899


Q ss_pred             EEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          294 LALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       294 iAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ++|.|+|+++++++++++    |++++..|
T Consensus        60 ~~~~v~dv~~~~~~l~~~----G~~~~~~~   85 (108)
T PF12681_consen   60 LCFEVEDVDALYERLKEL----GAEIVTEP   85 (108)
T ss_dssp             EEEEESHHHHHHHHHHHT----TSEEEEEE
T ss_pred             EEEEEcCHHHHHHHHHHC----CCeEeeCC
Confidence            999999999999999999    99998877

...

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=97.80  E-value=0.0002  Score=59.32  Aligned_cols=79  Identities=15%  Similarity=0.063  Sum_probs=52.6

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      ..+.|.|++++++||++ |||+..+...         . ....+..++  ..|.|.....   ..          ....-
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~---------~-~~~~~~~~~--~~l~l~~~~~---~~----------~~~~~   59 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQA---------A-GYMILRRGD--LELHFFAHPD---LD----------PATSP   59 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCC---------C-CEEEEEcCC--EEEEEEecCc---CC----------CCCCc
Confidence            46788999999999999 9999875421         1 123333332  3444432210   00          11123


Q ss_pred             ceEEEEeCCHHHHHHHHHHhcCCCCceec
Q 016432          292 QHLALVSEDIFRTLREMRKRSGVGGFEFM  320 (389)
Q Consensus       292 qHiAf~vdDI~~a~~~l~~~~~~~Gv~~l  320 (389)
                      -|++|.|+||++++++|+++    |+.+.
T Consensus        60 ~~~~~~v~dvd~~~~~l~~~----G~~~~   84 (120)
T cd08350          60 FGCCLRLPDVAALHAEFRAA----GLPET   84 (120)
T ss_pred             ceEEEEeCCHHHHHHHHHHh----Ccccc
Confidence            58999999999999999999    99754

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=97.78  E-value=0.00049  Score=56.43  Aligned_cols=118  Identities=16%  Similarity=0.065  Sum_probs=69.9

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      +=|+++-|.|++++.+||.++||.+.-...+     .|+..-++. -.+..-+.-  .+++.....-++....+|.    
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd-----~wvdfDfyG-HQ~v~Hl~~--q~~~~~~g~V~~~~v~~pH----   72 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD-----TWVDFDFYG-HQVVAHLTP--QPDSQGSGKVDGHGVPPPH----   72 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc-----eEEEeeecc-cEEEEEecC--CcccccCcccCCCCCCCcc----
Confidence            5699999999999999999999998653322     233333321 123333322  2221100001122222222    


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeecc----CceEEEEEEecCCeEEEE
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILD----NLAVIAEVQLYGDVVLRY  175 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~----~~~~~~~v~~~gg~~~~f  175 (389)
                                   ..+.|.++|--+..+|+.++|+....+|....    ++.+...+.+|.|..++|
T Consensus        73 -------------fGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEf  126 (138)
T COG3565          73 -------------FGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEF  126 (138)
T ss_pred             -------------ceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeee
Confidence                         23678899999999999999999888886532    234455555555554444

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=97.58  E-value=0.0003  Score=57.32  Aligned_cols=33  Identities=21%  Similarity=0.278  Sum_probs=30.2

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEec
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSD   63 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~   63 (389)
                      ++++||.+.|+|++++++||.+.|||+.+....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   33 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTV   33 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecc
Confidence            468999999999999999999999999988754

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=97.51  E-value=0.0012  Score=55.05  Aligned_cols=116  Identities=13%  Similarity=0.160  Sum_probs=77.9

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      +.-+|-|-|+|++++.+||+ .|||+.-..--.     ..+..++..+++.++|.+..                      
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~-alGfk~Npq~sd-----e~a~~mi~~~ni~vMLL~~~----------------------   54 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYT-ALGFKFNPQFSD-----EDAACMIISDNIFVMLLEEA----------------------   54 (133)
T ss_pred             eEEEEecchhhHHHHHHHHH-HhCcccCCCccc-----ccceeEEEeccEEEEEeccH----------------------
Confidence            44578899999999999998 799986543211     12355666788877776531                      


Q ss_pred             HHHHHHHHh-----cCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAAS-----HGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~-----hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                       ..+.|.++     ....=.-|||.+.   +||..++++.+.|.++..+|... +..=...+.+++|++.+|+-
T Consensus        55 -~fq~F~~~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~-gfMYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          55 -RFQTFTKRQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDE-GFMYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             -HhhhhcccccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCcccc-ccccceeeeCCCCCeEEEEE
Confidence             22233211     1122234788877   69999999999999998887763 22223456689999888764

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=97.28  E-value=0.0028  Score=53.60  Aligned_cols=93  Identities=17%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC-cceEEEeccCCCCCCCCchHHHHHh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND-EMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~-g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ...+-|.-+.+.|++++.+||+++||++.....+..       +....+..... +.--+....+.              
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~-------~~~y~~f~~~~~~~gG~l~~~~~--------------   65 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMG-------EMRYAVFPADGAGAGGGLMARPG--------------   65 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCC-------CceEEEEECCCccccceeccCCc--------------
Confidence            345779999999999999999999999987665421       12222222111 00000000000              


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .-.+.+-.+|=|.|+||++++++..++    |-+++.+|
T Consensus        66 ~~p~~~~~~iy~~v~did~~l~rv~~~----GG~V~~p~  100 (127)
T COG3324          66 SPPGGGGWVIYFAVDDIDATLERVVAA----GGKVLRPK  100 (127)
T ss_pred             CCCCCCCEEEEEecCChHHHHHHHHhc----CCeEEecc
Confidence            001234567788899999999999999    88888876

>PRK10148 hypothetical protein; Provisional

Probab=97.28  E-value=0.011  Score=51.48  Aligned_cols=112  Identities=12%  Similarity=0.065  Sum_probs=69.9

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCcEEEEec---C-----------C-----CCceeEEEEEEEcCCEEEEEEccCCCCCcc
Q 016432           36 VEFWCT-DATNTARRFSWGLGMPIVAKSD---L-----------S-----TGNTVHASYLLRSGDLRFVFTAPYSPSISD   95 (389)
Q Consensus        36 I~~~V~-D~~~a~~fy~~~lGF~~~~~~~---~-----------~-----~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~   95 (389)
                      ..|..+ |.++|++||+++||.++.....   .           +     ...+ .....++.|+..|.+.... +.   
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~Ha~l~i~g~~lm~sD~~-~~---   79 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTA-IAHANVRIAGSDIMMSDAI-PS---   79 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCc-EEEEEEEECCEEEEEECCC-CC---
Confidence            355664 8999999999999998865421   1           0     0122 3456667788888776521 11   


Q ss_pred             ccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHH--HHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEE
Q 016432           96 AADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADV--AFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVL  173 (389)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda--~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~  173 (389)
                                       .     ...+ .-..+++.++|+++  .+-++.+.|++++.++...+...++..|+++=|+.-
T Consensus        80 -----------------~-----~~~~-~~~~l~l~~~d~ee~~~~~~aLa~gg~v~mpl~~~~wg~~~g~v~D~fGi~W  136 (147)
T PRK10148         80 -----------------G-----KAHY-SGFTLVLDTQDVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPW  136 (147)
T ss_pred             -----------------c-----CCCC-CeEEEEEECCCHHHHHHHHHHhhCCCEEEecchhcchhhccEEEECCCCCEE
Confidence                             0     0012 23468888889877  333355799999888877655555666665555544


Q ss_pred             EE
Q 016432          174 RY  175 (389)
Q Consensus       174 ~f  175 (389)
                      .|
T Consensus       137 ~l  138 (147)
T PRK10148        137 MI  138 (147)
T ss_pred             EE
Confidence            33

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.21  E-value=0.0024  Score=58.94  Aligned_cols=119  Identities=16%  Similarity=0.144  Sum_probs=76.9

Q ss_pred             cCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccc
Q 016432           21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        21 ~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~   98 (389)
                      ..|.|++     +-.|.+.|.|++++++||.+.||+++.....-.      ...++.  -+...++|+....+.      
T Consensus       143 ~~p~s~p-----v~~V~l~VgdL~ks~kyw~~~lgM~ilekeek~------t~~~mgYgd~q~~LElt~~~~~i------  205 (299)
T KOG2943|consen  143 RGPQSDP-----VLQVMLNVGDLQKSIKYWEKLLGMKILEKEEKY------TRARMGYGDEQCVLELTYNYDVI------  205 (299)
T ss_pred             cCCCCCC-----eEEEEEEehhHHHHHHHHHHHhCcchhhhhhhh------hhhhhccCCcceEEEEEeccCcc------
Confidence            3555544     678999999999999999999999988643211      122222  345777777543221      


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhcCCceeEEEEE--EcCHHHHHHHHHHCCCcccCCCeecc----CceEEEEEEecCCeE
Q 016432           99 AGNSSASLPTFDHAACRSFAASHGLAARSIAVE--VEDADVAFNTSVAHGAKPSSPPVILD----NLAVIAEVQLYGDVV  172 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~--V~Dvda~~~~a~a~Ga~~i~~P~~~~----~~~~~~~v~~~gg~~  172 (389)
                                           .+..|-..|+|.  .+|+...-+..+..+-+++.+-+...    ....+..+.+|+|+.
T Consensus       206 ---------------------d~~kg~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDghe  264 (299)
T KOG2943|consen  206 ---------------------DRAKGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHE  264 (299)
T ss_pred             ---------------------cccccceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCce
Confidence                                 122233345554  55787777777877666555433321    235567777999999


Q ss_pred             EEEee
Q 016432          173 LRYVS  177 (389)
Q Consensus       173 ~~fve  177 (389)
                      +-||+
T Consensus       265 icfVd  269 (299)
T KOG2943|consen  265 ICFVD  269 (299)
T ss_pred             EEEec
Confidence            99998

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=96.97  E-value=0.0066  Score=57.28  Aligned_cols=90  Identities=20%  Similarity=0.292  Sum_probs=61.1

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      -..++-++++|+|+++...||++++|+++..+.+           .++++... +...|.|.+.... ...       . 
T Consensus         8 ~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~-----------~~v~L~vg-g~~LL~L~q~~~a-~~~-------~-   66 (265)
T COG2514           8 PTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD-----------GSVTLGVG-GTPLLTLEQFPDA-RRP-------P-   66 (265)
T ss_pred             CcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC-----------ceEEEeeC-CEEEEEEEeCCCC-CCC-------C-
Confidence            4678899999999999999999999999986532           23444433 3344555432211 111       0 


Q ss_pred             cCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceec
Q 016432          286 NEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFM  320 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l  320 (389)
                      .+..|+=|+||.+++   +-+.+.++...    |+.+.
T Consensus        67 ~~~aGLyH~AfLlP~r~~L~~~l~hl~~~----~~~l~  100 (265)
T COG2514          67 PRAAGLYHTAFLLPTREDLARVLNHLAEE----GIPLV  100 (265)
T ss_pred             ccccceeeeeeecCCHHHHHHHHHHHHhc----CCccc
Confidence            245799999999986   55667777777    77554

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=96.90  E-value=0.0065  Score=59.64  Aligned_cols=104  Identities=11%  Similarity=0.006  Sum_probs=68.1

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      ..-||.+.|+|++++.+||+..|||.+ ...+    .   ...+  ...+..++....  +.                  
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde----~---a~cm--~dtI~vMllt~~--D~------------------  296 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD----K---LFLL--GKTSLYLQQTKA--EK------------------  296 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC----c---cccc--cCcEEEEEecCC--CC------------------
Confidence            345999999999999999999999986 3322    1   1222  334444443321  11                  


Q ss_pred             HHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          112 AACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                               +...-.-+|+.++   +||+.+++|+++|.+...+|... +.  .-.+.+++|+.-+++-
T Consensus       297 ---------~~~~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~-Gf--~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        297 ---------KNRGTTTLSLELECEHDFVRFLRRWEMLGGELGEQADGH-FP--LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             ---------CCcceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcccc-cC--cceeECCCCCEEEEEE
Confidence                     1113344888888   59999999999999876666553 22  3345678888776653

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=96.76  E-value=0.031  Score=46.89  Aligned_cols=92  Identities=11%  Similarity=-0.021  Sum_probs=54.3

Q ss_pred             Eec-CCHHHHHHHHHHhhCCeEeEEEeccccc----ccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          214 GNV-PELAPAVAYVKSFTGFHEFAEFTAEDVG----TSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       214 ~~V-~dl~~~~~fY~~~lGf~~~~~~~~~d~~----~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +.+ .|.+++++||+++||+++......++..    ....| +....+...+  ..|.+......   ...        .
T Consensus         5 L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~~l~~~d~~~~---~~~--------~   71 (128)
T cd06588           5 LWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG--QRLMASDGGPG---FPF--------T   71 (128)
T ss_pred             EeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC--EEEEEEcCCCC---CCC--------C
Confidence            556 7999999999999999988765432110    01123 2222333322  34555443311   100        1


Q ss_pred             CCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      +.+-.++++.|+|   +++.+++|.+.    | +.+.+|
T Consensus        72 ~~~~~~l~i~~~~~e~v~~~~~~l~~~----g-~~~~~~  105 (128)
T cd06588          72 FGNGISLSVECDSEEEADRLFEALSEG----G-TVLMPL  105 (128)
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHhcC----C-eEeccc
Confidence            2234589999986   77788888777    7 666665

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=96.67  E-value=0.0069  Score=49.81  Aligned_cols=94  Identities=17%  Similarity=0.171  Sum_probs=58.0

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      +=|+++-|.|++++..||.++||.....+.+.           ++-.-.-...+.+.+.-+... .+.+.    ++. .+
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~-----------wvdfDfyGHQ~v~Hl~~q~~~-~~~g~----V~~-~~   67 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT-----------WVDFDFYGHQVVAHLTPQPDS-QGSGK----VDG-HG   67 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccce-----------EEEeeecccEEEEEecCCccc-ccCcc----cCC-CC
Confidence            44999999999999999999999987644221           111111112233333211100 11111    111 22


Q ss_pred             CCcceEE--EEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLA--LVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiA--f~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      --+-|+.  |.++|-.+..++|.++    |+.|.-+|
T Consensus        68 v~~pHfGvVl~~edW~alaerlea~----gi~~~i~P  100 (138)
T COG3565          68 VPPPHFGVVLPVEDWFALAERLEAA----GIPFHIPP  100 (138)
T ss_pred             CCCccceEEEEHHHHHHHHHHHHHc----CCCcccCc
Confidence            2256754  6779999999999999    99999888

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=96.64  E-value=0.002  Score=52.35  Aligned_cols=32  Identities=16%  Similarity=0.371  Sum_probs=29.4

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEe
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFT  239 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~  239 (389)
                      +++|+++.|+|++++++||+++|||+......
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   33 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTV   33 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecc
Confidence            68999999999999999999999999987654

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=95.57  E-value=0.19  Score=41.90  Aligned_cols=106  Identities=16%  Similarity=0.102  Sum_probs=59.0

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      -+-.+.|.|-+..++||++.|||+.......      ..+.--+++.-.|+|-+..+..+                  ..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEna------~a~lg~~~~~erlvlEESP~~rt------------------r~   57 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEENA------LAILGDQQKEERLVLEESPSMRT------------------RA   57 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEETT------EEEEE-TT--EEEEEEE--TTT-------------------B-
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeecccc------EEEecCCCCceEEEEecCCcccc------------------cc
Confidence            3567899999999999999999999987642      12222246677888876422110                  01


Q ss_pred             HHHHHHhcCC-ceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCe
Q 016432          114 CRSFAASHGL-AARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDV  171 (389)
Q Consensus       114 ~~~~l~~hg~-gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~  171 (389)
                      +      .|+ =+..|-+.|++.+.. +.+.++|++. ...-...+++.+-.+.+-|+.
T Consensus        58 V------~G~KKl~~ivIkv~~~~EI-e~LLar~~~~-~~l~kg~~gyAfe~vSPEgd~  108 (125)
T PF14506_consen   58 V------EGPKKLNRIVIKVPNPKEI-EALLARGAQY-DRLYKGKNGYAFEAVSPEGDR  108 (125)
T ss_dssp             -------SSS-SEEEEEEEESSHHHH-HHHHHC-S---SEEEE-SSSEEEEEE-TT--E
T ss_pred             c------cCcceeeEEEEEcCCHHHH-HHHHhccccc-ceeEEcCCceEEEEECCCCCE
Confidence            1      232 478899999998776 7788888764 222222334555555433333

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.26  E-value=0.13  Score=44.10  Aligned_cols=100  Identities=15%  Similarity=0.148  Sum_probs=57.4

Q ss_pred             EecC-CHHHHHHHHHHhhCCeEeEEEeccccc-c---cccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          214 GNVP-ELAPAVAYVKSFTGFHEFAEFTAEDVG-T---SESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       214 ~~V~-dl~~~~~fY~~~lGf~~~~~~~~~d~~-~---~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      +++. +-++|+.||+++||++........+.. .   ...| +...-+.-.  ...|.+....+.  ..      .. ..
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~--g~~im~sd~~~~--~~------~~-~~   74 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG--GSTIMLSDAFPD--MG------AT-EG   74 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC--CEEEEEecCCCc--cC------cc-cC
Confidence            4566 899999999999999987765543310 0   0112 111111111  223344333211  11      11 11


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhh
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYY  328 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY  328 (389)
                      +.--.=|-+.++|+++..+++.+.    |++.+.++-++||
T Consensus        75 ~~~s~~l~~~~~d~da~f~~a~~a----Ga~v~mpl~~~fw  111 (136)
T COG2764          75 GGTSLSLDLYVEDVDAVFERAAAA----GATVVMPLEDTFW  111 (136)
T ss_pred             CCeeEEEEEEehHHHHHHHHHHhc----CCeEEecchhcCc
Confidence            222466778889999999999999    9887776634444

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=91.37  E-value=1.5  Score=36.73  Aligned_cols=80  Identities=15%  Similarity=0.218  Sum_probs=48.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC-
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA-  289 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~-  289 (389)
                      +=++.|.+.+..++||+++|||++..+-.         .+  .++....+.-+|.|-|++.   ..+.      .-.|+ 
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn---------a~--a~lg~~~~~erlvlEESP~---~rtr------~V~G~K   62 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN---------AL--AILGDQQKEERLVLEESPS---MRTR------AVEGPK   62 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET---------TE--EEEE-TT--EEEEEEE--T---TT-B--------SSS-
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc---------cE--EEecCCCCceEEEEecCCc---cccc------cccCcc
Confidence            44788999999999999999999875422         22  3344456677888888862   2221      11233 


Q ss_pred             CcceEEEEeCCHHHHHHHHHHh
Q 016432          290 GVQHLALVSEDIFRTLREMRKR  311 (389)
Q Consensus       290 GvqHiAf~vdDI~~a~~~l~~~  311 (389)
                      -+++|-+.|+|-. -++.|-++
T Consensus        63 Kl~~ivIkv~~~~-EIe~LLar   83 (125)
T PF14506_consen   63 KLNRIVIKVPNPK-EIEALLAR   83 (125)
T ss_dssp             SEEEEEEEESSHH-HHHHHHHC
T ss_pred             eeeEEEEEcCCHH-HHHHHHhc
Confidence            4999999999853 35556666

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=88.32  E-value=7.1  Score=32.36  Aligned_cols=83  Identities=18%  Similarity=0.219  Sum_probs=49.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEE-EEecCCC-----CceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIV-AKSDLST-----GNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~-~~~~~~~-----g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      |+-|. .+.++|+.||.++||-..+ .....++     ..+ .....+..++..|...... +.                
T Consensus         6 yL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~-v~ha~l~i~g~~lm~~D~~-~~----------------   66 (116)
T PF06983_consen    6 YLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDK-VMHAELTIGGQKLMASDGG-PD----------------   66 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTS-EEEEEEEETTEEEEEEEES-TS----------------
T ss_pred             EEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCc-EEEEEEEECCeEEEEECCC-CC----------------
Confidence            44443 7899999999999995433 2222211     122 3345567788888766532 11                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCC
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGA  147 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga  147 (389)
                      +   .       .+++ ..+++.++|   +++.+++|.+.|-
T Consensus        67 ~---~-------~~~~-~sl~i~~~~~ee~~~~f~~Ls~gG~   97 (116)
T PF06983_consen   67 F---P-------FGNN-ISLCIECDDEEEIDRIFDKLSEGGQ   97 (116)
T ss_dssp             --------------TT-EEEEEEESSHHHHHHHHHHHHTTTE
T ss_pred             C---C-------CCCc-EEEEEEcCCHHHHHHHHHHHHcCCC
Confidence            0   0       1234 468888886   7778888888775

>PF07063 DUF1338: Domain of unknown function (DUF1338); InterPro: IPR009770 This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function

Probab=85.49  E-value=1.9  Score=42.01  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=29.7

Q ss_pred             CchHHHHHhhcCCCCcceEEEEe------CCHHHHHHHHHHhcCCCCceec
Q 016432          276 KSQIQTYLEHNEGAGVQHLALVS------EDIFRTLREMRKRSGVGGFEFM  320 (389)
Q Consensus       276 ~s~i~~fl~~~~g~GvqHiAf~v------dDI~~a~~~l~~~~~~~Gv~~l  320 (389)
                      .|+...++.. .|..++|+...|      .||++..+.|+++    |++.-
T Consensus       171 eSe~aAWi~~-~G~~~NH~T~~v~~l~~~~dI~~v~~~l~~~----G~~~n  216 (302)
T PF07063_consen  171 ESEYAAWIAA-HGYHINHFTPRVNRLKKFLDIDAVNAFLKER----GIPMN  216 (302)
T ss_dssp             H-HHHHHHHH-HTCS-SEEEEETTT-TT-S-HHHHHHHHHHT----T--B-
T ss_pred             HhHHHHhhcc-cccccceeeceeecccccccHHHHHHHHHHc----CCCcc
Confidence            4566777777 678899999999      9999999999999    99655

The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal hydrolase (information derived from TOPSAN for PDB:3iuz).; PDB: 3LHO_A 3IUZ_A 2RJB_C.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=83.32  E-value=5.7  Score=33.49  Aligned_cols=91  Identities=15%  Similarity=0.249  Sum_probs=52.1

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh----hc
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE----HN  286 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~----~~  286 (389)
                      -|.+-|.|++++.+||.. |||+.-..+.+++.        +..+.+  +.+-+.|.+-.       ..+.|..    ..
T Consensus         6 FvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a--------~~mi~~--~ni~vMLL~~~-------~fq~F~~~~i~dt   67 (133)
T COG3607           6 FVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDA--------ACMIIS--DNIFVMLLEEA-------RFQTFTKRQIADT   67 (133)
T ss_pred             EEecchhhHHHHHHHHHH-hCcccCCCcccccc--------eeEEEe--ccEEEEEeccH-------Hhhhhcccccccc
Confidence            356666799999999996 99998776654431        222222  22322332221       1111210    01


Q ss_pred             CCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          287 EGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       287 ~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.=-=|||.+.   ++++.+++..+.    |-....+|
T Consensus        68 ~~s~evli~ls~~s~eevd~~v~ka~ea----GGk~~~~~  103 (133)
T COG3607          68 TKSREVLISLSAGSREEVDELVDKALEA----GGKPANEP  103 (133)
T ss_pred             cCCceEEEEeccCcHHHHHHHHHHHHHc----CCCCCCCc
Confidence            1222345777775   488889999999    87776655

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=82.94  E-value=5.1  Score=39.73  Aligned_cols=27  Identities=19%  Similarity=0.187  Sum_probs=24.3

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeE
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHE  234 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~  234 (389)
                      ..-||++.|.|++++.+||+.+|||..
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC
Confidence            455999999999999999999998885

>PRK10148 hypothetical protein; Provisional

Probab=81.98  E-value=23  Score=30.52  Aligned_cols=25  Identities=20%  Similarity=0.172  Sum_probs=20.1

Q ss_pred             Eec-CCHHHHHHHHHHhhCCeEeEEE
Q 016432          214 GNV-PELAPAVAYVKSFTGFHEFAEF  238 (389)
Q Consensus       214 ~~V-~dl~~~~~fY~~~lGf~~~~~~  238 (389)
                      +++ .+.++|++||+++||.+.....
T Consensus         7 L~f~g~a~eAi~FY~~~Fgae~~~~~   32 (147)
T PRK10148          7 LSFAGNCADAIAYYQQTLGAELLYKI   32 (147)
T ss_pred             EEeCCCHHHHHHHHHHHhCCEEEEEE
Confidence            444 4899999999999999876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	389
1sp9_A	445	4-hydroxyphenylpyruvate Dioxygenase Length = 445		1e-168
1sqd_A	424	Structural Basis For Inhibitor Selectivity Revealed		1e-168
1sp8_A	418	4-hydroxyphenylpyruvate Dioxygenase Length = 418		1e-120
3isq_A	393	Crystal Structure Of Human 4-Hydroxyphenylpyruvate		3e-46
1sqi_A	393	Structural Basis For Inhibitor Selectivity Revealed		8e-45
1t47_A	381	Structure Of Fe2-Hppd Bound To Ntbc Length = 381		8e-41
1cjx_A	357	Crystal Structure Of Pseudomonas Fluorescens Hppd L		6e-19
2r5v_A	357	Hydroxymandelate Synthase Crystal Structure Length		5e-15

>pdb|1SP9|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase Length = 445

Iteration: 1
 Score =  587 bits (1512), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 272/364 (74%), Positives = 311/364 (85%), Gaps = 1/364 (0%)
Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 25  KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 84
Query: 71  HASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSP              +P+FDH +CRSF +SHGL  R++A+
Sbjct: 85  HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 144
Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK-DKANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 145 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 204
Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 205 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 264
Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 265 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 324
Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 325 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 384
Query: 370 VGDR 373
           +GDR
Sbjct: 385 LGDR 388

>pdb|1SQD|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By Crystal Structures Of Plant And Mammalian 4- Hydroxyphenylpyruvate Dioxygenases Length = 424

Iteration: 1
 Score =  586 bits (1511), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 272/364 (74%), Positives = 311/364 (85%), Gaps = 1/364 (0%)
Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 4   KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 63
Query: 71  HASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSP              +P+FDH +CRSF +SHGL  R++A+
Sbjct: 64  HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 123
Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK-DKANHLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 124 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 183
Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 184 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 243
Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 244 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 303
Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 304 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 363
Query: 370 VGDR 373
           +GDR
Sbjct: 364 LGDR 367

>pdb|1SP8|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase Length = 418

Iteration: 1
 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/379 (61%), Positives = 273/379 (72%), Gaps = 8/379 (2%)
Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           +LVG +NFVR NP+SDRF    FHHVE WC DA + A RFS+GLG P+ A+SDLSTGN+ 
Sbjct: 10  RLVGHRNFVRFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSA 69
Query: 71  HASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAV 130
           HAS LLRSG L F+FTAPY+               LP+F  AA R FAA HGLA R++A+
Sbjct: 70  HASLLLRSGSLSFLFTAPYA------HGADAATAALPSFSAAAARRFAADHGLAVRAVAL 123
Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPG 190
            V DA+ AF  SVA GA+P+  PV L     +AEV+LYGDVVLRYVSY D A    FLPG
Sbjct: 124 RVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPG 183
Query: 191 FEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGL 250
           FE     S    DYG+ R DH VGNVPELAPA AY   FTGFHEFAEFT EDVGT+ESGL
Sbjct: 184 FEGV--ASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGL 241
Query: 251 NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRK 310
           NS+VLANN E VLLP+NEPV GTKR+SQIQT+L+H+ G GVQH+AL S+D+ RTLREM+ 
Sbjct: 242 NSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQA 301
Query: 311 RSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV 370
           RS +GGFEFM  P   YY  ++ RAGDVLT+ QIK+C+ELGVLVDRDDQG LLQIFTKPV
Sbjct: 302 RSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQIFTKPV 361
Query: 371 GDRYVHLLMLVTTFSFSSK 389
           GDR    L ++       K
Sbjct: 362 GDRPTLFLEIIQRIGCMEK 380

>pdb|3ISQ|A Chain A, Crystal Structure Of Human 4-Hydroxyphenylpyruvate Dioxygenase Length = 393

Iteration: 1
 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 178/361 (49%), Gaps = 38/361 (10%)
Query: 24  KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
           K +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + F
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVF 62
Query: 84  VFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
           V ++  +P                  DH         HG   + IA EVED D     + 
Sbjct: 63  VLSSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCDYIVQKAR 104
Query: 144 AHGAKPSSPPVI-LDNLAVI--AEVQLYGDVVLRYVSYKDKANHL-DFLPGFEP---TDE 196
             GAK    P +  D    +  A +Q YGD     V   +K N++  FLPG+E     D 
Sbjct: 105 ERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKMNYIGQFLPGYEAPAFMDP 161
Query: 197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVV 254
           +        +  +DH VGN P  E+  A  +      FH F       V T  S L S+V
Sbjct: 162 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIV 221
Query: 255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGV 314
           +AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+R   
Sbjct: 222 VANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER--- 277
Query: 315 GGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGD 372
            G EF+ S P TYYK L+   +   +   E I   EEL +LVD D++G LLQIFTKPV D
Sbjct: 278 -GLEFL-SVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQD 335
Query: 373 R 373
           R
Sbjct: 336 R 336

>pdb|1SQI|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By Crystal Structures Of Plant And Mammalian 4- Hydroxyphenylpyruvate Dioxygenases Length = 393

Iteration: 1
 Score =  177 bits (449), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 183/367 (49%), Gaps = 38/367 (10%)
Query: 18  FVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR 77
           +  + PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++
Sbjct: 4   YSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK 63
Query: 78  SGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADV 137
            G + FV  +  +P                  DH         HG   + IA EVED + 
Sbjct: 64  QGKIVFVLCSALNPWNKEMG------------DHLV------KHGDGVKDIAFEVEDCEH 105
Query: 138 AFNTSVAHGAKPSSPPVILDNL---AVIAEVQLYGDVVLRYVSYKDKANHLD-FLPGFE- 192
               +   GAK    P + ++       A +Q YGD     V   +K N+   FLPGFE 
Sbjct: 106 IVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEA 162
Query: 193 PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSES 248
           PT + +  P      +  +DH VGN P  E+  A  +      FH F       V T  S
Sbjct: 163 PTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYS 222
Query: 249 GLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREM 308
            L S+V+AN +E + +P+NEP  G ++KSQIQ Y+++N GAGVQH+AL +EDI  T+R +
Sbjct: 223 SLRSIVVANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHL 281
Query: 309 RKRSGVGGFEFMPSPPPTYYKNLKN--RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF 366
           R+R    G EF+ + P +YY+ L+   +   +   E +   EEL +LVD D++G LLQIF
Sbjct: 282 RER----GMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIF 336
Query: 367 TKPVGDR 373
           TKP+ DR
Sbjct: 337 TKPMQDR 343

>pdb|1T47|A Chain A, Structure Of Fe2-Hppd Bound To Ntbc Length = 381

Iteration: 1
 Score =  164 bits (415), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 163/355 (45%), Gaps = 30/355 (8%)
Query: 24  KSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF 83
           ++D F V     V F   +A   A  +S   GM +VA S    G+   ASY+L +G  RF
Sbjct: 14  QADPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARF 73
Query: 84  VFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSV 143
           V T+   P                  DH A       HG     +A+EV DA  A   ++
Sbjct: 74  VLTSVIKPATPWGHFLA---------DHVA------EHGDGVVDLAIEVPDARAAHAYAI 118
Query: 144 AHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSF 200
            HGA+  + P  L +     V+A +  YG    R+           +LPG+     I   
Sbjct: 119 EHGARSVAEPYELKDEHGTVVLAAIATYGKT--RHTLVDRTGYDGPYLPGYVAAAPIVEP 176
Query: 201 PLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN 258
           P     + +DH VGNV    +   V +     GF    EF  +D+ T  S L S V+A+ 
Sbjct: 177 PAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG 236
Query: 259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE 318
              V  P+NEP    K+KSQI  YLE   GAGVQH+AL + DI  T+R MR      G +
Sbjct: 237 TLKVKFPINEPAL-AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMR----AAGVQ 291
Query: 319 FMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           F+ + P +YY  L    GD  T   +    EL +L DRD+ G LLQIFTKPV DR
Sbjct: 292 FLDT-PDSYYDTLGEWVGD--TRVPVDTLRELKILADRDEDGYLLQIFTKPVQDR 343

>pdb|1CJX|A Chain A, Crystal Structure Of Pseudomonas Fluorescens Hppd Length = 357

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 29/263 (11%)
Query: 117 FAASHGLAARSIAVEVEDADVAFNTSVAHGAKP---SSPPVILDNLAV--IAEVQLYGDV 171
           FAA HG +   +A  V+D+  A+N ++  GA+P    + P+ L+  A+  I    LY   
Sbjct: 69  FAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLY--- 125
Query: 172 VLRYVSYKDKANHLDF--LPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSF 229
           ++           +DF  L G E        P+  G++ +DH   NV      V +   +
Sbjct: 126 LIDRFGEGSSIYDIDFVYLEGVERN------PVGAGLKVIDHLTHNVYR-GRMVYWANFY 178
Query: 230 TGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA 289
                F E    D+    +GL S  ++  D M+ +P+NE    +K   QI+ +L    G 
Sbjct: 179 EKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEE--SSKGAGQIEEFLMQFNGE 236
Query: 290 GVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEE 349
           G+QH+A +++D+ +T   ++K     G  FM +PP TYY+ L+ R  D    E + Q + 
Sbjct: 237 GIQHVAFLTDDLVKTWDALKKI----GMRFMTAPPDTYYEMLEGRLPD--HGEPVDQLQA 290
Query: 350 LGVLVD----RDDQGTLLQIFTK 368
            G+L+D      D+  LLQIF++
Sbjct: 291 RGILLDGSSVEGDKRLLLQIFSE 313

>pdb|2R5V|A Chain A, Hydroxymandelate Synthase Crystal Structure Length = 357

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 124/308 (40%), Gaps = 36/308 (11%)
Query: 71  HASYLLRSGDLRFVFTAPYSPXXXXXXXXXXXXXXLPTFDHAACRSFAASHGLAARSIAV 130
           H S  LR G +  V T P S                   D     ++  +HG     IA+
Sbjct: 40  HRSIALRQGQVTLVLTEPTS-------------------DRHPAAAYLQTHGDGVADIAM 80
Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVI-AEVQLYGDVVLRYVSYKDKANHLDFLP 189
              D   A+  +V  GA+    P      AV  A +  +GDVV   +     +  L   P
Sbjct: 81  ATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELP--P 138
Query: 190 GFEPTDEISSFPL-DYGIRRLDH--AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTS 246
           GF  + ++++    D  +  +DH     N  +L P V Y +   GF +  +   E +   
Sbjct: 139 GFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFD---EHIVVG 195
Query: 247 ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLR 306
              +NS V+ +    V L + EP        QI  +L+ ++GAGVQH+A  S D  R ++
Sbjct: 196 AQAMNSTVVQSASGAVTLTLIEPDRNAD-PGQIDEFLKDHQGAGVQHIAFNSNDAVRAVK 254
Query: 307 EMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF 366
            + +R    G EF+ +P   YY  L  R    L    +       VL D D  G L QIF
Sbjct: 255 ALSER----GVEFLKTPGA-YYDLLGERI--TLQTHSLDDLRATNVLADEDHGGQLFQIF 307
Query: 367 TKPVGDRY 374
           T     R+
Sbjct: 308 TASTHPRH 315

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	389
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-110
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-108
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-83
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	2e-78
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	7e-74
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	6e-68
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	2e-04
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	5e-04
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	9e-04

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score =  328 bits (841), Expect = e-110
 Identities = 276/364 (75%), Positives = 318/364 (87%), Gaps = 1/364 (0%)

Query: 11  KLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTV 70
           KLVGF  FVR+NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN V
Sbjct: 4   KLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMV 63

Query: 71  HASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAV 130
           HASYLL SGDLRF+FTAPYSPS+S       ++AS+P+FDH +CRSF +SHGL  R++A+
Sbjct: 64  HASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAI 123

Query: 131 EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKAN-HLDFLP 189
           EVEDA+ AF+ SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK +     +FLP
Sbjct: 124 EVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLP 183

Query: 190 GFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG 249
           GFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+ESG
Sbjct: 184 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESG 243

Query: 250 LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
           LNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLREMR
Sbjct: 244 LNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMR 303

Query: 310 KRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP 369
           KRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIFTKP
Sbjct: 304 KRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKP 363

Query: 370 VGDR 373
           +GDR
Sbjct: 364 LGDR 367

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score =  322 bits (826), Expect = e-108
 Identities = 234/369 (63%), Positives = 275/369 (74%), Gaps = 8/369 (2%)

Query: 5   TAELLVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDL 64
             +   +LVG +NFVR NP+SDRF    FHHVE WC DA + A RFS+GLG P+ A+SDL
Sbjct: 4   AEQAAFRLVGHRNFVRFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDL 63

Query: 65  STGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLA 124
           STGN+ HAS LLRSG L F+FTAPY+        A  ++A+LP+F  AA R FAA HGLA
Sbjct: 64  STGNSAHASLLLRSGSLSFLFTAPYAH------GADAATAALPSFSAAAARRFAADHGLA 117

Query: 125 ARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANH 184
            R++A+ V DA+ AF  SVA GA+P+  PV L     +AEV+LYGDVVLRYVSY D A  
Sbjct: 118 VRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGAAG 177

Query: 185 LDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVG 244
             FLPGFE     S    DYG+ R DH VGNVPELAPA AY   FTGFHEFAEFT EDVG
Sbjct: 178 EPFLPGFEGVA--SPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVG 235

Query: 245 TSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRT 304
           T+ESGLNS+VLANN E VLLP+NEPV GTKR+SQIQT+L+H+ G GVQH+AL S+D+ RT
Sbjct: 236 TAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRT 295

Query: 305 LREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ 364
           LREM+ RS +GGFEFM  P   YY  ++ RAGDVLT+ QIK+C+ELGVLVDRDDQG LLQ
Sbjct: 296 LREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQ 355

Query: 365 IFTKPVGDR 373
           IFTKPVGDR
Sbjct: 356 IFTKPVGDR 364

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score =  258 bits (660), Expect = 2e-83
 Identities = 119/359 (33%), Positives = 158/359 (44%), Gaps = 30/359 (8%)

Query: 20  RQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG 79
               ++D F V     V F   +A   A  +S   GM +VA S    G+   ASY+L +G
Sbjct: 10  DTARQADPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG 69

Query: 80  DLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAF 139
             RFV T+   P+                          A HG     +A+EV DA  A 
Sbjct: 70  SARFVLTSVIKPATPWGHFLA---------------DHVAEHGDGVVDLAIEVPDARAAH 114

Query: 140 NTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDE 196
             ++ HGA+  + P  L       V+A +  YG      V          +LPG+     
Sbjct: 115 AYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDG--PYLPGYVAAAP 172

Query: 197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVV 254
           I   P     + +DH VGNV    +   V +     GF    EF  +D+ T  S L S V
Sbjct: 173 IVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKV 232

Query: 255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGV 314
           +A+    V  P+NEP    K+KSQI  YLE   GAGVQH+AL + DI  T+R MR     
Sbjct: 233 VADGTLKVKFPINEPALA-KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAA--- 288

Query: 315 GGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
            G +F+   P +YY  L    G   T   +    EL +L DRD+ G LLQIFTKPV DR
Sbjct: 289 -GVQFLD-TPDSYYDTLGEWVG--DTRVPVDTLRELKILADRDEDGYLLQIFTKPVQDR 343

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score =  245 bits (627), Expect = 2e-78
 Identities = 122/361 (33%), Positives = 170/361 (47%), Gaps = 36/361 (9%)

Query: 23  PKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLR 82
            K +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + 
Sbjct: 2   AKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIV 61

Query: 83  FVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTS 142
           FV ++  +P   +  D                      HG   + IA EVED D     +
Sbjct: 62  FVLSSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCDYIVQKA 103

Query: 143 VAHGAKPSSPPVILDNLA---VIAEVQLYGDVVLRYVSYKDKANHLDFLPGF---EPTDE 196
              GAK    P +  +       A +Q YGD     V          FLPG+      D 
Sbjct: 104 RERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVE--KMNYIGQFLPGYEAPAFMDP 161

Query: 197 ISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVV 254
           +        +  +DH VGN P  E+  A  +      FH F       V T  S L S+V
Sbjct: 162 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIV 221

Query: 255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGV 314
           +AN +E + +P+NEP  G K+KSQIQ Y+++N GAGVQH+AL +EDI   +R +R+R   
Sbjct: 222 VANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER--- 277

Query: 315 GGFEFMPSPPPTYYKNLKNRAG--DVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGD 372
            G EF+   P TYYK L+ +     +   E I   EEL +LVD D++G LLQIFTKPV D
Sbjct: 278 -GLEFLS-VPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQD 335

Query: 373 R 373
           R
Sbjct: 336 R 336

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis} Length = 357

 Score =  233 bits (594), Expect = 7e-74
 Identities = 83/345 (24%), Positives = 127/345 (36%), Gaps = 40/345 (11%)

Query: 33  FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPS 92
             +VE +  +    A  +       +       + +  H S  LR G +  V T P S  
Sbjct: 6   IDYVEMYVENLEVAAFSWVDKYAFAVAGT----SRSADHRSIALRQGQVTLVLTEPTSD- 60

Query: 93  ISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP 152
                                  ++  +HG     IA+   D   A+  +V  GA+    
Sbjct: 61  ------------------RHPAAAYLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRA 102

Query: 153 PVILDNLAV-IAEVQLYGDVVLRYVSYKDKANHLDFLPGFEP-TDEISSFPLDYGIRRLD 210
           P      AV  A +  +GDVV   +     +   +  PGF    D  +    D  +  +D
Sbjct: 103 PGQHSEAAVTTATIGGFGDVVHTLIQRDGTSA--ELPPGFTGSMDVTNHGKGDVDLLGID 160

Query: 211 HAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNE 268
           H    +   +L P V Y +   GF +  +     +      +NS V+ +    V L + E
Sbjct: 161 HFAICLNAGDLGPTVEYYERALGFRQIFDE---HIVVGAQAMNSTVVQSASGAVTLTLIE 217

Query: 269 PVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYY 328
           P        QI  +L+ ++GAGVQH+A  S D  R ++ + +R    G EF+   P  YY
Sbjct: 218 PDRN-ADPGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSER----GVEFLK-TPGAYY 271

Query: 329 KNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
             L  R    L    +       VL D D  G L QIFT     R
Sbjct: 272 DLLGERIT--LQTHSLDDLRATNVLADEDHGGQLFQIFTASTHPR 314

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3 Length = 357

 Score =  217 bits (554), Expect = 6e-68
 Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 51/359 (14%)

Query: 21  QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD 80
           +NP      +  F  +EF           F   +G   VA       +     +L R G+
Sbjct: 5   ENP----MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVAT------HRSKNVHLYRQGE 53

Query: 81  LRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFN 140
           +  +     +   S                      FAA HG +   +A  V+D+  A+N
Sbjct: 54  INLILNNEPNSIASY---------------------FAAEHGPSVCGMAFRVKDSQKAYN 92

Query: 141 TSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSF 200
            ++  GA+P            +  ++  G   L  +    + + + +   F   + +   
Sbjct: 93  RALELGAQPIHIDT-GPMELNLPAIKGIGGAPLYLIDRFGEGSSI-YDIDFVYLEGVERN 150

Query: 201 PLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN 258
           P+  G++ +DH   NV    +     + +    F E   F   D+    +GL S  ++  
Sbjct: 151 PVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYF---DIKGEYTGLTSKAMSAP 207

Query: 259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE 318
           D M+ +P+NE    +K   QI+ +L    G G+QH+A +++D+ +T   ++K     G  
Sbjct: 208 DGMIRIPLNEE--SSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKI----GMR 261

Query: 319 FMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD----DQGTLLQIFTKPVGDR 373
           FM +PP TYY+ L+ R  D    E + Q +  G+L+D      D+  LLQIF++ +   
Sbjct: 262 FMTAPPDTYYEMLEGRLPDH--GEPVDQLQARGILLDGSSVEGDKRLLLQIFSETLMGP 318

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 22/131 (16%), Positives = 49/131 (37%), Gaps = 23/131 (17%)

Query: 205 GIRRLDHAVG-NVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVL-------- 255
            +R     +G  V ++  ++     F G  +   F  +D   + +  N            
Sbjct: 16  DMRNTVQ-IGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAF 74

Query: 256 --ANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSG 313
                 ++ L+  +E        S  + +L+ N G G+ H+A V +D+ R + E+ ++  
Sbjct: 75  FELGPLQLELIEPDEN------PSTWREFLDKN-GEGIHHIAFVVKDMDRKVEELYRK-- 125

Query: 314 VGGFEFMPSPP 324
             G + +    
Sbjct: 126 --GMKVIQKGD 134

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 39.3 bits (91), Expect = 5e-04
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 9/120 (7%)

Query: 206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLP 265
              +DH     P+   A  Y +   G+HE       + G  E  + +      + M  + 
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEI-MMAPAAKLTEHMTQVQ 65

Query: 266 MNEPVFGTKRKSQIQTYLE-HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPP 324
           +  P      +S +  +L  HN  AG+ H+A   +DI      +R+R    G + +   P
Sbjct: 66  VMAP---LNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRER----GVQLLYDEP 118

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLP 265
           + RL+H    VP+L  A A+ K+  G               E G++ V +   +  +   
Sbjct: 3   LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLP-----EHGVSVVFVNLGNTKM--- 54

Query: 266 MNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPP 324
             E +      S I  +L+ N+  G+ H+ +  ++I   + +++K+        +    
Sbjct: 55  --ELLHPLGLDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKK----KIRSLSEEV 107

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	389
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	100.0
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	100.0
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	100.0
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	100.0
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.91
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.9
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.9
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.9
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.89
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.88
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.88
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.88
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.87
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.87
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.87
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.85
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.85
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.82
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.7
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.67
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.67
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.64
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.61
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.6
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.59
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.58
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.56
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.55
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.55
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.52
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.5
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.5
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.49
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.48
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.47
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.46
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.44
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.42
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.41
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.41
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.41
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.4
2i7r_A	118	Conserved domain protein; structural genomics cons	99.39
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.37
3ghj_A	141	Putative integron gene cassette protein; integron	99.37
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.37
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.37
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.36
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.35
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.35
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.34
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.33
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.33
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.32
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.31
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.31
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.31
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.31
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.3
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.29
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.29
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.28
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.28
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.28
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.28
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.27
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.26
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.26
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.26
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.25
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.25
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.24
3ghj_A	141	Putative integron gene cassette protein; integron	99.24
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.23
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.22
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.22
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.22
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.21
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.21
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.21
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.21
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.21
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.2
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.2
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.2
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.19
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.19
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.19
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.19
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.18
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.15
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.15
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.15
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.14
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.14
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.12
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.12
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.11
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.08
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.04
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.02
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.02
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.0
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	98.98
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	98.98
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	98.98
2i7r_A	118	Conserved domain protein; structural genomics cons	98.96
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	98.96
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	98.93
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	98.92
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	98.91
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	98.9
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	98.9
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.9
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	98.89
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.89
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	98.88
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	98.87
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	98.85
1xy7_A	166	Unknown protein; structural genomics, protein stru	98.84
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.83
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	98.83
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.82
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.82
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.82
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	98.8
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	98.79
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	98.76
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.76
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.74
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	98.72
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	98.72
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	98.68
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.65
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	98.64
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.62
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	98.62
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	98.56
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	98.53
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.51
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	98.5
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.47
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	98.46
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	98.38
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	98.38
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.3
1xy7_A	166	Unknown protein; structural genomics, protein stru	98.25
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.22
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	98.16
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	98.11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.99
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	97.67
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.63
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	97.6
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	97.42
1tsj_A	139	Conserved hypothetical protein; structural genomic	97.25
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.97
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	96.74
3l20_A	172	Putative uncharacterized protein; hypothetical pro	96.54
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	95.39
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	95.2
3lho_A	267	Putative hydrolase; structural genomics, joint cen	90.86
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	90.47
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	87.71
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	87.41
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	80.93

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=100.00  E-value=1.5e-77  Score=598.16  Aligned_cols=341  Identities=35%  Similarity=0.556  Sum_probs=307.4

Q ss_pred             CCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCC
Q 016432           22 NPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        22 ~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ++|++++.+++|+||+|+|+|++++++||++.|||+++++.++++|++++.++++++|++.|+|++|..|++        
T Consensus         1 ~~~~~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s--------   72 (393)
T 3isq_A            1 GAKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWN--------   72 (393)
T ss_dssp             -CCCSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTC--------
T ss_pred             CCCCCCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCc--------
Confidence            368889999999999999999999999999999999999988888888888999999999999999876652        


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeecc---CceEEEEEEecCCeEEEEeec
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILD---NLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~---~~~~~~~v~~~gg~~~~fve~  178 (389)
                                .++++|+++||+|++||||+|+|+++++++|+++|++++.+|+...   +.++++.|+++||++|+|||+
T Consensus        73 ----------~~~a~fl~~hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           73 ----------KEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             ----------HHHHHHHHHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             ----------hHHHHHHHhcCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence                      3788999999999999999999999999999999999999997543   357899999999999999996


Q ss_pred             CCCCCCCCCCCCCccCCCCCC---CCccccceeEeEEEEecCC--HHHHHHHHHHhhCCeEeEEEecccccccccCceEE
Q 016432          179 KDKANHLDFLPGFEPTDEISS---FPLDYGIRRLDHAVGNVPE--LAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSV  253 (389)
Q Consensus       179 ~~~~~~g~~lp~f~~~~~~~~---~~~~~~~~~iDHv~~~V~d--l~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~  253 (389)
                        ..|.+.|+|+|.+.....+   ...+.++++|||++++|++  |++|+.||+++|||++.++++.+++.++.+|++|.
T Consensus       143 --~~y~~~flpg~~~~~~~~~~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~  220 (393)
T 3isq_A          143 --MNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSI  220 (393)
T ss_dssp             --ESCCSSSCTTCBSCSCCCTTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEE
T ss_pred             --ccCcCCCCCCccccccccccccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEE
Confidence              4688899999986532111   1345689999999999986  99999999999999999988766677777899999


Q ss_pred             EEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhh
Q 016432          254 VLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKN  333 (389)
Q Consensus       254 ~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~  333 (389)
                      ++.++++.++|+|++|..+ ...|||++||++++|+|+|||||.|+||.+++++|+++    |++|+++| ++||++|.+
T Consensus       221 ~~~~~~g~v~i~L~ep~~~-~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~----Gv~~l~~P-~~YY~~l~~  294 (393)
T 3isq_A          221 VVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRER----GLEFLSVP-STYYKQLRE  294 (393)
T ss_dssp             EEECTTSSCEEEEEEEECC-SBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHT----TCCBCCCC-HHHHHHHHH
T ss_pred             EEECCCCCEEEEEecCCCC-CCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHc----CCccCCCC-ccHHHHHHH
Confidence            9999999999999999743 47899999999999999999999999999999999999    99999998 999999999


Q ss_pred             hhCC--CCChhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          334 RAGD--VLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       334 r~~~--~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      |++.  +..+|++++|+++|||||+|++||||||||||+++|||||||||||+|+.|
T Consensus       295 r~~~~~~~~~e~~~~l~~~~IL~D~d~~g~llQifT~~~~~rpt~FfEiIqR~g~~G  351 (393)
T 3isq_A          295 KLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQG  351 (393)
T ss_dssp             HHTTCSSCCCSCHHHHHHHTCEEEECSSCEEEEEEBCCSSSSSCCEEEEEEEESCCS
T ss_pred             HhccccccccccHHHHHhcCcEEccCCCceEEEEEeeccCCCCceEEEEEEEcCCCc
Confidence            9983  235699999999999999999999999999999999999999999999876

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=100.00  E-value=1.5e-76  Score=598.43  Aligned_cols=371  Identities=74%  Similarity=1.216  Sum_probs=305.0

Q ss_pred             eeEeccccccccCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccC
Q 016432           10 VKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPY   89 (389)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~   89 (389)
                      .|||||+||++.||+|+++.+++|+||+|+|+|++++++||++.|||+++++.+.++|+++..++++++|++.|+|+++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~   82 (424)
T 1sqd_A            3 FKLVGFSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPY   82 (424)
T ss_dssp             -----------CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEEC
T ss_pred             ceecccccceecCCCCccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCC
Confidence            58999999999999999999999999999999999999999999999999987766677777888899999999999985


Q ss_pred             CCCCccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecC
Q 016432           90 SPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYG  169 (389)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~g  169 (389)
                      .++......+.+...++|.|+.+.+..|+..||.|++||||+|+|+++++++|+++|++++.+|+...++..++.+++||
T Consensus        83 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~G  162 (424)
T 1sqd_A           83 SPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYG  162 (424)
T ss_dssp             CGGGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEET
T ss_pred             CCcccccccccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCC
Confidence            44210000000123356677766789999999999999999999999999999999999999998765678899999999


Q ss_pred             CeEEEEeecCCCCCC---CCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEeccccccc
Q 016432          170 DVVLRYVSYKDKANH---LDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTS  246 (389)
Q Consensus       170 g~~~~fve~~~~~~~---g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~  246 (389)
                      |+.++|+++.  ++.   ..|+|+|++.+.......+.++.+|||++++|+|+++|++||+++|||++.++++.+++.+.
T Consensus       163 g~~~~lvd~~--g~~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~  240 (424)
T 1sqd_A          163 DVVLRYVSYK--AEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTA  240 (424)
T ss_dssp             TEEEEEEEEC--CC------CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC-------
T ss_pred             CcEEEEEecC--CCCCCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccc
Confidence            9999999963  332   24889987664322123566899999999999999999999999999999998876666677


Q ss_pred             ccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHH----hcCCCCceecCC
Q 016432          247 ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRK----RSGVGGFEFMPS  322 (389)
Q Consensus       247 ~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~----~~~~~Gv~~l~~  322 (389)
                      .+|++++++.++++.++|+|+++..+....||+++|++++.|+|+|||||.|+||.+++++|++    +    |++|+++
T Consensus       241 ~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~----Gv~~l~~  316 (424)
T 1sqd_A          241 ESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIG----GFDFMPS  316 (424)
T ss_dssp             -CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGT----SCCBCCC
T ss_pred             cccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccC----CcEEecC
Confidence            7899999999999999999999963224678999999988899999999999999999999999    7    9999998


Q ss_pred             CChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCC
Q 016432          323 PPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSF  386 (389)
Q Consensus       323 P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~  386 (389)
                      ||++||++|.+|++.+++++++++|+++|||||+|++|+||||||||+++|||||||||||+|.
T Consensus       317 pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift~~~~~~pt~FfEiIqR~g~  380 (424)
T 1sqd_A          317 PPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGC  380 (424)
T ss_dssp             CCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBCCSSSSSCCEEEEEEEEEC
T ss_pred             CCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEEEccccCCCCceEEEEEEEcCc
Confidence            7799999999999877889999999999999999999999999999999999999999999987

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=1.6e-75  Score=590.00  Aligned_cols=368  Identities=63%  Similarity=1.019  Sum_probs=305.1

Q ss_pred             ceeEeccccccccCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEcc
Q 016432            9 LVKLVGFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAP   88 (389)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p   88 (389)
                      =.|||||+||++.||+++++.+++|+||+|+|+|++++++||++.|||+++++.++++|++...++++++|+++|+|+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~   87 (418)
T 1sp8_A            8 AFRLVGHRNFVRFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAP   87 (418)
T ss_dssp             -----------CCCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccchhhcCCCCccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecC
Confidence            36999999999999999999999999999999999999999999999999998877766555678889999999999988


Q ss_pred             CCCCCccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEec
Q 016432           89 YSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLY  168 (389)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~  168 (389)
                      ..+...      ....++|.|..+.+.+|+..||+|++||||+|+|+++++++|+++|++++.+|....++++++.|++|
T Consensus        88 ~~~~~~------~~~~p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~  161 (418)
T 1sp8_A           88 YAHGAD------AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELY  161 (418)
T ss_dssp             CCSSCC------GGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred             CCCccc------ccccccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecC
Confidence            654210      01224556666788999999999999999999999999999999999999998765567889999999


Q ss_pred             CCeEEEEeecCCCCCCC--CCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEeccccccc
Q 016432          169 GDVVLRYVSYKDKANHL--DFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTS  246 (389)
Q Consensus       169 gg~~~~fve~~~~~~~g--~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~  246 (389)
                      ||+.++|+++.  ++.+  .|+|+|.+.+..  ...+.++.+||||+++|+|+++|++||+++|||++.++++.+++.+.
T Consensus       162 Gg~~~~lvd~~--~~~~~~~f~p~~~~~~~~--~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~  237 (418)
T 1sp8_A          162 GDVVLRYVSYP--DGAAGEPFLPGFEGVASP--GAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTA  237 (418)
T ss_dssp             TTEEEEEEECC--TTGGGSSSSTTCEECCCT--TCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC------
T ss_pred             CCEEEEEEccC--CCCCCcccCCCCcccCCC--CCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccc
Confidence            99999999953  2323  489998765321  23456899999999999999999999999999999998876666667


Q ss_pred             ccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChh
Q 016432          247 ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPT  326 (389)
Q Consensus       247 ~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~  326 (389)
                      .+|+++.++.++++.++|+|+++..++.+.+++++|++.+.|+|+|||||+|+||.+++++|+++++..|++|+++||++
T Consensus       238 ~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~Pp~~  317 (418)
T 1sp8_A          238 ESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSD  317 (418)
T ss_dssp             --CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHH
T ss_pred             cccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCCCcc
Confidence            78999999999999999999999632246789999999888999999999999999999999992111199999997799


Q ss_pred             hhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCC
Q 016432          327 YYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSF  386 (389)
Q Consensus       327 YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~  386 (389)
                      ||++|.+|++.+++++++++|+++|||||+|++|+||||||||+++|||||||||||+|.
T Consensus       318 YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift~~~~~~pt~FfEiIqR~g~  377 (418)
T 1sp8_A          318 YYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEIIQRIGC  377 (418)
T ss_dssp             HHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBCCSSSSSCCEEEEEEEEEC
T ss_pred             hhHHHHHhhccccchhhHHHHHHhCcEEecCCCCeEEEEEecccCCCCceEEEEEEeeCc
Confidence            999999999877889999999999999999999999999999999999999999999987

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=1.1e-65  Score=513.02  Aligned_cols=338  Identities=35%  Similarity=0.536  Sum_probs=289.9

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +++.+++++||+|+|+|++++++||+++|||+++++.++++++++..++++++|+++|+|+++..+++.+          
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~----------   85 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW----------   85 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHH----------
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcc----------
Confidence            3467999999999999999999999999999999987666666666788999999999999875554200          


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCee---ccCceEEEEEEecCCeEEEEeecCCCC
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI---LDNLAVIAEVQLYGDVVLRYVSYKDKA  182 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~---~~~~~~~~~v~~~gg~~~~fve~~~~~  182 (389)
                           ...+..++..||+|++||||+|+|+++++++|+++|++++.+|..   ..+.++++.+++|||+.++|+++  .+
T Consensus        86 -----~~~~~~~~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~--~~  158 (381)
T 1t47_A           86 -----GHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR--TG  158 (381)
T ss_dssp             -----HHHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE--EE
T ss_pred             -----hhHHHHHHHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec--CC
Confidence                 001678889999999999999999999999999999999988864   23356789999999999999995  34


Q ss_pred             CCCCCCCCCccCCCCCCCCccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc
Q 016432          183 NHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE  260 (389)
Q Consensus       183 ~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g  260 (389)
                      +.+.|+|++.+.+.......+.++.+|||++++|+  |+++|++||+++|||++.++++.+++..+.+++++.++.++++
T Consensus       159 ~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g  238 (381)
T 1t47_A          159 YDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL  238 (381)
T ss_dssp             ECSSSSTTCEECCCSSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS
T ss_pred             CCCCCCCCCccccccccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCC
Confidence            55678998864321111234567999999999999  9999999999999999987754333334556789999998888


Q ss_pred             ceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCC
Q 016432          261 MVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLT  340 (389)
Q Consensus       261 ~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~  340 (389)
                      .++|+|+++..+ ..++++++|++.++|+|+|||||.|+||.+++++|+++    |++++.+| .+||++|..|++  .+
T Consensus       239 ~v~i~l~~~~~~-~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~----Gv~~~~~p-~~Yy~~l~~R~~--~~  310 (381)
T 1t47_A          239 KVKFPINEPALA-KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAA----GVQFLDTP-DSYYDTLGEWVG--DT  310 (381)
T ss_dssp             CSEEEEEEECCS-SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHT----TCCBCCCC-GGGTTSHHHHHC--CC
T ss_pred             cEEEEEecCCcC-CCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHc----CCccCCCC-ccHHHHHHHhcc--cc
Confidence            999999998633 46789999999878899999999999999999999999    99999998 999999999998  67


Q ss_pred             hhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          341 DEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       341 ~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      +++++.|++++||||+|++|+||||||+|+++|||||||||||+|+.|
T Consensus       311 ~~~~~~l~~~~il~d~d~~g~llqift~~~~~~pt~f~E~iqR~g~~g  358 (381)
T 1t47_A          311 RVPVDTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGSMG  358 (381)
T ss_dssp             SSCHHHHHHHTCEEEECSSCEEEEEEBCCSSSSSCCEEEEEEEEBCCC
T ss_pred             chhHHHHHHhCeEEeeCCCCeEEEEeccCCCCCCeeEEEEEEEcCCCc
Confidence            999999999999999999999999999999999999999999999876

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=100.00  E-value=8.9e-57  Score=444.14  Aligned_cols=325  Identities=25%  Similarity=0.396  Sum_probs=275.9

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+++++||+|+|+|++++++||++.|||+++++...++|    .++++++|++.++|+.+..+++              
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g----~~~~~~~g~~~l~l~~~~~~~~--------------   62 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH----RSIALRQGQVTLVLTEPTSDRH--------------   62 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE----EEEEEEETTEEEEEEEESSTTS--------------
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc----eEEEEEeCCEEEEEeCCCCCCC--------------
Confidence            4589999999999999999999999999999988654433    4778899999999998654442              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEEEeecCCCCCCCC
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVSYKDKANHLD  186 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~fve~~~~~~~g~  186 (389)
                           ....+...||+|+++|||+|+|+++++++|+++|++++.+|... .+..+++.+++|||+.++|+++  .++.+.
T Consensus        63 -----~~~~~~~~~g~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~--~~~~~~  135 (357)
T 2r5v_A           63 -----PAAAYLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQR--DGTSAE  135 (357)
T ss_dssp             -----HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEEC--CSSSCC
T ss_pred             -----HHHHHHHhcCCeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEec--ccCCCC
Confidence                 56677788999999999999999999999999999998877632 2456789999999999999995  345567


Q ss_pred             CCCCCccCCCC-CCCCccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceE
Q 016432          187 FLPGFEPTDEI-SSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVL  263 (389)
Q Consensus       187 ~lp~f~~~~~~-~~~~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~  263 (389)
                      |.|++.+.+.. .....+.++.+|||++++|+  |++++++||+++|||++.+..+   +....+++++.++.++++.+.
T Consensus       136 f~p~~~~~~~~~~~~~~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~---~~~~~~~~~~~~l~~~~g~~~  212 (357)
T 2r5v_A          136 LPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEH---IVVGAQAMNSTVVQSASGAVT  212 (357)
T ss_dssp             CCTTCEECSCCCCTTCTTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEE---EEETTEEEEEEEEECTTSCCE
T ss_pred             CCCCCcccCcccccCCCCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEe---eccCCcceEEEEEECCCCCEE
Confidence            88888543211 11134567999999999999  9999999999999999987643   112345678888988888899


Q ss_pred             EEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhh
Q 016432          264 LPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQ  343 (389)
Q Consensus       264 l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~  343 (389)
                      |+|+++... ...+++++|+..++++|+|||||.|+||++++++|+++    |++++.+| .+||+++..|++  ..+++
T Consensus       213 l~l~~~~~~-~~~~~~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~----Gv~~~~~p-~~yy~~~~~r~~--~~~~~  284 (357)
T 2r5v_A          213 LTLIEPDRN-ADPGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSER----GVEFLKTP-GAYYDLLGERIT--LQTHS  284 (357)
T ss_dssp             EEEEEECTT-SBCCHHHHHHHHHTSSEEEEEEEECSCHHHHHHHHHHT----TCCBCCCC-HHHHHTTTTTCC--CSSSC
T ss_pred             EEEeeecCC-CCCchhHHHHHhcCCCCccEEEEEcCCHHHHHHHHHHc----CCCcCCCc-hhHHHHHHHhhc--cchhh
Confidence            999988632 34678999998777889999999999999999999999    99999998 999999999998  67899


Q ss_pred             HHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          344 IKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       344 ~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      +++|++++||||+|++|+||||||+|+.+|||||||||||+|+.|
T Consensus       285 ~~~~~~~~~l~~~Dp~G~llqi~t~~~~~~~~~f~e~i~r~~~~g  329 (357)
T 2r5v_A          285 LDDLRATNVLADEDHGGQLFQIFTASTHPRHTIFFEVIERQGAGT  329 (357)
T ss_dssp             HHHHHHHTCEEEEETTEEEEEEEBCCCSTTSCCEEEEEEEEBCCS
T ss_pred             HHHHHHcCeEEecCCCceEEEEEccCCCCCCeEEEEEEEEcCCCc
Confidence            999999999999999999999999999999999999999999876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=9.4e-57  Score=444.56  Aligned_cols=315  Identities=24%  Similarity=0.385  Sum_probs=268.1

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +.+++++||+|+|+|++++++|| +.|||++++++..      ..++++++|+++|+++..  ++               
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~------~~~~l~~~g~~~l~l~~~--~~---------------   63 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS------KNVHLYRQGEINLILNNE--PN---------------   63 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS------SSEEEEEETTEEEEEECC--SS---------------
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC------eeEEEEecCCEEEEEECC--CC---------------
Confidence            36999999999999999999999 7999999987531      136788999999999862  32               


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCCCCCCC-C
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHL-D  186 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~~~g-~  186 (389)
                          +.+..|+..||+|+++|||+|+|+++++++|+++|++++.+|.. .+...++.+++|||+.++|+++  .++.+ .
T Consensus        64 ----~~~~~~~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~~~~gg~~~~~vd~--~~~~~~~  136 (357)
T 1cjx_A           64 ----SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDR--FGEGSSI  136 (357)
T ss_dssp             ----SHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECC--CSSSCCH
T ss_pred             ----chhhhhhhhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC-CCcEEEEeeeCCCCeEEEEECC--CCCCCCc
Confidence                25677888999999999999999999999999999999887754 3566788999999999999995  33333 3


Q ss_pred             CCCCCccCCCCCCCCccccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEE
Q 016432          187 FLPGFEPTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLL  264 (389)
Q Consensus       187 ~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l  264 (389)
                      |+|+|.+.+.....+.+.++.+|||++++|+  |+++|++||+++|||++.+..+..   +..+|++++++..+++.++|
T Consensus       137 ~~~~f~~~~~~~~~~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i  213 (357)
T 1cjx_A          137 YDIDFVYLEGVERNPVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIK---GEYTGLTSKAMSAPDGMIRI  213 (357)
T ss_dssp             HHHHEEECTTCCSSCCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEE---CSSCEEEEEEEECTTSSCEE
T ss_pred             CCCCcccCCccccCCCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEec---cCCcceEEEEEECCCCCEEE
Confidence            6777765432111234568999999999999  999999999999999998776422   23356778888888889999


Q ss_pred             EeccC-CCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecC-CCChhhhHhHhhhhCCCCChh
Q 016432          265 PMNEP-VFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMP-SPPPTYYKNLKNRAGDVLTDE  342 (389)
Q Consensus       265 ~l~e~-~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~-~P~~~YY~~l~~r~~~~~~~~  342 (389)
                      +|+++ .   ...+++++|++.++++|+|||||.|+||++++++|+++    |++++. +| .+||++|..|++  .+++
T Consensus       214 ~L~~~~~---~~~~~~~~~~~~~~g~g~~HiAf~v~Di~~~~~~L~~~----Gv~~~~~~p-~~Yy~~l~~r~~--~~~~  283 (357)
T 1cjx_A          214 PLNEESS---KGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKI----GMRFMTAPP-DTYYEMLEGRLP--DHGE  283 (357)
T ss_dssp             EEEEECT---TCCSHHHHHHHHHTSSBCCEEEEEESCHHHHHHHHHHT----TCCBCCCCC-HHHHHTHHHHST--TCCC
T ss_pred             EEeeecC---CCCChHHHhHHhcCCCCeeEEEEEcCCHHHHHHHHHHc----CCcccCCCC-hHHHHHHHHHhc--cccc
Confidence            99998 4   56789999998777889999999999999999999999    999999 77 999999999998  6899


Q ss_pred             hHHHHHHcCceeecC----CCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          343 QIKQCEELGVLVDRD----DQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       343 ~~~~l~~~~IL~D~D----~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      +++.|++++||||+|    ++|+||||||+|++ +| +|||||||+|+.|
T Consensus       284 ~~~~l~~~~il~d~d~~~~~~g~llqift~~~~-~~-~f~E~iqr~~~~g  331 (357)
T 1cjx_A          284 PVDQLQARGILLDGSSVEGDKRLLLQIFSETLM-GP-VFFEFIQRKGDDG  331 (357)
T ss_dssp             CHHHHHHHTCEEEEEEETTEEEEEEEEEBCCCB-TT-BEEEEEEEEBCCS
T ss_pred             cHHHHHHcCeEEecCCCCCCCCeEEEEeccCCC-Cc-eEEEEEEEcCcCc
Confidence            999999999999999    78999999999999 55 9999999999865

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.91  E-value=3e-22  Score=195.90  Aligned_cols=255  Identities=12%  Similarity=0.096  Sum_probs=175.9

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      ++.+++|+||.|.|+|++++++||++.|||++..+.+   +    .+++...+   ...+++...               
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~----~~~l~~~~~~~~~~l~l~~~---------------   63 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q----SVYLRGYEDPYPWSLKITEA---------------   63 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T----EEEEECTTCSSSCSEEEEEC---------------
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C----EEEEEecCCCCceEEEEeeC---------------
Confidence            4568999999999999999999999999999987632   1    12332212   233444431               


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCC
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD  180 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~  180 (389)
                                       ...|+.++||.|+|   +++++++++++|+++...|.. .+..+...+++|+|..++|+... 
T Consensus        64 -----------------~~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~-~~~~~~~~f~DPdG~~iel~~~~-  124 (339)
T 3lm4_A           64 -----------------PEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQ-FGYGKTFEYQSPDGHNLQLLWEA-  124 (339)
T ss_dssp             -----------------SSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCS-TTBCCEEEEECTTCCEEEEECCB-
T ss_pred             -----------------CCCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCC-CCceEEEEEECCCCCEEEEEEee-
Confidence                             12378999999997   999999999999998766542 33455778899999999998731 


Q ss_pred             CCCCCC---CCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEE
Q 016432          181 KANHLD---FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLA  256 (389)
Q Consensus       181 ~~~~g~---~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~  256 (389)
                       ...+.   +.+........ ....++.+.+|+|+++.|.|++++++||+++|||++..... +      .| ....++.
T Consensus       125 -~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~------~g~~~~~~l~  195 (339)
T 3lm4_A          125 -EKYVAPPELRSKILTRPSK-KPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-D------GNVEIGAWMS  195 (339)
T ss_dssp             -CCCCCCGGGCCSSTTCSSC-CCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-E------TTEEEEEEEE
T ss_pred             -eEcCCCccccccccCcccc-cCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-c------CCcEEEEEEE
Confidence             11111   11111100010 01235579999999999999999999999999999887654 1      23 3345555


Q ss_pred             cCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhh
Q 016432          257 NNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKN  333 (389)
Q Consensus       257 ~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~  333 (389)
                      .......+.+.+...              ....+++|+||.|+|   |.+++++|+++    |+++...| ..       
T Consensus       196 ~~~~~~~l~~~~~~~--------------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~----G~~i~~~p-~~-------  249 (339)
T 3lm4_A          196 SNLLGHEVACMRDMT--------------GGHGKLHHLAFFYGTGQHNIDAVEMFRDY----DIQIEAGP-DK-------  249 (339)
T ss_dssp             SSSSSCSEEEEECTT--------------SCCSEEEEEEEECCCHHHHHHHHHHHHHT----TCEEEEEE-EE-------
T ss_pred             eCCCceEEEEeccCC--------------CCCCceeEEEEEeCCHHHHHHHHHHHHHC----CCeEEeCC-cc-------
Confidence            555445566654321              123469999999999   89999999999    99988766 21       


Q ss_pred             hhCCCCChhhHHHHHHcCceeecCCCceEEEEecc
Q 016432          334 RAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTK  368 (389)
Q Consensus       334 r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~  368 (389)
                       -+          ....-.+|=+|.+|.++.+|+.
T Consensus       250 -~~----------~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          250 -HG----------ITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             -ET----------GGGEEEEEEECTTSCEEEEECC
T ss_pred             -cc----------cCCceEEEEEcCCCCEEEEEEc
Confidence             11          0111235777889999999843

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.90  E-value=1.9e-21  Score=190.26  Aligned_cols=255  Identities=12%  Similarity=0.063  Sum_probs=169.2

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEc--C--CEEEEEEccCCCCCccccccCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRS--G--DLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~--g--~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      +.+.+|+||.+.|+|++++++||+++|||+++.+....  .+..   ...+..  |  +..|.|........        
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~---~l~~~~~~g~~g~~l~l~~~~~~~~--------   72 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTY---HLYFGNEGGKPGTIITFFPWAGARQ--------   72 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSE---EEEEESTTCCTTSEEEEEECTTCCB--------
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceE---EEEEecCCCCCCcEEEEEECCCCCC--------
Confidence            35899999999999999999999999999998764211  1221   122222  2  45666654311100        


Q ss_pred             CCCCCCCCChHHHHHHHHhcC-CceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          102 SSASLPTFDHAACRSFAASHG-LAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                       ...+ .++.|+||.|+  |+++++++|+++|+++..  .. ........+++|+|..++|++.
T Consensus        73 -----------------~~~~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~-~~g~~~~~f~DPdGn~iEl~~~  132 (335)
T 3oaj_A           73 -----------------GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IE-RFGEQYVEFDDPHGLHLEIVER  132 (335)
T ss_dssp             -----------------CBCCBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EE-ETTEEEEEEECTTSCEEEEEEC
T ss_pred             -----------------CCCCCCceEEEEEEecHHHHHHHHHHHHhCcceeee--ec-cCCcEEEEEECCCCCEEEEEEe
Confidence                             0012 37899999999  999999999999998764  22 2355678899999999999984


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC
Q 016432          179 KDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN  258 (389)
Q Consensus       179 ~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~  258 (389)
                      .+.. ...|..+.        .+....+++|+||++.|+|++++.+||+++|||++.....         + . ..+...
T Consensus       133 ~~~~-~~~~~~~~--------v~~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~---------~-~-~~~~~g  192 (335)
T 3oaj_A          133 EEGE-ANTWTFGE--------VTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG---------D-F-VRYRSA  192 (335)
T ss_dssp             SCSC-CCCCCBTT--------BCTTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET---------T-E-EEEECS
T ss_pred             CCCC-cCCCcCCC--------CChhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC---------C-E-EEEEeC
Confidence            2211 11232111        1224578999999999999999999999999999976521         1 1 122222


Q ss_pred             CcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhh
Q 016432          259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRA  335 (389)
Q Consensus       259 ~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~  335 (389)
                      +....+.|.+...  ...       ...+..|++||||.|+|   +.+..++|+++    |++..... +..|       
T Consensus       193 ~~~~~l~l~~~~~--~~~-------~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~----G~~~~~~~-~r~~-------  251 (335)
T 3oaj_A          193 GDIGNVIDLKLTP--IGR-------GQMGAGTVHHIAWRANDDEDQLDWQRYIASH----GYGVTPVR-DRNY-------  251 (335)
T ss_dssp             SSSSCEEEEESSC--CCB-------CBCSBTEEEEEEEEESSHHHHHHHHHHHHHT----TCCCCCCE-ECSS-------
T ss_pred             CCCcEEEEEeCCC--CCc-------CCCCCcceEEEEEEcCCHHHHHHHHHHHHHC----CCCccccc-cCCc-------
Confidence            1123344433221  111       01122359999999998   67799999999    99754332 2111       


Q ss_pred             CCCCChhhHHHHHHcCceeecCCCceEEEEecc
Q 016432          336 GDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTK  368 (389)
Q Consensus       336 ~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~  368 (389)
                       .             .-+|=+|.+|.++.++|.
T Consensus       252 -~-------------~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          252 -F-------------NAIYFREHGEILFEIATD  270 (335)
T ss_dssp             -S-------------EEEEEECTTSCEEEEEES
T ss_pred             -E-------------EEEEEECCCCcEEEEEeC
Confidence             0             125778899999999997

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.90  E-value=6.2e-22  Score=192.13  Aligned_cols=249  Identities=16%  Similarity=0.157  Sum_probs=171.2

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-C---CEEEEEEccCCCCCccccccCC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-G---DLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g---~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      +++.+++++||.|.|+|++++++||++.|||++....+   +    .++ ++. +   ...+.+...             
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~---~----~~~-l~~~~~~~~~~l~l~~~-------------   69 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N----TIY-LRSLEEFIHHNLVLRQG-------------   69 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S----EEE-EECTTCCSSCSEEEEEC-------------
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC---C----EEE-EEecCCCCcEEEEEEEC-------------
Confidence            45679999999999999999999999999999887542   1    123 332 3   234555431             


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCe-eccCceEEEEEEecCCeEEEEee
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPV-ILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~-~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                         ...|+.+++|+|   +|+++++++++++|+++...|. ...+..+...+++|+|..++|++
T Consensus        70 -------------------~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~  130 (323)
T 1f1u_A           70 -------------------PIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFY  130 (323)
T ss_dssp             -------------------SSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             -------------------CCCCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEE
Confidence                               123788999999   8999999999999999877665 22233356678899999999987


Q ss_pred             cCCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEE
Q 016432          178 YKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLA  256 (389)
Q Consensus       178 ~~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~  256 (389)
                      .. . ..+ +.|.  +..    ...+..+.+|+|+++.|+|++++++|| ++|||++......+      .| ....++.
T Consensus       131 ~~-~-~~~-~~~~--~~~----~~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~------~g~~~~~f~~  194 (323)
T 1f1u_A          131 ET-E-HVE-RLTQ--RYD----LYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDS------DGVTYAAWMH  194 (323)
T ss_dssp             CB-C-CCC-CCTT--CGG----GCCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECT------TCCEEEEEEE
T ss_pred             ec-c-ccc-cccc--ccc----cCCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcC------CCcEEEEEEE
Confidence            32 1 111 1121  000    113457899999999999999999999 99999987655421      23 2334444


Q ss_pred             cCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHH---HHHHHHHhcCCCCc--eecCCCChhhhHhH
Q 016432          257 NNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFR---TLREMRKRSGVGGF--EFMPSPPPTYYKNL  331 (389)
Q Consensus       257 ~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~---a~~~l~~~~~~~Gv--~~l~~P~~~YY~~l  331 (389)
                      +......+.+...                 .++|++|+||.|+|+++   ++++|+++    |+  ++...| ....   
T Consensus       195 ~~~~~~~~~~~~~-----------------~~~~~~Hiaf~v~d~d~v~~~~~~l~~~----G~~~~i~~~p-~~~~---  249 (323)
T 1f1u_A          195 RKQTVHDTALTGG-----------------NGPRMHHVAFATHEKHNIIQICDKMGAL----RISDRIERGP-GRHG---  249 (323)
T ss_dssp             SSSSSCSEEEEES-----------------SBSEEEEEEEECSSHHHHHHHHHHHHHT----TCGGGEEEEE-EECS---
T ss_pred             cCCCcccEEEeCC-----------------CCCCceEEEEECCCHHHHHHHHHHHHHC----CCccccccCC-CccC---
Confidence            4333223333221                 23489999999999998   99999999    99  887655 2100   


Q ss_pred             hhhhCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          332 KNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       332 ~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                         .+            ..-.+|=+|.+|..+.+|+...
T Consensus       250 ---~~------------~~~~~y~~DPdG~~iE~~~~~~  273 (323)
T 1f1u_A          250 ---VS------------NAFYLYILDPDGHRIEIYTQDY  273 (323)
T ss_dssp             ---TT------------CCEEEEEECTTCCEEEEEECCC
T ss_pred             ---CC------------CcEEEEEECCCCCEEEEEeCCE
Confidence               01            0112466788899999998653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.90  E-value=2e-21  Score=186.93  Aligned_cols=257  Identities=14%  Similarity=0.093  Sum_probs=171.1

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CC---EEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GD---LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~---~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+++|+||.|.|+|++++++||++.|||++..+.+  .+.    .+ ++. ++   ..+.+...               
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~----~~-l~~~~~~~~~~l~l~~~---------------   61 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGR----VY-FKCWDERDHSCYIIREA---------------   61 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSC----EE-EECTTCCBSCSEEEEEC---------------
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCe----EE-EEeccCCCceEEEEEeC---------------
Confidence            357899999999999999999999999999887642  111    22 332 32   34554431               


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCee-ccCceEEEEEEecCCeEEEEeecC
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                                       ...++.|+||.|+|   +++++++|+++|+++...|.. ..+......+++|+|..++|+...
T Consensus        62 -----------------~~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           62 -----------------DTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             -----------------SSCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             -----------------CCCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence                             12378999999996   999999999999998765542 123455778999999999999842


Q ss_pred             CCCCCCCCCCCCccCCCCCCCCc-cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEEc
Q 016432          180 DKANHLDFLPGFEPTDEISSFPL-DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLAN  257 (389)
Q Consensus       180 ~~~~~g~~lp~f~~~~~~~~~~~-~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~~  257 (389)
                      ..  .+...+...+..... ... +..+.+|+|+++.|+|++++.+||+++|||++......++     .| ....++..
T Consensus       125 ~~--~~~~~~~~~p~~~~~-~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~  196 (309)
T 3hpy_A          125 TC--VGNGISEVNPAPWNA-QREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPD-----GDSDMGIWLSC  196 (309)
T ss_dssp             CB--CCCSSCSBSCCSCCG-GGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSS-----SCSEEEEEEES
T ss_pred             ce--ecccccccCCCCCcc-ccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCC-----CCceEEEEEec
Confidence            11  111011111110000 011 3568999999999999999999999999999876544221     12 33445554


Q ss_pred             CCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhh
Q 016432          258 NDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNR  334 (389)
Q Consensus       258 ~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r  334 (389)
                      ......+.+....                ...+++|+||.|+|++   +++++|+++    |+++...| ....      
T Consensus       197 ~~~~~~~~~~~~~----------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~----G~~~~~~p-~~~~------  249 (309)
T 3hpy_A          197 SHKVHDIAFVEYP----------------EKGKLHHCSFLLESWEQVLRAGDIMSMN----EVNVDIGP-TRHG------  249 (309)
T ss_dssp             SSSSCSEEEEECS----------------STTEEEEEEEECSSHHHHHHHHHHHHHT----TCCBSSCS-EECS------
T ss_pred             CCCceeEEEecCC----------------CCCceeEEEEECCCHHHHHHHHHHHHHC----CCEEEeCC-ccCC------
Confidence            4433333333221                1345999999998865   578999999    99988776 3110      


Q ss_pred             hCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          335 AGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       335 ~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                      .+            ....+|=+|.+|.++.+++...
T Consensus       250 ~~------------~~~~~y~~DPdG~~iE~~~~g~  273 (309)
T 3hpy_A          250 VT------------RGCTIYAWDPSGNRFETFMGGY  273 (309)
T ss_dssp             SS------------SEEEEEEECTTSCEEEEEEECC
T ss_pred             CC------------ccEEEEEECCCCCEEEEEeCCc
Confidence            00            0113466788999999998853

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.89  E-value=2.3e-21  Score=185.94  Aligned_cols=255  Identities=16%  Similarity=0.128  Sum_probs=167.7

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCCCccccccCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      .+++++||.|.|+|++++++||++.|||++.....  .+.    ++ ++.+    .+.+.+...                
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~----~~-l~~~~~~~~~~l~~~~~----------------   60 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR----VY-LKAWTEVDKFSLVLREA----------------   60 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC----EE-EECTTCCBSCSEEEEEC----------------
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc----EE-EEecCCCCceEEEEccC----------------
Confidence            37899999999999999999999999999987542  121    22 2322    233333211                


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCe-eccCceEEEEEEecCCeEEEEeecCC
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPV-ILDNLAVIAEVQLYGDVVLRYVSYKD  180 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~-~~~~~~~~~~v~~~gg~~~~fve~~~  180 (389)
                                      ...++.|+||.|   +|+++++++++++|+++..+|. ...+..+...+++|+|..++|++...
T Consensus        61 ----------------~~~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           61 ----------------DEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             ----------------SSCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             ----------------CCCCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence                            123788999999   8999999999999999877664 22233456678999999999998421


Q ss_pred             CCCCCCCC-CCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceE-EEEEcC
Q 016432          181 KANHLDFL-PGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNS-VVLANN  258 (389)
Q Consensus       181 ~~~~g~~l-p~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s-~~~~~~  258 (389)
                        ..+.|. +...+.+... ...+..+.+|+|+++.|.|++++++||+++|||++.......      .|... .++...
T Consensus       125 --~~~~~~~~~~~~~~~~~-~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~------~~~~~~~~l~~~  195 (307)
T 1mpy_A          125 --YTGKWGLNDVNPEAWPR-DLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDE------NGTRVAQFLSLS  195 (307)
T ss_dssp             --BCCSTTCCSBSCCSSCS-CCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECT------TCCEEEEEEESS
T ss_pred             --hcccccccccCCcCCcc-cCCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecC------CCcEEEEEEEcC
Confidence              112221 1111110000 012456899999999999999999999999999987654311      23221 223332


Q ss_pred             CcceEEEeccCCCCCCCCchHHHHHhhcCCCC-cceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhh
Q 016432          259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG-VQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNR  334 (389)
Q Consensus       259 ~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G-vqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r  334 (389)
                      .....+.+.+.                 .+.| ++|+||.|+   |+++++++|+++    |++++..| ..+-      
T Consensus       196 ~~~~~~~~~~~-----------------~~~g~~~hi~f~v~d~~dv~~~~~~l~~~----G~~~~~~p-~~~~------  247 (307)
T 1mpy_A          196 TKAHDVAFIHH-----------------PEKGRLHHVSFHLETWEDLLRAADLISMT----DTSIDIGP-TRHG------  247 (307)
T ss_dssp             SBSCSEEEEEC-----------------SSSSEEEEEEEECSCHHHHHHHHHHHHHH----TCCEEEEE-EECS------
T ss_pred             CCceeEEEecC-----------------CCCCcceEEEEEcCCHHHHHHHHHHHHHC----CCceeeCC-ccCC------
Confidence            22112222211                 1245 899999999   678889999999    99988766 3210      


Q ss_pred             hCCCCChhhHHHHHHcCceeecCCCceEEEEeccccC
Q 016432          335 AGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVG  371 (389)
Q Consensus       335 ~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~~  371 (389)
                      .+            ....+|=+|.+|+++.+++.+..
T Consensus       248 ~~------------~~~~~~~~DPdG~~iel~~~~~~  272 (307)
T 1mpy_A          248 LT------------HGKTIYFFDPSGNRNEVFCGGDY  272 (307)
T ss_dssp             ST------------TCEEEEEECTTSCEEEEEECCCB
T ss_pred             CC------------CceEEEEECCCCcEEEEEecccc
Confidence            00            00134667888999999987643

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.88  E-value=6.7e-21  Score=181.43  Aligned_cols=250  Identities=12%  Similarity=0.065  Sum_probs=165.5

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +++|+||.|.|+|++++++||++.|||++....+   +.    .+ ++.++  ..+.+...                   
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~----~~-l~~~~~~~~l~~~~~-------------------   54 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---DA----AL-YRADQRAWRIAVQPG-------------------   54 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---TE----EE-EESSSBSCSEEEEEC-------------------
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---Ce----EE-EEcCCceEEEEEccC-------------------
Confidence            6899999999999999999999999999887542   11    22 34444  23333221                   


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCee---ccCceEEEEEEecCCeEEEEeecCCC
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVI---LDNLAVIAEVQLYGDVVLRYVSYKDK  181 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~---~~~~~~~~~v~~~gg~~~~fve~~~~  181 (389)
                                   ...++.|+||.|+   |+++++++++++|+++..+|..   ..+..+...+++|+|..++|++....
T Consensus        55 -------------~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  121 (292)
T 1kw3_B           55 -------------ELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAE  121 (292)
T ss_dssp             -------------TTCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCB
T ss_pred             -------------CCCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccc
Confidence                         1237889999998   9999999999999998777653   12345677899999999999984211


Q ss_pred             CCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC--ceEEEEEcCC
Q 016432          182 ANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG--LNSVVLANND  259 (389)
Q Consensus       182 ~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g--~~s~~~~~~~  259 (389)
                      .....+.+.    ...  ......+.+|+|+++.|+|++++++||+++|||++......+.    ..|  ....++....
T Consensus       122 ~~~~~~~~~----~~~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~~g~~~~~~~~~~~~  191 (292)
T 1kw3_B          122 IFHEPFLPS----APV--SGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQM----GPETSVPAHFLHCNG  191 (292)
T ss_dssp             CTTSCCCCS----SSC--CCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEE----ETTEEEEEEEEESSS
T ss_pred             cccCCCCCC----CCc--cccccCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeeccc----CCCccceEEEEEECC
Confidence            101111110    000  0011467899999999999999999999999999875432110    012  1223334332


Q ss_pred             cceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhhhC
Q 016432          260 EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAG  336 (389)
Q Consensus       260 g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~  336 (389)
                      ....+.+.+..                ...|++|+||.|+|++   +++++|+ +    |++++..| ....      .+
T Consensus       192 ~~~~~~~~~~~----------------~~~~~~hiaf~v~d~~~v~~~~~~l~-~----G~~~~~~p-~~~~------~~  243 (292)
T 1kw3_B          192 RHHTIALAAFP----------------IPKRIHHFMLQANTIDDVGYAFDRLD-A----AGRITSLL-GRHT------ND  243 (292)
T ss_dssp             BSCSEEEECCS----------------CSSSEEEEEEEBSSHHHHHHHHHHHH-H----TTCBCBCS-EEES------SS
T ss_pred             CcceEEEecCC----------------CCCceEEEEEEcCCHHHHHHHHHHHh-C----CCceeecC-cccC------CC
Confidence            22223332211                1357999999999865   4788999 9    99988776 3211      01


Q ss_pred             CCCChhhHHHHHHcCceeecCCCce-EEEEeccc
Q 016432          337 DVLTDEQIKQCEELGVLVDRDDQGT-LLQIFTKP  369 (389)
Q Consensus       337 ~~~~~~~~~~l~~~~IL~D~D~~g~-llqift~~  369 (389)
                                  ..-.+|=+|.+|. ++.+++..
T Consensus       244 ------------~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          244 ------------QTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             ------------CCEEEEEECSSTTCEEEEEECC
T ss_pred             ------------CeEEEEEECCCCCeeEEEEECC
Confidence                        0113466788899 99999875

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.88  E-value=4.4e-21  Score=183.40  Aligned_cols=256  Identities=13%  Similarity=0.037  Sum_probs=167.4

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEE-EecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVA-KSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~-~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      |.+++|+||.|.|+|++++++||++.|||++.. ..   .+.    . .++.++  ..+.+...                
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~----~-~~~~~~~~~~l~l~~~----------------   56 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGA----L-YLRMDDFPARLVVVPG----------------   56 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSC----E-EEESSSSSCSEEEEEC----------------
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCe----E-EEEeCCCcEEEEEecC----------------
Confidence            357899999999999999999999999999875 32   111    1 233332  34554431                


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeec---cCceEEEEEEecCCeEEEEeec
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~---~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                      ...++.|++|.|+|   +++++++|+++|+++..+|...   .+..+...+++|+|..++|++.
T Consensus        57 ----------------~~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           57 ----------------EHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             ----------------SSCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             ----------------CCCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence                            12378899999975   9999999999999987666431   2345677899999999999984


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccc--cccccC--ceEEE
Q 016432          179 KDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDV--GTSESG--LNSVV  254 (389)
Q Consensus       179 ~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~--~~~~~g--~~s~~  254 (389)
                      ........|.++   .     ..-...+.+|+|+++.|.|++++++||+++|||++......+..  .....|  ....+
T Consensus       121 ~~~~~~~~~~~~---~-----~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~  192 (300)
T 2zyq_A          121 TALEHRRVVSPY---G-----HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRF  192 (300)
T ss_dssp             CCCCCSCCCCTT---C-----CCBCCGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEE
T ss_pred             CCcCCCCCccCC---C-----cccccCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEE
Confidence            111111112111   0     00003578899999999999999999999999998754332110  000112  22333


Q ss_pred             EEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhH
Q 016432          255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNL  331 (389)
Q Consensus       255 ~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l  331 (389)
                      +........+.+.+..                ...|++|+||.|+|++   +++++|+++    |++++..| ....   
T Consensus       193 ~~~~~~~~~~~~~~~~----------------~~~g~~h~af~v~d~~~v~~~~~~l~~~----G~~~~~~p-~~~~---  248 (300)
T 2zyq_A          193 FGCNPRHHSLAFLPMP----------------TSSGIVHLMVEVEQADDVGLCLDRALRR----KVPMSATL-GRHV---  248 (300)
T ss_dssp             EESSSBSCSEEEESSC----------------CSSSEEEEEEEBSSHHHHHHHHHHHHHT----TCCEEEEE-EEES---
T ss_pred             EEECCCccEEEEecCC----------------CCCCceEEEEEeCCHHHHHHHHHHHHHC----CCceeecc-cccC---
Confidence            4443333334443321                2357999999999954   479999999    99988765 2210   


Q ss_pred             hhhhCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          332 KNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       332 ~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                         .+            ....+|=+|.+|+++.+++...
T Consensus       249 ---~~------------~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          249 ---ND------------LMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             ---SS------------CCEEEEEECTTSSEEEEEECCC
T ss_pred             ---CC------------CeEEEEEECCCCCEEEEEeCCe
Confidence               01            0123466788899999998663

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.88  E-value=2.9e-21  Score=185.37  Aligned_cols=255  Identities=13%  Similarity=0.041  Sum_probs=168.8

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+++++||.|.|+|++++++||++.|||++.....  .+.    . .++.++  ..|.|...                 
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~----~-~~~~~~~~~~l~l~~~-----------------   57 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--DDR----I-YLRMDRWHHRIVLHAD-----------------   57 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--TTE----E-EEECSSBSCSEEEECS-----------------
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--CCe----E-EEEeCCCeEEEEEEEC-----------------
Confidence            357899999999999999999999999999875221  111    2 234444  55666531                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec---cCceEEEEEEecCCeEEEEeecC
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~---~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                                     ...++.|+||.|+   |+++++++++++|+++..+|...   .+..+...+++|+|..++|++..
T Consensus        58 ---------------~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~  122 (305)
T 2wl9_A           58 ---------------GSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGP  122 (305)
T ss_dssp             ---------------SCCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEE
T ss_pred             ---------------CCCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECC
Confidence                           0237889999997   69999999999999987777532   23456778999999999998741


Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC--ceEEEEEc
Q 016432          180 DKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG--LNSVVLAN  257 (389)
Q Consensus       180 ~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g--~~s~~~~~  257 (389)
                      .......|.++.. ..    ..-...+.+|+|+++.|.|++++++|| ++|||++......+.    ..|  ....++..
T Consensus       123 ~~~~~~~~~~~~~-~~----~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~----~~g~~~~~~~~~~  192 (305)
T 2wl9_A          123 QVDTSSPFHPGRP-MF----GKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFAL----PNGAVGTPVFMHC  192 (305)
T ss_dssp             CBCTTSCCCCSSC-CS----SCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEEC----TTSCEECCEEEES
T ss_pred             CccCCCCcCCCCC-cc----cceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEeccc----CCCccceEEEEEc
Confidence            1111112322210 00    000135789999999999999999999 999999864321110    011  11233333


Q ss_pred             CCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhh
Q 016432          258 NDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNR  334 (389)
Q Consensus       258 ~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r  334 (389)
                      ......+.+....                ...|++|+||.|+|   +.+++++|+++    |++++..| ....      
T Consensus       193 ~~~~~~~~~~~~~----------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~----G~~~~~~p-~~~~------  245 (305)
T 2wl9_A          193 NDRHHSLAFGVGP----------------MDKRINHLMIEYTHLDDLGYAHDLVRQQ----KIDVTLQI-GKHS------  245 (305)
T ss_dssp             SSSSCSEEECCSC----------------CSSSEEEEEEEESSHHHHHHHHHHHHHT----TCCEEEEE-EECT------
T ss_pred             CCCceEEEEecCC----------------CCCCceEEEEEcCCHHHHHHHHHHHHHc----CCCccccC-cccC------
Confidence            3222233333221                23579999999998   67789999999    99988765 2210      


Q ss_pred             hCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          335 AGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       335 ~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                      .+            ....+|=+|.+|+++.+++...
T Consensus       246 ~~------------~~~~~y~~DPdG~~iEl~~~~~  269 (305)
T 2wl9_A          246 ND------------EALTFYCANPSGWLWEPGWGSR  269 (305)
T ss_dssp             TT------------CCEEEEEECTTSSEEEEEECCC
T ss_pred             CC------------CcEEEEEECCCCCEEEEEeCCE
Confidence            01            0113466788999999998763

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.88  E-value=7.4e-21  Score=183.58  Aligned_cols=239  Identities=13%  Similarity=0.051  Sum_probs=169.5

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC----EEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD----LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~----~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+.+++||.|.|+|++++++||++.|||++....+   +     ...++.++    ..|.|...               
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~---~-----~~~l~~~~~~~~~~l~l~~~---------------   60 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA---N-----NAWFKAQGADEHHVVQLRRA---------------   60 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS---S-----EEEEECTTSCCSCSEEEEEC---------------
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC---C-----eEEEEECCCCCCEEEEEEEC---------------
Confidence            468999999999999999999999999999886532   1     12344443    56666542               


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCee--ccCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVI--LDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~--~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                       ...++.+++|.|   +|+++++++++++|+++..+|..  ..+..+...+++|+|..++|+..
T Consensus        61 -----------------~~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  123 (310)
T 3b59_A           61 -----------------DENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSD  123 (310)
T ss_dssp             -----------------SSCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             -----------------CCCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEc
Confidence                             123788999999   79999999999999999888765  33445667799999999999883


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC
Q 016432          179 KDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN  258 (389)
Q Consensus       179 ~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~  258 (389)
                      ... . .   +.+.       ...+..+.+|+|+++.|+|++++++||+++|||++.....         + ...++...
T Consensus       124 ~~~-~-~---~~~~-------~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---------~-~~~fl~~~  181 (310)
T 3b59_A          124 VAK-G-A---KRDL-------ARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG---------D-FMCFLRCN  181 (310)
T ss_dssp             CCC-C-C---CCCC-------CTTCCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET---------T-TEEEEESS
T ss_pred             ccc-c-C---CCcc-------CCCCCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC---------C-eEEEEecC
Confidence            211 1 0   1111       0123468999999999999999999999999999875431         1 22334443


Q ss_pred             CcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHH---HHHHHHhcCCCCceecCCCChhhhHhHhhhh
Q 016432          259 DEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRT---LREMRKRSGVGGFEFMPSPPPTYYKNLKNRA  335 (389)
Q Consensus       259 ~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a---~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~  335 (389)
                      .....+.+...                 . .|++|+||.|+|+++.   +++|+++    |+++...| ..        -
T Consensus       182 ~~~~~l~l~~~-----------------~-~g~~hi~f~v~d~d~~~~~~~~l~~~----G~~~~~~p-~~--------~  230 (310)
T 3b59_A          182 SAHHRIAILPG-----------------P-PCLNHVAYDMLSVDDMMRGAHRLKVK----GIDIGWGP-GR--------H  230 (310)
T ss_dssp             SBSCSEEEEES-----------------S-SEEEEEEEECSSHHHHHHHHHHHHHT----TCCCSEEE-EE--------C
T ss_pred             CCcceEEEECC-----------------C-CceEEEEEEcCCHHHHHHHHHHHHHc----CCceeecC-cc--------c
Confidence            33333333221                 2 5799999999997665   9999999    99988766 21        1


Q ss_pred             CCCCChhhHHHHHHcCceeecCCCceEEEEeccc
Q 016432          336 GDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       336 ~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~  369 (389)
                      ..          -..-.+|=+|.+|+.+.+++..
T Consensus       231 ~~----------~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          231 TA----------GNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             ST----------TCCEEEEEECTTSCEEEEEECC
T ss_pred             cC----------CCcEEEEEECCCCCEEEEEeCc
Confidence            10          0011346677889999988865

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.87  E-value=6.5e-20  Score=178.84  Aligned_cols=269  Identities=13%  Similarity=0.100  Sum_probs=171.4

Q ss_pred             cccccCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCC
Q 016432           17 NFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPS   92 (389)
Q Consensus        17 ~~~~~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~   92 (389)
                      +|...|||+   .+.+|+||.|.|+|++++++||++.|||++.......++.. .....+..+    ++.|.+.+.....
T Consensus        18 ~~~~~~~m~---~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~l~l~~~~~~~   93 (338)
T 1zsw_A           18 LYFQSNAMY---EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEIPLVG   93 (338)
T ss_dssp             CCCSSCCSS---CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEE-EEEEEEESTTCCTTSEEEEEECTTCC
T ss_pred             cCCCcCccC---cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCc-eEEEEEcCCCCCCCCEEEEEECCCCc
Confidence            345556652   57899999999999999999999999999886541111111 112223333    4566655421110


Q ss_pred             CccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecC
Q 016432           93 ISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYG  169 (389)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~g  169 (389)
                      .                   .     .....++.|+||.|+   |+++++++++++|+++..+|. . .+.+...+++|+
T Consensus        94 ~-------------------~-----~~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~G~~~~~f~DPd  147 (338)
T 1zsw_A           94 R-------------------T-----YRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-Y-ANRPALQFEDAE  147 (338)
T ss_dssp             B-------------------C-----BCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-E-TTEEEEEEECTT
T ss_pred             c-------------------C-----cCCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-c-CCcEEEEEECCC
Confidence            0                   0     001237889999998   799999999999999876554 2 234778889999


Q ss_pred             CeEEEEeecCCCCCCCCC-CCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEeccccccccc
Q 016432          170 DVVLRYVSYKDKANHLDF-LPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSES  248 (389)
Q Consensus       170 g~~~~fve~~~~~~~g~~-lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~  248 (389)
                      |..++|++...  ..+.. .| +.+.  .  .+.+..+.+|+|+++.|.|++++++||+++|||++.....         
T Consensus       148 G~~iel~~~~~--~~~~~~~p-~~~~--~--~~~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---------  211 (338)
T 1zsw_A          148 GLRLVLLVSNG--EKVEHWET-WEKS--E--VPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND---------  211 (338)
T ss_dssp             CCEEEEEECTT--CCCTTCCC-CTTC--S--SCGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS---------
T ss_pred             CCEEEEEEcCC--ccccccCc-CcCC--C--CCccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC---------
Confidence            99999998421  11110 11 1110  0  1234568999999999999999999999999999875431         


Q ss_pred             CceEEEEEcCCcc--eEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          249 GLNSVVLANNDEM--VLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       249 g~~s~~~~~~~g~--v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      + ...+...+.+.  ..+.+....    ..       ...+..+++|+||.|+   ||++++++|+++    |+++. .|
T Consensus       212 ~-~~~~~~~~~g~~~~~~~~~~~~----~~-------~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~----G~~~~-~~  274 (338)
T 1zsw_A          212 Q-EAIFQSIKGEAFGEIVVKYLDG----PT-------EKPGRGSIHHLAIRVKNDAELAYWEEQVKQR----GFHSS-GI  274 (338)
T ss_dssp             S-EEEEESSTTCSTTCEEEEECCS----SB-------CBCCBTCEEEEEEEESSHHHHHHHHHHHHHT----TCCCC-CC
T ss_pred             C-eEEEEecCCCCceEEEEeccCC----CC-------CCCCCCceEEEEEEeCCHHHHHHHHHHHHHC----CCcee-ee
Confidence            1 11222211121  122222111    00       0112246899999999   799999999999    99885 34


Q ss_pred             ChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEeccc
Q 016432          324 PPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       324 ~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~  369 (389)
                       ...       .+             ...+|=+|.+|+++.+++..
T Consensus       275 -~~~-------~~-------------~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          275 -IDR-------FY-------------FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             -EEC-------SS-------------EEEEEEECTTCCEEEEEEEE
T ss_pred             -eec-------Cc-------------eEEEEEECCCCCEEEEEEcC
Confidence             221       01             12356678889999988753

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.87  E-value=1.7e-20  Score=179.04  Aligned_cols=250  Identities=12%  Similarity=0.051  Sum_probs=166.8

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +++|+||.|.|+|++++++||++.|||++....+   +     ...++.++  +.+.+...                   
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~-----~~~~~~~~~~~~l~~~~~-------------------   54 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---N-----GDLFRIDSRAWRIAVQQG-------------------   54 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T-----EEEEESSSBSCSEEEEEC-------------------
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC---C-----eEEEEeCCCcEEEEEecC-------------------
Confidence            6899999999999999999999999999987642   1     12334444  33444321                   


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCee---ccCceEEEEEEecCCeEEEEeecCCC
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVI---LDNLAVIAEVQLYGDVVLRYVSYKDK  181 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~---~~~~~~~~~v~~~gg~~~~fve~~~~  181 (389)
                                   ...++.|+||.|+   |+++++++++++|+++...|..   ..+..+...+++|+|..++|++....
T Consensus        55 -------------~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  121 (297)
T 1lgt_A           55 -------------EVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASE  121 (297)
T ss_dssp             -------------TTCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCB
T ss_pred             -------------CCCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccc
Confidence                         1237889999999   9999999999999998766643   12345678899999999999984211


Q ss_pred             CCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC--ceEEEEEcCC
Q 016432          182 ANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG--LNSVVLANND  259 (389)
Q Consensus       182 ~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g--~~s~~~~~~~  259 (389)
                      .....+.+   +.. .  ..-...+.+|+|+.+.|.|++++++||+++|||++......++    ..|  ....++....
T Consensus       122 ~~~~~~~~---~~~-~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~~~~~~~~~~~~~~~  191 (297)
T 1lgt_A          122 VFEKPFLP---GAA-V--SGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKM----GPDVTVPAYFLHCNE  191 (297)
T ss_dssp             CTTSCCCC---SSS-C--SCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEE----ETTEEEEEEEEESSS
T ss_pred             cccCCccC---CCc-c--cccccCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccC----CCCccceEEEEEeCC
Confidence            00011111   000 0  0001357899999999999999999999999999875432210    011  1223343333


Q ss_pred             cceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHH---HHHHHhcCCCCceecCCCChhhhHhHhhhhC
Q 016432          260 EMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTL---REMRKRSGVGGFEFMPSPPPTYYKNLKNRAG  336 (389)
Q Consensus       260 g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~---~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~  336 (389)
                      ....+.+....                ...|++|+||.|+|+++..   ++ +++    |++++..| ...-      .+
T Consensus       192 ~~~~l~l~~~~----------------~~~~~~hiaf~v~d~~~~~~~~~~-~~~----G~~~~~~p-~~~~------~g  243 (297)
T 1lgt_A          192 RHHTLAIAAFP----------------LPKRIHHFMLEVASLDDVGFAFDR-VDA----DGLITSTL-GRHT------ND  243 (297)
T ss_dssp             BSCSEEEECCC----------------CSSSEEEEEEEBSCHHHHHHHHHH-HHT----TTCEEEEE-EEES------SS
T ss_pred             CcceEEEEcCC----------------CCCCceEEEEeCCCHHHHHHHHHH-HhC----CCcccccC-cccC------CC
Confidence            33334443321                1357999999999987766   88 999    99988766 3210      01


Q ss_pred             CCCChhhHHHHHHcCceeecCCCceEEEEeccc
Q 016432          337 DVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       337 ~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~  369 (389)
                                  ..-.+|=+|.+|+++.+++..
T Consensus       244 ------------~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          244 ------------HMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             ------------CCEEEEEECTTSCEEEEEECC
T ss_pred             ------------CcEEEEEECCCCcEEEEecCC
Confidence                        001246678889999999875

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.87  E-value=1e-20  Score=181.40  Aligned_cols=258  Identities=14%  Similarity=0.074  Sum_probs=165.2

Q ss_pred             CCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--CCEEEEEEccCCCCCccccccCCC
Q 016432           25 SDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGNS  102 (389)
Q Consensus        25 ~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~~  102 (389)
                      +..+.+++++||.|.|+|++++++||++.|||++.....  .+.    .+ ++.  +...+.+...              
T Consensus         2 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~----~~-~~~~~~~~~l~l~~~--------------   60 (302)
T 2ehz_A            2 SKQAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDR----FY-LRMDYWHHRIVVHHN--------------   60 (302)
T ss_dssp             --CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SSE----EE-EESSSBSCSEEEESS--------------
T ss_pred             CCcccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Ccc----eE-EEeCCCceEEEEecC--------------
Confidence            445678999999999999999999999999999875421  111    12 222  2334554421              


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeecc---CceEEEEEEecCCeEEEEe
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILD---NLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~---~~~~~~~v~~~gg~~~~fv  176 (389)
                                        ...++.|+||.|.   |+++++++++++|+++..+|....   +..+...+++|+|..++|+
T Consensus        61 ------------------~~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~  122 (302)
T 2ehz_A           61 ------------------GQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIF  122 (302)
T ss_dssp             ------------------CCSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEE
T ss_pred             ------------------CCCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEE
Confidence                              1136789999995   799999999999999877765321   2356778899999999998


Q ss_pred             ecCCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC--ceEEE
Q 016432          177 SYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG--LNSVV  254 (389)
Q Consensus       177 e~~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g--~~s~~  254 (389)
                      ..........|.++. ...    ..-.....+|+|+++.|.|++++++|| ++|||+.......+ .   ..|  ....+
T Consensus       123 ~~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~-~---~~g~~~~~~~  192 (302)
T 2ehz_A          123 WGPRIDMSNPFHPGR-PLH----GKFVTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIP-L---PNGMTAELSF  192 (302)
T ss_dssp             EEECBCTTSCCCCSS-CCS----SCBCCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEE-C---TTSCEEEEEE
T ss_pred             ECCCccCCCCccCCC-Ccc----cceecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEecc-C---CCCcceEEEE
Confidence            732111111122210 000    000124678999999999999999999 99999986543211 0   012  12233


Q ss_pred             EEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhH
Q 016432          255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNL  331 (389)
Q Consensus       255 ~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l  331 (389)
                      +........+.+....                ...|++|+||.|+|++   +++++|+++    |++++..| ....   
T Consensus       193 ~~~~~~~~~~~~~~~~----------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~----G~~~~~~p-~~~~---  248 (302)
T 2ehz_A          193 MHCNARDHSIAFGAMP----------------AAKRLNHLMLEYTHMEDLGYTHQQFVKN----EIDIALQL-GIHA---  248 (302)
T ss_dssp             EBSSSBSCSEEECSCC----------------CSSSEEEEEEEESSHHHHHHHHHHHHHT----TCCEEEEE-EECT---
T ss_pred             EEeCCCCcEEEEecCC----------------CCCceeEEEEEcCCHHHHHHHHHHHHHC----CCcEEeCC-cccC---
Confidence            3332222223222111                1357999999999876   477899999    99988765 3210   


Q ss_pred             hhhhCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          332 KNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       332 ~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                         .+            ..-.+|=+|.+|.++.+++...
T Consensus       249 ---~~------------~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          249 ---ND------------KALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             ---TT------------CCEEEEEECTTSSEEEEEECCC
T ss_pred             ---CC------------CceEEEEECCCCcEEEEEECce
Confidence               01            0113466788899999998753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.85  E-value=1.3e-19  Score=179.23  Aligned_cols=252  Identities=16%  Similarity=0.160  Sum_probs=165.6

Q ss_pred             CCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-C---EEEEEEccCCCCCccccc
Q 016432           23 PKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-D---LRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        23 ~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-~---~~i~l~~p~~~~~~~~~~   98 (389)
                      |.++.+.|++|+||.|.|+|++++++||+++|||+++.+.+   +    .++ ++.+ +   ..+++...          
T Consensus         8 P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~----~~~-lr~~~~~~~~~l~l~~~----------   69 (365)
T 4ghg_A            8 PVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---N----QIY-LRSFEEFIHHNLVLTKG----------   69 (365)
T ss_dssp             CSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S----EEE-EECTTCCSSCSEEEEEC----------
T ss_pred             CCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---C----EEE-EEeCCCCcceEEEeccC----------
Confidence            34456779999999999999999999999999999987642   1    133 3432 2   23444421          


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEE
Q 016432           99 AGNSSASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLR  174 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~  174 (389)
                                            ...|+.++||.|.+   ++++.++|+++|+++...+... .+......+++|+|..++
T Consensus        70 ----------------------~~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iE  127 (365)
T 4ghg_A           70 ----------------------PVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYE  127 (365)
T ss_dssp             ----------------------SSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEE
T ss_pred             ----------------------CCCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEE
Confidence                                  12388999999974   8889999999999876544321 222346678899999999


Q ss_pred             EeecCCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEE
Q 016432          175 YVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVV  254 (389)
Q Consensus       175 fve~~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~  254 (389)
                      |+..  ..... ..+. . .    .......+.+|+||++.|+|++++..||++ |||++.......+     ......+
T Consensus       128 l~~~--~~~~~-~~~~-~-~----~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~-----g~~~~~f  192 (365)
T 4ghg_A          128 FFFE--TTHVE-RLHM-R-Y----DLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDE-----GTTYAAW  192 (365)
T ss_dssp             EECC--BCCCC-CCTT-C-T----TTCCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTT-----SCEEEEE
T ss_pred             EEEE--eeccc-cccc-c-c----cccccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCC-----CceeEEe
Confidence            9862  11100 1100 0 0    012234688999999999999999999975 9999886654321     1233455


Q ss_pred             EEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCcee--cCCCChhhhH
Q 016432          255 LANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEF--MPSPPPTYYK  329 (389)
Q Consensus       255 ~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~--l~~P~~~YY~  329 (389)
                      +.+......+.+..+                 .++|+||+||+|+|++   ++.++|++.    |+..  ...| .    
T Consensus       193 ~~~~~~hH~la~~~~-----------------~~~~lhHvaf~v~d~d~v~~~~d~l~~~----g~~~~i~~Gp-g----  246 (365)
T 4ghg_A          193 MHRKGTVHDTALTGG-----------------NGPRLHHVAFSTHEKHNIIQICDKMGAL----RISDRIERGP-G----  246 (365)
T ss_dssp             EESSSSSCSEEEEES-----------------SBSEEEEEEEECSSHHHHHHHHHHHHHT----TCGGGEEEEE-E----
T ss_pred             eecCCcccceeeecC-----------------CCCceeEEEEecCCHHHHHHHHHHHHhC----CCCceeEeCC-C----
Confidence            555544444444332                 2457999999999865   467788888    8742  1222 0    


Q ss_pred             hHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEeccc
Q 016432          330 NLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       330 ~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~  369 (389)
                          |=+  +.       +. --+|=+|.+|.++.+||--
T Consensus       247 ----RH~--~~-------~~-~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          247 ----RHG--VS-------NA-FYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             ----ECS--TT-------CC-EEEEEECTTCCEEEEEECC
T ss_pred             ----ccC--CC-------Cc-EEEEEECCCCceEEEEcCC
Confidence                100  00       00 1157788999999999965

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.85  E-value=1.1e-19  Score=177.30  Aligned_cols=243  Identities=13%  Similarity=0.121  Sum_probs=163.8

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC----------ceeEEEEEEEc----CCEEEEEEccCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG----------NTVHASYLLRS----GDLRFVFTAPYSPS   92 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g----------~r~~~~~~~~~----g~~~i~l~~p~~~~   92 (389)
                      .|.+++++||.|.|+|++++++||+++|||++..+....++          .++ ..+++..    +...++|..+....
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~-~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKW-SKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCE-EEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCce-EEEEEecCCCCCccEEEEeccCCCC
Confidence            45678999999999999999999999999998776543321          122 2333332    34566666542211


Q ss_pred             CccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeE
Q 016432           93 ISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVV  172 (389)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~  172 (389)
                      .                         ...+.|+.||||.|+|+   +++++++|+++...|.      ....+++|+|..
T Consensus       101 ~-------------------------~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~------~~~~~~DPdG~~  146 (330)
T 3zi1_A          101 D-------------------------YKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE------GVFETEAPGGYK  146 (330)
T ss_dssp             C-------------------------CCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET------TEEEEECTTSCE
T ss_pred             c-------------------------cccCCCeeEEEEECchH---HHHHHHcCCceeccCC------ceEEEECCCCCE
Confidence            0                         01356899999999998   5678889998865542      167789999999


Q ss_pred             EEEeecCCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceE
Q 016432          173 LRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNS  252 (389)
Q Consensus       173 ~~fve~~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s  252 (389)
                      ++|++.  ..      +.               ...++|+.+.|.|++++++||+++|||++.......       +  .
T Consensus       147 iel~~~--~~------~~---------------~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~-------~--~  194 (330)
T 3zi1_A          147 FYLQNR--SL------PQ---------------SDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK-------Q--R  194 (330)
T ss_dssp             EEEESS--CC------TT---------------SCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT-------T--E
T ss_pred             EEEEec--CC------CC---------------CCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC-------c--E
Confidence            999983  10      00               123789999999999999999999999998654321       1  2


Q ss_pred             EEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHh
Q 016432          253 VVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKN  330 (389)
Q Consensus       253 ~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~  330 (389)
                      .++...+..+.|.+.....   .         ...+.++.|+||.|+  |+++++++|+++    |++++..| ..+-  
T Consensus       195 ~~l~~g~~~~~l~l~~~~~---~---------~~~~~~~~hiaf~v~~~dld~~~~rl~~~----G~~i~~~~-~~~~--  255 (330)
T 3zi1_A          195 ALLGYADNQCKLELQGVKG---G---------VDHAAAFGRIAFSCPQKELPDLEDLMKRE----NQKILTPL-VSLD--  255 (330)
T ss_dssp             EEEESSTTSCEEEEEECSS---C---------CCCBTTCCEEEEEECGGGHHHHHHHHHHT----TCEEEEEE-EEEC--
T ss_pred             EEEEeCCceEEEEECCCCC---C---------CCCCCCCceEEEEEEcccHHHHHHHHHHc----CCcEecCc-eecc--
Confidence            3455555555566543320   0         013467899999994  899999999999    99988765 3210  


Q ss_pred             HhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEecc
Q 016432          331 LKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTK  368 (389)
Q Consensus       331 l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~  368 (389)
                      ...+.+             ...+|=+|.+|+++.+++.
T Consensus       256 ~pg~~g-------------~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          256 TPGKAT-------------VQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             CTTSCC-------------EEEEEEECTTCCEEEEEEH
T ss_pred             cCCCCc-------------eEEEEEECCCCCEEEEEEe
Confidence            000001             0244556777877777664

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.82  E-value=2.9e-18  Score=163.41  Aligned_cols=249  Identities=14%  Similarity=0.079  Sum_probs=159.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCE-EEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDL-RFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~-~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ...+.||+|.|+|++++++||+++|||+...... +.+.  .....+..++. ...+.... +..               
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~--~~~~~~~~~g~~~~~l~~~~-~~~---------------   90 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGG--GVYSMATLNGEAVAAIAPMP-PGA---------------   90 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC--------CCEEEEEETTEEEEEEEECC-SCC---------------
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCc--cCEEEEEeCCeeeEeeccCC-CCC---------------
Confidence            3479999999999999999999999999876532 1110  01233444443 22333211 110               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCCCCCCCCCC
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFL  188 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~~~~~g~~l  188 (389)
                          +      ....+..+++|.|+|+++++++++++|++++.+|....+..+.+.+++|+|..+.|++....       
T Consensus        91 ----~------~~~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~~-------  153 (282)
T 3oxh_A           91 ----P------EGMPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANRH-------  153 (282)
T ss_dssp             -------------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESSC-------
T ss_pred             ----C------CCCCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcccc-------
Confidence                0      01224467999999999999999999999988887654455788999999999999984211       


Q ss_pred             CCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEecc
Q 016432          189 PGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNE  268 (389)
Q Consensus       189 p~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e  268 (389)
                      .++..         ......++|+.+.|.|++++.+||+++|||+.......+       +.....+......+...+..
T Consensus       154 ~~~~~---------~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  217 (282)
T 3oxh_A          154 IGATL---------VNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAA-------GQNYRVLKAGDAEVGGCMEP  217 (282)
T ss_dssp             CSCSB---------CSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC--------------CEEEEETTEEEEEEECC
T ss_pred             CCccc---------cCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCC-------CcceEEEEcCCccEeeecCC
Confidence            11111         012357999999999999999999999999986432010       11112222222222111111


Q ss_pred             CCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHH
Q 016432          269 PVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCE  348 (389)
Q Consensus       269 ~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~  348 (389)
                      +.               ...++-.|++|.|+||++++++++++    |++++..| ...-      .+            
T Consensus       218 ~~---------------~~~~~~~~~~~~v~dvd~~~~~~~~~----G~~~~~~p-~~~~------~~------------  259 (282)
T 3oxh_A          218 PM---------------PGVPNHWHVYFAVDDADATAAKAAAA----GGQVIAEP-ADIP------SV------------  259 (282)
T ss_dssp             SS---------------TTCCSEEEEEEECSCHHHHHHHHHHT----TCEEEEEE-EEET------TT------------
T ss_pred             CC---------------CCCCCeEEEEEEeCCHHHHHHHHHHc----CCEEecCC-eEcC------CC------------
Confidence            10               02235689999999999999999999    99998876 3210      00            


Q ss_pred             HcCceeecCCCceEEEEeccc
Q 016432          349 ELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       349 ~~~IL~D~D~~g~llqift~~  369 (389)
                       ..+.+=+|.+|.++.+++.+
T Consensus       260 -~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          260 -GRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             -EEEEEEECTTSCEEEEEEEC
T ss_pred             -eEEEEEECCCCCEEEEEecC
Confidence             12334566778777777643

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.70  E-value=4.4e-16  Score=135.38  Aligned_cols=129  Identities=16%  Similarity=0.232  Sum_probs=105.4

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      .+.+|+||.|.|+|++++++||++.|||++......+.+.  .....++.|+..|+|.++..+.                
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~--~~~~~~~~g~~~l~l~~~~~~~----------------   66 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQG--VKIAFLEIGESKIELLEPLSEE----------------   66 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGT--EEEEEEEETTEEEEEEEESSTT----------------
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCC--eEEEEEeCCCeEEEEEeECCCC----------------
Confidence            4789999999999999999999999999988764322211  2466677899999998875443                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCC-CeeccCceEEEEEE--ecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP-PVILDNLAVIAEVQ--LYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~-P~~~~~~~~~~~v~--~~gg~~~~fve~  178 (389)
                         .....++..++.|+.||||.|+|+++++++|+++|++++.+ |....+...+..++  +|+|..++|+++
T Consensus        67 ---~~~~~~~~~~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~  136 (161)
T 3oa4_A           67 ---SPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEK  136 (161)
T ss_dssp             ---SHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEEC
T ss_pred             ---ChHHHHhhcCCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEec
Confidence               25667888889999999999999999999999999999887 66544456677774  899999999995

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.67  E-value=4.4e-16  Score=134.59  Aligned_cols=131  Identities=14%  Similarity=0.135  Sum_probs=104.5

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC---------C---ceeEEEEEEEcCCEEEEEEccCCCCCc
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST---------G---NTVHASYLLRSGDLRFVFTAPYSPSIS   94 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~---------g---~r~~~~~~~~~g~~~i~l~~p~~~~~~   94 (389)
                      .+.+.+|+||.+.|+|++++++||++.|||++..+...+.         |   .....+.+++.|+..|+|.++..+.  
T Consensus        14 ~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~--   91 (159)
T 3gm5_A           14 ILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENP--   91 (159)
T ss_dssp             CCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSS--
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCC--
Confidence            4468999999999999999999999999999765332211         0   0123466778899999999875433  


Q ss_pred             cccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecC--CeE
Q 016432           95 DAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYG--DVV  172 (389)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~g--g~~  172 (389)
                                       ....+++..++.|+.||||.|+|+++++++|+++|++++.++..  ...++..+++++  |..
T Consensus        92 -----------------~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~dpd~~G~~  152 (159)
T 3gm5_A           92 -----------------STWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF--EGGRYAYIDTLRALKVM  152 (159)
T ss_dssp             -----------------CHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE--TTEEEEEESCHHHHSSE
T ss_pred             -----------------ChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc--CCeeEEEEeccccCcEE
Confidence                             25677888889999999999999999999999999998776543  346788898888  999


Q ss_pred             EEEeec
Q 016432          173 LRYVSY  178 (389)
Q Consensus       173 ~~fve~  178 (389)
                      ++|+++
T Consensus       153 iEl~e~  158 (159)
T 3gm5_A          153 IELLEN  158 (159)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            999984

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.67  E-value=5.9e-16  Score=129.19  Aligned_cols=125  Identities=15%  Similarity=0.130  Sum_probs=99.1

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEe--cCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKS--DLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~--~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      ++++++||.+.|+|++++++||+ .|||++..+.  ....+   ....+++.|+..|+|.++..+.+             
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~-------------   66 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRK---VYIQFVINGGYRVELVAPDGEDS-------------   66 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTT---EEEEEEEETTEEEEEEEESSTTC-------------
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcc---eEEEEEeCCCEEEEEEecCCCCC-------------
Confidence            47899999999999999999999 9999986542  12222   23566677999999988754431             


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCee--ccCceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI--LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~--~~~~~~~~~v~~~gg~~~~fve  177 (389)
                            ...+++.. +.|+.||||.|+|+++++++|+++|++++.+|..  ..+..++.++++|+|..++|++
T Consensus        67 ------~~~~~~~~-~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           67 ------PINKTIKK-GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             ------THHHHTTT-SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             ------hHHHHHhc-CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence                  34556655 7799999999999999999999999998876543  2345678899999999999987

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.64  E-value=5e-15  Score=125.25  Aligned_cols=130  Identities=15%  Similarity=0.208  Sum_probs=101.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC------EEEEEEccCCCCCccccccCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD------LRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~------~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ..+.+++||.|.|+|++++++||++.|||++......+++.  .....++.++      ..|.|.++..+.         
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~l~l~~~~~~~---------   73 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQG--VVEIMMAPAAKLTEHMTQVQVMAPLNDE---------   73 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTT--EEEEEEESSSSCCTTCCEEEEEEESSTT---------
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCC--eEEEEEEcCCCCcCcceEEEEeecCCCC---------
Confidence            35799999999999999999999999999988764322211  2355667666      788888764332         


Q ss_pred             CCCCCCCCChHHHHHHHHhcC--CceeEEEEEEcCHHHHHHHHHHCCCccc-CCCeeccCceEEEEE--EecCCeEEEEe
Q 016432          102 SSASLPTFDHAACRSFAASHG--LAARSIAVEVEDADVAFNTSVAHGAKPS-SPPVILDNLAVIAEV--QLYGDVVLRYV  176 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg--~gv~~iaf~V~Dvda~~~~a~a~Ga~~i-~~P~~~~~~~~~~~v--~~~gg~~~~fv  176 (389)
                                .+...++..++  .|+.|+||.|+|+++++++++++|++++ .+|........+..+  ++|+|..++|+
T Consensus        74 ----------~~~~~~~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~  143 (148)
T 1jc4_A           74 ----------STVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELT  143 (148)
T ss_dssp             ----------SHHHHHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEE
T ss_pred             ----------ChHHHHHHhCCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEE
Confidence                      24566777787  7999999999999999999999999988 456653345566777  78999999998


Q ss_pred             ec
Q 016432          177 SY  178 (389)
Q Consensus       177 e~  178 (389)
                      +.
T Consensus       144 ~~  145 (148)
T 1jc4_A          144 QY  145 (148)
T ss_dssp             EC
T ss_pred             ec
Confidence            74

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.61  E-value=3.1e-15  Score=129.20  Aligned_cols=128  Identities=13%  Similarity=0.123  Sum_probs=89.1

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      .++|+||.|+|+|+++|++||+++|||++....+.. +.++............+++..+.....                
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~----------------   86 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG-ADRWLTVVSPEAPDGTQLLLEPSSHAA----------------   86 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEET-TEEEEEEECTTCTTSCEEEEEECCSTT----------------
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCC-CceEEEEeccCCCcceEEEeccCCCcc----------------
Confidence            368999999999999999999999999987664422 223221111111223333333322110                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                         .........+.|..+++|.|+|+++++++++++|++++.+|...++ .+.+.+++|+|..++|+|.
T Consensus        87 ---~~~~~~~~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~-g~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A           87 ---VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP-VVTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             ---HHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSS-CEEEEEECSSSCEEEEEEC
T ss_pred             ---ccccccccccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCC-eEEEEEECCCCCEEEEEEE
Confidence               1111112235578899999999999999999999999988887544 4678899999999999984

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.61  E-value=2.3e-14  Score=134.53  Aligned_cols=158  Identities=8%  Similarity=-0.001  Sum_probs=116.3

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+.+++|+||.+.|+|++++++||++.|||+++...+    .    .+.++.|+..+.|.....                
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~----~~~L~~g~~~l~l~~~~~----------------   76 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----D----AFTIQLGVSQIQFRAAAD----------------   76 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----S----EEEEEETTEEEEEEECCT----------------
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----C----EEEEEeCCEEEEEEECCC----------------
Confidence            3457999999999999999999999999999887642    1    234556887777765311                


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCC-Cee----ccCceEEEEEEecCCeEEEEeecC
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSP-PVI----LDNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~-P~~----~~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                                    .+.++.++||+|+  |+++++++++++ +++..+ |..    .....+...+++|+|..++|+.+.
T Consensus        77 --------------~~~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           77 --------------GTKPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             --------------TCCCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             --------------CCCCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence                          1236889999986  699999999999 887652 321    234567888999999999999842


Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeE
Q 016432          180 DKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFA  236 (389)
Q Consensus       180 ~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~  236 (389)
                      ..   ..|..  .       ...+..+++++||++.|+|++++.+|| ++|||+...
T Consensus       142 ~~---~~~~~--~-------~~~~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~  185 (252)
T 3pkv_A          142 QA---APVLD--K-------PFSADQLLSIGEINITTSDVEQAATRL-KQAELPVKL  185 (252)
T ss_dssp             SS---SCCCC--S-------CCCGGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCG
T ss_pred             CC---Ccccc--C-------CCCHHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCccc
Confidence            11   11111  0       112346899999999999999999999 999999863

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.60  E-value=1.2e-14  Score=120.04  Aligned_cols=127  Identities=15%  Similarity=0.165  Sum_probs=95.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+|+||.|.|+|++++++||++.|||++......+++  ......++.|+..+.|..+..+.+                
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~----------------   64 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEH--GVSVVFVNLGNTKMELLHPLGLDS----------------   64 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGG--TEEEEEEECSSSEEEEEEECSTTC----------------
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCC--CEEEEEEecCCEEEEEEecCCCCc----------------
Confidence            68999999999999999999999999998754321111  124566778888888877643321                


Q ss_pred             ChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCC-eeccCceEEEEE--EecCCeEEEEee
Q 016432          110 DHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPP-VILDNLAVIAEV--QLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P-~~~~~~~~~~~v--~~~gg~~~~fve  177 (389)
                         +...++..+ +.|+.|+||.|+|+++++++++++|++++.+| ...........+  ++|+|..++|++
T Consensus        65 ---~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           65 ---PIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             ---TTHHHHHHCTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             ---hhhhhhhccCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence               233455554 45899999999999999999999999988774 333334556666  789999888876

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.59  E-value=7.4e-14  Score=115.26  Aligned_cols=129  Identities=14%  Similarity=0.128  Sum_probs=95.6

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccC-----CCCCccccccCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPY-----SPSISDAADAGNS  102 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~-----~~~~~~~~~~~~~  102 (389)
                      |.+++|+||.|.|+|++++++||++.|||++.......++.  .....++.|+..+.|..+.     .+...        
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~--------   70 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRH--DYKLDLKCGDIELEIFGNKLTDSNYCAPP--------   70 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTT--EEEEEEEETTEEEEEEECCTTSTTCCCCC--------
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCc--ceEEEEecCCeEEEEEecccccccccCCc--------
Confidence            35789999999999999999999999999998765322222  2245677788888887732     11100        


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                        ..+.+         ..++.|+.|+||.|+|+++++++++++|+++..+|....+..+...+++|+|..++|+|
T Consensus        71 --~~~~~---------~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           71 --ERISW---------PREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             --CCCCS---------SSCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             --cccCC---------CCCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence              00000         01455899999999999999999999999998777664455678889999999998875

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.58  E-value=5.9e-15  Score=127.44  Aligned_cols=112  Identities=19%  Similarity=0.296  Sum_probs=86.4

Q ss_pred             ccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccc-------ccc--ccCceEEEEEcCCcceEEEeccCCCC
Q 016432          202 LDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDV-------GTS--ESGLNSVVLANNDEMVLLPMNEPVFG  272 (389)
Q Consensus       202 ~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~-------~~~--~~g~~s~~~~~~~g~v~l~l~e~~~~  272 (389)
                      .+..+.+|+|+++.|.|++++++||+++|||++......++.       ...  ..+.+..++..  +...|+|.++.  
T Consensus        13 ~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--g~~~leL~~~~--   88 (159)
T 3gm5_A           13 NILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL--GPLQLELIEPD--   88 (159)
T ss_dssp             SCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE--TTEEEEEEEEC--
T ss_pred             cccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec--CCEEEEEEEEC--
Confidence            345789999999999999999999999999997654332210       000  12344455544  46778888775  


Q ss_pred             CCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          273 TKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       273 ~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ...+.+.+|++.+ +.|++||||.|+||++++++|+++    |++++..|
T Consensus        89 -~~~~~~~~~l~~~-~~g~~Hiaf~v~di~~~~~~l~~~----G~~~~~~~  133 (159)
T 3gm5_A           89 -ENPSTWREFLDKN-GEGIHHIAFVVKDMDRKVEELYRK----GMKVIQKG  133 (159)
T ss_dssp             -SSSCHHHHHHHHH-CSEEEEEEEECSCHHHHHHHHHHT----TCCEEEEE
T ss_pred             -CCCChhHHHhhcC-CceEEEEEEEcCCHHHHHHHHHHC----CCcEeecc
Confidence             4567888898874 789999999999999999999999    99998765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.56  E-value=1.3e-14  Score=121.00  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=80.8

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+ +|||++......    .+..+.+..++..  +...|+|.++.   ...+.+.++++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~----~~~~~~~~~~~~~--~~~~l~l~~~~---~~~~~~~~~~~   73 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVR----DEVRKVYIQFVIN--GGYRVELVAPD---GEDSPINKTIK   73 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEE----ETTTTEEEEEEEE--TTEEEEEEEES---STTCTHHHHTT
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceec----cCCcceEEEEEeC--CCEEEEEEecC---CCCChHHHHHh
Confidence            57899999999999999999999 999998643211    0123455555554  45678887775   34566777877


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .  +.|++||||.|+||++++++|+++    |++++..|
T Consensus        74 ~--~~g~~hiaf~v~di~~~~~~l~~~----G~~~~~~p  106 (133)
T 3hdp_A           74 K--GSTPYHICYEVEDIQKSIEEMSQI----GYTLFKKA  106 (133)
T ss_dssp             T--SCEEEEEEEEESCHHHHHHHHTTT----TEEEEEEE
T ss_pred             c--CCceEEEEEEcCCHHHHHHHHHHc----CCccccCC
Confidence            6  679999999999999999999999    99998765

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.55  E-value=7.4e-14  Score=121.21  Aligned_cols=103  Identities=17%  Similarity=0.316  Sum_probs=83.6

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+++.|.|++++++||+++|||++......+     ..+.+..++..  +...|+|.++.   ...+.+.+|+.
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~--g~~~l~l~~~~---~~~~~~~~~~~   74 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLP-----SQGVKIAFLEI--GESKIELLEPL---SEESPIAKFIQ   74 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEG-----GGTEEEEEEEE--TTEEEEEEEES---STTSHHHHHHH
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccC-----CCCeEEEEEeC--CCeEEEEEeEC---CCCChHHHHhh
Confidence            4689999999999999999999999999987654422     23455556655  44677887775   34567788887


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPS  322 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~  322 (389)
                      . .+.|++||||.|+||++++++|+++    |++++..
T Consensus        75 ~-~~~g~~Hiaf~V~Did~~~~~l~~~----G~~~~~~  107 (161)
T 3oa4_A           75 K-RGEGIHHIAIGVKSIEERIQEVKEN----GVQMIND  107 (161)
T ss_dssp             H-HCSEEEEEEEECSCHHHHHHHHHHT----TCCBSCS
T ss_pred             c-CCCCeEEEEEEECCHHHHHHHHHHC----CCEeccc
Confidence            7 4689999999999999999999999    9999887

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.55  E-value=1.9e-13  Score=113.18  Aligned_cols=122  Identities=13%  Similarity=0.085  Sum_probs=93.4

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +++.+++||.|.|+|++++++||++.|||++......+.+.+   ...+.  .++..|.+..+.....            
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~------------   73 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMR---FVTVVPPGAQTQVALGLPSWYED------------   73 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEE---EEEEECTTCSCEEEEECGGGCSS------------
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCce---EEEEECCCCceEEEEecCccccc------------
Confidence            358999999999999999999999999999987653222322   23333  3467788876431100            


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   .....+..|++|.|+|+++++++++++|++++.+|...+...+...+++|+|..++|++
T Consensus        74 -------------~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           74 -------------GRKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             -------------CCCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             -------------ccCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence                         00224788999999999999999999999998888776555578899999999999886

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.52  E-value=2.9e-13  Score=111.62  Aligned_cols=105  Identities=21%  Similarity=0.395  Sum_probs=81.8

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||+.......+     ..+....++..++  ..+.|..+.   ...+....++.
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~l~~~~---~~~~~~~~~~~   71 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLP-----EHGVSVVFVNLGN--TKMELLHPL---GLDSPIAGFLQ   71 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEG-----GGTEEEEEEECSS--SEEEEEEEC---STTCTTHHHHH
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecC-----CCCEEEEEEecCC--EEEEEEecC---CCCchhhhhhh
Confidence            5789999999999999999999999999987644321     1355556666543  455555544   23445667777


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+.|++||||.|+|+++++++|+++    |++++..|
T Consensus        72 ~~~~~g~~hi~~~v~d~~~~~~~l~~~----G~~~~~~~  106 (134)
T 3rmu_A           72 KNKAGGMHHICIEVDNINAAVMDLKKK----KIRSLSEE  106 (134)
T ss_dssp             HCTTCEEEEEEEEESCHHHHHHHHHHT----TCTTBCCC
T ss_pred             ccCCCCceEEEEEcCCHHHHHHHHHHc----CCcccCCC
Confidence            767789999999999999999999999    99988765

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.50  E-value=1.3e-13  Score=117.14  Aligned_cols=131  Identities=15%  Similarity=0.219  Sum_probs=94.2

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC---------CceeEEEEEEEc--CCEEEEEEccCCCCCcccc
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST---------GNTVHASYLLRS--GDLRFVFTAPYSPSISDAA   97 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~---------g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~   97 (389)
                      .+++|+||.|.|+|++++++||++ |||++......+.         .........++.  |+..|.|.++..+..... 
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~-   85 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD-   85 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB-
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc-
Confidence            589999999999999999999999 9999886532110         001233556665  337777766432221000 


Q ss_pred             ccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432           98 DAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                       ..+....+.|+.|+||.|+|+++++++++++|++++.+|....+..+...+++|+|..++|++
T Consensus        86 -----------------~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  148 (153)
T 1ss4_A           86 -----------------HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  148 (153)
T ss_dssp             -----------------CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             -----------------ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEe
Confidence                             000011345889999999999999999999999998888665456678889999999999988


Q ss_pred             c
Q 016432          178 Y  178 (389)
Q Consensus       178 ~  178 (389)
                      +
T Consensus       149 ~  149 (153)
T 1ss4_A          149 E  149 (153)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.50  E-value=2.6e-13  Score=111.03  Aligned_cols=126  Identities=14%  Similarity=0.100  Sum_probs=91.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |++.+++||.|.|+|++++++||++.|||++........+..  ....++.++..+.|.....+...            +
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~l~l~~~~~~~~~------------~   66 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKND--IKLDLKLGSQELEIFISDQFPAR------------P   66 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTE--EEEEEEETTEEEEEEECTTCCCC------------C
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcc--eEEEEecCCeEEEEEeccCCCCC------------C
Confidence            357899999999999999999999999999886532111111  12335666668877764222110            0


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      .          ...+.|..|++|.|+|+++++++++++|+++..+|...........+++|+|..++|++
T Consensus        67 ~----------~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           67 S----------YPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             C----------SSCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             C----------CCCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            0          01345788999999999999999999999987766644445577888999999998874

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.49  E-value=6.1e-13  Score=110.50  Aligned_cols=121  Identities=17%  Similarity=0.139  Sum_probs=91.1

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCCCccccccCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      ++++||.|.|+|++++++||++.|||++......+++.  .....++.+    +..|.|..+..+..             
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~-------------   65 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYK--YSLAFVGYGPETEEAVIELTYNWGVDK-------------   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTT--EEEEEEESSCTTTSCEEEEEEETTCCC-------------
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCc--eEEEEEecCCCCCCcEEEEEEcCCCCc-------------
Confidence            47999999999999999999999999988765322222  123445544    46777775432210             


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCc-eEEEEEEecCCeEEEEeec
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNL-AVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~-~~~~~v~~~gg~~~~fve~  178 (389)
                                  ...+.++.|++|.|+|+++++++++++|++++.+|...... .....+++|+|..++|++.
T Consensus        66 ------------~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~  126 (135)
T 1f9z_A           66 ------------YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  126 (135)
T ss_dssp             ------------CCCCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC
T ss_pred             ------------ccCCCCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEec
Confidence                        01345888999999999999999999999998877654433 3577889999999999984

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.48  E-value=4.3e-13  Score=113.21  Aligned_cols=105  Identities=24%  Similarity=0.430  Sum_probs=82.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc----ceEEEeccCCCCCCCCchHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE----MVLLPMNEPVFGTKRKSQIQ  280 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g----~v~l~l~e~~~~~~~~s~i~  280 (389)
                      ++.+|+|+++.|.|++++++||+++|||+.......+     ..+....++..+++    ...|.|.++.   ...+.+.
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~l~l~~~~---~~~~~~~   77 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENP-----EQGVVEIMMAPAAKLTEHMTQVQVMAPL---NDESTVA   77 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEET-----TTTEEEEEEESSSSCCTTCCEEEEEEES---STTSHHH
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCC-----CCCeEEEEEEcCCCCcCcceEEEEeecC---CCCChHH
Confidence            6789999999999999999999999999987654321     12445566666543    2678887765   3345677


Q ss_pred             HHHhhcCC-CCcceEEEEeCCHHHHHHHHHHhcCCCCceecC
Q 016432          281 TYLEHNEG-AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       281 ~fl~~~~g-~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      +|+..+++ .|++|+||.|+||++++++|+++    |++++.
T Consensus        78 ~~~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~----G~~~~~  115 (148)
T 1jc4_A           78 KWLAKHNGRAGLHHMAWRVDDIDAVSATLRER----GVQLLY  115 (148)
T ss_dssp             HHHHHTTTCCEEEEEEEECSCHHHHHHHHHHH----TCCBSC
T ss_pred             HHHHhCCCCCceEEEEEECCCHHHHHHHHHHC----CCeecC
Confidence            78776432 78999999999999999999999    999984

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.47  E-value=8.9e-13  Score=109.05  Aligned_cols=122  Identities=13%  Similarity=0.123  Sum_probs=93.6

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+.+.+++||.|.|+|++++++||++.|||++....+   +     ...++.|+..+.|.....+.. +.          
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~---~-----~~~~~~~~~~~~l~~~~~~~~-~~----------   65 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA---G-----RIALEFGHQKINLHQLGNEFE-PK----------   65 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT---T-----EEEEEETTEEEEEEETTSCCS-SC----------
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC---C-----eEEEEcCCEEEEEEcCCCCcc-cc----------
Confidence            3568899999999999999999999999999987632   1     344566888888876532210 00          


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcC-HHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEeec
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVED-ADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~D-vda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve~  178 (389)
                            .     ...+.|..|++|.|+| +++++++++++|++++.+|....+   ......+++|+|..++|+++
T Consensus        66 ------~-----~~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~  130 (133)
T 3ey7_A           66 ------A-----QNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTY  130 (133)
T ss_dssp             ------C-----TTCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEES
T ss_pred             ------C-----CCCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEec
Confidence                  0     1134578999999997 999999999999999887754332   23678899999999999984

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.46  E-value=6.9e-13  Score=131.95  Aligned_cols=113  Identities=14%  Similarity=0.164  Sum_probs=90.3

Q ss_pred             CCCCcceEEEEEEEeCC--HHHHHHHHHHhcCCcEEEEec---CCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccc
Q 016432           26 DRFRVNRFHHVEFWCTD--ATNTARRFSWGLGMPIVAKSD---LSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D--~~~a~~fy~~~lGF~~~~~~~---~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~   98 (389)
                      +..++.+|+||+++|+|  ++++++||.+.|||++.+..+   ..+......+.++.  .|.++|.|++|....  ..  
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~--~~--  242 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGK--KK--  242 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCS--BC--
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCC--CC--
Confidence            34578999999999998  999999999999999987643   22211233445554  467999999986411  00  


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCee
Q 016432           99 AGNSSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI  155 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~  155 (389)
                                   +++.+|++.+ |+|++||||.|+|+++++++|+++|++++..|..
T Consensus       243 -------------s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~~  287 (393)
T 3isq_A          243 -------------SQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPST  287 (393)
T ss_dssp             -------------CHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCHH
T ss_pred             -------------CHHHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCcc
Confidence                         3899999998 8899999999999999999999999999988755

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.42  E-value=2.5e-12  Score=109.77  Aligned_cols=123  Identities=12%  Similarity=0.090  Sum_probs=91.6

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      ..+.+.+|+||.|.|+|++++++||++.|||++....+   +     ...++.|+..+.|.....+.. +..        
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~---~-----~~~l~~~~~~l~l~~~~~~~~-~~~--------   79 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ---N-----RKALIFGAQKINLHQQEMEFE-PKA--------   79 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT---T-----EEEEEETTEEEEEEETTBCCS-SCC--------
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC---C-----eEEEEeCCeEEEEeccCCcCC-CcC--------
Confidence            34678999999999999999999999999999987632   1     234566888887776432210 000        


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEc-CHHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEeec
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVE-DADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~-Dvda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve~  178 (389)
                                   .....|..|++|.|+ |+++++++++++|++++.+|....+   ..+...+++|+|..+++++.
T Consensus        80 -------------~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~  143 (152)
T 3huh_A           80 -------------SRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQY  143 (152)
T ss_dssp             -------------SSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             -------------cCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEec
Confidence                         012347889999998 9999999999999999887754322   24677899999999999884

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.41  E-value=3e-12  Score=107.25  Aligned_cols=124  Identities=18%  Similarity=0.132  Sum_probs=91.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+++|+||.|.|+|++++++||++.|||++.......++ . .....++ |+..|.|.++..+..             +
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~-~-~~~~~~~-~~~~l~l~~~~~~~~-------------~   64 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTT-S-FAHGVLP-GGLSIVLREHDGGGT-------------D   64 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSE-E-EEEEECT-TSCEEEEEEETTCSS-------------S
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-c-eEEEEEc-CCCEEEEEeCCCCcc-------------c
Confidence            3578999999999999999999999999998876532111 1 2233445 788888877532210             0


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                      .+         ...+.|+.++||.|   +|+++++++++++|+++. +|...... +...+++|+|..++|++.
T Consensus        65 ~~---------~~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~g-~~~~~~DPdG~~iel~~~  127 (136)
T 2rk0_A           65 LF---------DETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT-PTQELPFG-WILAFRDADNIALEAMLG  127 (136)
T ss_dssp             CC---------CTTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBC-CCEEETTE-EEEEEECTTCCEEEEEEE
T ss_pred             CC---------CCCCCCcceEEEEeCCHHHHHHHHHHHHHCCCccc-CccccCCc-eEEEEECCCCCEEEEEEc
Confidence            00         11345889999999   899999999999999976 44443333 677889999999999984

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.41  E-value=2.8e-12  Score=108.60  Aligned_cols=120  Identities=19%  Similarity=0.180  Sum_probs=87.8

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+.+++||.|.|+|++++++||++.|||++......+++.  .....++.+    +..|.|.++..+..          
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~~~~~----------   71 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDK--YTLVFLGYGPEMSSTVLELTYNYGVTS----------   71 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGT--EEEEEEESSCTTTSCEEEEEEETTCCC----------
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCC--eEEEEEEcCCCCCceEEEEEecCCCCC----------
Confidence            45789999999999999999999999999998754322221  123445554    37788876532210          


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                     ...+.++.|++|.|+|+++++++++++|++++.+    .+...++.+++|+|..++|++.
T Consensus        72 ---------------~~~~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~----~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           72 ---------------YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE----DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             ---------------CCCCSSEEEEEEEESCHHHHHHHHHHTTCCEEEE----CSSSSEEEEECTTSCEEEEEEH
T ss_pred             ---------------CCCCCCceEEEEEeCCHHHHHHHHHHCCCEEecc----CCcEEEEEEECCCCCEEEEEEc
Confidence                           0134588999999999999999999999987654    2223355889999999999883

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.41  E-value=3e-13  Score=115.05  Aligned_cols=129  Identities=10%  Similarity=-0.008  Sum_probs=92.6

Q ss_pred             CCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--------CCceeEEEEEEEcC-CEEEEEEccCCCCCcc
Q 016432           25 SDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--------TGNTVHASYLLRSG-DLRFVFTAPYSPSISD   95 (389)
Q Consensus        25 ~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--------~g~r~~~~~~~~~g-~~~i~l~~p~~~~~~~   95 (389)
                      ++.+.+.+|+||.|.|+|++++++||++.|||++......+        .+.    ...++.+ +..+.|........ .
T Consensus        12 ~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~-~   86 (156)
T 3kol_A           12 LAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGK----VANFITPDGTILDLFGEPELSP-P   86 (156)
T ss_dssp             CCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTS----EEEEECTTSCEEEEEECTTCCC-S
T ss_pred             cCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCc----EEEEEeCCCCEEEEEecCCCCc-C
Confidence            34567899999999999999999999999999987632111        111    2344554 47777776432210 0


Q ss_pred             ccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEE
Q 016432           96 AADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVL  173 (389)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~  173 (389)
                      .        .           .......+..|+||.|+  |+++++++++++|++++.+|...... ....+++|+|..+
T Consensus        87 ~--------~-----------~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG~~i  146 (156)
T 3kol_A           87 D--------P-----------NPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG-RGVYFYDPDGFMI  146 (156)
T ss_dssp             S--------S-----------STTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CC-EEEEEECTTSCEE
T ss_pred             C--------C-----------CCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCc-cEEEEECCCCCEE
Confidence            0        0           00113458999999999  99999999999999988777664333 4788999999999


Q ss_pred             EEeec
Q 016432          174 RYVSY  178 (389)
Q Consensus       174 ~fve~  178 (389)
                      +|+.+
T Consensus       147 el~~~  151 (156)
T 3kol_A          147 EIRCD  151 (156)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99884

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.40  E-value=1.3e-12  Score=107.23  Aligned_cols=121  Identities=14%  Similarity=0.117  Sum_probs=88.1

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-cCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-SGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      ++++||.|.|+|++++++||++.|||++......+.+.  .....++ .++..|.|.+.......               
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~~~~~---------------   64 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKG--FNSYFLSFEDGARLEIMSRTDVTGK---------------   64 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGT--EEEEEEECSSSCEEEEEEETTCCCC---------------
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCC--ccEEEEEcCCCcEEEEEecCCCCCC---------------
Confidence            57999999999999999999999999987642211111  1233334 35677777765322110               


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          110 DHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                         +     ...+.|+.|++|.|+|   +++++++++++|++++.+|...........+++|+|..++|+
T Consensus        65 ---~-----~~~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           65 ---T-----TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             ---C-----CSSCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             ---C-----CcCCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence               0     0134588999999999   889999999999999888876545566788899999988875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.39  E-value=2.1e-12  Score=105.37  Aligned_cols=113  Identities=17%  Similarity=0.158  Sum_probs=86.1

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCC-CCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYS-PSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~-~~~~~~~~~~~~~~~~~~  108 (389)
                      +++++||.+.|+|++++++||++.|||++....+   +     ...++.|+..+.+..... +.                
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~---~-----~~~~~~~~~~l~l~~~~~~~~----------------   58 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND---G-----FAQFTIGSHCLMLSQNHLVPL----------------   58 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---T-----EEEEEETTEEEEEESSCSSSC----------------
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC---C-----EEEEEeCCeEEEEEcCCCCCc----------------
Confidence            4789999999999999999999999999875432   1     334566777776643110 00                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                ...+.|+ +++|.|+|+++++++++++|++++.+|...+...+...+++|+|..++|++
T Consensus        59 ----------~~~~~~~-~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  116 (118)
T 2i7r_A           59 ----------ENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  116 (118)
T ss_dssp             ----------CCCCSCE-EEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             ----------ccCCCeE-EEEEEECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEe
Confidence                      0123465 699999999999999999999988888765445567789999999999886

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.37  E-value=1.3e-12  Score=112.49  Aligned_cols=104  Identities=15%  Similarity=0.190  Sum_probs=71.9

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcc-eEEEeccCCCCCCCCchHHHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEM-VLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~-v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      ...+|+|++|.|.|++++++||+++|||++..+...       .+.+...+..+.+. ..+.+..+.   ... ......
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~-------~~~~~~~~~~~~~~~~~~l~~~~~---~~~-~~~~~~   91 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPV-------GADRWLTVVSPEAPDGTQLLLEPS---SHA-AVTPFK   91 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEE-------TTEEEEEEECTTCTTSCEEEEEEC---CST-THHHHH
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecC-------CCceEEEEeccCCCcceEEEeccC---CCc-cccccc
Confidence            456899999999999999999999999998765542       23444445444332 112222221   111 122222


Q ss_pred             hhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          284 EHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ....+.|+.|++|.|+||++++++|+++    |++++.+|
T Consensus        92 ~~~~~~g~~~l~f~VdDvda~~~~l~~~----Gv~~~~~p  127 (155)
T 4g6x_A           92 EALVADGIPAASFAVDDIAAEYERLSAL----GVRFTQEP  127 (155)
T ss_dssp             HHHHHTTCCSEEEEESCHHHHHHHHHHT----TCCEEEEE
T ss_pred             cccccCCceEEEeeechhhhhhhHHhcC----CcEEeeCC
Confidence            2223568999999999999999999999    99999877

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.37  E-value=1e-11  Score=105.25  Aligned_cols=116  Identities=10%  Similarity=0.035  Sum_probs=84.6

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      .++.+.+|+||.|.|+|++++++||++.|||++....+  ++.  .....+..++..|.|.++..               
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~~~~~l~l~~~~~---------------   82 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSGRAGMVVLQEEKE---------------   82 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETTTTEEEEEEECCS---------------
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecCCCcEEEEeccCC---------------
Confidence            35578999999999999999999999999999987653  111  11222223357888876411               


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCee-ccCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                      ..+..|++|.|+  |+++++++|+++|++++ +|.. ..+..+...+++|+|..++|+.
T Consensus        83 ----------------~~~~~h~~~~v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           83 ----------------NWQQQHFSFRVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             ----------------SCCCCEEEEEECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             ----------------CCCCceEEEEEeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence                            125678999997  99999999999999987 4433 2234568888999999998874

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.37  E-value=4.3e-12  Score=105.47  Aligned_cols=119  Identities=10%  Similarity=0.058  Sum_probs=87.0

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+|+||.|.|+|++++++||++.|||++....+ ....+......++.|+..+.|....  ..                
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~--~~----------------   62 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG-DKTFSLSKEKFFLIAGLWICIMEGD--SL----------------   62 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC------CCCSSCEEEEEETTEEEEEEECS--SC----------------
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC-CcccccCCceEEEeCCEEEEEecCC--CC----------------
Confidence            6899999999999999999999999999875432 1000000011455678888777531  10                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                 .+.|..|++|.|  +|+++++++++++|+++..+|....+..+...+++|+|..++|++.
T Consensus        63 -----------~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (133)
T 2p7o_A           63 -----------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAG  122 (133)
T ss_dssp             -----------CCCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECS
T ss_pred             -----------CCCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcC
Confidence                       134788999999  5999999999999999988776533444677889999999999873

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.37  E-value=5.4e-12  Score=103.90  Aligned_cols=106  Identities=16%  Similarity=0.168  Sum_probs=72.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCC---CCCCchHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFG---TKRKSQIQT  281 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~---~~~~s~i~~  281 (389)
                      .+.+|+|+++.|.|++++++||+++|||++.......+     .+.....+..++.  .+.|......   .........
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~~~~   74 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPK-----RHDYKLDLKCGDI--ELEIFGNKLTDSNYCAPPERIS   74 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETT-----TTEEEEEEEETTE--EEEEEECCTTSTTCCCCCCCCC
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCC-----CcceEEEEecCCe--EEEEEecccccccccCCccccC
Confidence            47899999999999999999999999999987654321     2333445555443  4544431000   000000000


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      + . ..+.|++|+||.|+||++++++|+++    |++++..|
T Consensus        75 ~-~-~~~~g~~~~~~~v~d~~~~~~~l~~~----G~~~~~~~  110 (134)
T 3l7t_A           75 W-P-REACGLRHLAFYVEDVEASRQELIAL----GIRVEEVR  110 (134)
T ss_dssp             S-S-SCCSEEEEEEEECSCHHHHHHHHHHH----TCCCCCCE
T ss_pred             C-C-CCCCCeEEEEEEECCHHHHHHHHHhC----CCccccee
Confidence            0 1 14568999999999999999999999    99998766

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.36  E-value=4.9e-12  Score=104.36  Aligned_cols=117  Identities=9%  Similarity=0.019  Sum_probs=87.7

Q ss_pred             CCcceEEEEEEEe--CCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWC--TDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V--~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +++.+|+||.+.|  +|++++++||++.|||++........+..   ...++.|+..+.|...  +..            
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~---~~~~~~~~~~l~l~~~--~~~------------   68 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRG---GCWFKCGNQEIHIGVE--QNF------------   68 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGC---CEEEEETTEEEEEEEC--TTC------------
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCC---ceEEEeCCEEEEEEec--CCC------------
Confidence            3578999999999  89999999999999999876432100001   1235567877777653  110            


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                     ...+..|++|.|+|+++++++++++|+++..+|..  ...+...+++|+|..++|+++
T Consensus        69 ---------------~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           69 ---------------NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR--PDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             ---------------CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECSS--TTEEEEEEECTTSCEEEEEEE
T ss_pred             ---------------CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCCC--CCeeEEEEECCCCCEEEEEeC
Confidence                           12367899999999999999999999998776632  345678889999999999873

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.35  E-value=5.1e-12  Score=102.93  Aligned_cols=111  Identities=15%  Similarity=0.110  Sum_probs=84.6

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      |.+.++ |+.|.|+|++++++||++.|||++....    +.    ...++.+   +..|.+..+..              
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~----~~~~~~~~~~~~~l~l~~~~~--------------   60 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----GW----IVTHASPLEAHAQVSFAREGG--------------   60 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SS----EEEEEEEEEEEEEEEEESSSB--------------
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CE----EEEEecCCCCcEEEEEEcCCC--------------
Confidence            457889 9999999999999999999999988642    21    2233333   45666654310              


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                      ...+..|++|.|+|+++++++++++|++++.+|...+.+.+...+++|+|..++|++
T Consensus        61 ----------------~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           61 ----------------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             ----------------TTBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ----------------CCCceeEEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence                            012456899999999999999999999988887765445578889999999999987

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.35  E-value=4.4e-12  Score=106.76  Aligned_cols=118  Identities=13%  Similarity=0.089  Sum_probs=86.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+|+||.|.|+|++++++||++.|||++....+. ...+......++.|+..|.|....  ..                
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~g~~~l~l~~~~--~~----------------   62 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT-EQFSLSREKFFLIGDIWVAIMQGE--KL----------------   62 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG-STTCCSCEEEEEETTEEEEEEECC--CC----------------
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC-ccccccceEEEEECCEEEEEEeCC--CC----------------
Confidence            67899999999999999999999999998875321 110000011455678888877531  10                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                 ...+..|+||.|+  |+++++++++++|+++..+|...++..+...+++|+|..++|++
T Consensus        63 -----------~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  121 (139)
T 1r9c_A           63 -----------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHT  121 (139)
T ss_dssp             -----------SSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEEC
T ss_pred             -----------CCCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEe
Confidence                       0237889999999  99999999999999988776544334567788999999999987

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.34  E-value=9.8e-12  Score=103.80  Aligned_cols=115  Identities=8%  Similarity=0.038  Sum_probs=83.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-cCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-SGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ...|+||.|.|+|++++++||++ |||++..... ..+.    ...+. .++..+.|... .+..               
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~----~~~~~~~~~~~l~l~~~-~~~~---------------   61 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS----EVHRAVHNGVEFSLYSI-QNPQ---------------   61 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C----CEEEEEETTEEEEEEEC-CCCS---------------
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC----EEEEEeCCCeEEEEEEC-CCCc---------------
Confidence            35799999999999999999999 9999876521 1111    22334 57777777432 1110               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCc-ccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAK-PSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~-~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                 ....+..+++|.|+|+++++++++++|++ ++.+|...+.+.. ..+++|+|..++|.+.
T Consensus        62 -----------~~~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~  120 (128)
T 3g12_A           62 -----------RSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCEL  120 (128)
T ss_dssp             -----------SCCCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC-
T ss_pred             -----------CCCCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEe
Confidence                       01224467999999999999999999999 8878876555555 8899999999999884

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.33  E-value=6.4e-12  Score=107.38  Aligned_cols=119  Identities=11%  Similarity=0.051  Sum_probs=90.4

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++.+++||.|.|+|++++++||++.|||++....+     .   ...++.|+..|.|.+...                  
T Consensus         2 M~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~---~~~~~~~~~~l~l~~~~~------------------   55 (150)
T 3bqx_A            2 SLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP-----E---IIFYQMNGFVLATWLVQN------------------   55 (150)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS-----S---EEEEECSSSEEEEEEHHH------------------
T ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC-----C---EEEEEcCCEEEEEEeccc------------------
Confidence            45789999999999999999999999999876531     1   345566888888875310                  


Q ss_pred             CChHHHHHHHH---hcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAA---SHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~---~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                           ......   ..+.+..+++|.|   +|+++++++++++|++++.+|...+.......+++|+|..++|++.
T Consensus        56 -----~~~~~~~~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  126 (150)
T 3bqx_A           56 -----LQEDVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFN  126 (150)
T ss_dssp             -----HHHHHSSCCCSSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEEC
T ss_pred             -----cccccCCCCCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeC
Confidence                 000000   0134678999999   8999999999999999888776544445788899999999999873

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.33  E-value=1.3e-11  Score=109.20  Aligned_cols=132  Identities=14%  Similarity=0.123  Sum_probs=90.1

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-------------------CEEEEEEcc
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-------------------DLRFVFTAP   88 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-------------------~~~i~l~~p   88 (389)
                      ....+|+||.|.|+|++++++||++.|||++..+...+.+..  ..+.+..+                   +..+.|...
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKF--SLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTE--EEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCce--eEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            346899999999999999999999999999987654333322  23344432                   245666433


Q ss_pred             CCCCCccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEec
Q 016432           89 YSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLY  168 (389)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~  168 (389)
                      .......       ..   .+...      .....|+.|+||.|+|+++++++++++|++++.+|..... ..+..+++|
T Consensus       108 ~~~~~~~-------~~---~~~~g------~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DP  170 (187)
T 3vw9_A          108 WGTEDDE-------TQ---SYHNG------NSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM-KGLAFIQDP  170 (187)
T ss_dssp             TTGGGCT-------TC---CCCCS------SSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS-TTCEEEECT
T ss_pred             cCCCCCC-------cc---ccccC------CCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc-ceEEEEECC
Confidence            2111000       00   00000      0012389999999999999999999999999888764322 236788999


Q ss_pred             CCeEEEEeec
Q 016432          169 GDVVLRYVSY  178 (389)
Q Consensus       169 gg~~~~fve~  178 (389)
                      +|..++|+++
T Consensus       171 dG~~iel~~~  180 (187)
T 3vw9_A          171 DGYWIEILNP  180 (187)
T ss_dssp             TCCEEEEECG
T ss_pred             CCCEEEEEEc
Confidence            9999999984

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.32  E-value=6e-12  Score=106.71  Aligned_cols=111  Identities=14%  Similarity=0.170  Sum_probs=75.9

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccc------cccccCceEEEEEcCCcceEEEeccCCCCCCCCch
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDV------GTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQ  278 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~------~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~  278 (389)
                      .+.+|+|+++.|.|++++++||++ |||++......+..      ..+..+....++..+++...|+|.++... ... .
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~-~~~-~   84 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTP-PTI-A   84 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEES-CCC-C
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCC-CCc-c
Confidence            578999999999999999999999 99998765431100      00012345556666666566766553210 010 0


Q ss_pred             HHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          279 IQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       279 i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+. ...+.|++||||.|+||++++++|+++    |++++..|
T Consensus        85 ~~~~~-~~~~~g~~hl~~~v~d~~~~~~~l~~~----G~~~~~~~  124 (153)
T 1ss4_A           85 DHRTA-PVNALGYLRVMFTVEDIDEMVSRLTKH----GAELVGEV  124 (153)
T ss_dssp             BCTTC-CSSSBEEEEEEEEESCHHHHHHHHHHT----TCEESSCC
T ss_pred             cccCC-CCCCCceEEEEEEeCCHHHHHHHHHHC----CCeecCCC
Confidence            00111 124568999999999999999999999    99999877

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.31  E-value=3.4e-11  Score=99.40  Aligned_cols=101  Identities=16%  Similarity=0.280  Sum_probs=76.7

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      ..++.+|+|+++.|.|++++++||+++|||++......+      .+.....+..+++.+.|.+..+...  .       
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~------~~~~~~~~~~~~~~~~l~l~~~~~~--~-------   72 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLD------PNMRFVTVVPPGAQTQVALGLPSWY--E-------   72 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEE------TTEEEEEEECTTCSCEEEEECGGGC--S-------
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccC------CCceEEEEECCCCceEEEEecCccc--c-------
Confidence            346889999999999999999999999999998765321      2334444555566777777665310  0       


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ......+..|++|.|+|+++++++|+++    |++++.+|
T Consensus        73 -~~~~~~~~~~~~~~v~d~~~~~~~l~~~----G~~~~~~~  108 (133)
T 4hc5_A           73 -DGRKPGGYTGISLITRDIDEAYKTLTER----GVTFTKPP  108 (133)
T ss_dssp             -SCCCSCEEEEEEEEESCHHHHHHHHHHT----TCEESSSC
T ss_pred             -cccCCCCeEEEEEEeCCHHHHHHHHHHC----CCEeecCC
Confidence             0012356899999999999999999999    99999877

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.31  E-value=1.3e-11  Score=103.02  Aligned_cols=114  Identities=11%  Similarity=-0.002  Sum_probs=88.3

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-cCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-SGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      .+.+++||.|.|+|++++++||++.|||++....+     .   ...+. .++..+.|.....+..              
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~---~~~~~~~~~~~l~l~~~~~~~~--------------   67 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP-----R---YVAFPSSGDALFAIWSGGEEPV--------------   67 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS-----S---EEEEECSTTCEEEEESSSCCCC--------------
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC-----C---EEEEEcCCCcEEEEEeCCCCCc--------------
Confidence            35799999999999999999999999999876542     1   22344 4567888776431110              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHH---CCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVA---HGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a---~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  ....+..|++|.|+|   ++++++++++   +|++++.+|.....+ +...+++|+|..++|..
T Consensus        68 ------------~~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g-~~~~~~DPdGn~iel~~  130 (132)
T 3sk2_A           68 ------------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG-RTFLISDPDGHIIRVCP  130 (132)
T ss_dssp             ------------TTSCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE-EEEEEECTTCCEEEEEE
T ss_pred             ------------CCCCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce-EEEEEECCCCCEEEEEe
Confidence                        022367899999986   9999999999   999998888765444 77888999999998876

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.31  E-value=3.1e-11  Score=104.53  Aligned_cols=126  Identities=9%  Similarity=0.016  Sum_probs=91.2

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +.+.+|+||.|.|+|++++++||++.|||++....+   + .   ..+++.|+..+.+..+..... +.     ..... 
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~-~---~~~~~~g~~~~~l~~~~~~~~-~~-----~~~~~-   69 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP---G-Q---LVFFKCGRQMLLLFDPQESSR-AD-----ANNPI-   69 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET---T-T---EEEEEETTEEEEEECHHHHTC-CC-----TTCCS-
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---C-c---EEEEeCCCEEEEEEecCCccC-cc-----ccCCC-
Confidence            458999999999999999999999999999987653   1 1   345566777777765321100 00     00000 


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                ....+.|+.++||.|   +|+++++++++++|++++.+|.. .+..+...+++|+|..++|+++
T Consensus        70 ----------~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  132 (160)
T 3r4q_A           70 ----------PRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNGSYSVYIRDPAGNSVEVGEG  132 (160)
T ss_dssp             ----------CCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTSCEEEEEECTTCCEEEEEEG
T ss_pred             ----------CcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCCcEEEEEECCCCCEEEEEeC
Confidence                      011234789999999   99999999999999998755443 2356788899999999999984

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.31  E-value=3.8e-11  Score=100.46  Aligned_cols=111  Identities=14%  Similarity=0.018  Sum_probs=86.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +++++||.|.|+|++++++||++.|||++....+  .      ...++.|+..|.|.......                 
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~------~~~~~~~~~~l~l~~~~~~~-----------------   56 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q------GAYLELGSLWLCLSREPQYG-----------------   56 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T------EEEEEETTEEEEEEECTTCC-----------------
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C------ceEEecCCEEEEEEeCCCCC-----------------
Confidence            6899999999999999999999999999887542  1      12356688888887641100                 


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                ....+..|++|.|+  |+++++++++++|++++.+|..   ......+++|+|..++|++.
T Consensus        57 ----------~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           57 ----------GPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS---EGDSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             ----------CCCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS---SSCEEEEECTTCCEEEEESC
T ss_pred             ----------CCCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC---CeEEEEEECCCCCEEEEEEC
Confidence                      12347889999997  9999999999999998877653   23467789999999999873

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.30  E-value=4.4e-11  Score=100.81  Aligned_cols=114  Identities=13%  Similarity=0.041  Sum_probs=88.2

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+++||.|.|+|++++++||++.|||++....+  .      ...++.|+..|.|........              . 
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~------~~~~~~~~~~l~l~~~~~~~~--------------~-   58 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T------GAYLTCGDLWVCLSYDEARQY--------------V-   58 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T------EEEEEETTEEEEEEECTTCCC--------------C-
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C------cEEEEECCEEEEEEECCCCCC--------------C-
Confidence            6899999999999999999999999999887642  1      123566888888876421100              0 


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                               ...+.+..|++|.|+  |+++++++++++|+++..+|..   ..+...+++|+|..++|++.
T Consensus        59 ---------~~~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~~~~~~DPdG~~iel~~~  117 (141)
T 1npb_A           59 ---------PPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS---EGASFYFLDPDGHKLELHVG  117 (141)
T ss_dssp             ---------CGGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS---SSEEEEEECTTCCEEEEEEC
T ss_pred             ---------CCCCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC---ceeEEEEECCCCCEEEEEEC
Confidence                     012347889999996  9999999999999998877653   34577889999999999983

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.29  E-value=2.1e-11  Score=103.93  Aligned_cols=121  Identities=15%  Similarity=0.088  Sum_probs=87.8

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+.+.+|+||.|.|+|++++++||++.|||++....+    .    ...++.|+..+.|.....+.. +.       .  
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~----~~~l~~g~~~l~l~~~~~~~~-~~-------~--   83 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----D----RKALCFGDQKFNLHEVGKEFE-PK-------A--   83 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----T----EEEEEETTEEEEEEETTSCCS-SC-------C--
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----C----ceEEEECCcEEEEEEcCCCcC-cc-------c--
Confidence            4568999999999999999999999999999985432    1    123556777777765322110 00       0  


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEc-CHHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVE-DADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~-Dvda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve  177 (389)
                                  .....|..+++|.+. |+++++++++++|+++..+|....+   ......+++|+|..++|++
T Consensus        84 ------------~~~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           84 ------------AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ------------SSCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             ------------CCCCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence                        012346778999986 9999999999999998766654222   2356788999999999876

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.28  E-value=2.2e-11  Score=102.34  Aligned_cols=118  Identities=19%  Similarity=0.139  Sum_probs=88.3

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCEEEEEEccCC-----CCCccccccCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDLRFVFTAPYS-----PSISDAADAGNSS  103 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~~i~l~~p~~-----~~~~~~~~~~~~~  103 (389)
                      +++++||.|.|+|++++++||++ |||++....+  .+ .   ...++. |+..|.|.....     +..          
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~-~---~~~~~~~~~~~l~l~~~~~~~~~~~~~----------   64 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SA-P---HTEAVLDGGIRLAWDTVETVRSYDPEW----------   64 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GC-S---EEEEECTTSCEEEEEEHHHHHHHCTTC----------
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CC-c---eEEEEcCCCeEEEEecCccchhhCccc----------
Confidence            47899999999999999999997 9999875421  11 1   233443 777787765210     000          


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                    ....+.+..+++|.|+   |+++++++++++|++++.+|...+.+.+...+++|+|..++|++.
T Consensus        65 --------------~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  128 (138)
T 2a4x_A           65 --------------QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  128 (138)
T ss_dssp             --------------CCCBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEE
T ss_pred             --------------CCCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeC
Confidence                          0013457889999999   999999999999999888887655556788899999999999873

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.28  E-value=6.8e-11  Score=97.60  Aligned_cols=109  Identities=11%  Similarity=-0.055  Sum_probs=85.8

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      ....|+.|.|+|++++++||++.|||++....   .+     ...++.|+..|.|.....+.                  
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~---~~-----~~~~~~~~~~l~l~~~~~~~------------------   57 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE---DD-----FAGVVRDDVTLFISAVQDQV------------------   57 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---SS-----EEEEEETTEEEEEEECSCTT------------------
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecC---CC-----EEEEEECCEEEEEEcCCCCC------------------
Confidence            45689999999999999999999999998752   11     23456788888876532110                  


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHC------CC--cccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAH------GA--KPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~------Ga--~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                .+ +..|++|.|+|+++++++++++      |+  +++.+|...+.+ +...+++|+|..++|.+
T Consensus        58 ----------~~-~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~  120 (124)
T 1xrk_A           58 ----------VP-DNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVA  120 (124)
T ss_dssp             ----------TG-GGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEE
T ss_pred             ----------CC-CceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEE
Confidence                      11 2358999999999999999999      99  888888765555 78889999999999987

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.28  E-value=4.1e-11  Score=117.40  Aligned_cols=135  Identities=16%  Similarity=0.213  Sum_probs=97.9

Q ss_pred             CCCCcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--CCEEEEEEccCCCCCccccccCC
Q 016432           26 DRFRVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ....+++|+||.++|+  |++++++||++.|||++.......+......+.++..  |.+.|.|+++.....  .     
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~--~-----  224 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNAD--P-----  224 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSB--C-----
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCC--C-----
Confidence            3456899999999999  9999999999999999986532111111223444554  568899988743210  0     


Q ss_pred             CCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC----------c-------eEEE
Q 016432          102 SSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN----------L-------AVIA  163 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~----------~-------~~~~  163 (389)
                                +++..++..+ +.|++||||.|+|+++++++|+++|++++..|.....          +       ..+.
T Consensus       225 ----------~~~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l  294 (357)
T 2r5v_A          225 ----------GQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVL  294 (357)
T ss_dssp             ----------CHHHHHHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCE
T ss_pred             ----------chhHHHHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeE
Confidence                      2556677654 5699999999999999999999999999888743210          0       1367


Q ss_pred             EEEecCCeEEEEee
Q 016432          164 EVQLYGDVVLRYVS  177 (389)
Q Consensus       164 ~v~~~gg~~~~fve  177 (389)
                      ..++++|.++.++.
T Consensus       295 ~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          295 ADEDHGGQLFQIFT  308 (357)
T ss_dssp             EEEETTEEEEEEEB
T ss_pred             EecCCCceEEEEEc
Confidence            77889998887776

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.28  E-value=2e-11  Score=100.08  Aligned_cols=123  Identities=19%  Similarity=0.225  Sum_probs=84.6

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+|+|+++.|.|++++++||+++|||+.......+     ..+....++..++ ...|.|..........        ..
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~--------~~   67 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENK-----TKGFNSYFLSFED-GARLEIMSRTDVTGKT--------TG   67 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEG-----GGTEEEEEEECSS-SCEEEEEEETTCCCCC--------CS
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccC-----CCCccEEEEEcCC-CcEEEEEecCCCCCCC--------Cc
Confidence            46899999999999999999999999987654321     1344555555544 4666665443110111        11


Q ss_pred             CCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      .+.|++|+||.|+|   +++++++|+++    |++++..| ...-      .+             ...++=+|.+|+++
T Consensus        68 ~~~g~~hi~~~v~d~~~v~~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPdG~~i  123 (127)
T 3e5d_A           68 ENLGWAHIAISTGTKEAVDELTEKLRQD----GFAIAGEP-RMTG------DG-------------YYESVVLDPEGNRI  123 (127)
T ss_dssp             SCSSCCCEEEECSSHHHHHHHHHHHHHT----TCCEEEEE-EECT------TS-------------CEEEEEECTTSCEE
T ss_pred             CCCceEEEEEEcCCHHHHHHHHHHHHHc----CCeEecCc-ccCC------CC-------------cEEEEEECCCCCEE
Confidence            45789999999999   88999999999    99998876 3210      01             11345567788888


Q ss_pred             EEec
Q 016432          364 QIFT  367 (389)
Q Consensus       364 qift  367 (389)
                      .+++
T Consensus       124 el~~  127 (127)
T 3e5d_A          124 EITW  127 (127)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8764

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.27  E-value=3.6e-11  Score=98.16  Aligned_cols=101  Identities=19%  Similarity=0.172  Sum_probs=70.7

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||++.......+     .+....++..+++  .|.|...........       
T Consensus         2 ~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~--~l~l~~~~~~~~~~~-------   67 (126)
T 2p25_A            2 FFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPE-----KNDIKLDLKLGSQ--ELEIFISDQFPARPS-------   67 (126)
T ss_dssp             TTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGG-----GTEEEEEEEETTE--EEEEEECTTCCCCCC-------
T ss_pred             cccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC-----CcceEEEEecCCe--EEEEEeccCCCCCCC-------
Confidence            46789999999999999999999999999876532211     1222333554444  455543221001110       


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+.|++|+||.|+|+++++++|+++    |++++..|
T Consensus        68 ~~~~~g~~~~~~~v~d~~~~~~~l~~~----G~~~~~~~  102 (126)
T 2p25_A           68 YPEALGLRHLAFKVEHIEEVIAFLNEQ----GIETEPLR  102 (126)
T ss_dssp             SSCCSSCCCEEEECSCHHHHHHHHHHT----TCCCCCCE
T ss_pred             CCCCccceEEEEEeCCHHHHHHHHHHc----CCcccccc
Confidence            113568999999999999999999999    99988655

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.26  E-value=3.3e-11  Score=106.51  Aligned_cols=133  Identities=14%  Similarity=0.243  Sum_probs=87.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc-----------------ceEEEec
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE-----------------MVLLPMN  267 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g-----------------~v~l~l~  267 (389)
                      ...+|+|+++.|.|++++++||+++|||++......++     .+.....+..+++                 ...|+|.
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~  105 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPI-----MKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELT  105 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETT-----TTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEE
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCC-----CceeEEEecCCCcccccccccchhhhcccCCceEEEE
Confidence            45789999999999999999999999999987654321     2344445554432                 2345542


Q ss_pred             cCCCCCCCCchHHHHHh-hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHH
Q 016432          268 EPVFGTKRKSQIQTYLE-HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQ  346 (389)
Q Consensus       268 e~~~~~~~~s~i~~fl~-~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~  346 (389)
                      ....  ........+.. .....|++||||.|+||++++++|+++    |++++..| ...        .       +  
T Consensus       106 ~~~~--~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~----G~~~~~~~-~~~--------~-------~--  161 (187)
T 3vw9_A          106 HNWG--TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEEL----GVKFVKKP-DDG--------K-------M--  161 (187)
T ss_dssp             EETT--GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHT----TCCEEECT-TSS--------S-------S--
T ss_pred             EecC--CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHC----CCeEeeCC-ccC--------C-------c--
Confidence            2210  00000000000 112348999999999999999999999    99999877 321        0       0  


Q ss_pred             HHHcCceeecCCCceEEEEeccc
Q 016432          347 CEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       347 l~~~~IL~D~D~~g~llqift~~  369 (389)
                         .+++|=+|.+|+++.++...
T Consensus       162 ---~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          162 ---KGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             ---TTCEEEECTTCCEEEEECGG
T ss_pred             ---ceEEEEECCCCCEEEEEEcc
Confidence               12456677889888888754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.26  E-value=5.9e-11  Score=104.79  Aligned_cols=131  Identities=14%  Similarity=0.098  Sum_probs=89.3

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-------------------CCEEEEEEc
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-------------------GDLRFVFTA   87 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-------------------g~~~i~l~~   87 (389)
                      .+.+++++||.|.|+|++++++||++.|||++......+++.  ...+.+..                   ++..|.|..
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~  103 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMK--FSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTH  103 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGT--EEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEE
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCC--ceeEEecccccccCCcccchheeeecCCCceEEEEe
Confidence            345789999999999999999999999999988754321111  22333343                   245676654


Q ss_pred             cCCCCCccccccCCCCCCCCCCChHHHHHHHHhc--CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEE
Q 016432           88 PYSPSISDAADAGNSSASLPTFDHAACRSFAASH--GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEV  165 (389)
Q Consensus        88 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h--g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v  165 (389)
                      ......  .+                ...+...+  ..|+.||||.|+|+++++++++++|++++.+|..... .+...+
T Consensus       104 ~~~~~~--~~----------------~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~-~~~~~~  164 (184)
T 2za0_A          104 NWGTED--DE----------------TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM-KGLAFI  164 (184)
T ss_dssp             ETTGGG--CT----------------TCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS-TTCEEE
T ss_pred             cCCCCC--Cc----------------ccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc-eeEEEE
Confidence            321100  00                00000001  2478899999999999999999999999887764322 236778


Q ss_pred             EecCCeEEEEeec
Q 016432          166 QLYGDVVLRYVSY  178 (389)
Q Consensus       166 ~~~gg~~~~fve~  178 (389)
                      ++|+|..++|++.
T Consensus       165 ~DPdG~~iel~~~  177 (184)
T 2za0_A          165 QDPDGYWIEILNP  177 (184)
T ss_dssp             ECTTCCEEEEECT
T ss_pred             ECCCCCEEEEEec
Confidence            9999999999873

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.26  E-value=4.9e-11  Score=119.99  Aligned_cols=112  Identities=12%  Similarity=0.069  Sum_probs=84.4

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC---ceeEEEEEEE--cCCEEEEEEccCCCCCccccccC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG---NTVHASYLLR--SGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g---~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      ....+.+|+||.++|+|++++++||++.|||++..+...++.   .....+.++.  .|.+.|.|++|..... ..    
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~-~~----  270 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTK-RK----  270 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC----C----
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCC-Cc----
Confidence            345689999999999999999999999999999877533211   0112333343  4679999999852100 00    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-cCCceeEEEEEEcCHHHHHHHHHH----CCCcccCCC
Q 016432          101 NSSASLPTFDHAACRSFAAS-HGLAARSIAVEVEDADVAFNTSVA----HGAKPSSPP  153 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~-hg~gv~~iaf~V~Dvda~~~~a~a----~Ga~~i~~P  153 (389)
                                 +.+.+|++. .|.|++||||.|+|++++++++++    +|++++..|
T Consensus       271 -----------s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          271 -----------SQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             -----------CHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             -----------chhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence                       367889886 578999999999999999999999    899999875

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.25  E-value=1.4e-10  Score=97.00  Aligned_cols=117  Identities=18%  Similarity=0.116  Sum_probs=88.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      .|.|.|+|++++++||++.|||++......+ |.  .....++.|+..|.|..+.....                   . 
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~--~~~~~l~~~~~~l~l~~~~~~~~-------------------~-   61 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GT--IRHADLDTGGGIVMVRRTGEPYT-------------------V-   61 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SS--CSEEEEECSSSEEEEEETTCCSS-------------------C-
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecCC-Cc--EEEEEEecCCeEEEEEecCCCcC-------------------c-
Confidence            6899999999999999999999998765433 32  12445566788888876422110                   0 


Q ss_pred             HHHHHhcC-CceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          115 RSFAASHG-LAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       115 ~~~l~~hg-~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                          ...+ .++.+++|.|+|+++++++++++|++++.+|...+...+...+++|+|..++|+++
T Consensus        62 ----~~~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  122 (137)
T 3itw_A           62 ----SCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRH  122 (137)
T ss_dssp             ----EECCCCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEEC
T ss_pred             ----cCCCCCcEEEEEEEeCCHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEE
Confidence                0112 23448999999999999999999999988887665566788999999999999984

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.25  E-value=8.4e-11  Score=97.40  Aligned_cols=124  Identities=13%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC--cceEEEeccCCCCCCCCchHHHHHhh
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND--EMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~--g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +|+|+++.|.|++++++||+++|||++......++     .+.....+..++  +...|.|..+..   ...       .
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~-------~   66 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPE-----YKYSLAFVGYGPETEEAVIELTYNWG---VDK-------Y   66 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETT-----TTEEEEEEESSCTTTSCEEEEEEETT---CCC-------C
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCC-----CceEEEEEecCCCCCCcEEEEEEcCC---CCc-------c
Confidence            68999999999999999999999999876543211     123334455443  245566654421   110       1


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEE
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQI  365 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqi  365 (389)
                      ..+.|+.|++|.|+||++++++|+++    |++++..| ....      .+            ....++=.|.+|+++.+
T Consensus        67 ~~~~~~~~~~~~v~d~~~~~~~l~~~----G~~~~~~~-~~~~------~g------------~~~~~~~~DPdG~~iel  123 (135)
T 1f9z_A           67 ELGTAYGHIALSVDNAAEACEKIRQN----GGNVTREA-GPVK------GG------------TTVIAFVEDPDGYKIEL  123 (135)
T ss_dssp             CCCSSEEEEEEECSCHHHHHHHHHHT----TCEEEEEE-EECT------TS------------CCEEEEEECTTSCEEEE
T ss_pred             cCCCCccEEEEEeCCHHHHHHHHHHC----CCEEecCC-ccCC------CC------------ceeEEEEECCCCCEEEE
Confidence            13568999999999999999999999    99998866 3210      01            00123446677888887


Q ss_pred             eccc
Q 016432          366 FTKP  369 (389)
Q Consensus       366 ft~~  369 (389)
                      ++.+
T Consensus       124 ~~~~  127 (135)
T 1f9z_A          124 IEEK  127 (135)
T ss_dssp             EEC-
T ss_pred             EecC
Confidence            7654

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.24  E-value=7e-11  Score=95.30  Aligned_cols=107  Identities=12%  Similarity=0.103  Sum_probs=81.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      ++++||.|.|+|++++++||++.|||++....+    ..   ...++. ++..|.+......                  
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~---~~~~~~~~~~~l~l~~~~~~------------------   56 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----NA---FAVMRDNDGFILTLMKGKEV------------------   56 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET----TT---EEEEECTTCCEEEEEECSSC------------------
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC----Cc---EEEEEcCCCcEEEEEeCCCC------------------
Confidence            579999999999999999999999999886542    11   233444 4567777753110                  


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEE---cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          110 DHAACRSFAASHGLAARSIAVEV---EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V---~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                                 ...+..|++|.|   +|+++++++++++|+++. +|... + .+...+++|+|..++++
T Consensus        57 -----------~~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~-~p~~~-~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           57 -----------QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVE-PPKHA-H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -----------CCCTTCCEEEECSSHHHHHHHHHHHHHTTCCCC-CCEEC---CEEEEEEETTTEEEEEE
T ss_pred             -----------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCEEe-cCcCC-C-cEEEEEECCCCcEEEEe
Confidence                       023677899999   899999999999999974 56543 3 56778899999998875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.24  E-value=5.3e-11  Score=100.82  Aligned_cols=116  Identities=16%  Similarity=0.126  Sum_probs=82.4

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      .+.+.+|+|+++.|.|++++++||+++|||++......        + ....+...++...|.|.+..            
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--------~-~~~~~~~~~~~~~l~l~~~~------------   81 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--------R-RWNFLWVSGRAGMVVLQEEK------------   81 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--------T-TEEEEEETTTTEEEEEEECC------------
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--------C-cEEEEEecCCCcEEEEeccC------------
Confidence            45689999999999999999999999999998765421        1 12334444455667776543            


Q ss_pred             HhhcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCc
Q 016432          283 LEHNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQG  360 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g  360 (389)
                          ...+.+|+||.++  ||++++++|+++    |++++.++ ...+       +            ....++=+|.+|
T Consensus        82 ----~~~~~~h~~~~v~~~dld~~~~~l~~~----G~~~~~~~-~~~~-------~------------~~~~~~~~DPdG  133 (141)
T 3ghj_A           82 ----ENWQQQHFSFRVEKSEIEPLKKALESK----GVSVHGPV-NQEW-------M------------QAVSLYFADPNG  133 (141)
T ss_dssp             ----SSCCCCEEEEEECGGGHHHHHHHHHHT----TCCCEEEE-EEGG-------G------------TEEEEEEECTTC
T ss_pred             ----CCCCCceEEEEEeHHHHHHHHHHHHHC----CCeEeCCc-ccCC-------C------------CceEEEEECCCC
Confidence                1346899999997  999999999999    99988433 2211       0            012345567889


Q ss_pred             eEEEEec
Q 016432          361 TLLQIFT  367 (389)
Q Consensus       361 ~llqift  367 (389)
                      +++.+++
T Consensus       134 ~~iel~~  140 (141)
T 3ghj_A          134 HALEFTA  140 (141)
T ss_dssp             CEEEEEE
T ss_pred             CEEEEEE
Confidence            9998876

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.23  E-value=4.2e-11  Score=100.95  Aligned_cols=123  Identities=15%  Similarity=0.095  Sum_probs=86.6

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      .+++||.|.|+|++++++||++.|||++.....  .+.    ...++.|+..+.+.......  .             +.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~----~~~~~~~~~~l~l~~~~~~~--~-------------~~   65 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPI----FRGLDTGKSCIGFNAHEAYE--L-------------MQ   65 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTT----EEEEECSSSEEEEECTHHHH--H-------------TT
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCc----eEEeecCCEEEEEcCccccc--c-------------cc
Confidence            489999999999999999999999999864321  111    33456677777665320000  0             00


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          111 HAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                         ........+.|+ +++|.|+   |+++++++|+++|++++.+|...+...+...+++|+|..++|++.
T Consensus        66 ---~~~~~~~~~~~~-~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  132 (141)
T 2rbb_A           66 ---LAQFSETSGIKF-LLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNV  132 (141)
T ss_dssp             ---CGGGCCCBSCCE-EEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEE
T ss_pred             ---ccccCCCCCCeE-EEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEc
Confidence               000001124465 9999999   599999999999999888887655556788899999999999884

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.22  E-value=2e-10  Score=98.35  Aligned_cols=122  Identities=14%  Similarity=0.112  Sum_probs=84.7

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      ..+++||.|.|+|++++++||++.|||++....   ++ .   ...++.++..+.|..+..+.. ..        .+  .
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~-~---~~~~~~~~~~~~l~~~~~~~~-~~--------~l--~   84 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DM-D---YSMVTTGPVGESGMPDEPGYI-NG--------GM--M   84 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEET---TT-T---EEEEECSCBCTTSSBCSSSCB-CE--------EE--E
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEECC---CC-C---EEEEEeCCcceeecccCCccc-cc--------ce--e
Confidence            368999999999999999999999999988731   11 1   334555654443333211110 00        00  0


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                         .     .....++ +++|.|+|+++++++|+++|++++.+|...++..+...+++|+|..++|++.
T Consensus        85 ---~-----~~~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  144 (148)
T 2r6u_A           85 ---Q-----RGEVTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWET  144 (148)
T ss_dssp             ---E-----SSSSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEE
T ss_pred             ---e-----cCCCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEec
Confidence               0     0001355 8999999999999999999999988876654323678899999999999884

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.22  E-value=2.3e-10  Score=96.13  Aligned_cols=123  Identities=15%  Similarity=0.119  Sum_probs=85.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||++......  . .-..| ...++..  +...|.|.+...   .         
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~-~~~~~-~~~~~~~--g~~~l~l~~~~~---~---------   62 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--E-QFSLS-REKFFLI--GDIWVAIMQGEK---L---------   62 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--S-TTCCS-CEEEEEE--TTEEEEEEECCC---C---------
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--c-ccccc-ceEEEEE--CCEEEEEEeCCC---C---------
Confidence            368899999999999999999999999998764221  0 00011 1113333  234566654421   1         


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                        ...|.+|+||.|+  |+++++++|+++    |++++.+| ....                   .....++=+|.+|++
T Consensus        63 --~~~~~~h~~~~v~~~d~~~~~~~l~~~----G~~~~~~~-~~~~-------------------~~~~~~~~~DPdG~~  116 (139)
T 1r9c_A           63 --AERSYNHIAFKIDDADFDRYAERVGKL----GLDMRPPR-PRVE-------------------GEGRSIYFYDDDNHM  116 (139)
T ss_dssp             --SSCCSCEEEEECCGGGHHHHHHHHHHH----TCCBCCCC-C------------------------CCEEEEECTTSCE
T ss_pred             --CCCCeeEEEEEcCHHHHHHHHHHHHHC----CCcccCCc-ccCC-------------------CCeEEEEEECCCCCE
Confidence              1357899999999  999999999999    99998876 3211                   011345667889999


Q ss_pred             EEEeccccC
Q 016432          363 LQIFTKPVG  371 (389)
Q Consensus       363 lqift~~~~  371 (389)
                      +.+++.|+.
T Consensus       117 iel~~~~~~  125 (139)
T 1r9c_A          117 FELHTGTLT  125 (139)
T ss_dssp             EEEECCCHH
T ss_pred             EEEEeCChh
Confidence            999998874

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.21  E-value=8.3e-11  Score=97.03  Aligned_cols=96  Identities=16%  Similarity=0.292  Sum_probs=68.7

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      +.+.+|+|+++.|.|++++++||+++|||++....         .+  ...+...+  ..+.|...... ...      .
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---------~~--~~~~~~~~--~~~~l~~~~~~-~~~------~   65 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---------AG--RIALEFGH--QKINLHQLGNE-FEP------K   65 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---------TT--EEEEEETT--EEEEEEETTSC-CSS------C
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---------CC--eEEEEcCC--EEEEEEcCCCC-ccc------c
Confidence            45789999999999999999999999999987641         11  23333333  34444333210 000      0


Q ss_pred             hhcCCCCcceEEEEeCC-HHHHHHHHHHhcCCCCceecCCC
Q 016432          284 EHNEGAGVQHLALVSED-IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vdD-I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ....+.|.+|++|.|+| |++++++|+++    |++++..|
T Consensus        66 ~~~~~~~~~~~~~~v~dd~~~~~~~l~~~----G~~~~~~~  102 (133)
T 3ey7_A           66 AQNVRVGSADLCFITDTVLSDAMKHVEDQ----GVTIMEGP  102 (133)
T ss_dssp             CTTCCTTCCEEEEECSSCHHHHHHHHHHT----TCCCCEEE
T ss_pred             CCCCCCCccEEEEEeCcHHHHHHHHHHHC----CCccccCC
Confidence            11245689999999997 99999999999    99998766

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.21  E-value=9.4e-11  Score=100.10  Aligned_cols=116  Identities=13%  Similarity=0.122  Sum_probs=84.7

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+.++. +.|.|+|++++++||++.|||++..+.....+.    ..+...|++.++  ...  .               
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~----~~~~~~~~~~l~--~~~--~---------------   58 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTG----VELAQISTILLI--AGS--E---------------   58 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSS----CEEEEETTEEEE--ESC--H---------------
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCcc----EEEEEeccEEEe--cCC--c---------------
Confidence            3577888 999999999999999999999988765422211    122344553333  211  0               


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                          ...      ...+..+++|.|+|+++++++++++|++++.+|...+.+ +...+++|+|..++|+++
T Consensus        59 ----~~~------~~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~  118 (144)
T 3r6a_A           59 ----EAL------KPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEH  118 (144)
T ss_dssp             ----HHH------GGGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEE
T ss_pred             ----ccC------CCCcceEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCc-eEEEEECCCCCEEEEEEc
Confidence                011      112457899999999999999999999998888765444 677899999999999984

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.21  E-value=1.1e-10  Score=99.29  Aligned_cols=116  Identities=15%  Similarity=0.092  Sum_probs=87.5

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-CEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-DLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +.+++||.|.|+|++++++||++.|||++....+   +     ...++.+ +..|.|........               
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~-----~~~~~~~~~~~l~l~~~~~~~~---------------   79 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP---T-----FSLFVLANGMKLGLWSRHTVEP---------------   79 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET---T-----EEEEECTTSCEEEEEETTSCSS---------------
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC---C-----eEEEEcCCCcEEEEEeCCCCCC---------------
Confidence            4589999999999999999999999999876542   1     2345554 56777765321100               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                          .     ...+.+..+++|.|+   |+++++++|+++|++++.+|...+.. ....+++|+|..++|+++
T Consensus        80 ----~-----~~~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           80 ----K-----ASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFG-YTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             ----C-----CCCSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTE-EEEEECCTTCCEEEEEEE
T ss_pred             ----c-----cCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCc-eEEEEECCCCCEEEEEec
Confidence                0     012347889999997   58999999999999998888765444 677888999999999873

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.21  E-value=2.6e-10  Score=94.25  Aligned_cols=110  Identities=18%  Similarity=0.158  Sum_probs=83.8

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      .--|+.|.|+|++++++||++ |||++....   .  .   ...++.|+..+.|.......                   
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~---~--~---~~~~~~~~~~l~l~~~~~~~-------------------   54 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFRD---A--G---WMILQRGDLMLEFFAHPGLD-------------------   54 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEEC---S--S---EEEEEETTEEEEEEECTTCC-------------------
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEecC---C--C---EEEEEeCCEEEEEEeCCCCC-------------------
Confidence            356899999999999999997 999988652   1  1   34466788888776531100                   


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcc-------cCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKP-------SSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~-------i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                               ...+..|++|.|+|+++++++++++|+++       +.+|...+.+.+...+++|+|..++|++.
T Consensus        55 ---------~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  119 (126)
T 1ecs_A           55 ---------PLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQN  119 (126)
T ss_dssp             ---------GGGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEEC
T ss_pred             ---------CCCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecc
Confidence                     01256789999999999999999999995       55666544455678899999999999984

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.21  E-value=8.6e-11  Score=100.67  Aligned_cols=116  Identities=13%  Similarity=0.038  Sum_probs=84.6

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc-CCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS-GDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~-g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      +++++||.|.|+|++++++||++.|||++....+   +     ...++. ++..+.|........  .            
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~-----~~~~~~~~g~~l~l~~~~~~~~--~------------   61 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP---T-----FAMFVMKTGLRLGLWAQEEIEP--K------------   61 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS---S-----EEEEECTTSCEEEEEEGGGCSS--C------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC---C-----EEEEEcCCCcEEEEecCCcCCc--c------------
Confidence            5789999999999999999999999999876532   1     334554 677777754311100  0            


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                          .      ..+.+..+++|.|+|   +++++++|+++|++++.+|...+.+ ....+++|+|..++|++.
T Consensus        62 ----~------~~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G-~~~~~~DPdG~~iel~~~  123 (148)
T 3rhe_A           62 ----A------HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG-YTFVGVDPDEHRLRIFCL  123 (148)
T ss_dssp             ----C------C----CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE-EEEEEECTTCCEEEEEEE
T ss_pred             ----c------cCCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC-cEEEEECCCCCEEEEEEc
Confidence                0      012255689999987   9999999999999998888765554 678889999999999884

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.20  E-value=1.4e-10  Score=116.48  Aligned_cols=112  Identities=18%  Similarity=0.229  Sum_probs=84.8

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC---ceeEEEEEEE--cCCEEEEEEccCCCCCccccccC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG---NTVHASYLLR--SGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g---~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      ....+.+|+||.++|+|++++++||++.|||++......++.   .....+.++.  .|.+.|.|++|..+.. .     
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~-~-----  266 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTK-R-----  266 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSS-S-----
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccC-C-----
Confidence            445689999999999999999999999999999876532221   0012233444  4679999999852200 0     


Q ss_pred             CCCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHH----CCCcccCCC
Q 016432          101 NSSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVA----HGAKPSSPP  153 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a----~Ga~~i~~P  153 (389)
                                .+.+.+|+..+ |.|++||||.|+|+++++++|++    +|++++..|
T Consensus       267 ----------~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          267 ----------RSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             ----------CCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             ----------CcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence                      03677888864 78999999999999999999999    799998876

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.20  E-value=2.6e-10  Score=94.56  Aligned_cols=125  Identities=17%  Similarity=0.173  Sum_probs=84.9

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||++.........  . .+ ...++..  +...|.|.+...   .         
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~-~~-~~~~~~~--~~~~l~l~~~~~---~---------   62 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTF--S-LS-KEKFFLI--AGLWICIMEGDS---L---------   62 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CC--C-SS-CEEEEEE--TTEEEEEEECSS---C---------
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCccc--c-cC-CceEEEe--CCEEEEEecCCC---C---------
Confidence            367899999999999999999999999998754221000  0 00 1113333  235566654321   1         


Q ss_pred             hcCCCCcceEEEEe--CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                        .+.|++|++|.|  +|+++++++|+++    |++++.+| ...+       +            ....++=+|.+|++
T Consensus        63 --~~~~~~h~~~~v~~~d~~~~~~~l~~~----G~~~~~~~-~~~~-------~------------~~~~~~~~DPdG~~  116 (133)
T 2p7o_A           63 --QERTYNHIAFQIQSEEVDEYTERIKAL----GVEMKPER-PRVQ-------G------------EGRSIYFYDFDNHL  116 (133)
T ss_dssp             --CCCCSCEEEEECCGGGHHHHHHHHHHH----TCCEECCC-CCCT-------T------------CCCEEEEECSSSCE
T ss_pred             --CCCCeeEEEEEcCHHHHHHHHHHHHHC----CCcccCCC-ccCC-------C------------CeeEEEEECCCCCE
Confidence              146799999999  5999999999999    99999877 3211       0            01234557889999


Q ss_pred             EEEeccccCCC
Q 016432          363 LQIFTKPVGDR  373 (389)
Q Consensus       363 lqift~~~~~~  373 (389)
                      +.+++.++..|
T Consensus       117 iel~~~~~~~~  127 (133)
T 2p7o_A          117 FELHAGTLEER  127 (133)
T ss_dssp             EEEECSSCCCC
T ss_pred             EEEEcCChHHH
Confidence            99999887544

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.20  E-value=1.9e-10  Score=98.07  Aligned_cols=121  Identities=13%  Similarity=0.070  Sum_probs=87.9

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHH---HHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRF---SWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy---~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      +.+.+++||.|.|+|++++++||   ++.|||++....+  .+   . . ++. |+..|.|..+..+.. .        .
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~---~-~-~~~-g~~~l~l~~~~~~~~-~--------~   78 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG---K-S-YKH-GKTYLVFVQTEDRFQ-T--------P   78 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE---E-E-EEE-TTEEEEEEECCGGGS-C--------S
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC---c-e-Eec-CCeEEEEEEcCCCcc-c--------c
Confidence            45789999999999999999999   9999999887643  11   1 2 334 778888876532100 0        0


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccC-CCeecc--CceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSS-PPVILD--NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~-~P~~~~--~~~~~~~v~~~gg~~~~fve  177 (389)
                      +   +         ...+.|+.|+||.|+   |+++++++++++|++++. +|....  .......+++|+|..++|++
T Consensus        79 ~---~---------~~~~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           79 T---F---------HRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             C---C---------CTTSSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             c---c---------cccCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            0   0         002347889999999   999999999999999887 354322  23457788999999998875

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.19  E-value=2.6e-10  Score=94.88  Aligned_cols=115  Identities=10%  Similarity=-0.004  Sum_probs=83.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      .++++||.|.|+|++++++||++.|||++....+     .   ...+..++..+.+.....+..                
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-----~---~~~~~~~g~~~~l~~~~~~~~----------------   62 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP-----D---RITLDFFGDQLVCHLSDRWDR----------------   62 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET-----T---EEEEEETTEEEEEEECSCSCS----------------
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC-----C---cEEEEEeCCEEEEEEcCcccc----------------
Confidence            4789999999999999999999999999965532     1   233443444455543211110                


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec----cCceEEEEEEecCCeEEEEeec
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL----DNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~----~~~~~~~~v~~~gg~~~~fve~  178 (389)
                         +       ...+..|+||.+.   |+++++++++++|++++.+|...    .+......+++|+|..++|..+
T Consensus        63 ---~-------~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~  128 (135)
T 3rri_A           63 ---E-------VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYY  128 (135)
T ss_dssp             ---S-------CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEE
T ss_pred             ---c-------CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEE
Confidence               0       1235678999985   59999999999999988777653    2345678899999999999884

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.19  E-value=2.6e-11  Score=102.93  Aligned_cols=136  Identities=17%  Similarity=0.172  Sum_probs=87.9

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccc--cccCceEEEEEcCCcceEEEeccCCCCCCCCchHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGT--SESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQ  280 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~--~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~  280 (389)
                      ...+.+|+|+++.|.|++++++||+++|||++......+..-.  ...+ ...++...++ ..|.|...... ....   
T Consensus        14 ~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~l~l~~~~~~-~~~~---   87 (156)
T 3kol_A           14 PGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG-KVANFITPDG-TILDLFGEPEL-SPPD---   87 (156)
T ss_dssp             TTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT-SEEEEECTTS-CEEEEEECTTC-CCSS---
T ss_pred             ccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC-cEEEEEeCCC-CEEEEEecCCC-CcCC---
Confidence            3468999999999999999999999999999875211100000  0123 2234444433 44555443210 0000   


Q ss_pred             HHHhhcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCC
Q 016432          281 TYLEHNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDD  358 (389)
Q Consensus       281 ~fl~~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~  358 (389)
                      . .....+.|++|+||.|+  ||++++++|+++    |++++..| ....      .+              ..+|=+|.
T Consensus        88 ~-~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~----G~~~~~~~-~~~~------~g--------------~~~~~~DP  141 (156)
T 3kol_A           88 P-NPEKTFTRAYHLAFDIDPQLFDRAVTVIGEN----KIAIAHGP-VTRP------TG--------------RGVYFYDP  141 (156)
T ss_dssp             S-STTCCCSSCCEEEEECCGGGHHHHHHHHHHT----TCCEEEEE-EEC-------CC--------------EEEEEECT
T ss_pred             C-CCCCCCCceEEEEEEecHHHHHHHHHHHHHC----CCccccCc-eecC------Cc--------------cEEEEECC
Confidence            0 01124568999999999  999999999999    99998766 3310      01              14466778


Q ss_pred             CceEEEEecccc
Q 016432          359 QGTLLQIFTKPV  370 (389)
Q Consensus       359 ~g~llqift~~~  370 (389)
                      +|+++++++.|-
T Consensus       142 dG~~iel~~~~~  153 (156)
T 3kol_A          142 DGFMIEIRCDPE  153 (156)
T ss_dssp             TSCEEEEEECCC
T ss_pred             CCCEEEEEecCC
Confidence            899999998874

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.19  E-value=9e-11  Score=96.67  Aligned_cols=94  Identities=17%  Similarity=0.106  Sum_probs=67.1

Q ss_pred             ccceeEeEEEEec--CCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHH
Q 016432          204 YGIRRLDHAVGNV--PELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       204 ~~~~~iDHv~~~V--~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      +++.+|+|+++.|  .|++++++||+++|||++.......    ...+  ..++..++  ..+.|.....    .     
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~--~~~~~~~~--~~l~l~~~~~----~-----   68 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL----KKRG--GCWFKCGN--QEIHIGVEQN----F-----   68 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG----GGGC--CEEEEETT--EEEEEEECTT----C-----
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc----cCCC--ceEEEeCC--EEEEEEecCC----C-----
Confidence            3588999999999  7999999999999999986532110    0011  13344333  3444433210    0     


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                           ...|..|+||.|+|+++++++|+++    |++++.+|
T Consensus        69 -----~~~~~~~~~f~v~d~~~~~~~l~~~----G~~~~~~~  101 (126)
T 2qqz_A           69 -----NPAKRAHPAFYVLKIDEFKQELIKQ----GIEVIDDH  101 (126)
T ss_dssp             -----CCCSSSCEEEEETTHHHHHHHHHHT----TCCCEEEC
T ss_pred             -----CCCCceEEEEEcCCHHHHHHHHHHc----CCCccCCC
Confidence                 1247899999999999999999999    99988766

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=1.1e-10  Score=114.66  Aligned_cols=109  Identities=11%  Similarity=0.092  Sum_probs=83.3

Q ss_pred             CCCCcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCC-Ccee-EEEEEEEcCCEEEEEEcc-CCCCCccccccC
Q 016432           26 DRFRVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLST-GNTV-HASYLLRSGDLRFVFTAP-YSPSISDAADAG  100 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~-g~r~-~~~~~~~~g~~~i~l~~p-~~~~~~~~~~~~  100 (389)
                      ....+.+|+||.++|+  |++++++||++.|||++.......+ .... ..+.....|++.|.|+++ ....        
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~--------  223 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGA--------  223 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCC--------
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCC--------
Confidence            4457899999999999  9999999999999999887643221 1111 122333567889999987 3322        


Q ss_pred             CCCCCCCCCChHHHHHHHHh-cCCceeEEEEEEcCHHHHHHHHHHCCCcccC-CC
Q 016432          101 NSSASLPTFDHAACRSFAAS-HGLAARSIAVEVEDADVAFNTSVAHGAKPSS-PP  153 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~-hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~-~P  153 (389)
                                 +.+.+++.. .+.|++||||.|+|+++++++|+++|++++. .|
T Consensus       224 -----------~~~~~~~~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p  267 (357)
T 1cjx_A          224 -----------GQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  267 (357)
T ss_dssp             -----------SHHHHHHHHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             -----------ChHHHhHHhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCC
Confidence                       255667765 5679999999999999999999999999987 66

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.19  E-value=1.9e-10  Score=101.57  Aligned_cols=135  Identities=14%  Similarity=0.247  Sum_probs=87.8

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCC-----------------cceEEEe
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANND-----------------EMVLLPM  266 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~-----------------g~v~l~l  266 (389)
                      ..+.+|+|+++.|.|++++++||+++|||++......++     .+.....+..++                 +...|.|
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L  101 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPA-----MKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLEL  101 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGG-----GTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEE
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCC-----CCceeEEecccccccCCcccchheeeecCCCceEEE
Confidence            357899999999999999999999999999876543211     123333444332                 2345555


Q ss_pred             ccCCCCCCCCchHHHHHhhc-CCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHH
Q 016432          267 NEPVFGTKRKSQIQTYLEHN-EGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIK  345 (389)
Q Consensus       267 ~e~~~~~~~~s~i~~fl~~~-~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~  345 (389)
                      .+...  ........|...+ ...|++||+|.|+||++++++|+++    |++++..| ...        .       . 
T Consensus       102 ~~~~~--~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~----G~~~~~~p-~~~--------~-------~-  158 (184)
T 2za0_A          102 THNWG--TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEEL----GVKFVKKP-DDG--------K-------M-  158 (184)
T ss_dssp             EEETT--GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHT----TCCEEECT-TSS--------S-------S-
T ss_pred             EecCC--CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHC----CCeeecCC-cCC--------C-------c-
Confidence            43210  0000000111111 1257899999999999999999999    99999877 320        0       0 


Q ss_pred             HHHHcCceeecCCCceEEEEecccc
Q 016432          346 QCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       346 ~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                          ...+|=+|.+|+++.+++.+-
T Consensus       159 ----~~~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          159 ----KGLAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             ----TTCEEEECTTCCEEEEECTTT
T ss_pred             ----eeEEEEECCCCCEEEEEecCc
Confidence                124455778899999987653

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.18  E-value=5.1e-11  Score=100.03  Aligned_cols=119  Identities=13%  Similarity=0.054  Sum_probs=83.7

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEE-----ccCCCCCccccccCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFT-----APYSPSISDAADAGNS  102 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~-----~p~~~~~~~~~~~~~~  102 (389)
                      +.+++++||.|.|+|++++++||++.|||++....+    .    ...+. ++..+...     .......         
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~----~~~~~-~g~~l~~~~~~~~~~~~~~~---------   65 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S----FVLFE-TGFAIHEGRSLEETIWRTSS---------   65 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S----EEEET-TSCEEEEHHHHHHHHHSCCC---------
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C----cEEEe-ccceeccCchhhhhccccCC---------
Confidence            346889999999999999999999999999886532    1    12233 34333311     0000000         


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                ..   ....+.+..|++|.|+|++++++++++ |++++.+|...+.+.+...+++|+|..++|++.
T Consensus        66 ----------~~---~~~~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  127 (141)
T 2qnt_A           66 ----------DA---QEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGES  127 (141)
T ss_dssp             ---------------CCCSCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEEC
T ss_pred             ----------cc---ccccCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEec
Confidence                      00   001244788999999999999999999 999888887655556788899999999999883

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.15  E-value=5e-10  Score=94.81  Aligned_cols=121  Identities=12%  Similarity=0.017  Sum_probs=83.2

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      -.+.|.|+|++++++||++.|||++...... .+     ...++.|+..+.|..+..... ..                .
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~-----~~~l~~g~~~l~l~~~~~~~~-~~----------------~   63 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD-EE-----FVYLTLDGVDVMLEGIAGKSR-KW----------------L   63 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG-GT-----EEEEEETTEEEEEEEC-------------------------
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC-CC-----EEEEEcCCeEEEEEeccCCCc-cc----------------c
Confidence            3589999999999999999999998854321 11     334566888888876421110 00                0


Q ss_pred             HHHHHHhcCCceeEEEEEEcCHHHHHHHHHH-CCCcccCCCee-------ccCceEEEEEEecCCeEEEEeec
Q 016432          114 CRSFAASHGLAARSIAVEVEDADVAFNTSVA-HGAKPSSPPVI-------LDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a-~Ga~~i~~P~~-------~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                      ........+.|+. ++|.|+|+++++++|++ +|++++.+|..       .....+...+++|+|..++|++.
T Consensus        64 ~~~~~~~~~~g~~-~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~  135 (145)
T 2rk9_A           64 SGDLEFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQD  135 (145)
T ss_dssp             ---CCSSTTTTEE-EEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC
T ss_pred             cCccccCCCCceE-EEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEc
Confidence            0000011244776 99999999999999999 99998877763       22234566789999999999884

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.15  E-value=5.8e-10  Score=93.29  Aligned_cols=114  Identities=14%  Similarity=0.083  Sum_probs=83.5

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCCh
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDH  111 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~  111 (389)
                      .--+..|.|+|++++++||++.|||++....+   +     ...++.|+..|.|........                  
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~---~-----~~~l~~~~~~l~l~~~~~~~~------------------   60 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS---N-----YAYLELSGCGLRLLEEPARKI------------------   60 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET---T-----EEEEEETTEEEEEEECCCC--------------------
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC---C-----eEEEEECCEEEEEEeCCCCCc------------------
Confidence            34567999999999999999999999987643   1     345567888888876532110                  


Q ss_pred             HHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCC----CcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          112 AACRSFAASHGLAARSIAVEVEDADVAFNTSVAHG----AKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       112 ~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~G----a~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                      .+       .+.+-.+++|.|+|+++++++++++|    ++++.+|...+.+.+...+++|+|..++|.+.
T Consensus        61 ~~-------~~~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~  124 (134)
T 3fcd_A           61 IP-------DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAP  124 (134)
T ss_dssp             --------------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEE
T ss_pred             CC-------CCCceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEc
Confidence            00       11233689999999999999998654    55666776655566788999999999999883

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.15  E-value=2.4e-10  Score=93.97  Aligned_cols=106  Identities=13%  Similarity=0.030  Sum_probs=82.3

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHH
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAA  113 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~  113 (389)
                      .|+.|.|+|++++++||++.|||++....   .+     ...++.|+..|.|....  .                   .+
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~~-----~~~~~~~~~~l~l~~~~--~-------------------~~   57 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFGD---RD-----FAGVRRGDIRLHISRTE--H-------------------QI   57 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEEC---SS-----EEEEEETTEEEEEEECS--C-------------------HH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeCC---CC-----EEEEEECCEEEEEEcCC--C-------------------CC
Confidence            47999999999999999999999988652   11     33456688888887531  1                   11


Q ss_pred             HHHHHHhcCCceeEEEEEEcCHHHHHHHHHHC------CC--cccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          114 CRSFAASHGLAARSIAVEVEDADVAFNTSVAH------GA--KPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       114 ~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~------Ga--~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                             .+ +..+++|.|+|+++++++++++      |+  +++.+|...+.+ +...+++|+|..++|.+
T Consensus        58 -------~~-~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~  120 (122)
T 1qto_A           58 -------VA-DNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             -------HH-TTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEE
T ss_pred             -------CC-CceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEec
Confidence                   11 2258999999999999999999      99  777788765545 67789999999999887

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.14  E-value=2e-10  Score=113.81  Aligned_cols=114  Identities=12%  Similarity=0.084  Sum_probs=84.9

Q ss_pred             CCCCcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEec---CCCCceeEEEEEEE--cCCEEEEEEccCCCCCccccc
Q 016432           26 DRFRVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSD---LSTGNTVHASYLLR--SGDLRFVFTAPYSPSISDAAD   98 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~---~~~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~   98 (389)
                      ....+.+|+||.++|+  |++++++||++.|||++....+   .........+.++.  .|.+.|.|++|.....  .  
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~--~--  253 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKK--K--  253 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSS--C--
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCC--c--
Confidence            4457899999999999  9999999999999999876532   00111112233444  3568899998752110  0  


Q ss_pred             cCCCCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec
Q 016432           99 AGNSSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL  156 (389)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~  156 (389)
                                   +.+.+|+..+ |.|++||||+|+|+++++++|+++|++++..|...
T Consensus       254 -------------s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Y  299 (381)
T 1t47_A          254 -------------SQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY  299 (381)
T ss_dssp             -------------CHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG
T ss_pred             -------------cHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccH
Confidence                         2667788764 67999999999999999999999999998887654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.14  E-value=1.6e-10  Score=96.66  Aligned_cols=98  Identities=16%  Similarity=0.261  Sum_probs=69.3

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+++.|.|++++++||+++|||++.......+     .+.....+.   +...|.|.++... ... .   +  
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~---~~~~l~l~~~~~~-~~~-~---~--   66 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDT-----TSFAHGVLP---GGLSIVLREHDGG-GTD-L---F--   66 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSS-----EEEEEEECT---TSCEEEEEEETTC-SSS-C---C--
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCC-----CceEEEEEc---CCCEEEEEeCCCC-ccc-C---C--
Confidence            57899999999999999999999999999876543210     112222222   4556777554311 000 0   1  


Q ss_pred             hcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecC
Q 016432          285 HNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       285 ~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      ...+.|+.|+||.|   +|+++++++|+++    |+++..
T Consensus        67 ~~~~~g~~h~~f~v~~~~d~~~~~~~l~~~----G~~~~~  102 (136)
T 2rk0_A           67 DETRPGLDHLSFSVESMTDLDVLEERLAKA----GAAFTP  102 (136)
T ss_dssp             CTTSSEEEEEEEEESSHHHHHHHHHHHHHH----TCCBCC
T ss_pred             CCCCCCcceEEEEeCCHHHHHHHHHHHHHC----CCcccC
Confidence            11356899999999   8999999999999    999874

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.14  E-value=4.1e-10  Score=95.14  Aligned_cols=99  Identities=18%  Similarity=0.224  Sum_probs=71.9

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc--ceEEEeccCCCCCCCCchHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE--MVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g--~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      +.+.+|+|+++.|.|++++++||+++|||++......++     .+.+..++..++.  ...|.|.++..   ...    
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~l~~~~~---~~~----   71 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPE-----DKYTLVFLGYGPEMSSTVLELTYNYG---VTS----   71 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGG-----GTEEEEEEESSCTTTSCEEEEEEETT---CCC----
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCC-----CCeEEEEEEcCCCCCceEEEEEecCC---CCC----
Confidence            357899999999999999999999999999976543211     1234445555442  46677765531   110    


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecC
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                         ...+.|++|++|.|+|+++++++|+++    |++++.
T Consensus        72 ---~~~~~~~~h~~f~v~d~~~~~~~l~~~----G~~~~~  104 (144)
T 2c21_A           72 ---YKHDEAYGHIAIGVEDVKELVADMRKH----DVPIDY  104 (144)
T ss_dssp             ---CCCCSSEEEEEEEESCHHHHHHHHHHT----TCCEEE
T ss_pred             ---CCCCCCceEEEEEeCCHHHHHHHHHHC----CCEEec
Confidence               113568999999999999999999999    998764

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.12  E-value=1.2e-09  Score=91.13  Aligned_cols=113  Identities=19%  Similarity=0.254  Sum_probs=81.7

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+.+.|.|++++++||+++|||++.....        .+   ..+..+  ...|.|....   ..         
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--------~~---~~~~~~--~~~l~l~~~~---~~---------   55 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--------QG---AYLELG--SLWLCLSREP---QY---------   55 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--------TE---EEEEET--TEEEEEEECT---TC---------
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--------Cc---eEEecC--CEEEEEEeCC---CC---------
Confidence            36899999999999999999999999999876432        11   223332  3345555432   10         


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      .....|.+|++|.|+  |+++++++|+++    |++++..| ..        .+              ..++=.|.+|+.
T Consensus        56 ~~~~~~~~h~~~~v~~~d~~~~~~~l~~~----G~~~~~~~-~~--------~~--------------~~~~~~DPdG~~  108 (135)
T 1nki_A           56 GGPAADYTHYAFGIAAADFARFAAQLRAH----GVREWKQN-RS--------EG--------------DSFYFLDPDGHR  108 (135)
T ss_dssp             CCCCSSSCEEEEEECHHHHHHHHHHHHHT----TCCEEECC-CS--------SS--------------CEEEEECTTCCE
T ss_pred             CCCCCCcceEEEEccHHHHHHHHHHHHHC----CCceecCC-CC--------Ce--------------EEEEEECCCCCE
Confidence            113467999999997  999999999999    99998866 31        01              234557788999


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +.+++.+
T Consensus       109 iel~~~~  115 (135)
T 1nki_A          109 LEAHVGD  115 (135)
T ss_dssp             EEEESCC
T ss_pred             EEEEECC
Confidence            9988765

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.12  E-value=4.6e-10  Score=94.46  Aligned_cols=117  Identities=14%  Similarity=0.202  Sum_probs=82.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||++.....        .+   ..+..+  ...|.|.....  ...      . 
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--------~~---~~~~~~--~~~l~l~~~~~--~~~------~-   58 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--------TG---AYLTCG--DLWVCLSYDEA--RQY------V-   58 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--------TE---EEEEET--TEEEEEEECTT--CCC------C-
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--------Cc---EEEEEC--CEEEEEEECCC--CCC------C-
Confidence            36789999999999999999999999999876532        11   223332  33455544421  110      0 


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      ...+.|.+|+||.|+  ||++++++|+++    |++++..| ..         +             ...++=.|.+|++
T Consensus        59 ~~~~~~~~hi~~~v~~~d~~~~~~~l~~~----G~~~~~~~-~~---------~-------------~~~~~~~DPdG~~  111 (141)
T 1npb_A           59 PPQESDYTHYAFTVAEEDFEPLSQRLEQA----GVTIWKQN-KS---------E-------------GASFYFLDPDGHK  111 (141)
T ss_dssp             CGGGSCSCEEEEECCHHHHHHHHHHHHHT----TCCEEECC-CS---------S-------------SEEEEEECTTCCE
T ss_pred             CCCCCCceEEEEEeCHHHHHHHHHHHHHC----CCeEeccC-CC---------c-------------eeEEEEECCCCCE
Confidence            113457899999996  999999999999    99998866 31         1             0234557788999


Q ss_pred             EEEecccc
Q 016432          363 LQIFTKPV  370 (389)
Q Consensus       363 lqift~~~  370 (389)
                      +.+++.+.
T Consensus       112 iel~~~~~  119 (141)
T 1npb_A          112 LELHVGSL  119 (141)
T ss_dssp             EEEEECCH
T ss_pred             EEEEECch
Confidence            99988763

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.11  E-value=9.3e-10  Score=93.56  Aligned_cols=124  Identities=17%  Similarity=0.104  Sum_probs=82.2

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      +..+++++|+.|.|+|++++++||++.|||++........+..   .  +  | ..|.|... .+..             
T Consensus        16 ~~~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~---~--~--g-~~l~l~~~-~~~~-------------   73 (148)
T 3bt3_A           16 RGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFG---D--Y--G-CVFDYPSE-VAVA-------------   73 (148)
T ss_dssp             CSCEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCE---E--E--E-EEESSCTT-TTSC-------------
T ss_pred             cCceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCCcc---E--E--c-cEEEEecc-CCCc-------------
Confidence            3457899999999999999999999999999864221122222   1  2  3 33544111 1110             


Q ss_pred             CCCChHHHHHHHHhc---C-CceeEEEE-EEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          107 PTFDHAACRSFAASH---G-LAARSIAV-EVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       107 ~~~~~~~~~~~l~~h---g-~gv~~iaf-~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                            ........|   | .+..+.+| .|+|+++++++++++|++++.+|...+...+...+++|+|..++|++.
T Consensus        74 ------~~~~~~~~~~~~g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           74 ------HLTPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFES  144 (148)
T ss_dssp             ------C--CCCSEEEEESCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEE
T ss_pred             ------ccccccccceeeccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeee
Confidence                  000000000   1 01122366 999999999999999999988887655566788899999999999873

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.08  E-value=8.2e-10  Score=94.00  Aligned_cols=125  Identities=18%  Similarity=0.271  Sum_probs=80.9

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      ..+.+|+|+++.|.|++++++||+++|||++....         .+  ...+...+  ..+.|...... ...      .
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---------~~--~~~l~~~~--~~l~l~~~~~~-~~~------~   78 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---------QN--RKALIFGA--QKINLHQQEME-FEP------K   78 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---------TT--EEEEEETT--EEEEEEETTBC-CSS------C
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---------CC--eEEEEeCC--eEEEEeccCCc-CCC------c
Confidence            46899999999999999999999999999987651         12  12333333  34444333210 000      0


Q ss_pred             hhcCCCCcceEEEEeC-CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          284 EHNEGAGVQHLALVSE-DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vd-DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      ......|..|+||.++ |+++++++|+++    |++++..| ....       +.  .       -....++=.|.+|++
T Consensus        79 ~~~~~~g~~hi~f~~~~dl~~~~~~l~~~----G~~~~~~p-~~~~-------~~--~-------g~~~~~~~~DPdG~~  137 (152)
T 3huh_A           79 ASRPTPGSADLCFITSTPINDVVSEILQA----GISIVEGP-VERT-------GA--T-------GEIMSIYIRDPDGNL  137 (152)
T ss_dssp             CSSCCTTCCEEEEEESSCHHHHHHHHHHT----TCCCSEEE-EEEE-------ET--T-------EEEEEEEEECTTCCE
T ss_pred             CcCCCCCccEEEEEecCCHHHHHHHHHHC----CCeEecCC-cccc-------CC--C-------CcEEEEEEECCCCCE
Confidence            1123568999999997 999999999999    99988766 3210       00  0       001233455677888


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +.+++.+
T Consensus       138 iEl~~~~  144 (152)
T 3huh_A          138 IEISQYV  144 (152)
T ss_dssp             EEEEEC-
T ss_pred             EEEEecc
Confidence            8877654

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.05  E-value=1.3e-09  Score=91.35  Aligned_cols=117  Identities=11%  Similarity=0.043  Sum_probs=80.5

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ...-||.+.|+|++++++||++.|||++..+.....+   .....+..+  ...|.+........               
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~---------------   71 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG---YDGVMFGLPHADYHLEFTQYEGGST---------------   71 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETT---EEEEEEESSSSSEEEEEEEETTCCC---------------
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCC---eeEEEEecCCCceEEEEeecCCCCC---------------
Confidence            3467888899999999999999999998865421111   123445544  34566654321100               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCH---HHHHHHHHHCCCcccC--CCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDA---DVAFNTSVAHGAKPSS--PPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dv---da~~~~a~a~Ga~~i~--~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                ...+.+..|+||.|+|+   ++++++++++|+++..  .|......  . .+++|+|..++|+++
T Consensus        72 ----------~~~~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~-~~~DPdG~~iel~~~  133 (139)
T 1twu_A           72 ----------APVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--V-TIEDPDGWRIVFMNS  133 (139)
T ss_dssp             ----------CCCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--E-EEECTTCCEEEEESS
T ss_pred             ----------CCCCCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--e-EEECCCCCEEEEEEc
Confidence                      01244678999999999   9999999999999873  33322122  2 589999999999973

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.04  E-value=2.4e-09  Score=89.81  Aligned_cols=95  Identities=9%  Similarity=0.075  Sum_probs=68.3

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      .+-|+++.|.|++++++||+++|||++......+      .+.....+..++..+.|.+.....  ...        ...
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~------~~~~~~~~~~~~~~~~l~l~~~~~--~~~--------~~~   74 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH------NGYDGVMFGLPHADYHLEFTQYEG--GST--------APV   74 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE------TTEEEEEEESSSSSEEEEEEEETT--CCC--------CCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCC------CCeeEEEEecCCCceEEEEeecCC--CCC--------CCC
Confidence            4567889999999999999999999987654321      233445566655555666644321  000        113


Q ss_pred             CCCcceEEEEeCCH---HHHHHHHHHhcCCCCceecCC
Q 016432          288 GAGVQHLALVSEDI---FRTLREMRKRSGVGGFEFMPS  322 (389)
Q Consensus       288 g~GvqHiAf~vdDI---~~a~~~l~~~~~~~Gv~~l~~  322 (389)
                      +.|++|+||.|+|+   ++++++|+++    |+++...
T Consensus        75 ~~~~~hi~~~v~d~~~l~~~~~~l~~~----G~~~~~~  108 (139)
T 1twu_A           75 PHPDSLLVFYVPNAVELAAITSKLKHM----GYQEVES  108 (139)
T ss_dssp             CCTTCEEEEECCCHHHHHHHHHHHHHT----TCCEECC
T ss_pred             CCCccEEEEEeCCcchHHHHHHHHHHc----CCcCcCC
Confidence            56789999999999   9999999999    9998843

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.04  E-value=1.2e-09  Score=91.01  Aligned_cols=116  Identities=9%  Similarity=0.062  Sum_probs=80.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+++|+.+.|.|++++++||+++|||++.....         +  ...+... +...|.|.....   ..       .
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~---------~--~~~~~~~-~~~~l~l~~~~~---~~-------~   67 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP---------R--YVAFPSS-GDALFAIWSGGE---EP-------V   67 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS---------S--EEEEECS-TTCEEEEESSSC---CC-------C
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC---------C--EEEEEcC-CCcEEEEEeCCC---CC-------c
Confidence            46789999999999999999999999999875421         1  1223222 334566544321   00       0


Q ss_pred             hcCCCCcceEEEEeCC---HHHHHHHHHH---hcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCC
Q 016432          285 HNEGAGVQHLALVSED---IFRTLREMRK---RSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDD  358 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdD---I~~a~~~l~~---~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~  358 (389)
                       ...+|..|++|.|+|   +++++++|++   +    |++++..| ...-      .+              ..++=.|.
T Consensus        68 -~~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~----G~~~~~~p-~~~~------~g--------------~~~~~~DP  121 (132)
T 3sk2_A           68 -AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSH----QIIVIKEP-YTDV------FG--------------RTFLISDP  121 (132)
T ss_dssp             -TTSCCCEEEEEEESSHHHHHHHHHHHHHCSSS----CCEEEEEE-EEET------TE--------------EEEEEECT
T ss_pred             -CCCCCcceEEEEeCCHHHHHHHHHHHHhhhcC----CCEEeeCC-cccC------ce--------------EEEEEECC
Confidence             134578999999987   9999999999   9    99998776 3210      00              12355678


Q ss_pred             CceEEEEecc
Q 016432          359 QGTLLQIFTK  368 (389)
Q Consensus       359 ~g~llqift~  368 (389)
                      +|+++.+++.
T Consensus       122 dGn~iel~~~  131 (132)
T 3sk2_A          122 DGHIIRVCPL  131 (132)
T ss_dssp             TCCEEEEEEC
T ss_pred             CCCEEEEEeC
Confidence            8999998874

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.02  E-value=3.2e-09  Score=103.23  Aligned_cols=118  Identities=12%  Similarity=0.013  Sum_probs=87.5

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+.+|+||.|.|+|++++++||++.|||++..... +.|..  ....+..++  ..+.+.....+              
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~--~~~~l~~~~~~~~l~~~~~~~~--------------  211 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVE--IGAWMSSNLLGHEVACMRDMTG--------------  211 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEE--EEEEEESSSSSCSEEEEECTTS--------------
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcE--EEEEEEeCCCceEEEEeccCCC--------------
Confidence            368999999999999999999999999999887643 23321  233344332  34555532100              


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeec-cCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVIL-DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~-~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     ...++.|+||.|+|   +++++++|+++|+++...|... .+...+..+++|+|..++++.
T Consensus       212 ---------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  272 (339)
T 3lm4_A          212 ---------------GHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFG  272 (339)
T ss_dssp             ---------------CCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEEC
T ss_pred             ---------------CCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEE
Confidence                           12379999999999   9999999999999987777542 234567889999999999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.02  E-value=1.8e-09  Score=86.92  Aligned_cols=86  Identities=15%  Similarity=0.226  Sum_probs=64.4

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+|+|+++.|.|++++.+||+++|||++.....         + ...++..++ .+.|.+.....   .           
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---------~-~~~~~~~~~-~~~l~l~~~~~---~-----------   56 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---------N-AFAVMRDND-GFILTLMKGKE---V-----------   56 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---------T-TEEEEECTT-CCEEEEEECSS---C-----------
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---------C-cEEEEEcCC-CcEEEEEeCCC---C-----------
Confidence            468999999999999999999999999875311         1 123344433 45666665431   1           


Q ss_pred             CCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecC
Q 016432          287 EGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       287 ~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      ..+|..|++|.|   +|+++++++|+++    |+++..
T Consensus        57 ~~~~~~~~~~~v~~~~d~~~~~~~l~~~----G~~~~~   90 (113)
T 1xqa_A           57 QYPKTFHVGFPQESEEQVDKINQRLKED----GFLVEP   90 (113)
T ss_dssp             CCCTTCCEEEECSSHHHHHHHHHHHHHT----TCCCCC
T ss_pred             CCCceeEEEEEcCCHHHHHHHHHHHHHC----CCEEec
Confidence            135689999999   9999999999999    998754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.00  E-value=1.4e-09  Score=88.32  Aligned_cols=89  Identities=20%  Similarity=0.253  Sum_probs=65.2

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcC-CcceEEEeccCCCCCCCCchHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANN-DEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~-~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +.++++ |+.+.|.|++++++||+++|||++...          .+. ...+..+ .+.+.|.+..+.   .        
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~----------~~~-~~~~~~~~~~~~~l~l~~~~---~--------   60 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMD----------HGW-IVTHASPLEAHAQVSFAREG---G--------   60 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEE----------CSS-EEEEEEEEEEEEEEEEESSS---B--------
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEec----------CCE-EEEEecCCCCcEEEEEEcCC---C--------
Confidence            357889 999999999999999999999998753          121 1122222 124556665432   0        


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                          ...+..|++|.|+|+++++++|+++    |++++.+|
T Consensus        61 ----~~~~~~~~~~~v~d~~~~~~~l~~~----G~~~~~~~   93 (119)
T 2pjs_A           61 ----SGTDVPDLSIEVDNFDEVHARILKA----GLPIEYGP   93 (119)
T ss_dssp             ----TTBCCCSEEEEESCHHHHHHHHHHT----TCCCSEEE
T ss_pred             ----CCCceeEEEEEECCHHHHHHHHHHC----CCccccCC
Confidence                1235789999999999999999999    99988766

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=98.98  E-value=1.5e-09  Score=93.75  Aligned_cols=128  Identities=12%  Similarity=0.123  Sum_probs=83.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+++.|.|++++++||+++|||++.....         + ...++...+  ..+.+..+... ...... ....
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---------~-~~~~~~~g~--~~~~l~~~~~~-~~~~~~-~~~~   70 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP---------G-QLVFFKCGR--QMLLLFDPQES-SRADAN-NPIP   70 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET---------T-TEEEEEETT--EEEEEECHHHH-TCCCTT-CCSC
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---------C-cEEEEeCCC--EEEEEEecCCc-cCcccc-CCCC
Confidence            47899999999999999999999999999876532         1 122333322  33333222100 000000 0001


Q ss_pred             hcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                      ...+.|+.|+||.|   +||++++++|+++    |++++..| . +      +-+             ...++=.|.+|+
T Consensus        71 ~~~~~g~~hi~f~V~~~~dld~~~~~l~~~----G~~~~~~~-~-~------~~g-------------~~~~~~~DPdG~  125 (160)
T 3r4q_A           71 RHGAVGQGHFCFYADDKAEVDEWKTRFEAL----EIPVEHYH-R-W------PNG-------------SYSVYIRDPAGN  125 (160)
T ss_dssp             CCEEEEECEEEEEESSHHHHHHHHHHHHTT----TCCCCEEE-E-C------TTS-------------CEEEEEECTTCC
T ss_pred             cCCCcceeEEEEEeCCHHHHHHHHHHHHHC----CCEEeccc-c-c------cCC-------------cEEEEEECCCCC
Confidence            11345789999999   9999999999999    99988544 2 1      001             123456778899


Q ss_pred             EEEEeccccC
Q 016432          362 LLQIFTKPVG  371 (389)
Q Consensus       362 llqift~~~~  371 (389)
                      ++.+++.|.+
T Consensus       126 ~iel~~~~~~  135 (160)
T 3r4q_A          126 SVEVGEGKLW  135 (160)
T ss_dssp             EEEEEEGGGG
T ss_pred             EEEEEeCCCC
Confidence            9999998854

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=98.98  E-value=1.1e-08  Score=97.74  Aligned_cols=117  Identities=9%  Similarity=0.023  Sum_probs=84.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC-CceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST-GNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~-g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ..+.+|+||.|.|+|++++++||++.|||++......+. |.  .....+..++  ..+.+...  +             
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~-------------  209 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDS--DMGIWLSCSHKVHDIAFVEY--P-------------  209 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCS--EEEEEEESSSSSCSEEEEEC--S-------------
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCc--eEEEEEecCCCceeEEEecC--C-------------
Confidence            468999999999999999999999999999887643322 21  1233344332  22333321  0             


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                      ...++.|+||.|+|++   +++++|+++|+++...|.... +......+++|+|..+++..
T Consensus       210 ----------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (309)
T 3hpy_A          210 ----------------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFM  270 (309)
T ss_dssp             ----------------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEE
T ss_pred             ----------------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEe
Confidence                            1236999999998755   578899999999887776422 34567789999999999876

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=98.98  E-value=3.1e-09  Score=90.21  Aligned_cols=97  Identities=18%  Similarity=0.234  Sum_probs=67.5

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      .+.+.+|+|+++.|.|++++++||+++|||++....         .+ . ..+...+..+.|.......   .+.     
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---------~~-~-~~l~~g~~~l~l~~~~~~~---~~~-----   82 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---------ED-R-KALCFGDQKFNLHEVGKEF---EPK-----   82 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---------TT-E-EEEEETTEEEEEEETTSCC---SSC-----
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---------CC-c-eEEEECCcEEEEEEcCCCc---Ccc-----
Confidence            346899999999999999999999999999987431         11 1 2233333333333322210   000     


Q ss_pred             HhhcCCCCcceEEEEeC-CHHHHHHHHHHhcCCCCceecCCC
Q 016432          283 LEHNEGAGVQHLALVSE-DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vd-DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       .....+|..|++|.++ ||++++++|+++    |+++...|
T Consensus        83 -~~~~~~g~~~~~~~~~~dl~~~~~~l~~~----G~~~~~~p  119 (147)
T 3zw5_A           83 -AAHPVPGSLDICLITEVPLEEMIQHLKAC----DVPIEEGP  119 (147)
T ss_dssp             -CSSCCTTCCEEEEECSSCHHHHHHHHHHT----TCCCCEEE
T ss_pred             -cCCCCCCCceEEEEeccCHHHHHHHHHHc----CCceeeCc
Confidence             0123567899999996 999999999999    99988665

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=98.96  E-value=3e-09  Score=86.33  Aligned_cols=90  Identities=13%  Similarity=0.143  Sum_probs=62.2

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +.+|+|+.+.|.|++++++||+++|||++.+...         +  ...+...+.  .+.+....   ..+      . .
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~---------~--~~~~~~~~~--~l~l~~~~---~~~------~-~   59 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND---------G--FAQFTIGSH--CLMLSQNH---LVP------L-E   59 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---------T--EEEEEETTE--EEEEESSC---SSS------C-C
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC---------C--EEEEEeCCe--EEEEEcCC---CCC------c-c
Confidence            4689999999999999999999999999875311         2  122333332  33332211   000      0 0


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+.|+ |++|.|+|+++++++|+++    |++++..|
T Consensus        60 ~~~~~~-~~~~~v~d~~~~~~~l~~~----G~~~~~~~   92 (118)
T 2i7r_A           60 NFQSGI-IIHIEVEDVDQNYKRLNEL----GIKVLHGP   92 (118)
T ss_dssp             CCCSCE-EEEEECSCHHHHHHHHHHH----TCCEEEEE
T ss_pred             cCCCeE-EEEEEECCHHHHHHHHHHC----CCceecCC
Confidence            123455 8999999999999999999    99988766

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=98.96  E-value=5.7e-09  Score=99.35  Aligned_cols=116  Identities=12%  Similarity=0.038  Sum_probs=82.5

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +.+.+++||.|.|+|++++++||++.|||++........+.+  ....+..+  ...+.+...                 
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~-----------------  206 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--VAQFLSLSTKAHDVAFIHH-----------------  206 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCE--EEEEEESSSBSCSEEEEEC-----------------
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcE--EEEEEEcCCCceeEEEecC-----------------
Confidence            568999999999999999999999999999886543222221  11122322  122333221                 


Q ss_pred             CCCCChHHHHHHHHhcCCc-eeEEEEEEc---CHHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLA-ARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~g-v~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                     .+.| +.|+||.|+   |+++++++|+++|++++.+|.... +......+++|+|..++|++
T Consensus       207 ---------------~~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  268 (307)
T 1mpy_A          207 ---------------PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFC  268 (307)
T ss_dssp             ---------------SSSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEE
T ss_pred             ---------------CCCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEe
Confidence                           1124 789999999   678889999999999877775532 22456789999999999988

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=98.93  E-value=3.6e-09  Score=90.03  Aligned_cols=123  Identities=11%  Similarity=0.054  Sum_probs=83.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||++....          + ....+..  +...|.|.+...       ......
T Consensus         2 M~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----------~-~~~~~~~--~~~~l~l~~~~~-------~~~~~~   61 (150)
T 3bqx_A            2 SLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----------P-EIIFYQM--NGFVLATWLVQN-------LQEDVG   61 (150)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----------S-SEEEEEC--SSSEEEEEEHHH-------HHHHHS
T ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----------C-CEEEEEc--CCEEEEEEeccc-------cccccC
Confidence            4568999999999999999999999999986542          1 1223333  334566654320       000011


Q ss_pred             --hcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          285 --HNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       285 --~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                        ...+.|..|++|.|   +|+++++++|+++    |++++..| ....      .+             ...++=+|.+
T Consensus        62 ~~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPd  117 (150)
T 3bqx_A           62 VAVTSRPGSMALAHNVRAETEVAPLMERLVAA----GGQLLRPA-DAPP------HG-------------GLRGYVADPD  117 (150)
T ss_dssp             SCCCSSCCSCEEEEECSSGGGHHHHHHHHHHT----TCEEEEEE-ECCT------TS-------------SEEEEEECTT
T ss_pred             CCCCCCCCeEEEEEEeCCHHHHHHHHHHHHHC----CCEEecCC-cccC------CC-------------CEEEEEECCC
Confidence              00145789999999   9999999999999    99988766 3210      01             0133557788


Q ss_pred             ceEEEEeccccC
Q 016432          360 GTLLQIFTKPVG  371 (389)
Q Consensus       360 g~llqift~~~~  371 (389)
                      |+++.+++.|..
T Consensus       118 G~~iel~~~~~~  129 (150)
T 3bqx_A          118 GHIWEIAFNPVW  129 (150)
T ss_dssp             CCEEEEEECTTS
T ss_pred             CCEEEEEeCCCc
Confidence            999999988754

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=98.92  E-value=2.2e-08  Score=85.48  Aligned_cols=98  Identities=11%  Similarity=-0.036  Sum_probs=63.9

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      +..+|+|+.+.|.|++++++||+++|||++... .  +      + ...++...+..+  .|.....   ..... .+..
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~------~-~~~~~~~~~~~~--~l~~~~~---~~~~~-~l~~   85 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--D------M-DYSMVTTGPVGE--SGMPDEP---GYING-GMMQ   85 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--T------T-TEEEEECSCBCT--TSSBCSS---SCBCE-EEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--C------C-CEEEEEeCCcce--eecccCC---ccccc-ceee
Confidence            457899999999999999999999999998752 1  0      1 123333333322  2222210   00000 0111


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .....|+ |++|.|+||++++++|+++    |++++..|
T Consensus        86 ~~~~~g~-~l~f~v~dld~~~~~l~~~----G~~~~~~~  119 (148)
T 2r6u_A           86 RGEVTTP-VVTVDVESIESALERIESL----GGKTVTGR  119 (148)
T ss_dssp             SSSSCSC-EEEEECSCHHHHHHHHHHT----TCEEEEEE
T ss_pred             cCCCCeE-EEEEEcCCHHHHHHHHHHc----CCeEecCC
Confidence            1112455 9999999999999999999    99998766

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=98.91  E-value=8.2e-09  Score=85.68  Aligned_cols=118  Identities=12%  Similarity=0.090  Sum_probs=76.7

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      ..+|+|+++.|.|++++++||+++|||++.....         +  ...+......+.+.+....   ..+         
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---------~--~~~~~~~g~~~~l~~~~~~---~~~---------   63 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP---------D--RITLDFFGDQLVCHLSDRW---DRE---------   63 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET---------T--EEEEEETTEEEEEEECSCS---CSS---------
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC---------C--cEEEEEeCCEEEEEEcCcc---ccc---------
Confidence            4679999999999999999999999999964321         1  1222222223333333221   100         


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhh-hHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTY-YKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~Y-Y~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                       ...+..|+||.++   ||++++++|+++    |++++..| ... +..    .+            ....++=+|.+|+
T Consensus        64 -~~~~~~h~~~~~~~~~d~~~~~~~l~~~----G~~~~~~p-~~~~~~~----~~------------~~~~~~~~DPdGn  121 (135)
T 3rri_A           64 -VSMYPRHFGITFRDKKHFDNLYKLAKQR----GIPFYHDL-SRRFEGL----IE------------EHETFFLIDPSNN  121 (135)
T ss_dssp             -CCSSSCEEEEECSSHHHHHHHHHHHHHT----TCCEEEEE-EEESTTS----TT------------CEEEEEEECTTCC
T ss_pred             -CCCCCCeEEEEEcChHhHHHHHHHHHHc----CCceecCc-ccccCCC----CC------------ceEEEEEECCCCC
Confidence             2346899999995   599999999999    99998776 331 100    00            0123455677788


Q ss_pred             EEEEecc
Q 016432          362 LLQIFTK  368 (389)
Q Consensus       362 llqift~  368 (389)
                      ++.+++.
T Consensus       122 ~iel~~~  128 (135)
T 3rri_A          122 LLEFKYY  128 (135)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            8877664

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=98.90  E-value=1.4e-08  Score=97.91  Aligned_cols=115  Identities=12%  Similarity=0.020  Sum_probs=83.0

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      ..+.+|+||.|.|+|++++++|| +.|||++......+.|..  ...+++.++  ..+.+...                 
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~--~~~f~~~~~~~~~~~~~~~-----------------  207 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVT--YAAWMHRKQTVHDTALTGG-----------------  207 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCE--EEEEEESSSSSCSEEEEES-----------------
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcE--EEEEEEcCCCcccEEEeCC-----------------
Confidence            46899999999999999999999 999999876544333321  223333321  22333210                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCC--cccCCCee-ccCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGA--KPSSPPVI-LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga--~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     .+.+++|+||.|+|+++   ++++++++|+  ++...|.. ..+...+..+++|+|..+++..
T Consensus       208 ---------------~~~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          208 ---------------NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             ---------------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             ---------------CCCCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence                           12388999999999999   9999999999  77655533 2234557889999999999976

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=98.90  E-value=9.6e-09  Score=87.21  Aligned_cols=94  Identities=13%  Similarity=0.139  Sum_probs=66.7

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+|+.+.|.|++++++||+++|||++.....         +  ...+...+ ...|.|.....  ....       
T Consensus        22 ~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---------~--~~~~~~~~-~~~l~l~~~~~--~~~~-------   80 (144)
T 2kjz_A           22 HMTHPDFTILYVDNPPASTQFYKALLGVDPVESSP---------T--FSLFVLAN-GMKLGLWSRHT--VEPK-------   80 (144)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET---------T--EEEEECTT-SCEEEEEETTS--CSSC-------
T ss_pred             ccCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC---------C--eEEEEcCC-CcEEEEEeCCC--CCCc-------
Confidence            45699999999999999999999999999875431         1  12333332 34455543321  0010       


Q ss_pred             hcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...+.+..||+|.|+   ||++++++|+++    |++++..|
T Consensus        81 ~~~~~~~~hl~f~v~d~~dv~~~~~~l~~~----G~~~~~~~  118 (144)
T 2kjz_A           81 ASVTGGGGELAFRVENDAQVDETFAGWKAS----GVAMLQQP  118 (144)
T ss_dssp             CCCSSSSCEEEEECSSHHHHHHHHHHHHHT----TCCCCSCC
T ss_pred             cCCCCCceEEEEEeCCHHHHHHHHHHHHHC----CCeEecCc
Confidence            113467999999997   589999999999    99998876

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.90  E-value=9.1e-09  Score=97.60  Aligned_cols=118  Identities=15%  Similarity=0.128  Sum_probs=83.6

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--------CCceeEEEEEEEcCC--EEEEEEccCCCCCcccc
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--------TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAA   97 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--------~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~   97 (389)
                      ..+.+++||.|.|+|++++++||++.|||++......+        .|.. .....+..++  ..+.+...  +      
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~------  208 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPP-AWLRFFGCNPRHHSLAFLPM--P------  208 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCC-EEEEEEESSSBSCSEEEESS--C------
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCc-eEEEEEEECCCccEEEEecC--C------
Confidence            34789999999999999999999999999987543211        1211 1123334332  33444431  1      


Q ss_pred             ccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEE
Q 016432           98 DAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVL  173 (389)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~  173 (389)
                                             ...|+.|+||.|+|+++   ++++|+++|+++..+|.... +......+++|+|..+
T Consensus       209 -----------------------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~i  265 (300)
T 2zyq_A          209 -----------------------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDI  265 (300)
T ss_dssp             -----------------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEE
T ss_pred             -----------------------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEE
Confidence                                   12378999999998554   69999999999887765432 3356788999999999


Q ss_pred             EEee
Q 016432          174 RYVS  177 (389)
Q Consensus       174 ~fve  177 (389)
                      +|+.
T Consensus       266 El~~  269 (300)
T 2zyq_A          266 EFGC  269 (300)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9987

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=98.89  E-value=1.5e-08  Score=85.89  Aligned_cols=123  Identities=13%  Similarity=0.094  Sum_probs=79.7

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      ..++.||.|.|+|++++++||++ +||........  ..   .......++..+.+........ .      .....   
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~---   70 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTD--ES---CACMVVSEQAFVMLIDRARFAD-F------TSKPI---   70 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCB--TT---EEEEEEETTEEEEEEEHHHHGG-G------CSSCB---
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecC--Cc---eeEEeecCcceEeeeccccccc-c------ccccC---
Confidence            47789999999999999999975 77765543221  11   1223334444444432110000 0      00000   


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                              ...++.+..|+||.|+   |+|+++++++++|++++.+|... +......+++|+|+.++++.
T Consensus        71 --------~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~-~~~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           71 --------ADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDY-GFMYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             --------CCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEEC-SSEEEEEEECTTCCEEEEEE
T ss_pred             --------CCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeecccccc-CCEEEEEEEcCCCCEEEEEE
Confidence                    0012335568999995   68999999999999999999875 34567789999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.89  E-value=2.7e-08  Score=94.23  Aligned_cols=116  Identities=13%  Similarity=0.129  Sum_probs=83.9

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEE-EEEccCCCCCccccccCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRF-VFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i-~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ...+.|++|.|+|++++++||++.|||++......+ +.   ....+..++..+ .+... .+.                
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~-~~~----------------  220 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAA-GQ---NYRVLKAGDAEVGGCMEP-PMP----------------  220 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-----------CEEEEETTEEEEEEECC-SST----------------
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCC-Cc---ceEEEEcCCccEeeecCC-CCC----------------
Confidence            467999999999999999999999999987532111 11   133444454332 22211 111                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                  ...+-.+++|.|+|+++++++++++|++++.+|...++..+++.+++|+|..+.|+++
T Consensus       221 ------------~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~  278 (282)
T 3oxh_A          221 ------------GVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKA  278 (282)
T ss_dssp             ------------TCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEE
T ss_pred             ------------CCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEec
Confidence                        1124467999999999999999999999998888765556788999999999999884

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=98.88  E-value=1.1e-08  Score=85.04  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=74.2

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      ...|+|+++.|.|++++++||++ |||+..+....       .|.. ..+... +...+.|....   ...         
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-------~~~~-~~~~~~-~~~~l~l~~~~---~~~---------   61 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-------KGSE-VHRAVH-NGVEFSLYSIQ---NPQ---------   61 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------------CC-EEEEEE-TTEEEEEEECC---CCS---------
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-------CCCE-EEEEeC-CCeEEEEEECC---CCc---------
Confidence            46799999999999999999999 99998654111       1111 122211 23445553221   100         


Q ss_pred             cCCCCcceEEEEeCCHHHHHHHHHHhcCCCCce-ecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          286 NEGAGVQHLALVSEDIFRTLREMRKRSGVGGFE-FMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       286 ~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~-~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                      ....+-.|++|.|+||++++++|+++    |++ ++..| ...-      .+           +  . .+=+|.+|+++.
T Consensus        62 ~~~~~~~~l~f~v~dvd~~~~~l~~~----G~~~~~~~p-~~~~------~G-----------~--~-~~~~DPdGn~ie  116 (128)
T 3g12_A           62 RSQIPSLQLGFQITDLEKTVQELVKI----PGAMCILDP-TDMP------DG-----------K--K-AIVLDPDGHSIE  116 (128)
T ss_dssp             SCCCCSEEEEEEESCHHHHHHHHTTS----TTCEEEEEE-EECC-------C-----------E--E-EEEECTTCCEEE
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHC----CCceeccCc-eeCC------Cc-----------c--E-EEEECCCCCEEE
Confidence            12234578999999999999999999    999 77766 3210      11           0  1 345677888999


Q ss_pred             Eeccc
Q 016432          365 IFTKP  369 (389)
Q Consensus       365 ift~~  369 (389)
                      +++++
T Consensus       117 l~~~~  121 (128)
T 3g12_A          117 LCELE  121 (128)
T ss_dssp             EEC--
T ss_pred             EEEec
Confidence            88876

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=98.87  E-value=1.7e-08  Score=85.81  Aligned_cols=122  Identities=15%  Similarity=0.213  Sum_probs=80.3

Q ss_pred             cceeEeEEEEecCCHHHHHHHH---HHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYV---KSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY---~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      .+.+|+|+++.|.|++++++||   +++|||++.....        .+.  .++.   +...|.|..+... .....   
T Consensus        17 ~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--------~~~--~~~~---g~~~l~l~~~~~~-~~~~~---   79 (146)
T 3ct8_A           17 FQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--------RGK--SYKH---GKTYLVFVQTEDR-FQTPT---   79 (146)
T ss_dssp             TTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--------TEE--EEEE---TTEEEEEEECCGG-GSCSC---
T ss_pred             cccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--------CCc--eEec---CCeEEEEEEcCCC-ccccc---
Confidence            5788999999999999999999   9999999876532        121  1233   2345666543210 00000   


Q ss_pred             HHhhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCC-CChhhhHhHhhhhCCCCChhhHHHHHHcCceeecC
Q 016432          282 YLEHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPS-PPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD  357 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~-P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D  357 (389)
                      + . ..+.|+.|+||.|+   ||++++++|+++    |++++.. | ...-      .+           .....++=+|
T Consensus        80 ~-~-~~~~g~~hi~f~v~~~~dv~~~~~~l~~~----G~~~~~~~p-~~~~------~g-----------~~~~~~~~~D  135 (146)
T 3ct8_A           80 F-H-RKRTGLNHLAFHAASREKVDELTQKLKER----GDPILYEDR-HPFA------GG-----------PNHYAVFCED  135 (146)
T ss_dssp             C-C-TTSSSCCEEEEECSCHHHHHHHHHHHHHH----TCCBCCTTT-TTCT------TC-----------TTCCEEEEEC
T ss_pred             c-c-ccCCCceEEEEECCCHHHHHHHHHHHHHc----CCccccCCC-cccc------CC-----------CceEEEEEEC
Confidence            0 0 12467899999999   999999999999    9999874 4 2210      01           0012345567


Q ss_pred             CCceEEEEec
Q 016432          358 DQGTLLQIFT  367 (389)
Q Consensus       358 ~~g~llqift  367 (389)
                      .+|+++.++.
T Consensus       136 PdG~~iel~~  145 (146)
T 3ct8_A          136 PNRIKVEIVA  145 (146)
T ss_dssp             TTCCEEEEEC
T ss_pred             CCCCEEEEEe
Confidence            7888888775

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=98.85  E-value=5.3e-09  Score=87.51  Aligned_cols=122  Identities=16%  Similarity=0.177  Sum_probs=78.6

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH--
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL--  283 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl--  283 (389)
                      +.+|+|+.+.|.|++++++||++ |||++.....        .+ ....+..+ +...|.|....       ....+.  
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--------~~-~~~~~~~~-~~~~l~l~~~~-------~~~~~~~~   63 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--------SA-PHTEAVLD-GGIRLAWDTVE-------TVRSYDPE   63 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--------GC-SEEEEECT-TSCEEEEEEHH-------HHHHHCTT
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--------CC-ceEEEEcC-CCeEEEEecCc-------cchhhCcc
Confidence            46899999999999999999998 9999864221        11 12223332 34556664321       000000  


Q ss_pred             -hhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          284 -EHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       284 -~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                       ....+.|..|++|.|+   |+++++++|+++    |++++..| ....      .+             ...++=.|.+
T Consensus        64 ~~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPd  119 (138)
T 2a4x_A           64 WQAPTGGHRFAIAFEFPDTASVDKKYAELVDA----GYEGHLKP-WNAV------WG-------------QRYAIVKDPD  119 (138)
T ss_dssp             CCCCBSSCSEEEEEECSSHHHHHHHHHHHHHT----TCCEEEEE-EEET------TT-------------EEEEEEECTT
T ss_pred             cCCCCCCCeEEEEEEeCCHHHHHHHHHHHHHC----CCceeeCC-cccC------CC-------------cEEEEEECCC
Confidence             0113467899999999   999999999999    99988766 3210      01             0123445677


Q ss_pred             ceEEEEeccc
Q 016432          360 GTLLQIFTKP  369 (389)
Q Consensus       360 g~llqift~~  369 (389)
                      |+++.+++.+
T Consensus       120 G~~iel~~~~  129 (138)
T 2a4x_A          120 GNVVDLFAPL  129 (138)
T ss_dssp             CCEEEEEEEC
T ss_pred             CCEEEEEeCC
Confidence            8888877654

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=98.84  E-value=1.8e-08  Score=87.96  Aligned_cols=120  Identities=13%  Similarity=0.034  Sum_probs=81.6

Q ss_pred             eEEEEEEEeCC--HHHHHHHHHHhcCCcEEEEecC-----CC-CceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCC
Q 016432           32 RFHHVEFWCTD--ATNTARRFSWGLGMPIVAKSDL-----ST-GNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        32 ~l~HI~~~V~D--~~~a~~fy~~~lGF~~~~~~~~-----~~-g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      .--++.|.|+|  +++|++||+++|||++......     +. ..+ .....+..++..|.+.... +..          
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~-~~~a~l~~~g~~l~l~~~~-~~~----------   91 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPH-VLSSELNLAGSSFVVCDVS-SLP----------   91 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------C-CCEEEEEETTEEEEEEEGG-GST----------
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCc-EEEEEEEECCeEEEEeCCC-ccc----------
Confidence            34688999999  9999999999999998753210     00 011 1233355677677665421 110          


Q ss_pred             CCCCCCChHHHHHHHHhc--CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec--cCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASH--GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL--DNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~h--g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~--~~~~~~~~v~~~gg~~~~fve~  178 (389)
                       ..+           ...  +.|+ +++|.|+|+++++++|+++|++ +.+|...  +. .+++.++++.|..+.|.+.
T Consensus        92 -~~~-----------~~~~~~~g~-~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~  155 (166)
T 1xy7_A           92 -GFS-----------TAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEK  155 (166)
T ss_dssp             -TCC-----------CCCTTSCCC-EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC-
T ss_pred             -CCc-----------cccCCCCcE-EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEee
Confidence             000           001  2344 7999999999999999999999 9998876  56 6788999999999999873

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.83  E-value=4.5e-08  Score=93.77  Aligned_cols=110  Identities=14%  Similarity=0.083  Sum_probs=82.3

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      ..+.+|+||.|.|+|++++++||++.|||++..+.+  ..     ...++.++  ..+.+...                 
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~-----~~fl~~~~~~~~l~l~~~-----------------  192 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--DF-----MCFLRCNSAHHRIAILPG-----------------  192 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--TT-----EEEEESSSBSCSEEEEES-----------------
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--Ce-----EEEEecCCCcceEEEECC-----------------
Confidence            467999999999999999999999999999886542  11     22233322  23444321                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHHHH---HHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDADVA---FNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~---~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                     . .|+.|++|.|+|++++   +++++++|+++...|.... +...+..+++|+|..+++..
T Consensus       193 ---------------~-~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  252 (310)
T 3b59_A          193 ---------------P-PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTS  252 (310)
T ss_dssp             ---------------S-SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEE
T ss_pred             ---------------C-CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEe
Confidence                           1 3789999999997766   9999999999877665421 34567889999999999887

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=98.83  E-value=4.3e-08  Score=95.35  Aligned_cols=116  Identities=15%  Similarity=0.060  Sum_probs=82.3

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC--CEEEEEEccCCCCCccccccCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG--DLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g--~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ...+.+|+||.|.|+|++++.+||++.|||++....+    .    ...+..|  ...+.|........           
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~----~~~~~~g~~~~~l~l~~~~~~~~-----------  208 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----D----FVRYRSAGDIGNVIDLKLTPIGR-----------  208 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----T----EEEEECSSSSSCEEEEESSCCCB-----------
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----C----EEEEEeCCCCcEEEEEeCCCCCc-----------
Confidence            4478999999999999999999999999999987643    1    1233333  24455544211000           


Q ss_pred             CCCCCChHHHHHHHHhcC-CceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHG-LAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                    ...| .+++||||+|+|   ++++.+++.++|+++ ..+... +......+++|+|..+++..
T Consensus       209 --------------~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~-~~~~~r-~~~~siYfrDP~G~~iEl~t  269 (335)
T 3oaj_A          209 --------------GQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGV-TPVRDR-NYFNAIYFREHGEILFEIAT  269 (335)
T ss_dssp             --------------CBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCC-CCCEEC-SSSEEEEEECTTSCEEEEEE
T ss_pred             --------------CCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCc-cccccC-CcEEEEEEECCCCcEEEEEe
Confidence                          0012 269999999998   677999999999974 344332 23456778999999999876

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.82  E-value=4.4e-08  Score=94.95  Aligned_cols=115  Identities=16%  Similarity=0.101  Sum_probs=84.7

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ..+.||.|.|+|++++++||+++|||++........      ...+..++  ..|.+.....+.                
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~------~~~l~~g~~~~~l~l~~~~~~~----------------  215 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ------RALLGYADNQCKLELQGVKGGV----------------  215 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT------EEEEESSTTSCEEEEEECSSCC----------------
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc------EEEEEeCCceEEEEECCCCCCC----------------
Confidence            458999999999999999999999999987653211      22344443  455554321110                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeec----cCceEEEEEEecCCeEEEEeec
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVIL----DNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~----~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                 ..+.++.|++|.|+  |+++++++++++|++++.+|...    ....+...+++|+|..++|++.
T Consensus       216 -----------~~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          216 -----------DHAAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             -----------CCBTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             -----------CCCCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence                       02346778999995  89999999999999987777542    2245788899999999999984

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.82  E-value=4e-08  Score=95.13  Aligned_cols=116  Identities=13%  Similarity=0.120  Sum_probs=83.6

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--CCE--EEEEEccCCCCCccccccCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--GDL--RFVFTAPYSPSISDAADAGNS  102 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g~~--~i~l~~p~~~~~~~~~~~~~~  102 (389)
                      .+.+.+++||.|.|+|++++++||++.|||++....+   +     ...+..  ++.  .+....+..+..         
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~-----~~~~~~~~~g~~~~~~~~~~~~~~~---------  237 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND---Q-----EAIFQSIKGEAFGEIVVKYLDGPTE---------  237 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS---S-----EEEEESSTTCSTTCEEEEECCSSBC---------
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC---C-----eEEEEecCCCCceEEEEeccCCCCC---------
Confidence            3468999999999999999999999999999887642   1     122333  221  232222211100         


Q ss_pred             CCCCCCCChHHHHHHHHhcC-CceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          103 SASLPTFDHAACRSFAASHG-LAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                       ..+ .++.|+||.|+   |+++++++++++|+++. +|... .......+++|+|..++|++.
T Consensus       238 -----------------~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~-~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          238 -----------------KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR-FYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             -----------------BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC-SSEEEEEEECTTCCEEEEEEE
T ss_pred             -----------------CCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeec-CceEEEEEECCCCCEEEEEEc
Confidence                             012 36889999999   79999999999999984 66553 445678899999999999973

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.82  E-value=2.8e-08  Score=93.80  Aligned_cols=117  Identities=10%  Similarity=0.043  Sum_probs=81.3

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+.+|+||.|.|+|++++++||++.|||++.......  +|.. ....+++.++  ..+.+...  +            
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~------------  202 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETS-VPAHFLHCNGRHHTIALAAF--P------------  202 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEE-EEEEEEESSSBSCSEEEECC--S------------
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCcc-ceEEEEEECCCcceEEEecC--C------------
Confidence            46789999999999999999999999999987543211  1100 1123333321  22333321  0            


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCCcccCCCeecc-CceEEEEEEecCCe-EEEEee
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDV-VLRYVS  177 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~-~~~fve  177 (389)
                                       ...++.|+||.|+|+++   ++++++ +|+++..+|.... +......+++|+|. .++|+.
T Consensus       203 -----------------~~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~  263 (292)
T 1kw3_B          203 -----------------IPKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  263 (292)
T ss_dssp             -----------------CSSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             -----------------CCCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEE
Confidence                             12378999999998654   778999 9999887875433 23456789999999 999987

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=98.80  E-value=1.4e-08  Score=86.71  Aligned_cols=119  Identities=12%  Similarity=0.081  Sum_probs=74.9

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+.+.|.|++++++||+++|||++.....         +  ...+..++ ...|.|...... ...        
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---------~--~~~~~~~~-g~~l~l~~~~~~-~~~--------   61 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP---------T--FAMFVMKT-GLRLGLWAQEEI-EPK--------   61 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS---------S--EEEEECTT-SCEEEEEEGGGC-SSC--------
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC---------C--EEEEEcCC-CcEEEEecCCcC-Ccc--------
Confidence            35789999999999999999999999999865421         1  12233322 344555322100 000        


Q ss_pred             hcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                      ...+.+..|++|.|+|   +++++++|+++    |++++.+| ....               .   -  ..++=.|.+|+
T Consensus        62 ~~~~~~~~~l~f~v~d~~dvd~~~~~l~~~----G~~i~~~p-~~~~---------------~---G--~~~~~~DPdG~  116 (148)
T 3rhe_A           62 AHQTGGGMELSFQVNSNEMVDEIHRQWSDK----EISIIQPP-TQMD---------------F---G--YTFVGVDPDEH  116 (148)
T ss_dssp             CC----CEEEEEECSCHHHHHHHHHHHHHT----TCCEEEEE-EEET---------------T---E--EEEEEECTTCC
T ss_pred             ccCCCCeEEEEEEcCCHHHHHHHHHHHHhC----CCEEEeCC-eecC---------------C---C--cEEEEECCCCC
Confidence            0123457899999987   99999999999    99998766 3211               0   0  12344577888


Q ss_pred             EEEEeccc
Q 016432          362 LLQIFTKP  369 (389)
Q Consensus       362 llqift~~  369 (389)
                      ++.+++..
T Consensus       117 ~iel~~~~  124 (148)
T 3rhe_A          117 RLRIFCLK  124 (148)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEcC
Confidence            88888765

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=98.79  E-value=3.8e-08  Score=93.18  Aligned_cols=115  Identities=13%  Similarity=0.166  Sum_probs=80.0

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +.+|+|+.+.|.|++++.+||+++|||++.....         +  ...+...+..+.|.+...                
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~---------~--~~~~~~~~~~~~l~~~~~----------------   54 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---------N--GDLFRIDSRAWRIAVQQG----------------   54 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---------T--EEEEESSSBSCSEEEEEC----------------
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC---------C--eEEEEeCCCcEEEEEecC----------------
Confidence            6899999999999999999999999999875421         1  123333333333433221                


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       ...|+.|+||.|+   |+++++++|+++    |+++...| ...+..   +-.             ...++=.|.+|+.
T Consensus        55 -~~~~~~~~~f~v~~~~dl~~~~~~l~~~----G~~~~~~~-~~~~~~---~~~-------------~~~~~~~DPdG~~  112 (297)
T 1lgt_A           55 -EVDDLAFAGYEVADAAGLAQMADKLKQA----GIAVTTGD-ASLARR---RGV-------------TGLITFADPFGLP  112 (297)
T ss_dssp             -TTCEEEEEEEEESSHHHHHHHHHHHHHT----TCCCEECC-HHHHHH---HTC-------------SEEEEEECTTSCE
T ss_pred             -CCCCccEEEEEeCCHHHHHHHHHHHHHC----CCeEEeCC-cccccc---CCc-------------eeEEEEECCCCCE
Confidence             1357899999999   999999999999    99988776 321110   000             1234556678888


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +.++..+
T Consensus       113 iel~~~~  119 (297)
T 1lgt_A          113 LEIYYGA  119 (297)
T ss_dssp             EEEEECC
T ss_pred             EEEEECc
Confidence            8888765

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=98.76  E-value=1.1e-07  Score=79.22  Aligned_cols=118  Identities=14%  Similarity=0.100  Sum_probs=77.0

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      .+.+.|.|++++++||+++|||+.......       .| +....+...+  ..|.|...... ...       ...++.
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~-------~g~~~~~~l~~~~--~~l~l~~~~~~-~~~-------~~~~~~   67 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPA-------IGTIRHADLDTGG--GIVMVRRTGEP-YTV-------SCAGGH   67 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESS-------SSSCSEEEEECSS--SEEEEEETTCC-SSC-------EECCCC
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecC-------CCcEEEEEEecCC--eEEEEEecCCC-cCc-------cCCCCC
Confidence            578899999999999999999999866532       13 2333344333  34555443211 000       111233


Q ss_pred             CcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEeccc
Q 016432          290 GVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKP  369 (389)
Q Consensus       290 GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~  369 (389)
                      ++.|++|.|+|+++++++|+++    |++++..| ....      .+             ....+=.|.+|+++++++..
T Consensus        68 ~~~~~~~~v~dv~~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           68 TCKQVIVWVSDVDEHFMRSTAA----GADIVQPL-QDKP------WG-------------LRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHT----TCEEEEEE-EEET------TT-------------EEEEEEECSSSCEEEEEECC
T ss_pred             cEEEEEEEeCCHHHHHHHHHHc----CCeeccCc-cccC------CC-------------cEEEEEECCCCCEEEEEEEc
Confidence            4459999999999999999999    99998766 3211      01             01234467789999988764

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.76  E-value=2.3e-08  Score=95.17  Aligned_cols=117  Identities=10%  Similarity=0.046  Sum_probs=79.9

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      ..+.+|+||.|.|+|++++++|| +.|||++......+  .|.. .....+..++  ..+.+...  +            
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~------------  205 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAV-GTPVFMHCNDRHHSLAFGVG--P------------  205 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCE-ECCEEEESSSSSCSEEECCS--C------------
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCcc-ceEEEEEcCCCceEEEEecC--C------------
Confidence            35789999999999999999999 99999986432111  1100 1122233221  22222211  0            


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                       ...++.|+||.|+|   +++++++++++|+++..+|.... +......+++|+|..++++.
T Consensus       206 -----------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  266 (305)
T 2wl9_A          206 -----------------MDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGW  266 (305)
T ss_dssp             -----------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEE
T ss_pred             -----------------CCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEe
Confidence                             12478999999998   67789999999999877664422 23456789999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.74  E-value=2.7e-08  Score=94.72  Aligned_cols=116  Identities=12%  Similarity=0.030  Sum_probs=78.9

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC--CCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS--TGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~--~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ..++++||.|.|+|++++++|| +.|||++......+  .|.. ....++..++  ..+.+...  +             
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~-------------  208 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMT-AELSFMHCNARDHSIAFGAM--P-------------  208 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCE-EEEEEEBSSSBSCSEEECSC--C-------------
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcc-eEEEEEEeCCCCcEEEEecC--C-------------
Confidence            4579999999999999999999 99999976432111  2200 1122333332  12222210  0             


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                      ...++.|+||.|+|++   +++++++++|+++..+|.... +......+++|+|..++++.
T Consensus       209 ----------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~  269 (302)
T 2ehz_A          209 ----------------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGW  269 (302)
T ss_dssp             ----------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEE
T ss_pred             ----------------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEE
Confidence                            1237899999999866   577899999999887775432 23457789999999999987

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=98.72  E-value=3.7e-08  Score=83.81  Aligned_cols=120  Identities=13%  Similarity=0.212  Sum_probs=75.4

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .++++. +++.|.|++++++||+++|||+........     ..+.....+    +.+.  +....     ...    ..
T Consensus         4 ~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~----~~~~--l~~~~-----~~~----~~   62 (144)
T 3r6a_A            4 KILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIP-----QTGVELAQI----STIL--LIAGS-----EEA----LK   62 (144)
T ss_dssp             CEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCS-----CSSCEEEEE----TTEE--EEESC-----HHH----HG
T ss_pred             EEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccC-----CccEEEEEe----ccEE--EecCC-----ccc----CC
Confidence            367777 999999999999999999999987654321     122222211    1222  22211     000    11


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                         ..+..|++|.|+|+++++++|+++    |++++..| ...-      .+           +   .++=.|.+|++++
T Consensus        63 ---~~~~~hl~f~V~d~d~~~~~l~~~----G~~v~~~p-~~~~------~G-----------~---~~~~~DPdG~~ie  114 (144)
T 3r6a_A           63 ---PFRNTQATFLVDSLDKFKTFLEEN----GAEIIRGP-SKVP------TG-----------R---NMTVRHSDGSVIE  114 (144)
T ss_dssp             ---GGGGCCEEEEESCHHHHHHHHHHT----TCEEEEEE-EEET------TE-----------E---EEEEECTTSCEEE
T ss_pred             ---CCcceEEEEEeCCHHHHHHHHHHc----CCEEecCC-ccCC------Cc-----------e---EEEEECCCCCEEE
Confidence               124699999999999999999999    99998876 3210      00           1   2344567788888


Q ss_pred             EeccccCCC
Q 016432          365 IFTKPVGDR  373 (389)
Q Consensus       365 ift~~~~~~  373 (389)
                      +++.+=.+-
T Consensus       115 l~~~~~~~a  123 (144)
T 3r6a_A          115 YVEHSKIEA  123 (144)
T ss_dssp             EEEECC---
T ss_pred             EEEcCCcch
Confidence            777654433

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=98.72  E-value=3.5e-08  Score=82.78  Aligned_cols=120  Identities=13%  Similarity=0.090  Sum_probs=74.8

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH----
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY----  282 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f----  282 (389)
                      .+|+|+.+.|.|++++++||+++|||++......       .+  ...+..  +...|.+....       .++.+    
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-------~~--~~~~~~--~~~~l~l~~~~-------~~~~~~~~~   68 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS-------PI--FRGLDT--GKSCIGFNAHE-------AYELMQLAQ   68 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB-------TT--EEEEEC--SSSEEEEECTH-------HHHHTTCGG
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccCC-------Cc--eEEeec--CCEEEEEcCcc-------ccccccccc
Confidence            4899999999999999999999999998532211       11  122232  22334443210       00000    


Q ss_pred             HhhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          283 LEHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                      .....+.|+ |++|.|+   ||++++++|+++    |++++..| ....      .+             ...++=+|.+
T Consensus        69 ~~~~~~~~~-~~~f~v~~~~dv~~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPd  123 (141)
T 2rbb_A           69 FSETSGIKF-LLNFDVDTKEAVDKLVPVAIAA----GATLIKAP-YETY------YH-------------WYQAVLLDPE  123 (141)
T ss_dssp             GCCCBSCCE-EEEEECSCHHHHHHHHHHHHHT----TCEEEEEE-EECT------TS-------------EEEEEEECTT
T ss_pred             cCCCCCCeE-EEEEEcCCHHHHHHHHHHHHHc----CCeEecCc-cccC------Cc-------------cEEEEEECCC
Confidence            001134565 9999999   599999999999    99988776 3210      00             1233445677


Q ss_pred             ceEEEEeccc
Q 016432          360 GTLLQIFTKP  369 (389)
Q Consensus       360 g~llqift~~  369 (389)
                      |+++.+++..
T Consensus       124 G~~iel~~~~  133 (141)
T 2rbb_A          124 RNVFRINNVL  133 (141)
T ss_dssp             SCEEEEEEEC
T ss_pred             CCEEEEEEcc
Confidence            8777777654

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.68  E-value=3.9e-07  Score=77.90  Aligned_cols=114  Identities=15%  Similarity=0.044  Sum_probs=82.5

Q ss_pred             EEEEEeC-CHHHHHHHHHHhcCCcEEEEecCCC---------C--ceeEEEEEEEcCCEEEEEEccCCCC-CccccccCC
Q 016432           35 HVEFWCT-DATNTARRFSWGLGMPIVAKSDLST---------G--NTVHASYLLRSGDLRFVFTAPYSPS-ISDAADAGN  101 (389)
Q Consensus        35 HI~~~V~-D~~~a~~fy~~~lGF~~~~~~~~~~---------g--~r~~~~~~~~~g~~~i~l~~p~~~~-~~~~~~~~~  101 (389)
                      +..|+|. |+++|++||+++|||++.......+         +  .+ .....+..++..|.+.... +. .        
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~l~~~~~~l~~~d~~-~~~~--------   75 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDK-IMHARLVVGSFALMASDNH-PAYP--------   75 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCC-EEEEEEEETTEEEEEEECC-TTSC--------
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCc-EEEEEEEECCEEEEEEcCC-CccC--------
Confidence            3789999 9999999999999999876531111         0  12 2334566677777766421 11 0        


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                          .             ....| ..++|.|+|   +|++++++ +.|++++.+|...+.+.++..++++.|....|+.
T Consensus        76 ----~-------------~~~~g-~~l~~~v~d~~evd~~~~~l-~~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~  135 (149)
T 1u6l_A           76 ----Y-------------EGIKG-CSISLNVDSKAEAERLFNAL-AEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNC  135 (149)
T ss_dssp             ----C-------------CCCCS-EEEEEECSSHHHHHHHHHHH-HTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             ----C-------------CCCCc-eEEEEEcCCHHHHHHHHHHH-HCCCEEeecccccCcccceEEEECCCCCEEEEEE
Confidence                0             01224 479999999   88999997 4899999999887667778899999999998887

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.65  E-value=4.4e-07  Score=85.22  Aligned_cols=112  Identities=18%  Similarity=0.064  Sum_probs=80.3

Q ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC----EEEEEEccCCCCCccccccCCCCCCCC
Q 016432           32 RFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD----LRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        32 ~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~----~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      ..-++.+.|+|++++++||.+.|||+.....+.+ |    ....+..|+    ..+.+..+  +..              
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~--~~~--------------  241 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-P----EFAEAALTPWSAGPRFRLAAV--PGP--------------  241 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E----EEEEEESSSSSSSSEEEEEEC--CCS--------------
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c----cEEEEEcCCCccccccccccC--CCc--------------
Confidence            3468899999999999999999999988543211 1    123455554    33333111  110              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc-CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE-DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~-Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   .+.+..+++|.|+ |+++++++++++|++++.+|...+.+.....+++|+|+.+.|.+
T Consensus       242 -------------~~~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~  299 (301)
T 2zw5_A          242 -------------GPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSA  299 (301)
T ss_dssp             -------------SCCCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             -------------CCCCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeC
Confidence                         1112346999999 99999999999999998888775545568889999999998876

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.62  E-value=6.3e-07  Score=84.69  Aligned_cols=179  Identities=6%  Similarity=0.002  Sum_probs=103.0

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcC-----CcEEE--EecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLG-----MPIVA--KSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lG-----F~~~~--~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      ++.+||||.++|+++        +.||     |++..  +|. .-|+.+   .++.-++..|+|.+...+..  ...+  
T Consensus        21 M~~~lDHlVi~v~~l--------~~lG~~~~~f~~~~GG~H~-~~GT~N---~Li~fdg~YLElIai~~~~~--~~~~--   84 (274)
T 3p8a_A           21 MILKFDHIIHYIDQL--------DRFSFPGDVIKLHSGGYHH-KYGTFN---KLGYINENYIELLDVENNEK--LKKM--   84 (274)
T ss_dssp             CCCEEEEEEEECTTG--------GGCCCGGGSSCCEEEEEET-TTTEEE---EEEECSSSEEEEEEESCHHH--HHHH--
T ss_pred             ccccCCEEEEEeccH--------HHcCCccceEEeCCCccCC-CCCCEE---EEEeeCCEEEEEEeecCccc--cccc--
Confidence            378999999999987        4567     98665  342 224332   23333888999988754210  0000  


Q ss_pred             CCCCCC--CCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec----cCc--eE--EEEEEec---
Q 016432          102 SSASLP--TFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL----DNL--AV--IAEVQLY---  168 (389)
Q Consensus       102 ~~~~~~--~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~----~~~--~~--~~~v~~~---  168 (389)
                      ....-+  .+. ....  ....|+|+.++||+|+|+++..+++.++|..... |...    +++  ++  +..+.+.   
T Consensus        85 ~~~~~~~~~f~-~~~~--~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~-p~~~sR~~pDG~~l~W~l~~~~d~~~~  160 (274)
T 3p8a_A           85 AKTIEGGVAFA-TQIV--QEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG-PIQMERDTHKDGKVKWQLLYIMNQDDD  160 (274)
T ss_dssp             TTSTGGGTCTT-THHH--HTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE-EEEEEECCCC--CEEEEEEEEECSSCC
T ss_pred             ccccCccchHH-HHhh--hhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC-CccccccCCCCCEEEEEEEeccCCCcc
Confidence            000000  011 0111  1345789999999999999999999999987532 2211    111  11  2222211   


Q ss_pred             CCeEEEEeecCCCCCCCCCCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEE
Q 016432          169 GDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAE  237 (389)
Q Consensus       169 gg~~~~fve~~~~~~~g~~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~  237 (389)
                      ++..-.||+..  .....|.|.+.        ..+.+..+|++|++.++|.++++.+|+++||.....+
T Consensus       161 ~~~~PFfiqw~--~~~~~r~~~~~--------~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          161 EIKPPFFIQWE--ESDSMRTKKLQ--------KYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SSCCCEEEEES--SCTTHHHHHHT--------TTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccEEEecC--CCccccccccc--------cCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            11111344421  00001111111        1234689999999999999999999999999998644

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.62  E-value=8.7e-07  Score=74.32  Aligned_cols=116  Identities=15%  Similarity=0.014  Sum_probs=80.9

Q ss_pred             eEEEEEEEeC--CHHHHHHHHHHhc-CCcEEEEecCCC-----CceeEEEEEEEcCCEEEEEEccCC-CCCccccccCCC
Q 016432           32 RFHHVEFWCT--DATNTARRFSWGL-GMPIVAKSDLST-----GNTVHASYLLRSGDLRFVFTAPYS-PSISDAADAGNS  102 (389)
Q Consensus        32 ~l~HI~~~V~--D~~~a~~fy~~~l-GF~~~~~~~~~~-----g~r~~~~~~~~~g~~~i~l~~p~~-~~~~~~~~~~~~  102 (389)
                      ++. +.|.|.  |+++|++||+++| ||++.......+     +.+ .....+..++..+.+..... +.          
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~-~~~a~~~~~g~~~~~~~~~~~~~----------   73 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGS-VLKALFRLGDQSVHCIDSHVRHA----------   73 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTS-EEEEEEEETTEEEEEEEESSCCS----------
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCc-EEEEEEEECCEEEEEECCCCCCC----------
Confidence            454 678887  9999999999999 999875321111     112 22344566776665543210 11          


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                            +          ..+.+ ..++|.|+|   +|+++++|+ +|++++.+|...+...+++.++++.|+...+..
T Consensus        74 ------~----------~~~~~-~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~  133 (136)
T 1u7i_A           74 ------F----------DFTPA-FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  133 (136)
T ss_dssp             ------C----------CCCTT-EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             ------C----------CCCCc-eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEe
Confidence                  0          01223 369999999   999999999 999999998887666678888999998887765

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=98.56  E-value=2.9e-07  Score=77.56  Aligned_cols=94  Identities=14%  Similarity=0.041  Sum_probs=60.2

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHH-HHhhcCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQT-YLEHNEGA  289 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~-fl~~~~g~  289 (389)
                      .+.+.|.|++++++||+++|||++......       .+  ...+..  +...+.|.....   ....... ......+.
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-------~~--~~~l~~--g~~~l~l~~~~~---~~~~~~~~~~~~~~~~   73 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPD-------EE--FVYLTL--DGVDVMLEGIAG---KSRKWLSGDLEFPLGS   73 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGG-------GT--EEEEEE--TTEEEEEEEC--------------CCSSTTT
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCC-------CC--EEEEEc--CCeEEEEEeccC---CCcccccCccccCCCC
Confidence            478999999999999999999998753221       12  122333  234455543310   0000000 01112345


Q ss_pred             CcceEEEEeCCHHHHHHHHHH-hcCCCCceecCCC
Q 016432          290 GVQHLALVSEDIFRTLREMRK-RSGVGGFEFMPSP  323 (389)
Q Consensus       290 GvqHiAf~vdDI~~a~~~l~~-~~~~~Gv~~l~~P  323 (389)
                      |+. ++|.|+||++++++|++ +    |++++..|
T Consensus        74 g~~-~~~~v~dvd~~~~~l~~~~----G~~~~~~~  103 (145)
T 2rk9_A           74 GVN-FQWDVIDIEPLYQRVNESA----ADSIYLAL  103 (145)
T ss_dssp             TEE-EEEECSCHHHHHHHHHHHH----GGGEEEEE
T ss_pred             ceE-EEEEECCHHHHHHHHHhhC----CCeEecCc
Confidence            676 99999999999999999 9    99998766

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=98.53  E-value=5.5e-07  Score=73.89  Aligned_cols=80  Identities=14%  Similarity=0.122  Sum_probs=57.2

Q ss_pred             EeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          209 LDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       209 iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      .-|+.+.|.|++++++||++ |||++.+. .        .+  ...+...  ...|.|....   ...          ..
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~-~--------~~--~~~~~~~--~~~l~l~~~~---~~~----------~~   56 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR-D--------AG--WMILQRG--DLMLEFFAHP---GLD----------PL   56 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE-C--------SS--EEEEEET--TEEEEEEECT---TCC----------GG
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec-C--------CC--EEEEEeC--CEEEEEEeCC---CCC----------CC
Confidence            35899999999999999998 99998754 1        12  2233332  3445554332   100          12


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCcee
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEF  319 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~  319 (389)
                      .+..|++|.|+|+++++++|+++    |+++
T Consensus        57 ~~~~~~~~~v~dv~~~~~~l~~~----G~~~   83 (126)
T 1ecs_A           57 ASWFSCCLRLDDLAEFYRQCKSV----GIQE   83 (126)
T ss_dssp             GCCCEEEEEESCHHHHHHHHHHT----TCCB
T ss_pred             CcceEEEEEECCHHHHHHHHHHC----CCcc
Confidence            45789999999999999999999    9985

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.51  E-value=2.9e-06  Score=74.66  Aligned_cols=116  Identities=5%  Similarity=-0.038  Sum_probs=82.5

Q ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC-------------CceeEEEEEEEcCCEEEEEEccCCCCCccccccC
Q 016432           34 HHVEFWCTDATNTARRFSWGLGMPIVAKSDLST-------------GNTVHASYLLRSGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        34 ~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~-------------g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      -...|+++|+++|++||+++||++++......+             ..+ .....++.|+..|.+....++..       
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~-v~hael~i~g~~lm~~D~~g~~~-------   98 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEA-TMHAEFEVLGVKVLCSDSFGRAD-------   98 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTC-EEEEEEEETTEEEEEEECTTCCC-------
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCc-EEEEEEEECCEEEEEECCCCCCC-------
Confidence            456778889999999999999999876432110             112 34556677888888775321110       


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceeEEEEEE--------cCHHHHHHHHHHCC-CcccCCCeeccCceEEEEEEecCCe
Q 016432          101 NSSASLPTFDHAACRSFAASHGLAARSIAVEV--------EDADVAFNTSVAHG-AKPSSPPVILDNLAVIAEVQLYGDV  171 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V--------~Dvda~~~~a~a~G-a~~i~~P~~~~~~~~~~~v~~~gg~  171 (389)
                                         ..+.+ ..+++.|        +|+|+++++|++.| ++++.+|...+.+.++..++++.|+
T Consensus        99 -------------------~~~~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~  158 (172)
T 3l20_A           99 -------------------KINNG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGV  158 (172)
T ss_dssp             -------------------CCCSS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSC
T ss_pred             -------------------CCCCc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCC
Confidence                               01223 3477777        68999999999999 8999998887666678889988888


Q ss_pred             EEEEee
Q 016432          172 VLRYVS  177 (389)
Q Consensus       172 ~~~fve  177 (389)
                      ...|.-
T Consensus       159 ~W~i~~  164 (172)
T 3l20_A          159 RWMLHG  164 (172)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            887654

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=98.50  E-value=6.4e-07  Score=75.72  Aligned_cols=123  Identities=11%  Similarity=0.111  Sum_probs=73.8

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+++|+.+.|.|++++++||+++|||++.+.....      .+.. . +    +. .|.|.....  ...  ......
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~------~~~~-~-~----g~-~l~l~~~~~--~~~--~~~~~~   80 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDD------EGFG-D-Y----GC-VFDYPSEVA--VAH--LTPFRG   80 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECT------TSCE-E-E----EE-EESSCTTTT--SCC----CCCS
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecC------CCcc-E-E----cc-EEEEeccCC--Ccc--cccccc
Confidence            4789999999999999999999999999986422211      1211 1 2    22 255511110  000  000000


Q ss_pred             hc---CCCCcceEEE-EeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCc
Q 016432          285 HN---EGAGVQHLAL-VSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQG  360 (389)
Q Consensus       285 ~~---~g~GvqHiAf-~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g  360 (389)
                      .+   +.++..|.+| .|+||++++++|+++    |++++..| ...-      .+             ...++=.|.+|
T Consensus        81 ~~~~~g~~~~~~~~~~~v~dvd~~~~~l~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPdG  136 (148)
T 3bt3_A           81 FHLFKGEPIKGVAGFMMIEGIDALHKYVKEN----GWDQISDI-YTQP------WG-------------ARECSITTTDG  136 (148)
T ss_dssp             EEEEESCCCSSEEEEEEEECHHHHHHHHHHT----TCCCBCCC-EEET------TT-------------EEEEEEECTTS
T ss_pred             cceeeccCCCccEEEEEcCCHHHHHHHHHHc----CCccccCc-ccCC------Cc-------------cEEEEEECCCC
Confidence            00   1122344466 999999999999999    99988876 3210      01             11335567788


Q ss_pred             eEEEEecc
Q 016432          361 TLLQIFTK  368 (389)
Q Consensus       361 ~llqift~  368 (389)
                      +++.+++.
T Consensus       137 ~~iel~~~  144 (148)
T 3bt3_A          137 CILRFFES  144 (148)
T ss_dssp             CEEEEEEE
T ss_pred             CEEEEeee
Confidence            88887753

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.47  E-value=2.5e-06  Score=72.29  Aligned_cols=115  Identities=14%  Similarity=0.123  Sum_probs=82.4

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhc-CCcEEEEecCC------CCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGL-GMPIVAKSDLS------TGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNS  102 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~l-GF~~~~~~~~~------~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~  102 (389)
                      ++++...-+++.|+++|++||+++| |+++.......      +|.  .....+..++..+++.... +.          
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~--v~ha~l~~~~~~~m~~d~~-~~----------   69 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGT--VQHSIFTLNGQVFMAIDAN-SG----------   69 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTS--EEEEEEEETTEEEEEEC---------------
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCc--EEEEEEEECCEEEEEECCC-CC----------
Confidence            4556666566679999999999999 99987532111      122  3345567788777665321 10          


Q ss_pred             CCCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          103 SASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       103 ~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                        .+.. ..+++.|+|   +|+++++|. .|++++.+|...+.+.+...++++.|+...+..
T Consensus        70 ------------------~~~~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~  127 (139)
T 1tsj_A           70 ------------------TELP-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLAL  127 (139)
T ss_dssp             ---------------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             ------------------CCce-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEee
Confidence                              0112 569999987   899999998 799999999887777788999999999887775

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=98.46  E-value=1.9e-06  Score=70.56  Aligned_cols=78  Identities=12%  Similarity=0.003  Sum_probs=55.1

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      ....|+.+.|.|++++++||+++|||++.+. .        .+  ...+..  +...|.|....   ..           
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~-~--------~~--~~~~~~--~~~~l~l~~~~---~~-----------   56 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFV-E--------DD--FAGVVR--DDVTLFISAVQ---DQ-----------   56 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE-C--------SS--EEEEEE--TTEEEEEEECS---CT-----------
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEec-C--------CC--EEEEEE--CCEEEEEEcCC---CC-----------
Confidence            3457999999999999999999999998764 1        12  122333  33455554432   10           


Q ss_pred             CCCCcceEEEEeCCHHHHHHHHHHh
Q 016432          287 EGAGVQHLALVSEDIFRTLREMRKR  311 (389)
Q Consensus       287 ~g~GvqHiAf~vdDI~~a~~~l~~~  311 (389)
                      ...+..|++|.|+|+++++++|+++
T Consensus        57 ~~~~~~~~~~~v~dv~~~~~~l~~~   81 (124)
T 1xrk_A           57 VVPDNTQAWVWVRGLDELYAEWSEV   81 (124)
T ss_dssp             TTGGGCEEEEEEECHHHHHHHHTTT
T ss_pred             CCCCceEEEEEECCHHHHHHHHHHh
Confidence            1123479999999999999999876

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=98.38  E-value=2.5e-06  Score=70.84  Aligned_cols=120  Identities=13%  Similarity=0.056  Sum_probs=70.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      +..+.|.|++++++||+++|||++.....         +  ...+..  +...|.|.+...   ...     ..  .+.+
T Consensus        10 ~~~l~v~D~~~a~~FY~~~LG~~~~~~~~---------~--~~~l~~--~~~~l~l~~~~~---~~~-----~~--~~~~   66 (134)
T 3fcd_A           10 TPFLHIPDMQEALTLFCDTLGFELKYRHS---------N--YAYLEL--SGCGLRLLEEPA---RKI-----IP--DGIA   66 (134)
T ss_dssp             EEEEEESCHHHHHHHHTTTTCCEEEEEET---------T--EEEEEE--TTEEEEEEECCC---C---------------
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEEEeCC---------C--eEEEEE--CCEEEEEEeCCC---CCc-----CC--CCCc
Confidence            56889999999999999999999876521         1  233333  234566654431   110     00  1123


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEecccc
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPV  370 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift~~~  370 (389)
                      -.|++|.|+||++++++|++++..-|.+++.+| ...-      .+             ...++=+|.+|+++++.+.+-
T Consensus        67 ~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~-~~~~------~g-------------~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           67 RVAICIDVSDIDSLHTKLSPALENLPADQVEPL-KNMP------YG-------------QREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             -EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEE-EECT------TS-------------EEEEEEECTTSCEEEEEEECC
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCccCCccccCC-cccC------CC-------------cEEEEEECCCCCEEEEEEccc
Confidence            479999999999999999987111133344433 2100      01             012344567888888887765


Q ss_pred             CCC
Q 016432          371 GDR  373 (389)
Q Consensus       371 ~~~  373 (389)
                      -+.
T Consensus       127 ~~~  129 (134)
T 3fcd_A          127 EGH  129 (134)
T ss_dssp             TTS
T ss_pred             ccc
Confidence            443

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=98.38  E-value=2.6e-07  Score=78.16  Aligned_cols=124  Identities=18%  Similarity=0.161  Sum_probs=70.3

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ...||+||++.|.|++++++||++ |||........+       + ...........+.+............     ...
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~   71 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDE-------S-CACMVVSEQAFVMLIDRARFADFTSK-----PIA   71 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBT-------T-EEEEEEETTEEEEEEEHHHHGGGCSS-----CBC
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCC-------c-eeEEeecCcceEeeeccccccccccc-----cCC
Confidence            357899999999999999999988 566554322211       1 11111111111111110000000000     000


Q ss_pred             hcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                      ...+.+..|+||.|+   |+++.++++++.    |+.++..| ..+        +.         .   ..+|=+|.+|+
T Consensus        72 ~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~----g~~~~~~p-~~~--------~~---------~---~~~~f~DPDGn  126 (149)
T 4gym_A           72 DATATTEAIVCVSAIDRDDVDRFADTALGA----GGTVARDP-MDY--------GF---------M---YGRSFHDLDGH  126 (149)
T ss_dssp             CTTTCBSCEEEEECSSHHHHHHHHHHHHHT----TCEECSCC-EEC--------SS---------E---EEEEEECTTCC
T ss_pred             CCCCCCeeEEEEEeccHHHHHHHHHHHHhc----Cceeeccc-ccc--------CC---------E---EEEEEEcCCCC
Confidence            112345679999995   578899999999    99999887 431        10         0   12344688899


Q ss_pred             EEEEec
Q 016432          362 LLQIFT  367 (389)
Q Consensus       362 llqift  367 (389)
                      ++.|+.
T Consensus       127 ~iEi~~  132 (149)
T 4gym_A          127 LWEVMW  132 (149)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            998874

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.30  E-value=9.2e-06  Score=68.77  Aligned_cols=113  Identities=15%  Similarity=0.058  Sum_probs=77.1

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCC-cEEEEe--c---CCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           36 VEFWCT-DATNTARRFSWGLGM-PIVAKS--D---LSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        36 I~~~V~-D~~~a~~fy~~~lGF-~~~~~~--~---~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ..|+++ |+++|++||+++||+ ++....  +   +....+ .....++.++..|.+........               
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~-v~ha~l~i~g~~lm~~d~~~~~~---------------   76 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGT-VIHATFTLNGQEFMCIDSYVNHN---------------   76 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTS-EEEEEEEETTEEEEEEECSSCCS---------------
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCc-EEEEEEEECCEEEEEEcCCCCCC---------------
Confidence            456677 899999999999994 654321  1   111122 33555677888888775321110               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                      +          ..+.+ ..+++.|+|   +|+++++|. .|++++.+|...+...+...++++.|+...+.
T Consensus        77 ~----------~~~~~-~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~  135 (138)
T 3oms_A           77 F----------TFTPA-MSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLT  135 (138)
T ss_dssp             C----------CCCTT-SCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEE
T ss_pred             C----------CCCCC-EEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEE
Confidence            0          01223 359999999   999999995 68899999988776667888888888877554

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=98.25  E-value=1e-05  Score=70.26  Aligned_cols=124  Identities=17%  Similarity=0.059  Sum_probs=68.3

Q ss_pred             eEEEEecCC--HHHHHHHHHHhhCCeEeEEEeccccc-ccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          210 DHAVGNVPE--LAPAVAYVKSFTGFHEFAEFTAEDVG-TSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       210 DHv~~~V~d--l~~~~~fY~~~lGf~~~~~~~~~d~~-~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      -|..+.|.|  ++++++||+++|||+........+.. ....+ +....+...+.  .|.+.....  ...     + ..
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~--~l~l~~~~~--~~~-----~-~~   95 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS--SFVVCDVSS--LPG-----F-ST   95 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE--EEEEEEGGG--STT-----C-CC
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCe--EEEEeCCCc--ccC-----C-cc
Confidence            478899999  99999999999999987532100000 00012 21222332222  333332210  000     0 00


Q ss_pred             cC--CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhH-hHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NE--GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYK-NLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~--g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~-~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      ..  +.|+ |++|.|+||++++++|+++    |++ +.+| ... . .. .|               ..+  =.|..|++
T Consensus        96 ~~~~~~g~-~l~~~vdDvda~~~~l~~~----G~~-~~~~-~~~-~~~~-~r---------------~~~--v~DP~G~~  149 (166)
T 1xy7_A           96 AKSEGSGV-TFLLGTKDAEAAVAKAVDA----GAV-KVEV-TEA-EVEL-GF---------------KGK--VTDPFGVT  149 (166)
T ss_dssp             CCTTSCCC-EEEEECSCHHHHHHHHHHT----TCE-ECCC-CHH-HHHT-TE---------------EEE--EECTTSCE
T ss_pred             ccCCCCcE-EEEEEcCCHHHHHHHHHHC----CCE-ECCc-ccc-cCcc-cE---------------EEE--EECCCCCE
Confidence            01  3444 9999999999999999999    999 8776 432 0 00 11               223  34678889


Q ss_pred             EEEeccc
Q 016432          363 LQIFTKP  369 (389)
Q Consensus       363 lqift~~  369 (389)
                      +++++..
T Consensus       150 ~~l~~~~  156 (166)
T 1xy7_A          150 WIFAEKK  156 (166)
T ss_dssp             EEEEC--
T ss_pred             EEEEeec
Confidence            9988753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.22  E-value=2e-05  Score=77.33  Aligned_cols=116  Identities=11%  Similarity=0.054  Sum_probs=77.5

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-C-EEEEEEccCCCCCccccccCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-D-LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-~-~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ...+.+|+||.+.|+|++++..||. .|||.+........+..  ....++.+ . ..+.+...                
T Consensus       147 ~~~~~rlgHV~L~v~D~~~t~~Fy~-~LGf~~sd~~~~~~g~~--~~~f~~~~~~hH~la~~~~----------------  207 (365)
T 4ghg_A          147 AGELVRLDHFNQVTPDVPRGRKYLE-DLGFRVTEDIQDDEGTT--YAAWMHRKGTVHDTALTGG----------------  207 (365)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHH-HTTCEEEEEEECTTSCE--EEEEEESSSSSCSEEEEES----------------
T ss_pred             cccCcceeEEEEeecCHHHHHHHHH-hcCCEEEEEEecCCCce--eEEeeecCCcccceeeecC----------------
Confidence            4467899999999999999999996 59999887655444432  22333332 2 22333221                


Q ss_pred             CCCCCChHHHHHHHHhcCCceeEEEEEEcCHHH---HHHHHHHCCCccc--CCCeec-cCceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHGLAARSIAVEVEDADV---AFNTSVAHGAKPS--SPPVIL-DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda---~~~~a~a~Ga~~i--~~P~~~-~~~~~~~~v~~~gg~~~~fve  177 (389)
                                      .+.+++|+||+|+|.+.   +.+++.++|....  ..|..- .+..-+..+++|+|..+++.-
T Consensus       208 ----------------~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t  270 (365)
T 4ghg_A          208 ----------------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYT  270 (365)
T ss_dssp             ----------------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             ----------------CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEc
Confidence                            12389999999998655   5667888998642  234221 123446788899999998764

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=98.16  E-value=6.2e-06  Score=67.18  Aligned_cols=86  Identities=10%  Similarity=-0.016  Sum_probs=57.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      |+.+.|.|++++++||+++|||++... .        .+  ...+..  +...|.|....   .  ..      .   .+
T Consensus         8 ~~~l~v~D~~~a~~FY~~~LG~~~~~~-~--------~~--~~~~~~--~~~~l~l~~~~---~--~~------~---~~   60 (122)
T 1qto_A            8 VPVLTAVDVPANVSFWVDTLGFEKDFG-D--------RD--FAGVRR--GDIRLHISRTE---H--QI------V---AD   60 (122)
T ss_dssp             CCEEEESSHHHHHHHHHHTTCCEEEEE-C--------SS--EEEEEE--TTEEEEEEECS---C--HH------H---HT
T ss_pred             eEEEEcCCHHHHHHHHHhccCcEEeeC-C--------CC--EEEEEE--CCEEEEEEcCC---C--CC------C---CC
Confidence            789999999999999999999998754 1        12  122333  34556665432   1  00      1   12


Q ss_pred             cceEEEEeCCHHHHHHHHHHhc--CCCCc--eecCCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRS--GVGGF--EFMPSP  323 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~--~~~Gv--~~l~~P  323 (389)
                      ..|++|.|+|+++++++|+++.  ...|+  +++..|
T Consensus        61 ~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~   97 (122)
T 1qto_A           61 NTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPV   97 (122)
T ss_dssp             TCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCC
T ss_pred             ceEEEEEECCHHHHHHHHHhhccccccCccccccCCC
Confidence            3799999999999999998760  01155  666655

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=98.11  E-value=3.1e-06  Score=70.34  Aligned_cols=118  Identities=11%  Similarity=0.104  Sum_probs=70.2

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEe-----ccCCCCCCCCchHH
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM-----NEPVFGTKRKSQIQ  280 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l-----~e~~~~~~~~s~i~  280 (389)
                      +.+++|+.+.|.|++++++||+++|||++.....         +  ...+.  .+ +.+..     ...... ...    
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~---------~--~~~~~--~g-~~l~~~~~~~~~~~~~-~~~----   66 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG---------S--FVLFE--TG-FAIHEGRSLEETIWRT-SSD----   66 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS---------S--EEEET--TS-CEEEEHHHHHHHHHSC-CC-----
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC---------C--cEEEe--cc-ceeccCchhhhhcccc-CCc----
Confidence            4678999999999999999999999999875321         1  11221  12 22321     010000 000    


Q ss_pred             HHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCc
Q 016432          281 TYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQG  360 (389)
Q Consensus       281 ~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g  360 (389)
                        .....+.+..|++|.|+|+++++++|++     |++++..| ....      .+             ...++=.|.+|
T Consensus        67 --~~~~~~~~~~~~~~~v~dv~~~~~~l~~-----G~~~~~~~-~~~~------~g-------------~~~~~~~DPdG  119 (141)
T 2qnt_A           67 --AQEAYGRRNMLLYFEHADVDAAFQDIAP-----HVELIHPL-ERQA------WG-------------QRVFRFYDPDG  119 (141)
T ss_dssp             ---CCCSCCSSCEEEEEESCHHHHHC-CGG-----GSCEEEEE-EECT------TS-------------CEEEEEECTTC
T ss_pred             --cccccCCCceEEEEEeCcHHHHHHHHHc-----CCccccCC-ccCC------CC-------------CEEEEEECCCC
Confidence              0011345789999999999999988865     55666555 2210      01             01334466778


Q ss_pred             eEEEEeccc
Q 016432          361 TLLQIFTKP  369 (389)
Q Consensus       361 ~llqift~~  369 (389)
                      +++.+++..
T Consensus       120 ~~iel~~~~  128 (141)
T 2qnt_A          120 HAIEVGESL  128 (141)
T ss_dssp             CEEEEEECC
T ss_pred             CEEEEEecc
Confidence            888887653

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.99  E-value=1.8e-05  Score=73.68  Aligned_cols=117  Identities=9%  Similarity=0.065  Sum_probs=74.0

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.+|+||++.|.|++++.+||+++|||++.....         +  ...+...+  ..|.|.....             
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---------~--~~~L~~g~--~~l~l~~~~~-------------   76 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---------D--AFTIQLGV--SQIQFRAAAD-------------   76 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---------S--EEEEEETT--EEEEEEECCT-------------
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---------C--EEEEEeCC--EEEEEEECCC-------------
Confidence            57899999999999999999999999999865421         1  23343332  4455543320             


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChh-hhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPT-YYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~-YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                        .+.++.|+||.++  |+++++++|+++     +++..++|.. -|.   .+.+             ...++=+|.+|.
T Consensus        77 --~~~~~~hiaf~V~~~dld~~~~rL~~~-----v~~~~~~~~~~~~~---~~~g-------------~~~~~f~DPdGn  133 (252)
T 3pkv_A           77 --GTKPFYHIAINIAANHFQEGKAWLSGF-----GELLTENDEDQAYF---PFFN-------------AYSCYVEDPSGN  133 (252)
T ss_dssp             --TCCCCCEEEEEECTTCHHHHHHHHTTS-----SCCCCBTTBSCEEE---TTTT-------------EEEEEEECTTCC
T ss_pred             --CCCCeeEEEEEecHHHHHHHHHHHHhc-----ceEeccCCcccccc---ccCC-------------eEEEEEECCCCC
Confidence              2346999999885  588888888765     2333311011 000   0111             123466778899


Q ss_pred             EEEEecccc
Q 016432          362 LLQIFTKPV  370 (389)
Q Consensus       362 llqift~~~  370 (389)
                      .+++++.+-
T Consensus       134 ~iEl~~~~~  142 (252)
T 3pkv_A          134 IIELISRQQ  142 (252)
T ss_dssp             EEEEEEESS
T ss_pred             EEEEEEeCC
Confidence            999998774

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=97.67  E-value=0.0003  Score=65.58  Aligned_cols=112  Identities=13%  Similarity=-0.052  Sum_probs=69.4

Q ss_pred             eEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc--ceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          210 DHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE--MVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       210 DHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g--~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      -|+.+.|.|++++++||+++|||+.......       .| ....+.....  ...+.+....   .           ..
T Consensus       185 ~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~---~-----------~~  242 (301)
T 2zw5_A          185 VITELPVRDVAATLRLVEAALGARTAFAIGD-------PP-EFAEAALTPWSAGPRFRLAAVP---G-----------PG  242 (301)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEET-------TE-EEEEEESSSSSSSSEEEEEECC---C-----------SS
T ss_pred             eEEEEEeCCHHHHHHHHHHhcCCeEeeecCC-------Cc-cEEEEEcCCCccccccccccCC---C-----------cC
Confidence            4778889999999999999999998754321       11 1112222210  0222221111   0           01


Q ss_pred             CCCcceEEEEeC-CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEe
Q 016432          288 GAGVQHLALVSE-DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF  366 (389)
Q Consensus       288 g~GvqHiAf~vd-DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqif  366 (389)
                      +.+-.|++|.|+ ||++++++++++    |++++.+| ....      .+             ....+=+|.+|.++.++
T Consensus       243 ~~~~~~~~~~v~~dvd~~~~~~~~~----G~~~~~~~-~~~~------~g-------------~~~~~~~DPdG~~~~~~  298 (301)
T 2zw5_A          243 PVEPVRLHLDAAGTADSLHRRAVDA----GARVDGPP-VRRP------WG-------------RSEFVITLPEGHELTVS  298 (301)
T ss_dssp             CCCCCEEEEEEESCHHHHHHHHHHT----TCCEEEEE-EECT------TS-------------CEEEEEECTTSCEEEEE
T ss_pred             CCCceEEEEEcCccHHHHHHHHHHc----CCccccCc-ccCC------Cc-------------ceEEEEECCCCCEEEee
Confidence            223468999999 999999999999    99998876 3210      01             01234566788888877


Q ss_pred             c
Q 016432          367 T  367 (389)
Q Consensus       367 t  367 (389)
                      +
T Consensus       299 ~  299 (301)
T 2zw5_A          299 A  299 (301)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.63  E-value=0.00027  Score=64.98  Aligned_cols=153  Identities=12%  Similarity=0.052  Sum_probs=88.3

Q ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEE-cC-CEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           33 FHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLR-SG-DLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        33 l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~-~g-~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      +-+..+.|.|.+++++||++.|||++....+     +   .+.+. .+ ...|+|.+.  |..          +      
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~-----~---~a~lg~~~~~~~L~lEEs--p~~----------~------   64 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES-----A---FLSLGDQTGLEKLVLEEA--PSM----------R------   64 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS-----S---EEEEECTTCCEEEEEEEC--CTT----------T------
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC-----c---EEEeecCCCcceEEEEeC--CCc----------c------
Confidence            5678999999999999999999999987653     1   22233 23 345556552  210          0      


Q ss_pred             hHHHHHHHHhcCCceeEE---EEEEcCHHHHHHHHHHCCCcccCCCeec--cCceEEEEEEecCCeEEEEeecCCCCC-C
Q 016432          111 HAACRSFAASHGLAARSI---AVEVEDADVAFNTSVAHGAKPSSPPVIL--DNLAVIAEVQLYGDVVLRYVSYKDKAN-H  184 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~i---af~V~Dvda~~~~a~a~Ga~~i~~P~~~--~~~~~~~~v~~~gg~~~~fve~~~~~~-~  184 (389)
                              ...-.|..|+   ++.|+|.+..- .+.++|.+.   |...  .+.+ .-.+.+|.|..+++.-..+.+. .
T Consensus        65 --------~~~~~Glkh~a~i~i~vp~~~el~-~lL~~~~~~---~~~~~gdhgy-A~yl~dPEGn~ieiyae~d~~~l~  131 (244)
T 3e0r_A           65 --------TRKVEGRKKLARLIVKVENPLEIE-GILSKTDSI---HRLYKGQNGY-AFEIFSPEDDLILIHAEDDIASLV  131 (244)
T ss_dssp             --------CBCCCSSCSEEEEEEEESSHHHHH-HHHTTCSCC---SEEEECSSSE-EEEEECTTCCEEEEECCSCGGGCE
T ss_pred             --------cccccccceeeeEEEEcCCHHHHH-HHHhccccc---ccccccCCcE-EEEEECCCCCeEEEEEcCCHHHhh
Confidence                    0123477777   59999987764 444555443   3211  1233 2344578888886654111110 0


Q ss_pred             CC-CCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCC
Q 016432          185 LD-FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGF  232 (389)
Q Consensus       185 g~-~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf  232 (389)
                      .. -.|+|+..+.    ..+..--.+ ||.++|+|.+++  ||+. +||
T Consensus       132 ~v~~~~~l~~~~~----~~gLs~fti-~I~LnV~d~~~s--Fy~~-~~~  172 (244)
T 3e0r_A          132 EVGEKPEFQTDLA----SISLSKFEI-SMELHLPTDIES--FLES-SEI  172 (244)
T ss_dssp             ECSSCCCCCCCCS----CCCCSSEEE-EEEEEECTTCCC--SCCH-HHH
T ss_pred             cccchhhcccccc----ccCCCCcEE-EEEEEcCchHHH--Hhhc-cCC
Confidence            00 1345532221    122222236 999999999888  9986 555

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.60  E-value=0.00075  Score=57.16  Aligned_cols=120  Identities=11%  Similarity=0.001  Sum_probs=68.0

Q ss_pred             EEEEecC-CHHHHHHHHHHhhCCeEeEEEecccccc----cc--cC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          211 HAVGNVP-ELAPAVAYVKSFTGFHEFAEFTAEDVGT----SE--SG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       211 Hv~~~V~-dl~~~~~fY~~~lGf~~~~~~~~~d~~~----~~--~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +..+.|. |++++++||+++||+++.......+...    +.  .+ +....+...+  ..|.+....+  ...      
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~l~~~d~~~--~~~------   75 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--FALMASDNHP--AYP------   75 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--EEEEEEECCT--TSC------
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC--EEEEEEcCCC--ccC------
Confidence            3678887 9999999999999999875432211000    00  02 1112222222  2333332210  000      


Q ss_pred             HhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          283 LEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                        .....| .+++|.|+|   +++++++|+ .    |.+++.+| ....  ...|.               ..+  .|..
T Consensus        76 --~~~~~g-~~l~~~v~d~~evd~~~~~l~-~----Gg~i~~p~-~~~~--wG~r~---------------~~v--~Dp~  127 (149)
T 1u6l_A           76 --YEGIKG-CSISLNVDSKAEAERLFNALA-E----GGSVQMPL-GPTF--WAASF---------------GMF--TDRF  127 (149)
T ss_dssp             --CCCCCS-EEEEEECSSHHHHHHHHHHHH-T----TSEEEEEE-EEET--TEEEE---------------EEE--ECTT
T ss_pred             --CCCCCc-eEEEEEcCCHHHHHHHHHHHH-C----CCEEeecc-cccC--cccce---------------EEE--ECCC
Confidence              001234 499999999   889999985 7    88888776 4321  11122               233  4567


Q ss_pred             ceEEEEecc
Q 016432          360 GTLLQIFTK  368 (389)
Q Consensus       360 g~llqift~  368 (389)
                      |+.+||.+.
T Consensus       128 G~~w~l~~~  136 (149)
T 1u6l_A          128 GVAWMVNCE  136 (149)
T ss_dssp             SCEEEEEES
T ss_pred             CCEEEEEEe
Confidence            888888764

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.42  E-value=0.0015  Score=54.24  Aligned_cols=94  Identities=11%  Similarity=0.053  Sum_probs=54.5

Q ss_pred             EEEecC--CHHHHHHHHHHhh-CCeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          212 AVGNVP--ELAPAVAYVKSFT-GFHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       212 v~~~V~--dl~~~~~fY~~~l-Gf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      ..+.|.  |++++++||+++| |++........+......+ +....+...+.  .+.+....   ..+ .   +   ..
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~--~~~~~~~~---~~~-~---~---~~   76 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--SVHCIDSH---VRH-A---F---DF   76 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEEEEES---SCC-S---C---CC
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE--EEEEECCC---CCC-C---C---CC
Confidence            557775  9999999999999 9998753221110000113 11122222222  23222221   000 0   0   01


Q ss_pred             CCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      +.+ .+++|.|+|   +++++++|+ +    |.+++.+|
T Consensus        77 ~~~-~~l~~~v~d~~evd~~~~~l~-~----Gg~v~~p~  109 (136)
T 1u7i_A           77 TPA-FSFFVDCESNAQIERLAEALS-D----GGKALMPL  109 (136)
T ss_dssp             CTT-EEEEEECCCHHHHHHHHHHHH-T----TSEEEEEE
T ss_pred             CCc-eEEEEEcCCHHHHHHHHHHHH-c----CCEEeccc
Confidence            223 479999999   999999999 8    99988876

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=97.25  E-value=0.0024  Score=53.69  Aligned_cols=123  Identities=11%  Similarity=0.083  Sum_probs=67.0

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhh-CCeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFT-GFHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~l-Gf~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +|...-+.+.|.++|++||+++| |+++.......+......| +....+...+.  .+.+....     + .   +   
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~--~~m~~d~~-----~-~---~---   70 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--VFMAIDAN-----S-G---T---   70 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--EEEEEC-----------------
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE--EEEEECCC-----C-C---C---
Confidence            34444444569999999999999 9998753221110000123 11122222221  22222111     0 0   0   


Q ss_pred             cCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       .. . -.+++.|+|   +++..++|+ .    |.+++.+| ..+.  ...|               .+.+.|  ..|.+
T Consensus        71 -~~-~-~sl~~~~~d~~evd~~~~~l~-~----G~~v~~p~-~~~~--wG~~---------------~g~v~D--p~G~~  122 (139)
T 1tsj_A           71 -EL-P-ISLFVTVKDTIEMERLFNGLK-D----EGAILMPK-TNMP--PYRE---------------FAWVQD--KFGVS  122 (139)
T ss_dssp             ----C-CCEEEECSSHHHHHHHHHHHH-T----TCEEEEEE-EEET--TEEE---------------EEEEEC--TTSCE
T ss_pred             -Cc-e-EEEEEECCCHHHHHHHHHHHh-C----CCEEeecc-cccC--CCce---------------EEEEEC--CCCCE
Confidence             11 1 479999988   888899998 7    88888877 4432  1222               334444  67899


Q ss_pred             EEEeccccCC
Q 016432          363 LQIFTKPVGD  372 (389)
Q Consensus       363 lqift~~~~~  372 (389)
                      .||.+.++.+
T Consensus       123 W~i~~~~~~~  132 (139)
T 1tsj_A          123 FQLALPEEGG  132 (139)
T ss_dssp             EEEEECC---
T ss_pred             EEEeeccccc
Confidence            9999877654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.97  E-value=0.0022  Score=60.26  Aligned_cols=100  Identities=12%  Similarity=0.096  Sum_probs=62.8

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhC-----CeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCC---
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTG-----FHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTK---  274 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lG-----f~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~---  274 (389)
                      ..++.++||+++.|+++        +.||     |++..--.-     +..|-....+..  +...|+|........   
T Consensus        19 ~~M~~~lDHlVi~v~~l--------~~lG~~~~~f~~~~GG~H-----~~~GT~N~Li~f--dg~YLElIai~~~~~~~~   83 (274)
T 3p8a_A           19 SHMILKFDHIIHYIDQL--------DRFSFPGDVIKLHSGGYH-----HKYGTFNKLGYI--NENYIELLDVENNEKLKK   83 (274)
T ss_dssp             --CCCEEEEEEEECTTG--------GGCCCGGGSSCCEEEEEE-----TTTTEEEEEEEC--SSSEEEEEEESCHHHHHH
T ss_pred             cCccccCCEEEEEeccH--------HHcCCccceEEeCCCccC-----CCCCCEEEEEee--CCEEEEEEeecCcccccc
Confidence            34789999999999988        4678     887653221     123544444444  345677655432100   


Q ss_pred             ----CCc--hHHHHH-hhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecC
Q 016432          275 ----RKS--QIQTYL-EHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       275 ----~~s--~i~~fl-~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                          ...  .+.+.+ ....|+|+.|+||.|+||.+..++|+++    |+....
T Consensus        84 ~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~----Gl~~~~  133 (274)
T 3p8a_A           84 MAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSE----QVEVVG  133 (274)
T ss_dssp             HTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTT----TCEEEE
T ss_pred             cccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHc----CCCcCC
Confidence                011  111111 1235789999999999999999999999    987654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=96.74  E-value=0.028  Score=48.53  Aligned_cols=85  Identities=21%  Similarity=0.289  Sum_probs=58.2

Q ss_pred             EEEEeC-CHHHHHHHHHHhc-CCcEEEEec-------CCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           36 VEFWCT-DATNTARRFSWGL-GMPIVAKSD-------LSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        36 I~~~V~-D~~~a~~fy~~~l-GF~~~~~~~-------~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      ..|+++ |+++|++||+++| |.++.....       +++| + .....++.|+..|.+... .|.              
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g-~-Vmhael~i~g~~~m~~d~-~p~--------------   71 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEG-D-VLTVEFRVMGIPCLGLNG-GPA--------------   71 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTT-S-EEEEEEEETTEEEEEEEC-CTT--------------
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCC-e-EEEEEEEECCEEEEEECC-CCC--------------
Confidence            456777 9999999999999 999875311       1123 2 344566778878777642 111              


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCccc
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPS  150 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i  150 (389)
                        +          ....++ .+.+.|+|   +|+.+++|.+.|++++
T Consensus        72 --~----------~~~~~~-sl~v~~~d~~e~d~~~~~L~~~Gg~v~  105 (163)
T 1u69_A           72 --F----------RHSEAF-SFQVATDDQAETDRLWNAIVDNGGEES  105 (163)
T ss_dssp             --C----------CCCTTE-EEEEEESSHHHHHHHHHHHHHTTCEEC
T ss_pred             --c----------CCCCce-EEEEEeCCHHHHHHHHHHHHhCCCEEE
Confidence              0          012344 68899987   7889999998898876

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=96.54  E-value=0.01  Score=51.76  Aligned_cols=122  Identities=12%  Similarity=0.153  Sum_probs=70.4

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEeccccccc--------ccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTS--------ESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~--------~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      --+++.|.++|++||+++||+++.......+...+        ..| +.-..+...  ...|.+.... + ..      +
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~--g~~lm~~D~~-g-~~------~   98 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL--GVKVLCSDSF-G-RA------D   98 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET--TEEEEEEECT-T-CC------C
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC--CEEEEEECCC-C-CC------C
Confidence            34555699999999999999997755443211000        024 222223332  2344444321 1 00      0


Q ss_pred             HhhcCCCCcceEEEEe--------CCHHHHHHHHHHhcCCCC-ceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCce
Q 016432          283 LEHNEGAGVQHLALVS--------EDIFRTLREMRKRSGVGG-FEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVL  353 (389)
Q Consensus       283 l~~~~g~GvqHiAf~v--------dDI~~a~~~l~~~~~~~G-v~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL  353 (389)
                         ..+.|+ .+++.+        +|+++.+++|++.    | ++++.+| ..+.      .+           ...+.+
T Consensus        99 ---~~~~~~-sl~l~~~~~d~~~~~dvd~~~~~l~~~----G~a~v~~p~-~~~~------wG-----------~r~g~v  152 (172)
T 3l20_A           99 ---KINNGI-SLLIDYDVNNKEDADKVEAFYEQIKDH----SSIEIELPF-ADQF------WG-----------GKMGVF  152 (172)
T ss_dssp             ---CCCSSE-EEEEEEETTCHHHHHHHHHHHHHHTTC----TTCEEEEEE-EECT------TS-----------SEEEEE
T ss_pred             ---CCCCcE-EEEEEEccCccCcHHHHHHHHHHHHhC----CCceEecCc-cccC------CC-----------cEEEEE
Confidence               123343 467777        6899999999999    9 7888876 4422      11           123344


Q ss_pred             eecCCCceEEEEeccccC
Q 016432          354 VDRDDQGTLLQIFTKPVG  371 (389)
Q Consensus       354 ~D~D~~g~llqift~~~~  371 (389)
                      .|  ..|...||-+.+..
T Consensus       153 ~D--pfG~~W~i~~~~~~  168 (172)
T 3l20_A          153 TD--KYGVRWMLHGQDYT  168 (172)
T ss_dssp             EC--TTSCEEEEEEECCS
T ss_pred             EC--CCCCEEEEEeCCCc
Confidence            44  67888998887753

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=95.39  E-value=0.12  Score=43.02  Aligned_cols=93  Identities=9%  Similarity=0.045  Sum_probs=52.2

Q ss_pred             EEecC-CHHHHHHHHHHhhC-CeEeEEEecccccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          213 VGNVP-ELAPAVAYVKSFTG-FHEFAEFTAEDVGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       213 ~~~V~-dl~~~~~fY~~~lG-f~~~~~~~~~d~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      -+.+. |.+++++||+++|| .++.....-.+......| +....+...  ...|.+.....+  ..     +   ..++
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~--g~~lm~~d~~~~--~~-----~---~~~~   81 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN--GQEFMCIDSYVN--HN-----F---TFTP   81 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET--TEEEEEEECSSC--CS-----C---CCCT
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC--CEEEEEEcCCCC--CC-----C---CCCC
Confidence            35555 89999999999999 565433221111011234 222223332  234444433211  00     0   0123


Q ss_pred             CcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCC
Q 016432          290 GVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       290 GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      + .++++.|+|   +++++++|+ .    |.+++.+|
T Consensus        82 ~-~~l~l~~~d~~evd~~~~~l~-~----Gg~v~~p~  112 (138)
T 3oms_A           82 A-MSLYVTCETEEEIDTVFHKLA-Q----DGAILMPL  112 (138)
T ss_dssp             T-SCEEEEESSHHHHHHHHHHHH-T----TCEEEEEE
T ss_pred             C-EEEEEEcCCHHHHHHHHHHHH-c----CCeEecCc
Confidence            3 579999999   999999995 5    66777766

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=95.20  E-value=0.077  Score=48.63  Aligned_cols=76  Identities=11%  Similarity=0.076  Sum_probs=50.2

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      +.+++|.+++..++||+++|||++..+-.           ....+....+...|.|-|++.   ...        ..-.|
T Consensus        13 ~p~LrV~nr~~~~~FY~~vlG~kll~ee~-----------~~a~lg~~~~~~~L~lEEsp~---~~~--------~~~~G   70 (244)
T 3e0r_A           13 IPTLKANNRKLNETFYIETLGMKALLEES-----------AFLSLGDQTGLEKLVLEEAPS---MRT--------RKVEG   70 (244)
T ss_dssp             EEEEEESSHHHHHHHHTTTTCCEEEEECS-----------SEEEEECTTCCEEEEEEECCT---TTC--------BCCCS
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEeeccC-----------cEEEeecCCCcceEEEEeCCC---ccc--------ccccc
Confidence            46899999999999999999999875422           234444444455677766441   111        13457


Q ss_pred             cceE---EEEeCCHHHHHHHH
Q 016432          291 VQHL---ALVSEDIFRTLREM  308 (389)
Q Consensus       291 vqHi---Af~vdDI~~a~~~l  308 (389)
                      +-|+   ++.++|-.+-..-|
T Consensus        71 lkh~a~i~i~vp~~~el~~lL   91 (244)
T 3e0r_A           71 RKKLARLIVKVENPLEIEGIL   91 (244)
T ss_dssp             SCSEEEEEEEESSHHHHHHHH
T ss_pred             cceeeeEEEEcCCHHHHHHHH
Confidence            7777   59999865544433

>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}

Probab=90.86  E-value=0.12  Score=47.81  Aligned_cols=41  Identities=17%  Similarity=0.315  Sum_probs=33.9

Q ss_pred             CchHHHHHhhcCCCCcceEEEEe------CCHHHHHHHHHHhcCCCCceecC
Q 016432          276 KSQIQTYLEHNEGAGVQHLALVS------EDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       276 ~s~i~~fl~~~~g~GvqHiAf~v------dDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      .|+...++..+ |..++|+..+|      .||++..+.|+++    |+.+-+
T Consensus       149 ese~aAWv~~~-G~~~NH~T~~v~~L~~~~dI~~v~~~l~~~----G~~~n~  195 (267)
T 3lho_A          149 ESEYAAWVAAL-GYRANHFTVSINDLPEFERIEDVNQALKQA----GFVLNS  195 (267)
T ss_dssp             HCHHHHHHHHH-CBSCSEEEEETTTCTTCCCHHHHHHHHHHT----TCCBCC
T ss_pred             hChHHHHHhhc-CCccceeehhhcccCCCCCHHHHHHHHHHc----CCCccc
Confidence            35666677764 68899999999      9999999999999    986554

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=90.47  E-value=0.6  Score=50.58  Aligned_cols=105  Identities=15%  Similarity=0.174  Sum_probs=62.5

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      ..+.-++.....++++++||.++|+++.....        .+-+.+..+.+.++.+.+.+.-.........+++..++..
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (941)
T 3opy_B           11 SFITLFAPNISLLQASIDFYTNFLGFAIRKNS--------NQKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNL   82 (941)
T ss_dssp             EEEEEECCC-CC-HHHHHHHHHTTCCEECSSC--------SCCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhhccceecccc--------CCcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhh
Confidence            33444444556899999999999999764311        1225567777777776666543311002233444333321


Q ss_pred             CC--------CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          287 EG--------AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       287 ~g--------~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..        .-..|++|.|.||.+..+.|.+.    +.++-..|
T Consensus        83 ~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~----~~~~Q~~p  123 (941)
T 3opy_B           83 TRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDG----GHPVQQSP  123 (941)
T ss_dssp             C----------CCCEEEEEESCHHHHHHHHHTT----TCCCBCSS
T ss_pred             hcccccccccccCceEEEEeCCHHHHHHHHHhc----CCccccCC
Confidence            11        11459999999999999999999    88776665

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=87.71  E-value=7.2  Score=33.23  Aligned_cols=88  Identities=10%  Similarity=-0.034  Sum_probs=48.5

Q ss_pred             EecC-CHHHHHHHHHHhh-CCeEeEEEeccc-ccccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          214 GNVP-ELAPAVAYVKSFT-GFHEFAEFTAED-VGTSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       214 ~~V~-dl~~~~~fY~~~l-Gf~~~~~~~~~d-~~~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      +++. +.+++++||+++| |.+........+ +..+..| +...-+...++  .|.+....+         .|   ...+
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~--~~m~~d~~p---------~~---~~~~   76 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI--PCLGLNGGP---------AF---RHSE   76 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE--EEEEEECCT---------TC---CCCT
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE--EEEEECCCC---------Cc---CCCC
Confidence            4555 9999999999999 999874322211 1111124 22222333222  333332211         01   0123


Q ss_pred             CcceEEEEeCC---HHHHHHHHHHhcCCCCceec
Q 016432          290 GVQHLALVSED---IFRTLREMRKRSGVGGFEFM  320 (389)
Q Consensus       290 GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l  320 (389)
                      |+ .+.+.|+|   +++..++|.+.    |.+.+
T Consensus        77 ~~-sl~v~~~d~~e~d~~~~~L~~~----Gg~v~  105 (163)
T 1u69_A           77 AF-SFQVATDDQAETDRLWNAIVDN----GGEES  105 (163)
T ss_dssp             TE-EEEEEESSHHHHHHHHHHHHHT----TCEEC
T ss_pred             ce-EEEEEeCCHHHHHHHHHHHHhC----CCEEE
Confidence            44 78889988   77788999876    65544

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=87.41  E-value=1.5  Score=42.02  Aligned_cols=41  Identities=15%  Similarity=0.216  Sum_probs=34.2

Q ss_pred             CchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecC
Q 016432          276 KSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       276 ~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~  321 (389)
                      .|....++..+ |..++|+..+|.||++..+.|+++    |++.-+
T Consensus       222 eS~~AAWva~~-G~~iNHlT~rv~DId~v~~~m~~~----G~~~k~  262 (340)
T 3iuz_A          222 ESAEMAWIATE-GNAFNHATDRVDDVFGLSEQQXAL----GRPMXD  262 (340)
T ss_dssp             HCHHHHHHHHH-TTSCSEEEEECSCHHHHHHHHHHT----TCCBCS
T ss_pred             hChHHhhhhhc-CCccccccCCcCCHHHHHHHHHHc----CCChhh
Confidence            45667777764 678999999999999999999999    996544

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=80.93  E-value=2.7  Score=45.51  Aligned_cols=137  Identities=8%  Similarity=0.030  Sum_probs=70.5

Q ss_pred             CCCcceEEEEEEEeCC---HHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEE--EcCCEEEEEEccCCCCCccccccCC
Q 016432           27 RFRVNRFHHVEFWCTD---ATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLL--RSGDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D---~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~--~~g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      .+.+.+...+.++..+   .+++++||++.+++......    . .|.-+..+  .++.+.+.+.-.. .++........
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   77 (941)
T 3opy_B            4 ASLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNS----N-QKLFWLQLEEDQNNVSIQLILDP-EHAASVSQIDQ   77 (941)
T ss_dssp             -CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSC----S-CCC---EECCTTSCCEEEEECSS-CSCHHHHHHHH
T ss_pred             CceecceeEEEEEeCCHHHHHHHHHHHHhhccceecccc----C-CcceeEEEecCCCeEEEEEEecc-ccchhHHHHHH
Confidence            3457888888887755   55899999998888654321    1 12223444  3344555444211 11100000000


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      ....+..  .....+|.   + -..+++|.|.|++++.+.|.+.+.++-..|...  ...-..+.+|.|..+.|-+
T Consensus        78 ~~~~~~~--~~~~~dW~---~-~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~--~~~e~yt~DPlGNvIgfs~  145 (941)
T 3opy_B           78 NIRNLTR--SLYRKDWR---S-IQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI--SPFEVYTVDPLGSLIGFSG  145 (941)
T ss_dssp             HHHCCC----------------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC--SCEEECCSSCCEEEECC-C
T ss_pred             HHhhhhc--cccccccc---c-cCceEEEEeCCHHHHHHHHHhcCCccccCCCcC--CCceEEeECCCCCEEEEec
Confidence            0000000  00111111   1 234899999999999999999998765556532  1223334478888887765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	389
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	2e-66
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-54
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-53
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	2e-42
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	8e-40
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-39
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	6e-33
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	8e-05
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	8e-23
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	5e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	2e-19
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	9e-04
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	4e-14
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	8e-04

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  208 bits (531), Expect = 2e-66
 Identities = 157/187 (83%), Positives = 175/187 (93%)

Query: 187 FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTS 246
           FLPGFE  ++ SSFPLDYGIRRLDHAVGNVPEL PA+ YV  FTGFH+FAEFTA+DVGT+
Sbjct: 1   FLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTA 60

Query: 247 ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLR 306
           ESGLNS VLA+NDEMVLLP+NEPV GTKRKSQIQTYLEHNEGAG+QHLAL+SEDIFRTLR
Sbjct: 61  ESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 120

Query: 307 EMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIF 366
           EMRKRS +GGF+FMPSPPPTYY+NLK R GDVL+D+QIK+CEELG+LVDRDDQGTLLQIF
Sbjct: 121 EMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIF 180

Query: 367 TKPVGDR 373
           TKP+GDR
Sbjct: 181 TKPLGDR 187

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score =  176 bits (447), Expect = 4e-54
 Identities = 126/171 (73%), Positives = 144/171 (84%)

Query: 203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMV 262
           DYG+ R DH VGNVPELAPA AY   FTGFHEFAEFT EDVGT+ESGLNS+VLANN E V
Sbjct: 4   DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENV 63

Query: 263 LLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPS 322
           LLP+NEPV GTKR+SQIQT+L+H+ G GVQH+AL S+D+ RTLREM+ RS +GGFEFM  
Sbjct: 64  LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP 123

Query: 323 PPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
           P   YY  ++ RAGDVLT+ QIK+C+ELGVLVDRDDQG LLQIFTKPVGDR
Sbjct: 124 PTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDR 174

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 2e-53
 Identities = 73/191 (38%), Positives = 101/191 (52%), Gaps = 9/191 (4%)

Query: 188 LPGFEP---TDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAED 242
           LPGFE     D +        +  +DH VGN P  E+  A  +      FH F       
Sbjct: 1   LPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQ 60

Query: 243 VGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIF 302
           V T  S L S+V+AN +E + +P+NEP  G ++KSQIQ Y+++N GAGVQH+AL +EDI 
Sbjct: 61  VHTEYSSLRSIVVANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDII 119

Query: 303 RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL 362
            T+R +R+R   G                  +   +   E +   EEL +LVD D++G L
Sbjct: 120 TTIRHLRER---GMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYL 176

Query: 363 LQIFTKPVGDR 373
           LQIFTKP+ DR
Sbjct: 177 LQIFTKPMQDR 187

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score =  145 bits (367), Expect = 2e-42
 Identities = 71/169 (42%), Positives = 90/169 (53%), Gaps = 10/169 (5%)

Query: 207 RRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLL 264
           + +DH VGNV    +   V +     GF    EF  +D+ T  S L S V+A+    V  
Sbjct: 5   QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKF 64

Query: 265 PMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPP 324
           P+NEP    K+KSQI  YLE   GAGVQH+AL + DI  T+R MR      G +F+   P
Sbjct: 65  PINEPAL-AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAA----GVQFLD-TP 118

Query: 325 PTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDR 373
            +YY  L    GD      +    EL +L DRD+ G LLQIFTKPV DR
Sbjct: 119 DSYYDTLGEWVGDT--RVPVDTLRELKILADRDEDGYLLQIFTKPVQDR 165

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score =  138 bits (349), Expect = 8e-40
 Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 17/175 (9%)

Query: 205 GIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMV 262
           G++ +DH   NV    +     + +    F E   F   D+    +GL S  ++  D M+
Sbjct: 2   GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYF---DIKGEYTGLTSKAMSAPDGMI 58

Query: 263 LLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPS 322
            +P+NE    +K   QI+ +L    G G+QH+A +++D+ +T   ++K        FM +
Sbjct: 59  RIPLNEE--SSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIG----MRFMTA 112

Query: 323 PPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD----DQGTLLQIFTKPVGDR 373
           PP TYY+ L+ R  D    E + Q +  G+L+D      D+  LLQIF++ +   
Sbjct: 113 PPDTYYEMLEGRLPDH--GEPVDQLQARGILLDGSSVEGDKRLLLQIFSETLMGP 165

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score =  134 bits (339), Expect = 9e-39
 Identities = 101/174 (58%), Positives = 118/174 (67%), Gaps = 6/174 (3%)

Query: 20  RQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG 79
           R NP+SDRF    FHHVE WC DA + A RFS+GLG P+ A+SDLSTGN+ HAS LLRSG
Sbjct: 1   RFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG 60

Query: 80  DLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAF 139
            L F+FTAPY+     A  A      LP+F  AA R FAA HGLA R++A+ V DA+ AF
Sbjct: 61  SLSFLFTAPYAHGADAATAA------LPSFSAAAARRFAADHGLAVRAVALRVADAEDAF 114

Query: 140 NTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEP 193
             SVA GA+P+  PV L     +AEV+LYGDVVLRYVSY D A    FLPGFE 
Sbjct: 115 RASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEG 168

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 19/130 (14%), Positives = 32/130 (24%), Gaps = 16/130 (12%)

Query: 204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVL 263
           +      H      + A A        G    A     D+ T  S   S++L +     L
Sbjct: 9   FHTLAFHHVELWCADAASAAGRFSFGLGAPLAAR---SDLSTGNSAHASLLLRSGSLSFL 65

Query: 264 L--------PMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVG 315
                            +   +  + +   + G  V+ +AL   D     R         
Sbjct: 66  FTAPYAHGADAATAALPSFSAAAARRFAADH-GLAVRAVALRVADAEDAFRASVAA---- 120

Query: 316 GFEFMPSPPP 325
           G      P  
Sbjct: 121 GARPAFGPVD 130

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  119 bits (298), Expect = 6e-33
 Identities = 111/159 (69%), Positives = 133/159 (83%)

Query: 21  QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD 80
           +NPKSD+F+V RFHH+EFWC DATN ARRFSWGLGM   AKSDLSTGN VHASYLL SGD
Sbjct: 1   KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD 60

Query: 81  LRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFN 140
           LRF+FTAPYSPS+S       ++AS+P+FDH +CRSF +SHGL  R++A+EVEDA+ AF+
Sbjct: 61  LRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFS 120

Query: 141 TSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK 179
            SVA+GA PSSPP++L+    IAEV+LYGDVVLRYVSYK
Sbjct: 121 ISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK 159

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.6 bits (94), Expect = 8e-05
 Identities = 18/143 (12%), Positives = 35/143 (24%), Gaps = 23/143 (16%)

Query: 204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVL 263
           + ++R  H      +            G    A+              S +L + D   L
Sbjct: 8   FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNM---VHASYLLTSGDLRFL 64

Query: 264 L--------------PMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMR 309
                          P       +      +++   +   GV+ +A+  ED         
Sbjct: 65  FTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGL-GVRAVAIEVEDAESAFSISV 123

Query: 310 KRSGVGGFEFMPSPPPTYYKNLK 332
                 G     SPP    + + 
Sbjct: 124 AN----GAIPS-SPPIVLNEAVT 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 91.8 bits (227), Expect = 8e-23
 Identities = 49/179 (27%), Positives = 68/179 (37%), Gaps = 20/179 (11%)

Query: 26  DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVF 85
           D F V     V F   +A   A  +S   GM +VA S    G+   ASY+L +G  RFV 
Sbjct: 1   DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVL 60

Query: 86  TAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAH 145
           T+   P+               T          A HG     +A+EV DA  A   ++ H
Sbjct: 61  TSVIKPA---------------TPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEH 105

Query: 146 GAKPSSPPVILDNL---AVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFP 201
           GA+  + P  L +     V+A +  YG      V          +LPG+     I   P
Sbjct: 106 GARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDG--PYLPGYVAAAPIVEPP 162

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 28/156 (17%), Positives = 42/156 (26%), Gaps = 14/156 (8%)

Query: 204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVL 263
           + ++ +D  V  V     A  Y  +  G    A    E+         S VL N     +
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSR---ETASYVLTNGSARFV 59

Query: 264 LPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP 323
           L                   EH  G GV  LA+   D         +     G   +  P
Sbjct: 60  LTSVIKPATPWGHFLADHVAEH--GDGVVDLAIEVPDARAAHAYAIEH----GARSVAEP 113

Query: 324 PPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ 359
                ++       + T       +    LVDR   
Sbjct: 114 YELKDEHGTVVLAAIAT-----YGKTRHTLVDRTGY 144

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 2e-19
 Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 21/161 (13%)

Query: 23  PKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLR 82
           PK +R R   FH V FW  +A   A  +   +G   +A   L TG+    S++++ G + 
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 83  FVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTS 142
           FV  +  +P   +  D                      HG   + IA EVED +     +
Sbjct: 62  FVLCSALNPWNKEMGD------------------HLVKHGDGVKDIAFEVEDCEHIVQKA 103

Query: 143 VAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKD 180
              GAK    P + ++       A +Q YGD     V   +
Sbjct: 104 RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN 144

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 9e-04
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 12/130 (9%)

Query: 201 PLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE 260
           P              V     A ++   +     F     + + T    + S V+     
Sbjct: 4   PERGRFLHFHSVTFWVGNAKQAASF---YCNKMGFEPLAYKGLETGSREVVSHVIKQGKI 60

Query: 261 MVLLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFM 320
           + +L             ++  +L  + G GV+ +A   ED    +++ R+R    G + +
Sbjct: 61  VFVLCSAL----NPWNKEMGDHLVKH-GDGVKDIAFEVEDCEHIVQKARER----GAKIV 111

Query: 321 PSPPPTYYKN 330
             P     K 
Sbjct: 112 REPWVEEDKF 121

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 66.9 bits (163), Expect = 4e-14
 Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 34/181 (18%)

Query: 21  QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD 80
           +NP      +  F  +EF       T       +G   V        +     +L R G+
Sbjct: 2   ENP----MGLMGFEFIEFASPTP-GTLEPIFEIMGFTKV------ATHRSKNVHLYRQGE 50

Query: 81  LRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFN 140
           +  +     +   S                      FAA HG +   +A  V+D+  A+N
Sbjct: 51  INLILNNEPNSIASY---------------------FAAEHGPSVCGMAFRVKDSQKAYN 89

Query: 141 TSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSF 200
            ++  GA+P            +  ++  G   L  +    + + + +   F   + +   
Sbjct: 90  RALELGAQPIHIDT-GPMELNLPAIKGIGGAPLYLIDRFGEGSSI-YDIDFVYLEGVERN 147

Query: 201 P 201
           P
Sbjct: 148 P 148

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 37.3 bits (85), Expect = 8e-04
 Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 9/120 (7%)

Query: 206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLP 265
              +DH     P+   A  Y +   G+HE       + G  E  +               
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMT---- 60

Query: 266 MNEPVFGTKRKSQIQTYL-EHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPP 324
             + +     +S +  +L +HN  AG+ H+A   +DI      +R+R    G + +   P
Sbjct: 61  QVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRER----GVQLLYDEP 116

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	389
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	100.0
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	100.0
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	100.0
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	100.0
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	100.0
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.94
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.93
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.92
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.92
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.9
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.82
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.74
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.73
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.64
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.63
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.61
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.56
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.55
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.5
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.46
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.46
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.44
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.42
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.4
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.33
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.32
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.3
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.3
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.29
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.28
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.27
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.27
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.25
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.24
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.24
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.23
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.18
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.17
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.17
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.16
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.16
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.16
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.15
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.14
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.13
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.13
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.12
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.12
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.11
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.01
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.97
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.95
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	98.92
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.92
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.92
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	98.91
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	98.9
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	98.9
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.88
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	98.87
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	98.87
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	98.87
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.79
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.78
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	98.76
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.74
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.72
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.46
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	98.32
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.19
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.15
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.14
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	97.92
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	97.74
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.06
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	95.42
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	89.7
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	89.6

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-53  Score=383.68  Aligned_cols=195  Identities=40%  Similarity=0.659  Sum_probs=162.8

Q ss_pred             CCCCccCCCCCC---CCccccceeEeEEEEecCC--HHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcce
Q 016432          188 LPGFEPTDEISS---FPLDYGIRRLDHAVGNVPE--LAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMV  262 (389)
Q Consensus       188 lp~f~~~~~~~~---~~~~~~~~~iDHv~~~V~d--l~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v  262 (389)
                      ||||+++.....   ..++.++++||||+++|++  |++|+.||+++|||++.+.++.+++.++.++++|+++.++++.+
T Consensus         1 lPGf~~~~~~~~~~~~~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i   80 (210)
T d1sqia2           1 LPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESI   80 (210)
T ss_dssp             STTCBSCSSCCTTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCC
T ss_pred             CcCcccCCccCcccccCCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccc
Confidence            567765432211   1235689999999999985  99999999999999999888777777788889999999999999


Q ss_pred             EEEeccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhC--CCCC
Q 016432          263 LLPMNEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAG--DVLT  340 (389)
Q Consensus       263 ~l~l~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~--~~~~  340 (389)
                      +++|+++.++ ...|||++||+.++|+|||||||.|+||.+++++|+++    |++||++| ++||++|.+|+.  ..+.
T Consensus        81 ~~~lne~~~~-~~~sqi~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~----Gv~fL~~P-~~YY~~l~~r~~~~~~~~  154 (210)
T d1sqia2          81 KMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRER----GMEFLAVP-SSYYRLLRENLKTSKIQV  154 (210)
T ss_dssp             EEEEEECC------CHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHH----TCCBCCCC-HHHHHHHHHHHHTCSSCC
T ss_pred             cccccccCCC-CcccHHHHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHc----CCCCCCCC-cchhhhHHhhhhcccccc
Confidence            9999998754 57899999999999999999999999999999999999    99999998 999999999976  3467


Q ss_pred             hhhHHHHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          341 DEQIKQCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       341 ~~~~~~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      .+++++|+++|||||+|++|+||||||+|+++|||||||||||+|+.|
T Consensus       155 ~~~~~~l~~~~IL~D~d~~g~llqifT~~~~~~~~~FfEiIqR~g~~G  202 (210)
T d1sqia2         155 KENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQG  202 (210)
T ss_dssp             CSCHHHHHHHTCEEECCTTCEEEEEEBCCSSSSSCCEEEEEEEESCCC
T ss_pred             cccHHHHHhcCEEEecCCCCeEEEEeecCcCCCCceEEEEEEECCCCc
Confidence            889999999999999999999999999999999999999999999876

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.1e-52  Score=383.74  Aligned_cols=198  Identities=78%  Similarity=1.264  Sum_probs=170.3

Q ss_pred             CCCCCccCCCCCCCCccccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEe
Q 016432          187 FLPGFEPTDEISSFPLDYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPM  266 (389)
Q Consensus       187 ~lp~f~~~~~~~~~~~~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l  266 (389)
                      |||||++++.....+.+.++++||||+++|+||++|++||+++|||+..+....+++.+..++++|.++.++++.+++++
T Consensus         1 flPGf~~~~~~~~~~~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l   80 (230)
T d1sqda2           1 FLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPI   80 (230)
T ss_dssp             CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEE
T ss_pred             CCCCCEeCCccccCCCCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeE
Confidence            78999988765434456689999999999999999999999999999999888777777788899999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceec-CCCChhhhHhHhhhhCCCCChhhHH
Q 016432          267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFM-PSPPPTYYKNLKNRAGDVLTDEQIK  345 (389)
Q Consensus       267 ~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l-~~P~~~YY~~l~~r~~~~~~~~~~~  345 (389)
                      +|+..+.+..|+|++||++++|+|+|||||.|+||.+++++|++++...|++|+ ++| ++||++|.+|++..+.+++++
T Consensus        81 ~E~~~~~~~~sqi~~FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p-~~YY~~l~~r~~~~l~~~~~~  159 (230)
T d1sqda2          81 NEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPP-PTYYQNLKKRVGDVLSDDQIK  159 (230)
T ss_dssp             EEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCC-HHHHHHHHHHHTTTSCHHHHH
T ss_pred             EeecCCCCCcchHHHHHhhccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCc-hHHHHHHHHHhccccchHhHH
Confidence            998654467899999999999999999999999999999999997222366676 555 999999999999778899999


Q ss_pred             HHHHcCceeecCCCceEEEEeccccCCCCceEEEEEEecC
Q 016432          346 QCEELGVLVDRDDQGTLLQIFTKPVGDRYVHLLMLVTTFS  385 (389)
Q Consensus       346 ~l~~~~IL~D~D~~g~llqift~~~~~~~~~FfE~iqR~~  385 (389)
                      +|+++|||||+|++|+||||||+|+++|||||||||||+|
T Consensus       160 ~l~~~~IL~D~d~~g~llqifT~~~~~~~t~FfEiIqR~G  199 (230)
T d1sqda2         160 ECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVG  199 (230)
T ss_dssp             HHHHHTCEEEECSSEEEEEEEBCCSSSSSCCEEEEEEEEE
T ss_pred             HHHHcCCcccCCCCCeEEEEeccccCCCCCcEEEEEEecC
Confidence            9999999999999999999999999999999999999987

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=100.00  E-value=9e-52  Score=373.26  Aligned_cols=176  Identities=40%  Similarity=0.654  Sum_probs=166.8

Q ss_pred             cceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          205 GIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       205 ~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      .+++||||+++|+  +|++|+.||+++|||++.+++..+++.++.++++|.++.++++.++++||++.+. ...|+|++|
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~-~~~s~i~~F   81 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALA-KKKSQIDEY   81 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCS-SSCCHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCcc-ccccchhhh
Confidence            5789999999998  9999999999999999998877777777778899999999999999999988754 678999999


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      |++++|+|||||||.|+||.+++++|+++    |++||++| ++||++|.+|++  +.++++++|+++|||||+|++|+|
T Consensus        82 L~~~~g~GiQHIAl~tdDI~~av~~L~~~----G~~fL~~p-~~YY~~l~~r~~--~~~~~~~~l~~~~IL~D~d~~g~l  154 (199)
T d1t47a2          82 LEFYGGAGVQHIALNTGDIVETVRTMRAA----GVQFLDTP-DSYYDTLGEWVG--DTRVPVDTLRELKILADRDEDGYL  154 (199)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHT----TCCBCCCC-GGGTTSHHHHHC--CCSSCHHHHHHHTCEEEECSSCEE
T ss_pred             hhhcCCCcceEEEEEcCCHHHHHHHHHHc----CCCCCCCC-hHHHHHHHHHhc--ccccCHHHHHhcCeEEecCCCCeE
Confidence            99999999999999999999999999999    99999999 999999999999  789999999999999999999999


Q ss_pred             EEEeccccCCCCceEEEEEEecCCCC
Q 016432          363 LQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       363 lqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      |||||+|+++|||||||||||+|+.|
T Consensus       155 lqift~~~~~~~~~FfEiiqR~g~~G  180 (199)
T d1t47a2         155 LQIFTKPVQDRPTVFFEIIERHGSMG  180 (199)
T ss_dssp             EEEEBCCSSSSSCCEEEEEEEEBCCC
T ss_pred             EEEEecccCCCCceeEEEEEEcCCCC
Confidence            99999999999999999999999876

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=100.00  E-value=2e-48  Score=358.08  Aligned_cols=183  Identities=69%  Similarity=1.137  Sum_probs=161.8

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +.++++||||+++|+||++|+.||+++|||+..+++..+++.++..++++.++.++++.++++++++..+....|++++|
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            45799999999999999999999999999999999888778778889999999999999999999886444678999999


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      |+.++|+|+|||||.|+||.++++.|++++-..|++|+.+||.+||+++.+|.+..+.++++++|+++|||||+|++|+|
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p~~~Yy~~~~~~~~~~l~~~~~~~l~~~~iL~D~d~~g~l  163 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVL  163 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEE
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccccccceecccchhhhhhhHHhhccccccHHHHHHHHHhCCCCCCCCCCEE
Confidence            99999999999999999999999999988323367799988789999999999877889999999999999999999999


Q ss_pred             EEEeccccCCCCceEEEEEEecC
Q 016432          363 LQIFTKPVGDRYVHLLMLVTTFS  385 (389)
Q Consensus       363 lqift~~~~~~~~~FfE~iqR~~  385 (389)
                      |||||+|+++|||||||||||+|
T Consensus       164 lQifT~~~~~~~~~FfEiIqR~g  186 (224)
T d1sp8a2         164 LQIFTKPVGDRPTLFLEIIQRIG  186 (224)
T ss_dssp             EEEEBCCSSSSSCCEEEEEEEEE
T ss_pred             EEEeeecccCCCCeEEEEEEecC
Confidence            99999999999999999999976

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=100.00  E-value=9.1e-47  Score=342.44  Aligned_cols=172  Identities=28%  Similarity=0.493  Sum_probs=157.0

Q ss_pred             ccceeEeEEEEecC--CHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHH
Q 016432          204 YGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       204 ~~~~~iDHv~~~V~--dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      +++++||||+++|+  +|++|+.||+++|||++.++++.+   +...+++|.++.++++.++++++++..  ...||+++
T Consensus         1 AGl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~---~~~~~l~s~~~~~~~~~~~~~l~~~~~--~~~sqi~~   75 (203)
T d1cjxa2           1 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIK---GEYTGLTSKAMSAPDGMIRIPLNEESS--KGAGQIEE   75 (203)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEE---CSSCEEEEEEEECTTSSCEEEEEEECT--TCCSHHHH
T ss_pred             CCCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecC---CCcceEEEEEeeccccccceecccCCC--CCccHHHH
Confidence            36899999999997  999999999999999998877643   345668999999999999999998864  57899999


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecC----
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRD----  357 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D----  357 (389)
                      |++.++|+|+|||||.|+||.+|++.|+++    |++||++||.+||++|.+|++  +.++++++|+++|||||+|    
T Consensus        76 fl~~~~g~GiqHIAf~vdDI~aav~~L~~~----Gv~fL~~pp~~Yy~~l~~~~~--~~~~~~~~l~~~~iL~D~d~~~~  149 (203)
T d1cjxa2          76 FLMQFNGEGIQHVAFLTDDLVKTWDALKKI----GMRFMTAPPDTYYEMLEGRLP--DHGEPVDQLQARGILLDGSSVEG  149 (203)
T ss_dssp             HHHHHTSSBCCEEEEEESCHHHHHHHHHHT----TCCBCCCCCHHHHHTHHHHST--TCCCCHHHHHHHTCEEEEEEETT
T ss_pred             HHHhcCCCCCceEEEEeCCHHHHHHHHHhc----CCccccCchhhHHHHHHHhhc--cccchHHHHHHcCEEEecCCCCC
Confidence            999999999999999999999999999999    999999987889999999998  6889999999999999976    


Q ss_pred             CCceEEEEeccccCCCCceEEEEEEecCCCC
Q 016432          358 DQGTLLQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       358 ~~g~llqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      ++|+||||||+|+++  |||||||||+|++|
T Consensus       150 ~~~~llqifT~~~~~--~~FfEiiqR~g~~G  178 (203)
T d1cjxa2         150 DKRLLLQIFSETLMG--PVFFEFIQRKGDDG  178 (203)
T ss_dssp             EEEEEEEEEBCCCBT--TBEEEEEEEEBCCS
T ss_pred             CCceEEEEeccCCCC--CeEEEEEEEcCCCc
Confidence            468999999999986  69999999999887

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.94  E-value=2e-26  Score=202.43  Aligned_cols=167  Identities=59%  Similarity=0.946  Sum_probs=139.8

Q ss_pred             cCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccC
Q 016432           21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        21 ~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      -||.++++++++++||+|+|+|++++++||+++|||+++++.....+.++..+..+++|++.++++.+........    
T Consensus         2 ~~~~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   77 (172)
T d1sp8a1           2 FNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAA----   77 (172)
T ss_dssp             CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGG----
T ss_pred             CCCCCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhh----
Confidence            5899999999999999999999999999999999999999877666666677888899999999987654321110    


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCC
Q 016432          101 NSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD  180 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~  180 (389)
                        ....+.........++..||.|++||||+|+|+++++++|+++|++++.+|....++++++.|+++|+++|+|||+. 
T Consensus        78 --~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~-  154 (172)
T d1sp8a1          78 --TAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP-  154 (172)
T ss_dssp             --GCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC-
T ss_pred             --hcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC-
Confidence              01111223467888999999999999999999999999999999999999998778899999999999999999963 


Q ss_pred             CCCCC--CCCCCCccCC
Q 016432          181 KANHL--DFLPGFEPTD  195 (389)
Q Consensus       181 ~~~~g--~~lp~f~~~~  195 (389)
                       .+.+  .|||||++++
T Consensus       155 -~~~~~~~~lpg~~~~~  170 (172)
T d1sp8a1         155 -DGAAGEPFLPGFEGVA  170 (172)
T ss_dssp             -TTGGGSSSSTTCEECC
T ss_pred             -CCCCCCccCCCCEeCC
Confidence             3445  5899999875

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.93  E-value=7.2e-26  Score=196.74  Aligned_cols=153  Identities=29%  Similarity=0.436  Sum_probs=131.7

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      ++.|.+|+||+|+|+|+++|++||+++|||+++.+...+.+.+...+.+++++++.|+|+++..+.++..          
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~----------   71 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWG----------   71 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHH----------
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccc----------
Confidence            4579999999999999999999999999999999887776666777889999999999999865542110          


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEeecCCCCC
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKAN  183 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve~~~~~~  183 (389)
                           .....++..||.|++||||+|+|+++++++|+++|++++.+|+...+   .+.++.|+++||..|+|+|+  .++
T Consensus        72 -----~~~~~~~~~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier--~~~  144 (163)
T d1t47a1          72 -----HFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR--TGY  144 (163)
T ss_dssp             -----HHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE--EEE
T ss_pred             -----cccchhhhcCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEec--cCC
Confidence                 34677888999999999999999999999999999999999876433   46789999999999999996  567


Q ss_pred             CCCCCCCCccCCC
Q 016432          184 HLDFLPGFEPTDE  196 (389)
Q Consensus       184 ~g~~lp~f~~~~~  196 (389)
                      ++.|||+|++...
T Consensus       145 ~g~flp~~~~~~~  157 (163)
T d1t47a1         145 DGPYLPGYVAAAP  157 (163)
T ss_dssp             CSSSSTTCEECCC
T ss_pred             CCccCCCCCcCCC
Confidence            7899999988754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.2e-24  Score=189.57  Aligned_cols=159  Identities=70%  Similarity=1.174  Sum_probs=130.3

Q ss_pred             cCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccC
Q 016432           21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        21 ~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      +||.+.++.+.+|+||+|+|+|++++++||++.|||++..+...+.+.....+..+++++..++++.+............
T Consensus         1 ~~p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   80 (167)
T d1sqda1           1 KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKP   80 (167)
T ss_dssp             CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGG
T ss_pred             CCCCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccc
Confidence            48999999999999999999999999999999999999998776666666677888999999998876432110000000


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecC
Q 016432          101 NSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYK  179 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~  179 (389)
                      ......+....+++.++++.|+.|++||||+|+|+++++++|+++|++++.+|....++.+++.|+++|+++|+||||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1          81 TTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             GCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecC
Confidence            0111223334567899999999999999999999999999999999999999998878899999999999999999974

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-24  Score=185.46  Aligned_cols=146  Identities=27%  Similarity=0.406  Sum_probs=126.5

Q ss_pred             CCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCC
Q 016432           22 NPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        22 ~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      +|+++...+.+||||+|+|+|+++|++||+++|||+++.+...+.+.+......++.++..++|.++..+..        
T Consensus         1 ~~~p~~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------   72 (149)
T d1sqia1           1 GPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWN--------   72 (149)
T ss_dssp             CCCCSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTC--------
T ss_pred             CCCCCCCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCC--------
Confidence            478888899999999999999999999999999999998877666666677788899999999988754432        


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC---ceEEEEEEecCCeEEEEeec
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~---~~~~~~v~~~gg~~~~fve~  178 (389)
                                ....+++..|+.|++||||+|+|+++++++|+++|++++.+|+...+   .++++.|++|||+.|+|||+
T Consensus        73 ----------~~~~~~~~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier  142 (149)
T d1sqia1          73 ----------KEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEK  142 (149)
T ss_dssp             ----------HHHHHHHHHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             ----------chhhhhhhhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEe
Confidence                      47788899999999999999999999999999999999999976433   46788999999999999996


Q ss_pred             CCCCCCCCC
Q 016432          179 KDKANHLDF  187 (389)
Q Consensus       179 ~~~~~~g~~  187 (389)
                        .+|.|.|
T Consensus       143 --~~~~g~f  149 (149)
T d1sqia1         143 --INYTGRF  149 (149)
T ss_dssp             --ESCCSSS
T ss_pred             --CCCcCCC
Confidence              5666654

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.90  E-value=4.1e-24  Score=183.76  Aligned_cols=143  Identities=20%  Similarity=0.297  Sum_probs=120.9

Q ss_pred             cCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccC
Q 016432           21 QNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        21 ~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      .||+    ++.+|+||+|+|+|++++.+||. .|||++++++.      ++.+.++++|+++++++.+  ++        
T Consensus         2 ~np~----g~~Gidhv~fav~d~~~~~~~~~-~lGF~~~~~~~------~~~~~l~~~G~i~ll~~~~--~~--------   60 (150)
T d1cjxa1           2 ENPM----GLMGFEFIEFASPTPGTLEPIFE-IMGFTKVATHR------SKNVHLYRQGEINLILNNE--PN--------   60 (150)
T ss_dssp             CCTT----CEEEEEEEEEECSSTTSSHHHHH-HTTCEEEEEES------SSSEEEEEETTEEEEEECC--SS--------
T ss_pred             CCCC----ccCCEEEEEEecCCHHHHHHHHH-HhCCEEEeccc------ceEEEEEecCcEEEEecCC--CC--------
Confidence            3666    79999999999999999999997 59999999874      2357889999999999864  22        


Q ss_pred             CCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeecCC
Q 016432          101 NSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSYKD  180 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~~~  180 (389)
                                 +.+.+|+.+||+|++||||+|+|+++++++|+++|++++.+|.. .++..+++|+++||++|+||++..
T Consensus        61 -----------s~~~~~~~~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          61 -----------SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             -----------SHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             -----------CHhHhHHhhCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCC-CCceeeeEEEcCCCCEEEEECcCC
Confidence                       37789999999999999999999999999999999999988865 467889999999999999999632


Q ss_pred             CCCCCCCCCCCccCCCC
Q 016432          181 KANHLDFLPGFEPTDEI  197 (389)
Q Consensus       181 ~~~~g~~lp~f~~~~~~  197 (389)
                      . ....|.++|.+++..
T Consensus       129 ~-~~~~~~~dF~~~~~~  144 (150)
T d1cjxa1         129 E-GSSIYDIDFVYLEGV  144 (150)
T ss_dssp             S-SCCHHHHHEEECTTC
T ss_pred             C-CCceeccCceECCCC
Confidence            2 123578888877543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.6e-20  Score=156.04  Aligned_cols=141  Identities=18%  Similarity=0.221  Sum_probs=110.2

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYL  283 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl  283 (389)
                      ..+.++|||+++|.|+++|++||+++|||++......+.   ...+..+..+..  +...+.|.++..  ...+.+..++
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~l~~~~~--~~~~~~~~~~   79 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLET---GSREVVSHVIKQ--GKIVFVLCSALN--PWNKEMGDHL   79 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGG---TCCSEEEEEEEE--TTEEEEEEEESS--TTCHHHHHHH
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccC---CceEEEEEEecC--CcEEEEEEeccC--CCCchhhhhh
Confidence            368999999999999999999999999999987765322   122334444444  456667766542  4556888888


Q ss_pred             hhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          284 EHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       284 ~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      ..+ +.|++||||+|+||++++++|+++    |++++.+| ..+                            .|..|.+.
T Consensus        80 ~~~-g~G~~hiaf~V~di~~~~~~l~~~----G~~~~~~P-~~~----------------------------~d~~G~v~  125 (149)
T d1sqia1          80 VKH-GDGVKDIAFEVEDCEHIVQKARER----GAKIVREP-WVE----------------------------EDKFGKVK  125 (149)
T ss_dssp             HHH-CSEEEEEEEEEECHHHHHHHHHHH----TCCEEEEE-EEE----------------------------EETTEEEE
T ss_pred             hhC-CCeEEEEEEEeccHHHHHHHHHHC----CCEEccCC-eEE----------------------------ECCCCeEE
Confidence            874 789999999999999999999999    99999988 332                            24567777


Q ss_pred             EEeccccCCCCceEEEEEEecCCCC
Q 016432          364 QIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       364 qift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      ..|-++..+   ..+|||||+|+.|
T Consensus       126 ~a~i~~~g~---~~~~lier~~~~g  147 (149)
T d1sqia1         126 FAVLQTYGD---TTHTLVEKINYTG  147 (149)
T ss_dssp             EEEEECSTT---CEEEEEEEESCCS
T ss_pred             EEEEECCCC---CEEEEEEeCCCcC
Confidence            778788544   8999999999987

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=2e-17  Score=143.20  Aligned_cols=110  Identities=13%  Similarity=0.099  Sum_probs=82.1

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEec---------------
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMN---------------  267 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~---------------  267 (389)
                      ...++++|||+++|+|++++++||+++|||++..+...+..   .....+..+..  +.+.+.++               
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~---~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~   81 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTG---NMVHASYLLTS--GDLRFLFTAPYSPSLSAGEIKPT   81 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGT---CSSEEEEEEEE--TTEEEEEEEECCGGGTTTCCGGG
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCC---CeeEEEEEeeC--CCeeEEEeccccccccccccccc
Confidence            45799999999999999999999999999999877654321   11222222322  22222221               


Q ss_pred             --cCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          268 --EPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       268 --e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                        .+.+ ....+++..|++.+ +.|++||||+|+||++++++|+++    |++++.+|
T Consensus        82 ~~~~~~-~~~~~~~~~~~~~~-~~G~~Hiaf~VdDi~aa~~~l~~~----G~~~~~~P  133 (167)
T d1sqda1          82 TTASIP-SFDHGSCRSFFSSH-GLGVRAVAIEVEDAESAFSISVAN----GAIPSSPP  133 (167)
T ss_dssp             CCCSST-TCCHHHHHHHHHHH-CSEEEEEEEEESCHHHHHHHHHHT----TCCEEEEE
T ss_pred             cccccc-cCCcchHHHhhhcc-CCCceEEEEEeCCHHHHHHHHHHC----CCEEecCC
Confidence              1111 15567889999874 789999999999999999999999    99999988

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.73  E-value=9.2e-18  Score=144.84  Aligned_cols=143  Identities=17%  Similarity=0.195  Sum_probs=105.2

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCC-CCchHHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTK-RKSQIQTY  282 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~-~~s~i~~f  282 (389)
                      ..+.+||||+++|.|++++++||+++|||++......+.   ...+..+.++.+  +.+.|.|.++..... ....+..+
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~---~~~~~~~~~l~~--~~~~i~l~~~~~~~~~~~~~~~~~   77 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPEN---GSRETASYVLTN--GSARFVLTSVIKPATPWGHFLADH   77 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGG---TCCSEEEEEEEE--TTEEEEEEEESSCCSHHHHHHHHH
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccc---cceeEEEEEEec--CCEEEEEeccCCCCCccccccchh
Confidence            368999999999999999999999999999987665432   223445566665  566777777652101 11234555


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      +.. +|.|++||||+|+||++++++|+++    |++++..| ..+                            .|..|.+
T Consensus        78 ~~~-~g~G~~hiaf~VdDid~a~~~l~~~----Ga~~~~~P-~~~----------------------------~d~~G~v  123 (163)
T d1t47a1          78 VAE-HGDGVVDLAIEVPDARAAHAYAIEH----GARSVAEP-YEL----------------------------KDEHGTV  123 (163)
T ss_dssp             HHH-HCSEEEEEEEECSCHHHHHHHHHHT----TCCEEEEE-EEE----------------------------EETTEEE
T ss_pred             hhc-CCCceEEEEEeeCCHHHHHHHHHHC----CCeEEecC-cce----------------------------eCCCCEE
Confidence            655 4789999999999999999999999    99999988 331                            2345666


Q ss_pred             EEEeccccCCCCceEEEEEEecCCCC
Q 016432          363 LQIFTKPVGDRYVHLLMLVTTFSFSS  388 (389)
Q Consensus       363 lqift~~~~~~~~~FfE~iqR~~~~~  388 (389)
                      ...|-+.. +.  .-++||||.++.|
T Consensus       124 ~~a~I~~~-g~--~~~~lier~~~~g  146 (163)
T d1t47a1         124 VLAAIATY-GK--TRHTLVDRTGYDG  146 (163)
T ss_dssp             EEEEEECS-TT--CEEEEEEEEEECS
T ss_pred             EEEEEecC-CC--ceEEEEeccCCCC
Confidence            66666664 33  7899999988765

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.64  E-value=7.6e-16  Score=134.07  Aligned_cols=111  Identities=15%  Similarity=0.103  Sum_probs=81.5

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCC----------CC
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPV----------FG  272 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~----------~~  272 (389)
                      ..++.++|||++.|.|+++++.||+++|||++.++......   .....+..+.+  +.+.+.+....          ..
T Consensus         8 ~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   82 (172)
T d1sp8a1           8 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTG---NSAHASLLLRS--GSLSFLFTAPYAHGADAATAALP   82 (172)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGT---CCSEEEEEEEE--TTEEEEEEEECCSSCCGGGCSST
T ss_pred             cCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEeccccc---ceeEEEEEecc--CCeeeEEeeccCCCchhhhcccc
Confidence            34799999999999999999999999999999887654221   11122233333  23333321111          00


Q ss_pred             CCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          273 TKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       273 ~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ....+++..++..+ |.|++||||+|+||++++++|+++    |++++..|
T Consensus        83 ~~~~~~~~~~~~~~-g~Gi~Hiaf~VdDi~aa~~~l~~~----Ga~~~~~P  128 (172)
T d1sp8a1          83 SFSAAAARRFAADH-GLAVRAVALRVADAEDAFRASVAA----GARPAFGP  128 (172)
T ss_dssp             TCCHHHHHHHHHHH-SSEEEEEEEEESCHHHHHHHHHTT----TCCEEEEE
T ss_pred             cCCcchhhhhhhhc-CCceEEEEEeeCcHHHHHHHHHHC----cCEeccCC
Confidence            14556888888885 789999999999999999999999    99999988

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.63  E-value=3.1e-15  Score=124.60  Aligned_cols=131  Identities=16%  Similarity=0.176  Sum_probs=96.1

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEE----EEEcCCEEEEEEccCCCCCccccccCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASY----LLRSGDLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~----~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ++++|+||+|.|+|+++|++||++.|||++................    ....++..+++.++..+..           
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-----------   72 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDES-----------   72 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTS-----------
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccC-----------
Confidence            4899999999999999999999999999988765433322211111    1235788999988765442           


Q ss_pred             CCCCCChHHHHHHHH-hc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCC-CeeccCceEEEEE--EecCCeEEEEeec
Q 016432          105 SLPTFDHAACRSFAA-SH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSP-PVILDNLAVIAEV--QLYGDVVLRYVSY  178 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~-~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~-P~~~~~~~~~~~v--~~~gg~~~~fve~  178 (389)
                              ....+.. .+ +.|+.||||.|+|+++++++|+++|++++.+ |....+...+.++  ++++|..++|+|+
T Consensus        73 --------~~~~~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_          73 --------TVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             --------HHHHHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             --------cccccccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEEC
Confidence                    2222222 33 3489999999999999999999999999875 4443445566666  5789999999884

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.61  E-value=1.1e-14  Score=121.24  Aligned_cols=107  Identities=23%  Similarity=0.418  Sum_probs=81.3

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEE----cCCcceEEEeccCCCCCCCCchHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLA----NNDEMVLLPMNEPVFGTKRKSQIQ  280 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~----~~~g~v~l~l~e~~~~~~~~s~i~  280 (389)
                      ++.+||||+++|+|++++++||+++|||+..+......     .+.......    ...+..++++.++.   ...+...
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~el~~~~---~~~~~~~   75 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPE-----QGVVEIMMAPAAKLTEHMTQVQVMAPL---NDESTVA   75 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT-----TTEEEEEEESSSSCCTTCCEEEEEEES---STTSHHH
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecc-----cceEEEeeeceeccccccchhhhhhhh---cccCccc
Confidence            68999999999999999999999999999887655321     332222221    23567788887775   3333444


Q ss_pred             HHHh-hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          281 TYLE-HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       281 ~fl~-~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      .+.. ..++.|++||||+|+||++++++|+++    |++++..|
T Consensus        76 ~~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~----Gv~~~~~~  115 (145)
T d1jc4a_          76 KWLAKHNGRAGLHHMAWRVDDIDAVSATLRER----GVQLLYDE  115 (145)
T ss_dssp             HHHHHTTTCCEEEEEEEECSCHHHHHHHHHHH----TCCBSCSS
T ss_pred             ccccccCCCCcceEEEEecchHHHHHHHHHHC----CCEEeCCC
Confidence            4443 445678999999999999999999999    99998765

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.56  E-value=7.5e-15  Score=123.06  Aligned_cols=131  Identities=15%  Similarity=0.218  Sum_probs=94.5

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC---------CceeEEEEEEEc--CCEEEEEEccCCCCCcccc
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST---------GNTVHASYLLRS--GDLRFVFTAPYSPSISDAA   97 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~---------g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~   97 (389)
                      .+++++||.|.|+|++++++||++ |||++..+.....         +........+..  +...+.|.+...+......
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            489999999999999999999997 9999887642211         112233444443  3456665543222110000


Q ss_pred             ccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432           98 DAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                             ..           ...+..|+.|+||.|+|+++++++|+++|++++.+|....+......+++|+|..++|+|
T Consensus        85 -------~~-----------~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e  146 (149)
T d1ss4a_          85 -------RT-----------APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  146 (149)
T ss_dssp             -------TT-----------CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             -------cc-----------cCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEE
Confidence                   00           011344899999999999999999999999999999877677788899999999999998


Q ss_pred             c
Q 016432          178 Y  178 (389)
Q Consensus       178 ~  178 (389)
                      +
T Consensus       147 ~  147 (149)
T d1ss4a_         147 E  147 (149)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.55  E-value=1.4e-14  Score=121.34  Aligned_cols=111  Identities=14%  Similarity=0.164  Sum_probs=77.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEeccccc----cc--ccCceEEEEEcCCcceEEEeccCCCCCCCCch
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVG----TS--ESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQ  278 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~----~~--~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~  278 (389)
                      .+.+|+|++++|+|++++++||++ |||+..++.......    ..  ........+..+++...+.|.+....   .+.
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~---~~~   81 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTP---PTI   81 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEES---CCC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccc---cCc
Confidence            588999999999999999999998 999988765432110    01  11234555667777666666432210   000


Q ss_pred             HHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          279 IQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       279 i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...........|++|++|.|+|+++++++|+++    |++++..|
T Consensus        82 ~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~----G~~~~~~~  122 (149)
T d1ss4a_          82 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKH----GAELVGEV  122 (149)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHT----TCEESSCC
T ss_pred             ccccccCCCCcceeEEEEeechhHHHHHHHHHC----CCeEccCC
Confidence            001111224568999999999999999999999    99999887

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.6e-14  Score=126.52  Aligned_cols=125  Identities=14%  Similarity=0.168  Sum_probs=91.2

Q ss_pred             cccccccc---CCCCCCCCcceEEEEEEEeCC--HHHHHHHHHHhcCCcEEEEec---CCCCceeEEEEEEEc--CCEEE
Q 016432           14 GFKNFVRQ---NPKSDRFRVNRFHHVEFWCTD--ATNTARRFSWGLGMPIVAKSD---LSTGNTVHASYLLRS--GDLRF   83 (389)
Q Consensus        14 ~~~~~~~~---~~~~~~~~i~~l~HI~~~V~D--~~~a~~fy~~~lGF~~~~~~~---~~~g~r~~~~~~~~~--g~~~i   83 (389)
                      ||++....   +|..+..++.+||||.++|++  +++|+.||.++|||+..+..+   ..+....+.+.++++  |.+.+
T Consensus         3 Gf~~~~~~~~~~~~~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~   82 (210)
T d1sqia2           3 GFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKM   82 (210)
T ss_dssp             TCBSCSSCCTTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEE
T ss_pred             CcccCCccCcccccCCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccc
Confidence            67765322   334456689999999999998  999999999999999876432   111111223445554  56889


Q ss_pred             EEEccCCCCCccccccCCCCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCcccCCCee
Q 016432           84 VFTAPYSPSISDAADAGNSSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI  155 (389)
Q Consensus        84 ~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~  155 (389)
                      .|++|.....                 .+.+.+|++.| |.|+.||||+|+|+.+++++|+++|++++..|..
T Consensus        83 ~lne~~~~~~-----------------~sqi~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~~  138 (210)
T d1sqia2          83 PINEPAPGRK-----------------KSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSS  138 (210)
T ss_dssp             EEEECC----------------------CHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCHH
T ss_pred             cccccCCCCc-----------------ccHHHHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCcc
Confidence            9998743210                 13789999877 7899999999999999999999999999988864

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.46  E-value=1.9e-13  Score=110.49  Aligned_cols=113  Identities=16%  Similarity=0.141  Sum_probs=91.2

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      |+|+||.|+|+|+++|++||.+.||+++....+   +     ...+..|+..|.|.+......                 
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~---~-----~~~~~~g~~~l~l~~~~~~~~-----------------   55 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND---G-----FAQFTIGSHCLMLSQNHLVPL-----------------   55 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---T-----EEEEEETTEEEEEESSCSSSC-----------------
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC---C-----eEEEEEcCceeeeeecccCCC-----------------
Confidence            579999999999999999999999999876543   1     345777999988876432110                 


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                              ..++.| .+++|.|+|+++++++++++|++++.+|+..+++.+...+++|+|..++|.+
T Consensus        56 --------~~~~~~-~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~  113 (115)
T d2i7ra1          56 --------ENFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  113 (115)
T ss_dssp             --------CCCCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             --------CCCCcc-eEEEEEECCHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEE
Confidence                    012334 4799999999999999999999999999887766778889999999999876

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.46  E-value=4e-13  Score=121.57  Aligned_cols=107  Identities=18%  Similarity=0.215  Sum_probs=81.1

Q ss_pred             CCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCC---CCceeEEEEEEE--cCCEEEEEEccCCCCCccccccC
Q 016432           26 DRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLS---TGNTVHASYLLR--SGDLRFVFTAPYSPSISDAADAG  100 (389)
Q Consensus        26 ~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~---~g~r~~~~~~~~--~g~~~i~l~~p~~~~~~~~~~~~  100 (389)
                      ...++.+|+||+++|+|+++|++||++.|||+..++...+   +......+.++.  .|.+.+.++++..+... .    
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~-~----   77 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR-R----   77 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSS-C----
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCC-c----
Confidence            4567999999999999999999999999999988754221   111112333444  46788999987654321 1    


Q ss_pred             CCCCCCCCCChHHHHHHHHhcC-CceeEEEEEEcCHHHHHHHHHHCCCc
Q 016432          101 NSSASLPTFDHAACRSFAASHG-LAARSIAVEVEDADVAFNTSVAHGAK  148 (389)
Q Consensus       101 ~~~~~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~Dvda~~~~a~a~Ga~  148 (389)
                                 +.+.+|++.|+ .|++||||+|+|++++++.|+++|+.
T Consensus        78 -----------s~i~~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          78 -----------SQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             -----------CHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             -----------cHHHHHHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                       48899998886 69999999999999999999988644

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.44  E-value=2.7e-13  Score=120.99  Aligned_cols=108  Identities=12%  Similarity=0.080  Sum_probs=84.3

Q ss_pred             CcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEc--CCEEEEEEccCCCCCccccccCCCCC
Q 016432           29 RVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        29 ~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ++.+||||+++|+  |+++|+.||+++|||++....+.++......+..+..  +.+.+.++.+.....           
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~-----------   70 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGA-----------   70 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCC-----------
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCc-----------
Confidence            5789999999998  8999999999999999988765433322334444444  457777776543221           


Q ss_pred             CCCCCChHHHHHHHHhcC-CceeEEEEEEcCHHHHHHHHHHCCCcccCCCe
Q 016432          105 SLPTFDHAACRSFAASHG-LAARSIAVEVEDADVAFNTSVAHGAKPSSPPV  154 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~  154 (389)
                             +.+.+|+..++ .|+.||||+|+|+.+++++|+++|++++..|.
T Consensus        71 -------sqi~~fl~~~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~pp  114 (203)
T d1cjxa2          71 -------GQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  114 (203)
T ss_dssp             -------SHHHHHHHHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             -------cHHHHHHHhcCCCCCceEEEEeCCHHHHHHHHHhcCCccccCch
Confidence                   37889998874 69999999999999999999999999988653

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.42  E-value=5.4e-13  Score=121.06  Aligned_cols=119  Identities=11%  Similarity=0.094  Sum_probs=86.4

Q ss_pred             ccccccccCCCCCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCC---CceeEEEEEEE--cCCEEEEEEcc
Q 016432           14 GFKNFVRQNPKSDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLST---GNTVHASYLLR--SGDLRFVFTAP   88 (389)
Q Consensus        14 ~~~~~~~~~~~~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~---g~r~~~~~~~~--~g~~~i~l~~p   88 (389)
                      ||.........+...++.+||||.++|+|+++|++||...|||........++   ......+.++.  .|.+.+.+++|
T Consensus         4 Gf~~~~~~~~~~~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~   83 (230)
T d1sqda2           4 GFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP   83 (230)
T ss_dssp             TCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEE
T ss_pred             CCEeCCccccCCCCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEee
Confidence            55554433444445679999999999999999999999999999887653221   11112334444  36789999988


Q ss_pred             CCCCCccccccCCCCCCCCCCChHHHHHHHHhc-CCceeEEEEEEcCHHHHHHHHHHCCCc
Q 016432           89 YSPSISDAADAGNSSASLPTFDHAACRSFAASH-GLAARSIAVEVEDADVAFNTSVAHGAK  148 (389)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h-g~gv~~iaf~V~Dvda~~~~a~a~Ga~  148 (389)
                      ..+.+.                .+.+.+|++.| |.|++||||+|+|+.+++++|+++|+.
T Consensus        84 ~~~~~~----------------~sqi~~FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          84 VHGTKR----------------KSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             CCC-------------------CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             cCCCCC----------------cchHHHHHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence            654321                03789999876 789999999999999999999997554

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.40  E-value=5.5e-13  Score=113.38  Aligned_cols=99  Identities=14%  Similarity=0.145  Sum_probs=81.6

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      +.++.+||||.++|+|++++.+||++ |||+...+...         ..+.+++.  |.+.+.++.+     ..|.+.+|
T Consensus         4 p~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~---------~~~~l~~~--G~i~ll~~~~-----~~s~~~~~   66 (150)
T d1cjxa1           4 PMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS---------KNVHLYRQ--GEINLILNNE-----PNSIASYF   66 (150)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS---------SSEEEEEE--TTEEEEEECC-----SSSHHHHH
T ss_pred             CCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc---------eEEEEEec--CcEEEEecCC-----CCCHhHhH
Confidence            45799999999999999999999986 99998765432         12333443  5677777654     35788999


Q ss_pred             HhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          283 LEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ++. +|+|++||||+|+|+.+++++++++    |++++..|
T Consensus        67 ~~~-hg~gv~hiaf~V~D~~~a~~~a~~~----Ga~~i~~~  102 (150)
T d1cjxa1          67 AAE-HGPSVCGMAFRVKDSQKAYNRALEL----GAQPIHID  102 (150)
T ss_dssp             HHH-HSSEEEEEEEEESCHHHHHHHHHHT----TCCBCCCC
T ss_pred             Hhh-CCCceEEEEEEeCCHHHHHHHHHHC----CCEEcccC
Confidence            998 4799999999999999999999999    99999887

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.33  E-value=2.4e-12  Score=114.24  Aligned_cols=111  Identities=12%  Similarity=0.064  Sum_probs=85.5

Q ss_pred             CcceEEEEEEEeC--CHHHHHHHHHHhcCCcEEEEecCCC---CceeEEEEEEEc--CCEEEEEEccCCCCCccccccCC
Q 016432           29 RVNRFHHVEFWCT--DATNTARRFSWGLGMPIVAKSDLST---GNTVHASYLLRS--GDLRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        29 ~i~~l~HI~~~V~--D~~~a~~fy~~~lGF~~~~~~~~~~---g~r~~~~~~~~~--g~~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      .+++||||+++|+  ++++|+.||+++|||++......++   ....+.+..+.+  +.+.+.+++|.....        
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~--------   74 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKK--------   74 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSS--------
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCcccc--------
Confidence            4789999999999  9999999999999999876432111   111234445554  457888887643210        


Q ss_pred             CCCCCCCCChHHHHHHHHhcC-CceeEEEEEEcCHHHHHHHHHHCCCcccCCCeec
Q 016432          102 SSASLPTFDHAACRSFAASHG-LAARSIAVEVEDADVAFNTSVAHGAKPSSPPVIL  156 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~  156 (389)
                               .+.+.+|+..++ .|++||||+|+|+.+++++|+++|++++..|...
T Consensus        75 ---------~s~i~~FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~Y  121 (199)
T d1t47a2          75 ---------KSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY  121 (199)
T ss_dssp             ---------CCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG
T ss_pred             ---------ccchhhhhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHH
Confidence                     138899999997 5999999999999999999999999999888654

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.32  E-value=6.8e-12  Score=102.55  Aligned_cols=118  Identities=13%  Similarity=0.062  Sum_probs=84.8

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      +.+|+||.|.|+|++++++||++.|||++....+...... .....+..++..+.+.....+                  
T Consensus         2 i~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------------   62 (130)
T d1r9ca_           2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSL-SREKFFLIGDIWVAIMQGEKL------------------   62 (130)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCC-SCEEEEEETTEEEEEEECCCC------------------
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccc-eeEEEEecCCEEEeecccccc------------------
Confidence            6899999999999999999999999999988754222111 123345567777776653211                  


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEc--CHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVE--DADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~--Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                 ...+..|+||.|+  |+++++++++++|+++..+|....+......+++|+|..++|..
T Consensus        63 -----------~~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~  121 (130)
T d1r9ca_          63 -----------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHT  121 (130)
T ss_dssp             -----------SSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEEC
T ss_pred             -----------cccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEE
Confidence                       1225678999775  89999999999999987776543344456778899999998865

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.30  E-value=7.8e-12  Score=103.15  Aligned_cols=116  Identities=11%  Similarity=0.130  Sum_probs=83.3

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      |++|+||+++|+|++++.+||+++|||++.+...         +  ...++..+....+.+.+..               
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~---------~--~~~l~~~~~~~~l~l~~~~---------------   55 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---------N--GDLFRIDSRAWRIAVQQGE---------------   55 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---------T--EEEEESSSBSCSEEEEECT---------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC---------c--ceEEeecCCceEEEEecCC---------------
Confidence            7899999999999999999999999999876421         1  2334554444555554332               


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                        .+++.|++|.|.   |++++.++|+++    |+++...| ...-                ..-.....++=+|.+|..
T Consensus        56 --~~~~~h~~f~v~~~~dl~~~~~~l~~~----g~~~~~~~-~~~~----------------~~~~~~~~~~f~DPdGn~  112 (131)
T d1lgta1          56 --VDDLAFAGYEVADAAGLAQMADKLKQA----GIAVTTGD-ASLA----------------RRRGVTGLITFADPFGLP  112 (131)
T ss_dssp             --TCEEEEEEEEESSHHHHHHHHHHHHHT----TCCCEECC-HHHH----------------HHHTCSEEEEEECTTSCE
T ss_pred             --CCCceEEEEEEccHHHHHHHHHHHHHc----CCceEECC-cccc----------------ccCCceEEEEEECCCCCE
Confidence              357999999995   578899999999    99999887 3211                000111345667888999


Q ss_pred             EEEecccc
Q 016432          363 LQIFTKPV  370 (389)
Q Consensus       363 lqift~~~  370 (389)
                      +++|.-|-
T Consensus       113 iE~~~~~~  120 (131)
T d1lgta1         113 LEIYYGAS  120 (131)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeCCC
Confidence            99997653

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=1.1e-11  Score=100.68  Aligned_cols=121  Identities=17%  Similarity=0.145  Sum_probs=85.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC-C---EEEEEEccCCCCCccccccCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG-D---LRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g-~---~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      |+++||.|.|+|++++++||++.|||++........+.. . ......+ .   ..........+..             
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------   65 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKY-S-LAFVGYGPETEEAVIELTYNWGVDK-------------   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTE-E-EEEEESSCTTTSCEEEEEEETTCCC-------------
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccce-e-eeeeccceeeecccccccccccccc-------------
Confidence            579999999999999999999999999887654333322 1 1121211 1   1111111111100             


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccC-ceEEEEEEecCCeEEEEeec
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN-LAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~-~~~~~~v~~~gg~~~~fve~  178 (389)
                                  ...+.+..++++.+++++++.+++++.|..+..+|..... ...+..+++|+|..++|++.
T Consensus        66 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~  126 (135)
T d1f9za_          66 ------------YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  126 (135)
T ss_dssp             ------------CCCCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC
T ss_pred             ------------ccccccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEEC
Confidence                        0123478899999999999999999999999888765443 46678899999999999995

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.29  E-value=1.7e-11  Score=97.46  Aligned_cols=108  Identities=9%  Similarity=0.043  Sum_probs=78.9

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      ++|+||.|.|+|++++++||++.|||++..+.+   + .  .......++..+.+.....+.                  
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~-~--~~~~~~~~~~~~~~~~~~~~~------------------   57 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N-A--FAVMRDNDGFILTLMKGKEVQ------------------   57 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T-T--EEEEECTTCCEEEEEECSSCC------------------
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C-c--ceeeeecceeeeeeeeeeccc------------------
Confidence            689999999999999999999999999987653   1 1  122333445667766532211                  


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          111 HAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                                 ..+..|++|.|+|   +++++++++++|+++..+|...   .....+++|+|..+++.
T Consensus        58 -----------~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~---~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          58 -----------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAH---AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -----------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC----CEEEEEEETTTEEEEEE
T ss_pred             -----------ccccceeeeeeccccchhhhhhhHHHcCCccccCCCCc---eEEEEEECCCCCEEEEE
Confidence                       2256789999987   7789999999999976655532   23456889999988763

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.28  E-value=2.2e-11  Score=99.44  Aligned_cols=125  Identities=16%  Similarity=0.144  Sum_probs=84.0

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+|+++.|.|++++++||+++|||+..+.......    .......+..  +...+.+.....             
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~-------------   61 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQF----SLSREKFFLI--GDIWVAIMQGEK-------------   61 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTT----CCSCEEEEEE--TTEEEEEEECCC-------------
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccc----cceeEEEEec--CCEEEeeccccc-------------
Confidence            467899999999999999999999999999876443211    1112222332  234444433321             


Q ss_pred             hcCCCCcceEEEEeC--CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVSE--DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~vd--DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       ....+..|+||.++  |+++++++|+++    |+++...| ....      -+             ....|=.|++|++
T Consensus        62 -~~~~~~~~~~f~v~~~dv~~~~~~l~~~----gv~i~~~~-~~~~------~~-------------~~~~~~~DPdGn~  116 (130)
T d1r9ca_          62 -LAERSYNHIAFKIDDADFDRYAERVGKL----GLDMRPPR-PRVE------GE-------------GRSIYFYDDDNHM  116 (130)
T ss_dssp             -CSSCCSCEEEEECCGGGHHHHHHHHHHH----TCCBCCCC-C------------------------CCEEEEECTTSCE
T ss_pred             -ccccceeeeeecccHHHHHHHHHHHHHC----CCeEecCC-cccC------CC-------------EEEEEEECCCCCE
Confidence             12346899999774  799999999999    99988766 2211      00             0123456788999


Q ss_pred             EEEeccccCCC
Q 016432          363 LQIFTKPVGDR  373 (389)
Q Consensus       363 lqift~~~~~~  373 (389)
                      +++||..+.+|
T Consensus       117 iEl~~~~~~~r  127 (130)
T d1r9ca_         117 FELHTGTLTER  127 (130)
T ss_dssp             EEEECCCHHHH
T ss_pred             EEEEECCHHHh
Confidence            99999886543

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.27  E-value=9.2e-11  Score=97.44  Aligned_cols=123  Identities=11%  Similarity=0.025  Sum_probs=85.8

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC----CEEEEEEccCCCCCccccccCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG----DLRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g----~~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.|.+|+||.|.|+|++++++||++.|||+++.+....++. ......+..+    ...+.+........          
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------   70 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDP-SMYHLFYGDKTGSPGTELSFFEIPLVGR----------   70 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEE-EEEEEEEESTTCCTTSEEEEEECTTCCB----------
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCC-ceeEEEecccccceeeEEeecccccccC----------
Confidence            46899999999999999999999999999998765322222 2223333332    23444443211110          


Q ss_pred             CCCCCCChHHHHHHHHhcC-CceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASHG-LAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                     ...+ .++.|+||+|+|   ++++.+++.+.|+.+ .+|... +......+++|+|..++|++.
T Consensus        71 ---------------~~~~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~-~~~~~~-~~~~~~yf~DPdG~~iEl~~~  132 (144)
T d1zswa1          71 ---------------TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKH-SEMTTY-ANRPALQFEDAEGLRLVLLVS  132 (144)
T ss_dssp             ---------------CBCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEE-CCSEEE-TTEEEEEEECTTCCEEEEEEC
T ss_pred             ---------------CccCCCceeEEEEecCCchhHHHHhhhhhccceee-eCcccc-CCeEEEEEECCCCCEEEEEEe
Confidence                           0122 268999999998   778889999999975 555543 456677889999999999984

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.27  E-value=1.4e-11  Score=101.80  Aligned_cols=117  Identities=16%  Similarity=0.215  Sum_probs=84.3

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      +++|+||+++|.|++++.+||+++|||++.....         +  ..++...+....+.+...                
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~---------~--~~~l~~~~~~~~l~~~~~----------------   54 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---------D--AALYRADQRAWRIAVQPG----------------   54 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---------T--EEEEESSSBSCSEEEEEC----------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc---------c--eeeeeeeecceeeeeecc----------------
Confidence            6899999999999999999999999999875432         1  233444444444444332                


Q ss_pred             cCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          286 NEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       286 ~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       ...+++|++|.|+   |++++.++|+++    |+++...| ...-.   .|-.             .+.+|=.|.+|+.
T Consensus        55 -~~~~~~h~~f~v~~~~dl~~~~~~l~~~----g~~~~~~~-~~~~~---~~~~-------------~~~~~~~DPdGn~  112 (132)
T d1kw3b1          55 -ELDDLAYAGLEVDDAAALERMADKLRQA----GVAFTRGD-EALMQ---QRKV-------------MGLLCLQDPFGLP  112 (132)
T ss_dssp             -TTCEEEEEEEECSSHHHHHHHHHHHHHH----TCCCEECC-HHHHH---HHTC-------------SEEEEEECTTSCE
T ss_pred             -CCCCceEEEEEeccHHHHHHHHHHHHHc----CCCceecC-ccccc---cCCc-------------ceEEEEECCCCCE
Confidence             2357999999995   578899999999    99999887 43221   1111             1234667889999


Q ss_pred             EEEeccccC
Q 016432          363 LQIFTKPVG  371 (389)
Q Consensus       363 lqift~~~~  371 (389)
                      +.+|..|..
T Consensus       113 iE~~~~~~~  121 (132)
T d1kw3b1         113 LEIYYGPAE  121 (132)
T ss_dssp             EEEEECCCB
T ss_pred             EEEEECCCc
Confidence            999987753

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.25  E-value=1.7e-11  Score=96.83  Aligned_cols=110  Identities=12%  Similarity=0.027  Sum_probs=79.5

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      .++ +..|.|+|++++++||++.|||++....+.        ...+..++....+.......                  
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~------------------   54 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW--------IVTHASPLEAHAQVSFAREG------------------   54 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS--------EEEEEEEEEEEEEEEEESSS------------------
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc--------eeEeccccccceeeeccccc------------------
Confidence            455 588999999999999999999999876541        12223322222222111111                  


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEe
Q 016432          111 HAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYV  176 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fv  176 (389)
                               ..+.+..+++|.|+|+|+.+++++++|++++.+|+..+.+.+...+++|+|..++++
T Consensus        55 ---------~~~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          55 ---------GSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             ---------BTTBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             ---------CCCCceeEEEEEecCHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence                     012244579999999999999999999999999988766777888999999988775

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.24  E-value=6.9e-11  Score=100.88  Aligned_cols=117  Identities=12%  Similarity=0.055  Sum_probs=83.2

Q ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCE-E-EEEEccCCCCCccccccCCCCCC
Q 016432           28 FRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDL-R-FVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        28 ~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~-~-i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      |..++++||.|+|+|++++++||++.|||++..+.....+..  .......+.. . ..+...  +              
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~--------------   62 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--VAQFLSLSTKAHDVAFIHH--P--------------   62 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCE--EEEEEESSSBSCSEEEEEC--S--------------
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccc--eeeeeeccccccccccccc--C--------------
Confidence            356889999999999999999999999999886644333321  2223333321 1 111110  0              


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEcCHH---HHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVEDAD---VAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvd---a~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                     ...++.|++|.+.+.+   +++++|+++|+++..+|.... +......+++|+|..++|+.
T Consensus        63 ---------------~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~  123 (162)
T d1mpya2          63 ---------------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFC  123 (162)
T ss_dssp             ---------------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEE
T ss_pred             ---------------CCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEE
Confidence                           1237899999998655   788999999998877775432 34568889999999999987

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=7.9e-12  Score=107.79  Aligned_cols=128  Identities=16%  Similarity=0.109  Sum_probs=85.2

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC---------------------EEEEEEcc
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD---------------------LRFVFTAP   88 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~---------------------~~i~l~~p   88 (389)
                      ..+|+||.|.|+|++++++||++.|||++........+...  ......+.                     ..+.+..+
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFS--LYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEE--EEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceE--EEEeecCCccccccccccccccccccccceeEEEeec
Confidence            35799999999999999999999999998876544333221  22222111                     11222211


Q ss_pred             CCCCCccccccCCCCCCCCCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEec
Q 016432           89 YSPSISDAADAGNSSASLPTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLY  168 (389)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~  168 (389)
                      .....          ..  .+.  ..    .....|+.|+||.|+|+++++++|+++|+++..+|.... ...+.++++|
T Consensus        99 ~~~~~----------~~--~~~--~~----~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~-~~~~~f~~DP  159 (176)
T d1qipa_          99 TEDDE----------TQ--SYH--NG----NSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK-MKGLAFIQDP  159 (176)
T ss_dssp             GGGCT----------TC--CCB--CS----SSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS-STTCEEEECT
T ss_pred             ccccc----------Cc--Ccc--CC----CCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC-ceEEEEEECC
Confidence            10000          00  000  00    001238999999999999999999999999998886532 3346788999


Q ss_pred             CCeEEEEeec
Q 016432          169 GDVVLRYVSY  178 (389)
Q Consensus       169 gg~~~~fve~  178 (389)
                      +|..++|+++
T Consensus       160 dG~~IElvq~  169 (176)
T d1qipa_         160 DGYWIEILNP  169 (176)
T ss_dssp             TCCEEEEECT
T ss_pred             CCCEEEEEeC
Confidence            9999999994

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.23  E-value=3e-11  Score=99.56  Aligned_cols=108  Identities=12%  Similarity=0.040  Sum_probs=82.3

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+|+||.|.|+|++++++||+++|||++..+.+   +     ...++.++  ..+.+...                   
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~-----~~~l~~~~~~~~l~l~~~-------------------   54 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---N-----GDLFRIDSRAWRIAVQQG-------------------   54 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T-----EEEEESSSBSCSEEEEEC-------------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC---c-----ceEEeecCCceEEEEecC-------------------
Confidence            7899999999999999999999999999887643   1     23355554  33554431                   


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeec---cCceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVIL---DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~---~~~~~~~~v~~~gg~~~~fve  177 (389)
                                   ..+++.|++|.|.   |++++.++++++|+++...|...   .+......+++|+|..++++.
T Consensus        55 -------------~~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          55 -------------EVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             -------------TTCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             -------------CCCCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence                         1237889999995   57889999999999998776432   233457788999999999875

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.18  E-value=1.2e-10  Score=100.30  Aligned_cols=117  Identities=13%  Similarity=0.103  Sum_probs=82.2

Q ss_pred             CCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCC
Q 016432           27 RFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSA  104 (389)
Q Consensus        27 ~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~  104 (389)
                      ...|++|+||.|.|+|++++++||++.|||+++.+.+    .  ........++  ..+.+..+..+..           
T Consensus         7 ~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------   69 (170)
T d1zswa2           7 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q--EAIFQSIKGEAFGEIVVKYLDGPTE-----------   69 (170)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEESSTTCSTTCEEEEECCSSBC-----------
T ss_pred             hHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----c--eEEEEeccCccceEEEecccccccc-----------
Confidence            3368999999999999999999999999999987643    1  1122222222  2233333322210           


Q ss_pred             CCCCCChHHHHHHHHhcC-CceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          105 SLPTFDHAACRSFAASHG-LAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       105 ~~~~~~~~~~~~~l~~hg-~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     ..+ .+++||||.|+|   ++++.+++.++|+++ .++... +......+++|+|..++++.
T Consensus        70 ---------------~~~~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~-~~~~~~-~~~~s~Yf~DPdG~~iEl~t  129 (170)
T d1zswa2          70 ---------------KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHS-SGIIDR-FYFKSLYFRESNGILFEIAT  129 (170)
T ss_dssp             ---------------BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCC-CCCEEC-SSEEEEEEECTTCCEEEEEE
T ss_pred             ---------------ccCccccceEEEEeCChHHHHHHHHHHHhcCCCc-cccccC-CCEEEEEEECCCCcEEEEEE
Confidence                           012 278999999976   889999999999985 555543 34556688999999999976

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.17  E-value=1.1e-10  Score=92.51  Aligned_cols=108  Identities=11%  Similarity=0.184  Sum_probs=76.3

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhc
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHN  286 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~  286 (389)
                      .+|+||++.|+|++++.+||+++|||++.+...         + ...++. +++...+.+.....   .           
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---------~-~~~~~~-~~~~~~~~~~~~~~---~-----------   56 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---------N-AFAVMR-DNDGFILTLMKGKE---V-----------   56 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---------T-TEEEEE-CTTCCEEEEEECSS---C-----------
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---------C-cceeee-ecceeeeeeeeeec---c-----------
Confidence            478999999999999999999999999876532         1 122333 34455666654431   0           


Q ss_pred             CCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEE
Q 016432          287 EGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLL  363 (389)
Q Consensus       287 ~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~ll  363 (389)
                      ..++.+|++|.|+|   +.++.++|+++    |+++...| ...        +             .. +|=+|++|.++
T Consensus        57 ~~~~~~h~~f~v~~~~~v~~~~~~l~~~----G~~~~~~~-~~~--------~-------------~~-~~~~DPdG~~i  109 (113)
T d1xqaa_          57 QYPKTFHVGFPQESEEQVDKINQRLKED----GFLVEPPK-HAH--------A-------------YT-FYVEAPGGFTI  109 (113)
T ss_dssp             CCCTTCCEEEECSSHHHHHHHHHHHHHT----TCCCCCCE-EC---------C-------------EE-EEEEETTTEEE
T ss_pred             cccccceeeeeeccccchhhhhhhHHHc----CCccccCC-CCc--------e-------------EE-EEEECCCCCEE
Confidence            23468999999987   67899999999    99976655 221        1             11 34467889998


Q ss_pred             EEe
Q 016432          364 QIF  366 (389)
Q Consensus       364 qif  366 (389)
                      +|+
T Consensus       110 Ei~  112 (113)
T d1xqaa_         110 EVM  112 (113)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            886

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.17  E-value=4e-11  Score=100.48  Aligned_cols=114  Identities=16%  Similarity=0.115  Sum_probs=82.5

Q ss_pred             CCCCCcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC---EEEEEEccCCCCCccccccCC
Q 016432           25 SDRFRVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD---LRFVFTAPYSPSISDAADAGN  101 (389)
Q Consensus        25 ~~~~~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~---~~i~l~~p~~~~~~~~~~~~~  101 (389)
                      .+++.|++|+||.|+|+|++++++||++.|||++....+    ..   ..+...+.   ..+.+...             
T Consensus         9 ~p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~-------------   68 (146)
T d1f1ua1           9 VPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NT---IYLRSLEEFIHHNLVLRQG-------------   68 (146)
T ss_dssp             SCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SE---EEEECTTCCSSCSEEEEEC-------------
T ss_pred             CCCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cc---eeeecccccccceeecccc-------------
Confidence            346679999999999999999999999999999987643    11   22221221   12222221             


Q ss_pred             CCCCCCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeecc-CceEEEEEEecCCeEEEEee
Q 016432          102 SSASLPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILD-NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       102 ~~~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~-~~~~~~~v~~~gg~~~~fve  177 (389)
                                         ...++.|++|.|.   |++++.++|+++|+++...|.... +......+++|+|..++|..
T Consensus        69 -------------------~~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~  129 (146)
T d1f1ua1          69 -------------------PIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFY  129 (146)
T ss_dssp             -------------------SSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             -------------------CCCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEE
Confidence                               1237889999997   689999999999999876554432 23346678999999999976

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=2.4e-10  Score=93.70  Aligned_cols=111  Identities=14%  Similarity=0.005  Sum_probs=81.0

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++.+|+||.|.|+|++++.+||++.|||++..+.+.        ...+..|+..+.......+..               
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---------------   57 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ--------GAYLELGSLWLCLSREPQYGG---------------   57 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--------EEEEEETTEEEEEEECTTCCC---------------
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc--------eeeeecCCeEEEEeeeccccc---------------
Confidence            378999999999999999999999999998876531        234556777766654332211               


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                  ...+..|++|.+  +|+++++++++++|+++...|..   ......+++|+|..++|..
T Consensus        58 ------------~~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~---~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          58 ------------PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS---EGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             ------------CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS---SSCEEEEECTTCCEEEEES
T ss_pred             ------------cccccccchhccccchHHHHHHHHHHCCCcCccCCCc---ceeEEEEECCCCCEEEEEE
Confidence                        122445566555  69999999999999998766543   2334678899999998864

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.16  E-value=1.3e-10  Score=96.03  Aligned_cols=114  Identities=13%  Similarity=0.050  Sum_probs=83.1

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      ++.+|+||.|.|+|++++++||++.|||++....+    .    ...+..++..+.+.........              
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~----~~~~~~~~~~~~l~~~~~~~~~--------------   58 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----T----GAYLTCGDLWVCLSYDEARQYV--------------   58 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----T----EEEEEETTEEEEEEECTTCCCC--------------
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----c----ccccccccccceeecccccccC--------------
Confidence            37899999999999999999999999999887653    1    2345556655555443222100              


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEE--cCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          109 FDHAACRSFAASHGLAARSIAVEV--EDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V--~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                .....+..|++|.+  +|+++++++++++|++++..|..   ......+++|+|..++|..
T Consensus        59 ----------~~~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~~---~~~~~~~~DPdGn~iEi~~  116 (140)
T d1npba_          59 ----------PPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS---EGASFYFLDPDGHKLELHV  116 (140)
T ss_dssp             ----------CGGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS---SSEEEEEECTTCCEEEEEE
T ss_pred             ----------CCcCCccceeeeechHHHHHHHHHHHHHCCCeEeecCCC---CceEEEEECCCCCEEEEEE
Confidence                      01223677888887  68999999999999998766643   3345678899999999865

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=1e-10  Score=96.02  Aligned_cols=115  Identities=17%  Similarity=0.185  Sum_probs=79.0

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+||++.|.|++++.+||+++||+++..+...           ..++......+........              
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~--------------   55 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ-----------GAYLELGSLWLCLSREPQY--------------   55 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT-----------EEEEEETTEEEEEEECTTC--------------
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc-----------eeeeecCCeEEEEeeeccc--------------
Confidence            478999999999999999999999999998765321           1222222222222222211              


Q ss_pred             hcCCCCcceEEEEe--CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                      .....+++|++|.+  +|+++++++|+++    |+++...| ..+.                      .-+|=+|.+|..
T Consensus        56 ~~~~~~~~h~~~~~~~~dl~~~~~~l~~~----G~~~~~~~-~~~~----------------------~~~~f~DPdGn~  108 (134)
T d1nkia_          56 GGPAADYTHYAFGIAAADFARFAAQLRAH----GVREWKQN-RSEG----------------------DSFYFLDPDGHR  108 (134)
T ss_dssp             CCCCSSSCEEEEEECHHHHHHHHHHHHHT----TCCEEECC-CSSS----------------------CEEEEECTTCCE
T ss_pred             cccccccccchhccccchHHHHHHHHHHC----CCcCccCC-Ccce----------------------eEEEEECCCCCE
Confidence            01344678888777  6999999999999    99988766 3211                      113556789999


Q ss_pred             EEEeccccC
Q 016432          363 LQIFTKPVG  371 (389)
Q Consensus       363 lqift~~~~  371 (389)
                      +++||-++.
T Consensus       109 iEl~~~~~~  117 (134)
T d1nkia_         109 LEAHVGDLR  117 (134)
T ss_dssp             EEEESCCHH
T ss_pred             EEEEECCch
Confidence            999997643

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.15  E-value=1.2e-10  Score=99.24  Aligned_cols=121  Identities=16%  Similarity=0.109  Sum_probs=81.0

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ...++|||+++|+|++++++||+++|||++.......+     .+.....+..........+...               
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------------   61 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDEN-----GTRVAQFLSLSTKAHDVAFIHH---------------   61 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTT-----CCEEEEEEESSSBSCSEEEEEC---------------
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEcccc-----ccceeeeeeccccccccccccc---------------
Confidence            35789999999999999999999999999877654321     1222233333222221111111               


Q ss_pred             hcCCCCcceEEEEeCCHH---HHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSEDIF---RTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~---~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                       ...+|++|+||.++++.   ++.++|+++    |+++...| ..        .+.          -....+|=+|++|+
T Consensus        62 -~~~~~~~h~~~~~~~~~~~~~~~~~L~~~----gv~~~~~p-~~--------~~~----------g~~~~~y~~DPdGn  117 (162)
T d1mpya2          62 -PEKGRLHHVSFHLETWEDLLRAADLISMT----DTSIDIGP-TR--------HGL----------THGKTIYFFDPSGN  117 (162)
T ss_dssp             -SSSSEEEEEEEECSCHHHHHHHHHHHHHH----TCCEEEEE-EE--------CSS----------TTCEEEEEECTTSC
T ss_pred             -CCCCccceeEEEEeeehhhhhHHHHHHHc----CCccccCc-cc--------cCC----------CCeEEEEEECCCCC
Confidence             12356999999998765   788999999    99988766 32        110          01124577789999


Q ss_pred             EEEEeccc
Q 016432          362 LLQIFTKP  369 (389)
Q Consensus       362 llqift~~  369 (389)
                      .+.+|+..
T Consensus       118 ~iEl~~~~  125 (162)
T d1mpya2         118 RNEVFCGG  125 (162)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEECC
Confidence            99999864

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.14  E-value=5.7e-11  Score=98.36  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=83.1

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++++|+||++.|.|++++++||+++|||++......          . ..+...+....+.+.....  ...        
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----------~-~~~~~~~~~~~l~~~~~~~--~~~--------   59 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----------G-AYLTCGDLWVCLSYDEARQ--YVP--------   59 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----------E-EEEEETTEEEEEEECTTCC--CCC--------
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----------c-cccccccccceeecccccc--cCC--------
Confidence            478999999999999999999999999998765321          1 2222233344444433321  111        


Q ss_pred             hcCCCCcceEEEEe--CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceE
Q 016432          285 HNEGAGVQHLALVS--EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTL  362 (389)
Q Consensus       285 ~~~g~GvqHiAf~v--dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~l  362 (389)
                       ....+++|+||.+  +|+++++++|+++    |++++..| ..        .+              .-+|=+|.+|.+
T Consensus        60 -~~~~~~~h~~~~~~~~d~~~~~~~l~~~----Gv~~~~~~-~~--------~~--------------~~~~~~DPdGn~  111 (140)
T d1npba_          60 -PQESDYTHYAFTVAEEDFEPLSQRLEQA----GVTIWKQN-KS--------EG--------------ASFYFLDPDGHK  111 (140)
T ss_dssp             -GGGSCSCEEEEECCHHHHHHHHHHHHHT----TCCEEECC-CS--------SS--------------EEEEEECTTCCE
T ss_pred             -CcCCccceeeeechHHHHHHHHHHHHHC----CCeEeecC-CC--------Cc--------------eEEEEECCCCCE
Confidence             1235689999998  7899999999999    99998876 21        11              123557889999


Q ss_pred             EEEeccccCC
Q 016432          363 LQIFTKPVGD  372 (389)
Q Consensus       363 lqift~~~~~  372 (389)
                      +.|+|.++.+
T Consensus       112 iEi~~~~~~~  121 (140)
T d1npba_         112 LELHVGSLAA  121 (140)
T ss_dssp             EEEEECCHHH
T ss_pred             EEEEECCchh
Confidence            9999876543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.13  E-value=1.1e-10  Score=96.11  Aligned_cols=108  Identities=12%  Similarity=0.055  Sum_probs=82.0

Q ss_pred             cceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCE--EEEEEccCCCCCccccccCCCCCCCC
Q 016432           30 VNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDL--RFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        30 i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~--~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |.+|+||.|.|+|++++.+||++.|||++..+.+    .    ...++.++-  .+++...                   
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~----~~~l~~~~~~~~l~~~~~-------------------   54 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----D----AALYRADQRAWRIAVQPG-------------------   54 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----T----EEEEESSSBSCSEEEEEC-------------------
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc----c----eeeeeeeecceeeeeecc-------------------
Confidence            7899999999999999999999999999887643    1    234555542  3444421                   


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCeecc---CceEEEEEEecCCeEEEEee
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVILD---NLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~~~---~~~~~~~v~~~gg~~~~fve  177 (389)
                                   -..++.|++|.|.   |++++.+++.++|+++...|....   .......+++|+|..++|+-
T Consensus        55 -------------~~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          55 -------------ELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             -------------TTCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             -------------CCCCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence                         0237899999995   688999999999999987665321   22356678899999999975

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.13  E-value=9.7e-11  Score=97.29  Aligned_cols=100  Identities=9%  Similarity=0.100  Sum_probs=66.5

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc--ceEEEeccCCCCCCCCchHHHH
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE--MVLLPMNEPVFGTKRKSQIQTY  282 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g--~v~l~l~e~~~~~~~~s~i~~f  282 (389)
                      .+++|+||++.|+|++++++||+++|||++..+....+    ..+..........+  ...+.+.....  ..+.     
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~-----   71 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQD----DPSMYHLFYGDKTGSPGTELSFFEIPL--VGRT-----   71 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETT----EEEEEEEEEESTTCCTTSEEEEEECTT--CCBC-----
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeecccc----CCceeEEEecccccceeeEEeeccccc--ccCC-----
Confidence            47899999999999999999999999999887654321    12233233332222  23344433321  0110     


Q ss_pred             HhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecC
Q 016432          283 LEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       283 l~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~  321 (389)
                        ..+..|++|+||.|+|   +.++.++|++.    |+.+..
T Consensus        72 --~~~~~~~~Hiaf~v~~~~~l~~~~~~l~~~----gv~~~~  107 (144)
T d1zswa1          72 --YRGTNAITRIGLLVPSEDSLHYWKERFEKF----DVKHSE  107 (144)
T ss_dssp             --BCCBSEEEEEEEEESCHHHHHHHHHHHHHT----TCEECC
T ss_pred             --ccCCCceeEEEEecCCchhHHHHhhhhhcc----ceeeeC
Confidence              1123459999999998   77789999999    998744

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.12  E-value=6.6e-11  Score=96.44  Aligned_cols=118  Identities=19%  Similarity=0.192  Sum_probs=84.6

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      .+|+||++.|+|++++++||+ .|||........+     ....+...++..+.+.....                    
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~-~Lg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--------------------   54 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYR-KMGVEIPAEADSA-----PHTEAVLDGGIRLAWDTVET--------------------   54 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHH-HTTCCCCTTGGGC-----SEEEEECGGGCEEEEEEHHH--------------------
T ss_pred             CeEeEEEEEcCCHHHHHHHHH-HhCCccccccccc-----cceeeeccceeeeeeccccc--------------------
Confidence            368999999999999999996 5999876543311     12344445666766653210                    


Q ss_pred             hHHHHHHH----HhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          111 HAACRSFA----ASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       111 ~~~~~~~l----~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                         .....    ...+.+-.+++|.|+|   +++++++|+++|++++.+|...+++.+...+++|+|..++|.+
T Consensus        55 ---~~~~~~~~~~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~  125 (128)
T d1klla_          55 ---VRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFA  125 (128)
T ss_dssp             ---HHHHCTTCCCCCSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEE
T ss_pred             ---ccccCCCCCCCccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEe
Confidence               00000    0011245689999986   7789999999999999999887677788899999999999876

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.2e-10  Score=98.47  Aligned_cols=106  Identities=13%  Similarity=0.201  Sum_probs=66.2

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc-------------------ceEEEe
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE-------------------MVLLPM  266 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g-------------------~v~l~l  266 (389)
                      --+++|+++.|.|++++++||+++|||++.+......     .+....++.....                   ...+..
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPI-----MKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTH   95 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETT-----TTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEE
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccC-----CceEEEEeecCCccccccccccccccccccccceeEEE
Confidence            3469999999999999999999999999876554321     1212222221110                   111111


Q ss_pred             ccCCCCCCCCchHHHHHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          267 NEPVFGTKRKSQIQTYLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       267 ~e~~~~~~~~s~i~~fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ..+... .......  .......|+.|+||.++|++++.++|++.    |++++..|
T Consensus        96 ~~~~~~-~~~~~~~--~~~~~~~g~~h~~~~~~d~~~~~~~l~~~----Gv~~~~~p  145 (176)
T d1qipa_          96 NWGTED-DETQSYH--NGNSDPRGFGHIGIAVPDVYSACKRFEEL----GVKFVKKP  145 (176)
T ss_dssp             ETTGGG-CTTCCCB--CSSSSSCBEEEEEEECSCHHHHHHHHHHT----TCEEEECT
T ss_pred             eecccc-ccCcCcc--CCCCCccceeEEEeeHHHHHHHHHHHHHC----CCEEeeCC
Confidence            111000 0000000  01123458999999999999999999999    99999987

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.11  E-value=1.8e-10  Score=99.31  Aligned_cols=121  Identities=16%  Similarity=0.197  Sum_probs=77.7

Q ss_pred             cccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEE-cCCcceEEEeccCCCCCCCCchHHH
Q 016432          203 DYGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLA-NNDEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       203 ~~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~-~~~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      +..+++|+||+++|+|++++++||+++|||++..+.+.          ...... .......+.+..+..   ..     
T Consensus         7 ~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~-----   68 (170)
T d1zswa2           7 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----------EAIFQSIKGEAFGEIVVKYLDG---PT-----   68 (170)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----------EEEEESSTTCSTTCEEEEECCS---SB-----
T ss_pred             hHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----------eEEEEeccCccceEEEeccccc---cc-----
Confidence            45689999999999999999999999999999865321          111111 111111122221110   00     


Q ss_pred             HHhhcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCC
Q 016432          282 YLEHNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDD  358 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~  358 (389)
                        ...+..|++||||.|+|   +++..++|+++    |++...+. ...|       .              .=+|=+|.
T Consensus        69 --~~~~~~~l~HiAf~V~~~~~l~~~~~~l~~~----G~~~~~~~-~~~~-------~--------------~s~Yf~DP  120 (170)
T d1zswa2          69 --EKPGRGSIHHLAIRVKNDAELAYWEEQVKQR----GFHSSGII-DRFY-------F--------------KSLYFRES  120 (170)
T ss_dssp             --CBCCBTCEEEEEEEESSHHHHHHHHHHHHHT----TCCCCCCE-ECSS-------E--------------EEEEEECT
T ss_pred             --cccCccccceEEEEeCChHHHHHHHHHHHhc----CCCccccc-cCCC-------E--------------EEEEEECC
Confidence              01123469999999977   77899999999    99764322 1111       0              12477888


Q ss_pred             CceEEEEeccc
Q 016432          359 QGTLLQIFTKP  369 (389)
Q Consensus       359 ~g~llqift~~  369 (389)
                      +|.++.++|-+
T Consensus       121 dG~~iEl~t~~  131 (170)
T d1zswa2         121 NGILFEIATDG  131 (170)
T ss_dssp             TCCEEEEEEEE
T ss_pred             CCcEEEEEECC
Confidence            99999999853

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.01  E-value=2.7e-10  Score=94.06  Aligned_cols=120  Identities=9%  Similarity=0.017  Sum_probs=80.6

Q ss_pred             cceEEEEEEE----eCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCC
Q 016432           30 VNRFHHVEFW----CTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSS  103 (389)
Q Consensus        30 i~~l~HI~~~----V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~  103 (389)
                      +.+|.|+.+.    |+|++++++||++.|||++..+.....+.   ....+..++  ..+.+........          
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~----------   69 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGY---DGVMFGLPHADYHLEFTQYEGGST----------   69 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTE---EEEEEESSSSSEEEEEEEETTCCC----------
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccccce---eEEEecCCCCceeeeccccccccc----------
Confidence            4556665555    57999999999999999998765433332   233444433  4555543321110          


Q ss_pred             CCCCCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          104 ASLPTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       104 ~~~~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                     ...+.+..|++|.|+|   +++++++|+++|++++.+|... .......+++|+|..|+|.+.
T Consensus        70 ---------------~~~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~f~DPDG~~Iel~~~  131 (137)
T d1twua_          70 ---------------APVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPY-WSNGGVTIEDPDGWRIVFMNS  131 (137)
T ss_dssp             ---------------CCCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHH-HHSSEEEEECTTCCEEEEESS
T ss_pred             ---------------ccccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCC-CCceEEEEECCCCCEEEEEcC
Confidence                           0012256799999876   8899999999999988766532 233456789999999999873

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.97  E-value=2.1e-09  Score=89.01  Aligned_cols=111  Identities=14%  Similarity=0.116  Sum_probs=76.0

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcC---CEEEEEEccCCCCCccccccCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSG---DLRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g---~~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +|++|+||.|.|+|++++.+||++.|||++..+...   ..   ......+   ...+.+...                 
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~-----------------   60 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GR---VYLKAWTEVDKFSLVLREA-----------------   60 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT---SC---EEEECTTCCBSCSEEEEEC-----------------
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc---Cc---cceecccccceeecccccc-----------------
Confidence            489999999999999999999999999998876431   11   1111111   112222221                 


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEE---EcCHHHHHHHHHHCCCcccCCCee-ccCceEEEEEEecCCeEEEEee
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVE---VEDADVAFNTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~---V~Dvda~~~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~~~~fve  177 (389)
                                     ...+..+++|.   ++|+++++++|+++|+++...|.. ..+..+...+++|+|..++|+.
T Consensus        61 ---------------~~~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~  121 (145)
T d1mpya1          61 ---------------DEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA  121 (145)
T ss_dssp             ---------------SSCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEES
T ss_pred             ---------------CcccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEE
Confidence                           01244455555   558999999999999997655532 2233467889999999999986

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.95  E-value=9.7e-10  Score=93.23  Aligned_cols=94  Identities=16%  Similarity=0.140  Sum_probs=62.8

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEH  285 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~  285 (389)
                      ..+|.|+++.|.|++++.+||+++|||++.........  ...+.....+.+......+.+....               
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~a~~~~~---------------   70 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMG--PETSVPAHFLHCNGRHHTIALAAFP---------------   70 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEE--TTEEEEEEEEESSSBSCSEEEECCS---------------
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccC--CCCcceeEEEeeccccceeeeccCC---------------
Confidence            46789999999999999999999999998765442211  0011222334443333333332221               


Q ss_pred             cCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecC
Q 016432          286 NEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMP  321 (389)
Q Consensus       286 ~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~  321 (389)
                       +..|++||||.|+|   +.++.++|+++    |+....
T Consensus        71 -~~~gl~Hiaf~v~~~ddv~~~~d~l~~~----G~~~~g  104 (156)
T d1kw3b2          71 -IPKRIHHFMLQANTIDDVGYAFDRLDAA----GRITSL  104 (156)
T ss_dssp             -CSSSEEEEEEEBSSHHHHHHHHHHHHHT----TCBCBC
T ss_pred             -CCCceeEEEEECCCHHHHHHHHHHHHhc----CCceec
Confidence             23579999999965   56689999999    986543

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=98.92  E-value=3.9e-09  Score=85.20  Aligned_cols=117  Identities=18%  Similarity=0.140  Sum_probs=79.0

Q ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC---EEEEEE-ccCCCCCccccccCCCCCCC
Q 016432           31 NRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD---LRFVFT-APYSPSISDAADAGNSSASL  106 (389)
Q Consensus        31 ~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~---~~i~l~-~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+|+||.|.|+|++++++||++.|||++........+..  .......+.   ...... ....+..             
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKY--TLVFLGYGPEMSSTVLELTYNYGVTS-------------   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTE--EEEEEESSCTTTSCEEEEEEETTCCC-------------
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccce--eeeeecccccccccccccccccCccc-------------
Confidence            579999999999999999999999999987653222211  112222211   111111 1111100             


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEeec
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVSY  178 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve~  178 (389)
                                  ...+.+..++++.+++++++++++.+.++++..+|.    ...+..+++|+|..++|++.
T Consensus        67 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          67 ------------YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE----SGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             ------------CCCCSSEEEEEEEESCHHHHHHHHHHTTCCEEEECS----SSSEEEEECTTSCEEEEEEH
T ss_pred             ------------ccCCCccceeeeehhhHHHHHHHHHHcCCceeeCCC----CcEEEEEECCCCCEEEEEEC
Confidence                        012336778999999999999999999987765543    34577899999999999983

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.92  E-value=2.4e-09  Score=92.57  Aligned_cols=119  Identities=19%  Similarity=0.267  Sum_probs=78.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      .+.||+||++.|+|+++++.|| ++|||++.......+     ......++........+.+...               
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~---------------   60 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSD-----GVTYAAWMHRKQTVHDTALTGG---------------   60 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTT-----CCEEEEEEESSSSSCSEEEEES---------------
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCC-----cceeeeeeccCccccceecccc---------------
Confidence            3688999999999999999999 689999987654321     1233344444443333433322               


Q ss_pred             hcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceec--CCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCC
Q 016432          285 HNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFM--PSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQ  359 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l--~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~  359 (389)
                        .++|++|+||.+.+   +.++.++|+++    |+...  ..| .        |-+.   +       ..--+|=+|.+
T Consensus        61 --~~~~~~H~~f~~~~~~~v~~~~~~l~~~----g~~~~~~~~p-~--------~h~~---g-------~~~~~Y~~DPd  115 (176)
T d1f1ua2          61 --NGPRMHHVAFATHEKHNIIQICDKMGAL----RISDRIERGP-G--------RHGV---S-------NAFYLYILDPD  115 (176)
T ss_dssp             --SBSEEEEEEEECSSHHHHHHHHHHHHHT----TCGGGEEEEE-E--------ECST---T-------CCEEEEEECTT
T ss_pred             --cCCCccceeEEeccchhHHHHHHHHHHc----CCceeeeecc-c--------ccCC---C-------CceEEEEECCC
Confidence              24679999999985   55677899998    88543  222 1        1110   0       00125678899


Q ss_pred             ceEEEEeccc
Q 016432          360 GTLLQIFTKP  369 (389)
Q Consensus       360 g~llqift~~  369 (389)
                      |+++-+|+.-
T Consensus       116 G~~iEl~~~~  125 (176)
T d1f1ua2         116 GHRIEIYTQD  125 (176)
T ss_dssp             CCEEEEEECC
T ss_pred             CCEEEEEeCC
Confidence            9999999853

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.92  E-value=3.1e-09  Score=89.99  Aligned_cols=116  Identities=14%  Similarity=0.106  Sum_probs=73.8

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCC-ceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTG-NTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSAS  105 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g-~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~  105 (389)
                      +..+|.||.|.|+|++++.+||++.|||++........+ ........++.+.  ..+.+...  +              
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~--~--------------   70 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF--P--------------   70 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--S--------------
T ss_pred             CCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccC--C--------------
Confidence            357899999999999999999999999998765321100 0111222333322  11111110  0              


Q ss_pred             CCCCChHHHHHHHHhcCCceeEEEEEEc---CHHHHHHHHHHCCCcccCCCee-ccCceEEEEEEecCCe-EEEEe
Q 016432          106 LPTFDHAACRSFAASHGLAARSIAVEVE---DADVAFNTSVAHGAKPSSPPVI-LDNLAVIAEVQLYGDV-VLRYV  176 (389)
Q Consensus       106 ~~~~~~~~~~~~l~~hg~gv~~iaf~V~---Dvda~~~~a~a~Ga~~i~~P~~-~~~~~~~~~v~~~gg~-~~~fv  176 (389)
                                     ...+++|+||+|+   |+.+++++++++|..+. .|.. ..+......+++|+|. .+++.
T Consensus        71 ---------------~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~  130 (156)
T d1kw3b2          71 ---------------IPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFG  130 (156)
T ss_dssp             ---------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEE
T ss_pred             ---------------CCCceeEEEEECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEe
Confidence                           1237999999996   56778999999998653 4433 2234556778888875 56654

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=2e-09  Score=86.77  Aligned_cols=95  Identities=17%  Similarity=0.202  Sum_probs=64.3

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEE-EEEcCCc--ceEEEe--ccCCCCCCCCchHHH
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSV-VLANNDE--MVLLPM--NEPVFGTKRKSQIQT  281 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~-~~~~~~g--~v~l~l--~e~~~~~~~~s~i~~  281 (389)
                      .+|.|+++.|.|++++++||+++|||++.......      .+.... .......  ......  .....          
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   64 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENP------EYKYSLAFVGYGPETEEAVIELTYNWGVD----------   64 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEET------TTTEEEEEEESSCTTTSCEEEEEEETTCC----------
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeecccc------ccceeeeeeccceeeeccccccccccccc----------
Confidence            37899999999999999999999999987655422      122222 2221111  111111  11110          


Q ss_pred             HHhhcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          282 YLEHNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                        ....+.++.|+++.+++++++.+++++.    |..+...|
T Consensus        65 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~  100 (135)
T d1f9za_          65 --KYELGTAYGHIALSVDNAAEACEKIRQN----GGNVTREA  100 (135)
T ss_dssp             --CCCCCSSEEEEEEECSCHHHHHHHHHHT----TCEEEEEE
T ss_pred             --cccccccceeeccchHHHHHHHHHHHHc----CCCeecCC
Confidence              0123567999999999999999999999    99888776

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.90  E-value=4e-09  Score=84.34  Aligned_cols=88  Identities=13%  Similarity=0.121  Sum_probs=63.9

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      .|+|+.+.|.|+++++.||+++||+++.+..+         +.  ..+..  |...|.|.+....  ..        ...
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~---------~~--~~~~~--g~~~l~l~~~~~~--~~--------~~~   58 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND---------GF--AQFTI--GSHCLMLSQNHLV--PL--------ENF   58 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET---------TE--EEEEE--TTEEEEEESSCSS--SC--------CCC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC---------Ce--EEEEE--cCceeeeeecccC--CC--------CCC
Confidence            68999999999999999999999999876422         21  12222  3455666443210  00        112


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      +.| -|++|.|+|+++++++|+++    |++++.+|
T Consensus        59 ~~~-~~~~f~v~D~d~~~~~l~~~----G~~i~~~~   89 (115)
T d2i7ra1          59 QSG-IIIHIEVEDVDQNYKRLNEL----GIKVLHGP   89 (115)
T ss_dssp             CSC-EEEEEECSCHHHHHHHHHHH----TCCEEEEE
T ss_pred             Ccc-eEEEEEECCHHHHHHHHHhh----ccccccce
Confidence            334 48999999999999999999    99999876

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.90  E-value=3.1e-09  Score=87.16  Aligned_cols=121  Identities=15%  Similarity=0.035  Sum_probs=79.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCce-----eEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCC
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNT-----VHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTF  109 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r-----~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~  109 (389)
                      ++-+.|+|+++|++||+++|||+++.+....++..     ......++.|+..+.+..........         .  . 
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~---------~--~-   77 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFS---------T--A-   77 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCC---------C--C-
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccc---------c--C-
Confidence            45666779999999999999999876543222110     11234566777777665432111000         0  0 


Q ss_pred             ChHHHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEEee
Q 016432          110 DHAACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       110 ~~~~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                               ...+.+ .+|++.|+|+++++.+++++|++++.+|...+.+.+.+.|+++.|+.-.|.|
T Consensus        78 ---------~~~~~~-~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          78 ---------KSEGSG-VTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ---------CTTSCC-CEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             ---------CCCCcc-eEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence                     012223 4799999999999999999999999999876666678888888888776643

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.88  E-value=1e-08  Score=88.53  Aligned_cols=114  Identities=12%  Similarity=0.027  Sum_probs=78.9

Q ss_pred             CcceEEEEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCC--EEEEEEccCCCCCccccccCCCCCCC
Q 016432           29 RVNRFHHVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGD--LRFVFTAPYSPSISDAADAGNSSASL  106 (389)
Q Consensus        29 ~i~~l~HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~--~~i~l~~p~~~~~~~~~~~~~~~~~~  106 (389)
                      .+++|+||.|.|+|++++++|| +.|||++..+.....+..  ..++++.++  ..+.+...                  
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~--~~~~~~~~~~~~~l~~~~~------------------   60 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVT--YAAWMHRKQTVHDTALTGG------------------   60 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCE--EEEEEESSSSSCSEEEEES------------------
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcce--eeeeeccCccccceecccc------------------
Confidence            4789999999999999999999 689999887654444332  233444332  22332221                  


Q ss_pred             CCCChHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCCcccCC--Ceec-cCceEEEEEEecCCeEEEEee
Q 016432          107 PTFDHAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGAKPSSP--PVIL-DNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       107 ~~~~~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga~~i~~--P~~~-~~~~~~~~v~~~gg~~~~fve  177 (389)
                                    .+.+..|++|.|.+   +.++.+++.++|+....+  |... .+......+++|+|..+++..
T Consensus        61 --------------~~~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~  123 (176)
T d1f1ua2          61 --------------NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  123 (176)
T ss_dssp             --------------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             --------------cCCCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEe
Confidence                          12378999999985   556667899999976432  3321 234557789999999999875

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=98.87  E-value=5e-10  Score=91.03  Aligned_cols=119  Identities=17%  Similarity=0.194  Sum_probs=75.1

Q ss_pred             eEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh---
Q 016432          208 RLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE---  284 (389)
Q Consensus       208 ~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~---  284 (389)
                      ||+|+++.|.|++++++||++ |||........       .+.  +.+ ...+...+.+....       ....+..   
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~-------~~~--~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~   63 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADS-------APH--TEA-VLDGGIRLAWDTVE-------TVRSYDPEWQ   63 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGG-------CSE--EEE-ECGGGCEEEEEEHH-------HHHHHCTTCC
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccc-------ccc--eee-eccceeeeeecccc-------cccccCCCCC
Confidence            799999999999999999976 89987543221       111  111 12234444442211       0111110   


Q ss_pred             hcCCCCcceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                      ...+.+..|++|.|+|   +++++++|+++    |++++.+| ..+-      -+             ....|=+|.+|+
T Consensus        64 ~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~----G~~~~~~p-~~~~------~G-------------~~~~~~~DPdG~  119 (128)
T d1klla_          64 APTGGHRFAIAFEFPDTASVDKKYAELVDA----GYEGHLKP-WNAV------WG-------------QRYAIVKDPDGN  119 (128)
T ss_dssp             CCCSSCSCEEEEECSSHHHHHHHHHHHHHT----TCEEEEEE-EECT------TS-------------EEEEEEECTTSC
T ss_pred             CCccccceeEeeeeccchhhHHHHHHHHhc----cCccccCC-eEcC------CC-------------cEEEEEECCCCC
Confidence            1122346799999987   78899999999    99999877 4310      01             013455788999


Q ss_pred             EEEEecc
Q 016432          362 LLQIFTK  368 (389)
Q Consensus       362 llqift~  368 (389)
                      ++++|+.
T Consensus       120 ~iel~~p  126 (128)
T d1klla_         120 VVDLFAP  126 (128)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEec
Confidence            9999964

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=98.87  E-value=1.1e-08  Score=84.15  Aligned_cols=95  Identities=12%  Similarity=0.156  Sum_probs=65.4

Q ss_pred             EEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCCc
Q 016432          212 AVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAGV  291 (389)
Q Consensus       212 v~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~Gv  291 (389)
                      |++.|.|++++++||+++|||++.+.....      .+.....+..++..+.+.+......  ..        ...+.+.
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~--~~--------~~~~~~~   76 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQH------NGYDGVMFGLPHADYHLEFTQYEGG--ST--------APVPHPD   76 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEE------TTEEEEEEESSSSSEEEEEEEETTC--CC--------CCCCCTT
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeeccc------cceeEEEecCCCCceeeeccccccc--cc--------ccccccC
Confidence            445557999999999999999998765432      2434445566666666665433210  00        0123458


Q ss_pred             ceEEEEeCC---HHHHHHHHHHhcCCCCceecCCCChhh
Q 016432          292 QHLALVSED---IFRTLREMRKRSGVGGFEFMPSPPPTY  327 (389)
Q Consensus       292 qHiAf~vdD---I~~a~~~l~~~~~~~Gv~~l~~P~~~Y  327 (389)
                      +|+||.|+|   +++++++|++.    |++++.+| ..|
T Consensus        77 ~hlaf~v~~~~dv~~~~~~l~~~----G~~~~~~~-~~~  110 (137)
T d1twua_          77 SLLVFYVPNAVELAAITSKLKHM----GYQEVESE-NPY  110 (137)
T ss_dssp             CEEEEECCCHHHHHHHHHHHHHT----TCCEECCS-SHH
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHC----CCeEeCCC-CCC
Confidence            999999876   88999999999    99999765 443

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=98.87  E-value=5.2e-09  Score=84.40  Aligned_cols=119  Identities=16%  Similarity=0.221  Sum_probs=77.6

Q ss_pred             eeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCc--ceEEEeccCCCCCCCCchHHHHHh
Q 016432          207 RRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDE--MVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       207 ~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g--~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++|+|+++.|.|++++++||+++|||++.+......     .............  ..........    ..      ..
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~------~~   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPE-----DKYTLVFLGYGPEMSSTVLELTYNY----GV------TS   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGG-----GTEEEEEEESSCTTTSCEEEEEEET----TC------CC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccc-----cceeeeeeccccccccccccccccc----Cc------cc
Confidence            689999999999999999999999999987655322     1111122221111  1111111110    00      01


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEE
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQ  364 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llq  364 (389)
                      ...+.+..|+++.++++.++++.+...    ++++...| ..+                       ..+|=+|.+|++++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~g~-----------------------~~~~~~DPdGn~iE  118 (139)
T d2c21a1          67 YKHDEAYGHIAIGVEDVKELVADMRKH----DVPIDYED-ESG-----------------------FMAFVVDPDGYYIE  118 (139)
T ss_dssp             CCCCSSEEEEEEEESCHHHHHHHHHHT----TCCEEEEC-SSS-----------------------SEEEEECTTSCEEE
T ss_pred             ccCCCccceeeeehhhHHHHHHHHHHc----CCceeeCC-CCc-----------------------EEEEEECCCCCEEE
Confidence            123456889999999999999999999    98877766 321                       23455788898888


Q ss_pred             Eecc
Q 016432          365 IFTK  368 (389)
Q Consensus       365 ift~  368 (389)
                      ++++
T Consensus       119 l~~~  122 (139)
T d2c21a1         119 LLNE  122 (139)
T ss_dssp             EEEH
T ss_pred             EEEC
Confidence            8764

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.79  E-value=1.1e-08  Score=84.47  Aligned_cols=116  Identities=13%  Similarity=0.163  Sum_probs=73.2

Q ss_pred             cceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHh
Q 016432          205 GIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       205 ~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      ++.+|+||++.|+|++++.+||+++|||++..+..        .+..............+.+...               
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---------------   60 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--------QGRVYLKAWTEVDKFSLVLREA---------------   60 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--------TSCEEEECTTCCBSCSEEEEEC---------------
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--------cCccceecccccceeecccccc---------------
Confidence            58999999999999999999999999999875422        1111111111111111111111               


Q ss_pred             hcCCCCcceEEEEe---CCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCce
Q 016432          285 HNEGAGVQHLALVS---EDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGT  361 (389)
Q Consensus       285 ~~~g~GvqHiAf~v---dDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~  361 (389)
                        ..++.+|++|.+   +||.+++++|+++    |+.+...| ...+      -+.            .--+|=+|.+|+
T Consensus        61 --~~~~~~~~~~~~~~~~dl~~~~~~L~~~----g~~~~~~~-~~~~------~g~------------~~~~~f~DPdG~  115 (145)
T d1mpya1          61 --DEPGMDFMGFKVVDEDALRQLERDLMAY----GCAVEQLP-AGEL------NSC------------GRRVRFQAPSGH  115 (145)
T ss_dssp             --SSCEEEEEEEEESCHHHHHHHHHHHHHH----TCCCEEEC-TTSS------TTB------------CCEEEEECTTSC
T ss_pred             --CcccceeeeeeehhHHHHHHHHHHHHHC----CCcEEECC-Cccc------CCc------------eEEEEEECCCCC
Confidence              123456666555   6789999999999    99887766 3211      010            012466778899


Q ss_pred             EEEEecc
Q 016432          362 LLQIFTK  368 (389)
Q Consensus       362 llqift~  368 (389)
                      .+.+|+.
T Consensus       116 ~iEl~~~  122 (145)
T d1mpya1         116 HFELYAD  122 (145)
T ss_dssp             EEEEESC
T ss_pred             EEEEEEe
Confidence            9999863

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.78  E-value=4.6e-08  Score=78.07  Aligned_cols=106  Identities=20%  Similarity=0.212  Sum_probs=75.6

Q ss_pred             EEE--EEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChH
Q 016432           35 HVE--FWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHA  112 (389)
Q Consensus        35 HI~--~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~  112 (389)
                      |+.  |.|+|++++++||++ |||++....+    .    ...+..++..+.+.......                    
T Consensus         3 ~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~--------------------   53 (120)
T d1ecsa_           3 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA----G----WMILQRGDLMLEFFAHPGLD--------------------   53 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS----S----EEEEEETTEEEEEEECTTCC--------------------
T ss_pred             eEEEEEEeCCHHHHHHHHHH-cCCeeEEecC----c----eeeeecceeccccccccccc--------------------
Confidence            444  999999999999985 9999987643    1    33445566666655432111                    


Q ss_pred             HHHHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCC-------CeeccCceEEEEEEecCCeEEEEee
Q 016432          113 ACRSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP-------PVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       113 ~~~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~-------P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                      +        ...-.++++.|+|+++.+++++++|+++...       |...+.+.+...+++|+|+.+++++
T Consensus        54 ~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q  117 (120)
T d1ecsa_          54 P--------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQ  117 (120)
T ss_dssp             G--------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEE
T ss_pred             c--------CCCCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEE
Confidence            0        0123468999999999999999999987654       3333345567789999999999987

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.76  E-value=1e-08  Score=80.25  Aligned_cols=87  Identities=21%  Similarity=0.221  Sum_probs=61.0

Q ss_pred             ceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcc-eEEEeccCCCCCCCCchHHHHHh
Q 016432          206 IRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEM-VLLPMNEPVFGTKRKSQIQTYLE  284 (389)
Q Consensus       206 ~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~-v~l~l~e~~~~~~~~s~i~~fl~  284 (389)
                      +++| +..+.|.|++++.+||+++|||+..+..+          .. ..+...++. ..+......              
T Consensus         1 v~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~--------------   54 (111)
T d2pjsa1           1 VRRV-VANIATPEPARAQAFYGDILGMPVAMDHG----------WI-VTHASPLEAHAQVSFAREG--------------   54 (111)
T ss_dssp             EEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----------SE-EEEEEEEEEEEEEEEESSS--------------
T ss_pred             CeEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----------ce-eEeccccccceeeeccccc--------------
Confidence            3567 68899999999999999999999876432          11 222222222 222222211              


Q ss_pred             hcCCCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          285 HNEGAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       285 ~~~g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                       ..+.+..|++|.++|+++.+++|++.    |++++.+|
T Consensus        55 -~~~~~~~~~~~~~~dvd~~~~~l~~~----g~~~~~~p   88 (111)
T d2pjsa1          55 -GSGTDVPDLSIEVDNFDEVHARILKA----GLPIEYGP   88 (111)
T ss_dssp             -BTTBCCCSEEEEESCHHHHHHHHHHT----TCCCSEEE
T ss_pred             -CCCCceeEEEEEecCHHHHHHHHHhh----ccccccCC
Confidence             12345689999999999999999999    99998877

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.74  E-value=1e-08  Score=85.28  Aligned_cols=114  Identities=16%  Similarity=0.079  Sum_probs=77.6

Q ss_pred             ccceeEeEEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEc-C-CcceEEEeccCCCCCCCCchHHH
Q 016432          204 YGIRRLDHAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLAN-N-DEMVLLPMNEPVFGTKRKSQIQT  281 (389)
Q Consensus       204 ~~~~~iDHv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~-~-~g~v~l~l~e~~~~~~~~s~i~~  281 (389)
                      ..+.+|+||.+.|.|++++++||+++|||+......         +  ...+.. . .....+.+..             
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~-------------   67 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---------N--TIYLRSLEEFIHHNLVLRQ-------------   67 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---------S--EEEEECTTCCSSCSEEEEE-------------
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC---------C--ceeeecccccccceeeccc-------------
Confidence            358999999999999999999999999999976421         1  112211 1 1111122211             


Q ss_pred             HHhhcCCCCcceEEEEeC---CHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCC
Q 016432          282 YLEHNEGAGVQHLALVSE---DIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDD  358 (389)
Q Consensus       282 fl~~~~g~GvqHiAf~vd---DI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~  358 (389)
                          ...+|++|+||.+.   |+.+++++|+++    |+++...| ..-.      -+            ....+|=+|.
T Consensus        68 ----~~~~~~~h~~~~~~~~~dl~~~~~~l~~~----G~~~~~~~-~~~~------~g------------~~~~~~~~DP  120 (146)
T d1f1ua1          68 ----GPIAAVAAFAYRVKSPAEVDAAEAYYKEL----GCRTERRK-EGFT------KG------------IGDSVRVEDP  120 (146)
T ss_dssp             ----CSSCEEEEEEEEESSHHHHHHHHHHHHHT----TCCEEEET-TCSS------TT------------BCSEEEEECT
T ss_pred             ----cCCCCCceeeEeeccchhHHHHHHHHHHc----CCceeecc-cccc------CC------------ceEEEEEECC
Confidence                13457999999996   689999999999    99988766 2210      00            0123456788


Q ss_pred             CceEEEEecc
Q 016432          359 QGTLLQIFTK  368 (389)
Q Consensus       359 ~g~llqift~  368 (389)
                      +|..+.+|..
T Consensus       121 dG~~iEl~~~  130 (146)
T d1f1ua1         121 LGFPYEFFYE  130 (146)
T ss_dssp             TSCEEEEECC
T ss_pred             CCcEEEEEEe
Confidence            9999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.72  E-value=1.1e-07  Score=75.69  Aligned_cols=104  Identities=13%  Similarity=0.033  Sum_probs=76.6

Q ss_pred             EEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHHHH
Q 016432           37 EFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAACRS  116 (389)
Q Consensus        37 ~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (389)
                      .|.|+|++++++||++.|||++....+    .    ...+..++..+.+......                     ..  
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~----~~~~~~~~~~l~l~~~~~~---------------------~~--   58 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D----FAGVRRGDIRLHISRTEHQ---------------------IV--   58 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S----EEEEEETTEEEEEEECSCH---------------------HH--
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c----eeEeeeeeeeeeeeccccc---------------------cc--
Confidence            499999999999999999999887643    1    3456678888887764211                     11  


Q ss_pred             HHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCCCee-------ccCceEEEEEEecCCeEEEEee
Q 016432          117 FAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI-------LDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       117 ~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~P~~-------~~~~~~~~~v~~~gg~~~~fve  177 (389)
                            ....++++.|.|+++++++++++++.....+..       .....+...+++|+|.+++|..
T Consensus        59 ------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~  120 (122)
T d1jifa_          59 ------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             ------HTTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             ------cceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEe
Confidence                  133569999999999999999999887654321       1123467788899999888864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.46  E-value=1.9e-06  Score=67.67  Aligned_cols=105  Identities=11%  Similarity=-0.023  Sum_probs=74.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEecCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCChHHH
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFDHAAC  114 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (389)
                      +-.|.|+|++++++||++.|||++..+.+    .    ...++.++..+.+.....+.                      
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~----~~~~~~~~~~l~~~~~~~~~----------------------   56 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----D----FAGVVRDDVTLFISAVQDQV----------------------   56 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----S----EEEEEETTEEEEEEECSCTT----------------------
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----C----eeEEecccceeecccccccc----------------------
Confidence            44589999999999999999999887653    1    34556788887776542221                      


Q ss_pred             HHHHHhcCCceeEEEEEEcCHHHHHHHHHHCCCcccCC--------CeeccCceEEEEEEecCCeEEEEee
Q 016432          115 RSFAASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSP--------PVILDNLAVIAEVQLYGDVVLRYVS  177 (389)
Q Consensus       115 ~~~l~~hg~gv~~iaf~V~Dvda~~~~a~a~Ga~~i~~--------P~~~~~~~~~~~v~~~gg~~~~fve  177 (389)
                             ..+..++.+.+++++..++++.+.+......        |.... ..+...+++|+|..++|+.
T Consensus        57 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          57 -------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQP-WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             -------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEET-TEEEEEEECTTCCEEEEEE
T ss_pred             -------CCCCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecC-CEEEEEEECCCCCEEEEEE
Confidence                   1134568899999999999988877665443        33322 2346678889998888864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.32  E-value=6.5e-06  Score=66.58  Aligned_cols=100  Identities=15%  Similarity=0.044  Sum_probs=56.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEeccccc-ccccC-ceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVG-TSESG-LNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEG  288 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~-~~~~g-~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g  288 (389)
                      ++.+.|+|.++|++||+++||+++......++.. ....+ +....+.-.+..+.+.-..+..+  ...      ....+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~--~~~------~~~~~   81 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPG--FST------AKSEG   81 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTT--CCC------CCTTS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccc--ccc------CCCCC
Confidence            4677778999999999999999987554322110 01111 22222333233332222222110  000      01122


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          289 AGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       289 ~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      . --||++.|+|+++++.++.++    |++++.+|
T Consensus        82 ~-~~~l~~~v~d~~~~~~~~~~~----g~~~~~~~  111 (135)
T d1xy7a_          82 S-GVTFLLGTKDAEAAVAKAVDA----GAVKVEVT  111 (135)
T ss_dssp             C-CCEEEEECSCHHHHHHHHHHT----TCEECCCC
T ss_pred             c-ceEEEEeecCcceeEEEeecc----cceEecCc
Confidence            2 349999999999999999999    99999988

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.19  E-value=1e-05  Score=65.84  Aligned_cols=111  Identities=13%  Similarity=0.031  Sum_probs=72.8

Q ss_pred             EeC-CHHHHHHHHHHhcCCcEEEEecCCCCc----------eeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           39 WCT-DATNTARRFSWGLGMPIVAKSDLSTGN----------TVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        39 ~V~-D~~~a~~fy~~~lGF~~~~~~~~~~g~----------r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      +.. |+++|++||+++|||++.......+..          -......++.++..+.+........              
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~--------------   74 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP--------------   74 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC--------------
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCccc--------------
Confidence            344 999999999999999998754221111          0122344566776666554211110              


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCHH--HHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeEEEE
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDAD--VAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVLRY  175 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dvd--a~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~~f  175 (389)
                                  ....+-..+++.+++.|  +++.+++++|++++.+|...+.+.+...++++.|+.-.+
T Consensus        75 ------------~~~~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i  132 (137)
T d1u6la_          75 ------------YEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMV  132 (137)
T ss_dssp             ------------CCCCCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEE
T ss_pred             ------------ccCCCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEE
Confidence                        01123456888887544  668889999999999998877767788888888875433

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.15  E-value=3.9e-06  Score=66.18  Aligned_cols=116  Identities=11%  Similarity=-0.029  Sum_probs=70.9

Q ss_pred             EeEE-EEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          209 LDHA-VGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       209 iDHv-~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      ...+ .+.|.|++++++||+++|||++.+...         + . ..+..  +...+.+.+...    .          .
T Consensus         5 ~~~~pvL~v~Dl~~s~~FY~~vLG~~~~~~~~---------~-~-~~~~~--~~~~l~l~~~~~----~----------~   57 (122)
T d1jifa_           5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR---------D-F-AGVRR--GDIRLHISRTEH----Q----------I   57 (122)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHTTCCEEEEECS---------S-E-EEEEE--TTEEEEEEECSC----H----------H
T ss_pred             eeeEEEEEcCCHHHHHHHHHhhhCCceEecCC---------c-e-eEeee--eeeeeeeecccc----c----------c
Confidence            3444 489999999999999999999865421         1 1 22232  234455544421    0          0


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCCChhhhHhHhhhhCCCCChhhHHHHHHcCceeecCCCceEEEEec
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIKQCEELGVLVDRDDQGTLLQIFT  367 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P~~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~D~~g~llqift  367 (389)
                      ..+.+|+++.++||++..+++++.    +......+ ..   ..   ..  ......    -...+|=.|.+|+++.+.|
T Consensus        58 ~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~-~~---~~---~~--~~~~~~----g~~~~~~~DPdGn~ief~~  120 (122)
T d1jifa_          58 VADNTSAWIEVTDPDALHEEWARA----VSTDYADT-SG---PA---MT--PVGESP----AGREFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             HHTTCEEEEEESCHHHHHHHHHTT----SCSCTTCT-TS---CE---EC--CCEEET----TEEEEEEECTTCCEEEEEE
T ss_pred             ccceeEEEEeechhHHHHHHHHhh----cceEEeec-cc---cc---cC--ccccCC----CeEEEEEECCCCCEEEEEe
Confidence            123579999999999999999999    88766554 11   00   00  000000    0113466778899988766


Q ss_pred             c
Q 016432          368 K  368 (389)
Q Consensus       368 ~  368 (389)
                      .
T Consensus       121 ~  121 (122)
T d1jifa_         121 G  121 (122)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.14  E-value=8.2e-06  Score=64.39  Aligned_cols=83  Identities=18%  Similarity=0.170  Sum_probs=55.5

Q ss_pred             eEEE--EecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcC
Q 016432          210 DHAV--GNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNE  287 (389)
Q Consensus       210 DHv~--~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~  287 (389)
                      ||+.  +.|.|++++.+||++ |||++.+...         +  ...+......+.+......    .           .
T Consensus         2 ~~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~----~-----------~   54 (120)
T d1ecsa_           2 DQATPNLPSRDFDSTAAFYER-LGFGIVFRDA---------G--WMILQRGDLMLEFFAHPGL----D-----------P   54 (120)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEECS---------S--EEEEEETTEEEEEEECTTC----C-----------G
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-cCCeeEEecC---------c--eeeeecceecccccccccc----c-----------c
Confidence            5776  888999999999987 9999976422         1  1222222222333222221    1           1


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHhcCCCCceecCCC
Q 016432          288 GAGVQHLALVSEDIFRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       288 g~GvqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      ...-.|+++.|+|++++++.++++    |+.+...+
T Consensus        55 ~~~~~~~~~~~~d~~~~~~~~~~~----~~~~~~~~   86 (120)
T d1ecsa_          55 LASWFSCCLRLDDLAEFYRQCKSV----GIQETSSG   86 (120)
T ss_dssp             GGCCCEEEEEESCHHHHHHHHHHT----TCCBCSSS
T ss_pred             CCCCcEEEEEECCHHHHHHHHhhh----hhhhcccc
Confidence            123578999999999999999999    88876654

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=97.92  E-value=2.8e-05  Score=60.54  Aligned_cols=81  Identities=11%  Similarity=-0.051  Sum_probs=54.6

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEEecccccccccCceEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCCC
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGAG  290 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~~~~d~~~~~~g~~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~G  290 (389)
                      +-.+.|.|++++++||+++|||++.++..         +  ...+...  ...+.+.....   .           ...+
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~---------~--~~~~~~~--~~~l~~~~~~~---~-----------~~~~   59 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED---------D--FAGVVRD--DVTLFISAVQD---Q-----------VVPD   59 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS---------S--EEEEEET--TEEEEEEECSC---T-----------TTGG
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC---------C--eeEEecc--cceeecccccc---c-----------cCCC
Confidence            34588999999999999999999876532         1  1222332  33344433321   0           1235


Q ss_pred             cceEEEEeCCHHHHHHHHHHhcCCCCceecCC
Q 016432          291 VQHLALVSEDIFRTLREMRKRSGVGGFEFMPS  322 (389)
Q Consensus       291 vqHiAf~vdDI~~a~~~l~~~~~~~Gv~~l~~  322 (389)
                      ..++.+.++++......+.+.    +...+..
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   87 (120)
T d1xrka_          60 NTQAWVWVRGLDELYAEWSEV----VSTNFRD   87 (120)
T ss_dssp             GCEEEEEEECHHHHHHHHTTT----SBSCTTT
T ss_pred             CceEEEeeccHHHHHHHHHHh----hhHHhhh
Confidence            689999999999999998887    6665554

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.74  E-value=0.00045  Score=55.76  Aligned_cols=110  Identities=15%  Similarity=-0.006  Sum_probs=69.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCcEEEEec-------CCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCC
Q 016432           35 HVEFWCTDATNTARRFSWGLGMPIVAKSD-------LSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLP  107 (389)
Q Consensus        35 HI~~~V~D~~~a~~fy~~~lGF~~~~~~~-------~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~  107 (389)
                      |+.|.-.|+++|++||+++||++.+.+..       .+.| + .....++.++..|.+........ .            
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g-~-v~ha~l~i~~~~i~~~d~~~~~~-~------------   73 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEG-S-VLKALFRLGDQSVHCIDSHVRHA-F------------   73 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTT-S-EEEEEEEETTEEEEEEEESSCCS-C------------
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCC-C-EEEEEEEECCEEEEEecCCCCCC-C------------
Confidence            45555568999999999999998765421       1122 2 33456678888888775321110 0            


Q ss_pred             CCChHHHHHHHHhcCCceeEEEEEEcCH--HHHHHHHHHCCCcccCCCeeccCceEEEEEEecCCeE
Q 016432          108 TFDHAACRSFAASHGLAARSIAVEVEDA--DVAFNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVV  172 (389)
Q Consensus       108 ~~~~~~~~~~l~~hg~gv~~iaf~V~Dv--da~~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~  172 (389)
                                  ..+.+ ..+++.+++.  .+.+.++++.|++++.+|...+.+-++..|+++-|+.
T Consensus        74 ------------~~~~~-~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~  127 (134)
T d1u7ia_          74 ------------DFTPA-FSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVS  127 (134)
T ss_dssp             ------------CCCTT-EEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCE
T ss_pred             ------------CCCCc-eEEEEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCE
Confidence                        01223 3467776654  4447778899999988887765555566666655554

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.06  E-value=0.0049  Score=49.10  Aligned_cols=107  Identities=12%  Similarity=0.015  Sum_probs=66.4

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCcEEEEe------cCCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCC
Q 016432           36 VEFWCT-DATNTARRFSWGLGMPIVAKS------DLSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPT  108 (389)
Q Consensus        36 I~~~V~-D~~~a~~fy~~~lGF~~~~~~------~~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~  108 (389)
                      -.|++. |+++|++||+++||-..+.+.      ......+ .....++.++..|.+.... +.                
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~-i~ha~l~i~g~~~~~~d~~-~~----------------   69 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGT-VQHSIFTLNGQVFMAIDAN-SG----------------   69 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTS-EEEEEEEETTEEEEEEC---------------------
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCc-EEEEEEEECCEEEEeecCC-CC----------------
Confidence            456665 999999999999987655432      1111122 3456678888888876421 11                


Q ss_pred             CChHHHHHHHHhcCCceeEEEEEEcCHHHH--HHHHHHCCCcccCCCeeccCceEEEEEEecCCeEE
Q 016432          109 FDHAACRSFAASHGLAARSIAVEVEDADVA--FNTSVAHGAKPSSPPVILDNLAVIAEVQLYGDVVL  173 (389)
Q Consensus       109 ~~~~~~~~~l~~hg~gv~~iaf~V~Dvda~--~~~a~a~Ga~~i~~P~~~~~~~~~~~v~~~gg~~~  173 (389)
                                  ++.+ ..+++.++|.+.+  +-++.+.|++++.++...+.+.++..|+++-|+.-
T Consensus        70 ------------~~~~-~s~~v~~~~~~e~~~~~~~L~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W  123 (129)
T d1tsja_          70 ------------TELP-ISLFVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQDKFGVSF  123 (129)
T ss_dssp             ---------------C-CCEEEECSSHHHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEECTTSCEE
T ss_pred             ------------CCCC-EEEEeccCCHHHHHHHHHHhccCCEEecccccccccceEEEEECCCCCEE
Confidence                        1112 2477888877764  44556678898888877666566677776655543

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.42  E-value=0.078  Score=41.63  Aligned_cols=90  Identities=12%  Similarity=-0.085  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHhhCCeEeEEEeccccc------ccccCc-eEEEEEcCCcceEEEeccCCCCCCCCchHHHHHhhcCCC
Q 016432          217 PELAPAVAYVKSFTGFHEFAEFTAEDVG------TSESGL-NSVVLANNDEMVLLPMNEPVFGTKRKSQIQTYLEHNEGA  289 (389)
Q Consensus       217 ~dl~~~~~fY~~~lGf~~~~~~~~~d~~------~~~~g~-~s~~~~~~~g~v~l~l~e~~~~~~~~s~i~~fl~~~~g~  289 (389)
                      .+.++|++||+++||+++......++..      ....|. ....+...+.  .+.+.....  ...        . ...
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~--~~~~~d~~~--~~~--------~-~~~   78 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF--ALMASDNHP--AYP--------Y-EGI   78 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE--EEEEEECCT--TSC--------C-CCC
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe--EEEecccCC--ccc--------c-cCC
Confidence            3899999999999999987665433211      011121 1111222221  222211110  000        0 122


Q ss_pred             CcceEEEEeCCH--HHHHHHHHHhcCCCCceecCCC
Q 016432          290 GVQHLALVSEDI--FRTLREMRKRSGVGGFEFMPSP  323 (389)
Q Consensus       290 GvqHiAf~vdDI--~~a~~~l~~~~~~~Gv~~l~~P  323 (389)
                      +-.++++.+++-  .+++.+..++    |.+++.+|
T Consensus        79 ~~~~~~l~~~~~d~~~~~~~~l~~----G~~v~~p~  110 (137)
T d1u6la_          79 KGCSISLNVDSKAEAERLFNALAE----GGSVQMPL  110 (137)
T ss_dssp             CSEEEEEECSSHHHHHHHHHHHHT----TSEEEEEE
T ss_pred             CcEEEEEEcCCHHHHHHHHhhccc----CceeecCc
Confidence            347788888764  4567777788    99998877

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.70  E-value=2.3  Score=32.66  Aligned_cols=28  Identities=11%  Similarity=0.002  Sum_probs=21.4

Q ss_pred             EEEEecCCHHHHHHHHHHhhCCeEeEEE
Q 016432          211 HAVGNVPELAPAVAYVKSFTGFHEFAEF  238 (389)
Q Consensus       211 Hv~~~V~dl~~~~~fY~~~lGf~~~~~~  238 (389)
                      ++.++-.+.++|++||+++||.+.....
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~   36 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQI   36 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEE
Confidence            4445556899999999999999865443

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.60  E-value=2.1  Score=34.31  Aligned_cols=81  Identities=19%  Similarity=0.226  Sum_probs=49.5

Q ss_pred             EEeCCHHHHHHHHHHhcC-CcEEEEe--c----CCCCceeEEEEEEEcCCEEEEEEccCCCCCccccccCCCCCCCCCCC
Q 016432           38 FWCTDATNTARRFSWGLG-MPIVAKS--D----LSTGNTVHASYLLRSGDLRFVFTAPYSPSISDAADAGNSSASLPTFD  110 (389)
Q Consensus        38 ~~V~D~~~a~~fy~~~lG-F~~~~~~--~----~~~g~r~~~~~~~~~g~~~i~l~~p~~~~~~~~~~~~~~~~~~~~~~  110 (389)
                      +.-.|+++|+.||.++|| .++....  +    .+...+ +....++.|+..|..... .++                + 
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~-Vmha~l~i~g~~lm~sD~-~~~----------------~-   68 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGD-VLTVEFRVMGIPCLGLNG-GPA----------------F-   68 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTS-EEEEEEEETTEEEEEEEC-CTT----------------C-
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCc-EEEEEEEECCeEEEeecC-CCC----------------C-
Confidence            455899999999999995 4433321  1    011122 334556778888776542 221                0 


Q ss_pred             hHHHHHHHHhcCCceeEEEEEEcC---HHHHHHHHHHCCC
Q 016432          111 HAACRSFAASHGLAARSIAVEVED---ADVAFNTSVAHGA  147 (389)
Q Consensus       111 ~~~~~~~l~~hg~gv~~iaf~V~D---vda~~~~a~a~Ga  147 (389)
                               ..+.++ ++++.++|   +++.|++|.+.|-
T Consensus        69 ---------~~~~~~-sl~l~~d~~eE~d~~f~~LsegG~   98 (156)
T d1u69a_          69 ---------RHSEAF-SFQVATDDQAETDRLWNAIVDNGG   98 (156)
T ss_dssp             ---------CCCTTE-EEEEEESSHHHHHHHHHHHHHTTC
T ss_pred             ---------CCCCCe-EEEEecCCHHHHHHHHHHHhccCC
Confidence                     023343 68888886   7788888888773