Citrus Sinensis ID: 016487

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANHVQSVLSKE
ccHHcHHHHHHccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHccccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccHHHHccccccHHHcccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccHHccccccccccccEEEEccccccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHccccEEEEcccccccccHHHHHHHcccccEEEEccccccccccccccccccEEEEEEcccccccccHHHHHccccHHHHHHHHHHHHHHcccEEEcccccccccccccHHHHHHHHHHHHHHHHHHcc
cccHHcHHHHHHHcccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHccEEEEEEcccccHHHHccccccccHHHHHHHHHHHHHccHHHHHcccccEEEEEccccccHcccccccccccHHHcccccHcccEEEEEEccccccccccEccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHcccEcccccccccccHHHHHHHHHcccEEEEccccEEEEcccccccccccEEEEEcHHHccccccHHHHHHcccHHHHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHHHHHHHHHHHccc
mpsefnlglvknchhlnmhrdmcphvanhglgqplqhvnavspacwfATNQFTAAMIFHARLenhplrtwdpsratlfyvpfygglhasskfretnltaRDELAVRFSEflesqpwwqrnngkdhFVVLGRTAWdfmrtksgpdygastllnlprvqnlsvlaiernpwrtnqhgipypsyfhpctssqvltwqhsmrlskrphlfsfvgaprkgsqRAAIRYELIKQCGESIRCKlltcrygsgasnkcsspseiLGVMsksqfclqapgdsftrrstfdsvlagcipvfFSRHTAYTQYMWylpqdaeeysVYINGENGNATRRIEDELMKIPRERVERMRKKVIDliprvtykhpnasddgefEDAVDVAVAALANHVQSVLSKE
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFlesqpwwqrnngkDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFsfvgaprkgsQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRkkvidliprvtykhpnasddgEFEDAVDVAVAALANHVQSVLSKE
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEdavdvavaalaNHVQSVLSKE
*****NLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGA*********ILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNAT**I*************RMRKKVIDLIPRVTYKH********FEDAVDVAVAALANH********
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALAN**QS*****
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANHVQSVLSKE
MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANHVQSV****
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MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANHVQSVLSKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query388 2.2.26 [Sep-21-2011]
Q7XJ98619 Xyloglucan galactosyltran no no 0.966 0.605 0.429 6e-86
Q8H038588 Xyloglucan galactosyltran no no 0.969 0.639 0.434 9e-86
Q10SX7427 Probable glucuronosyltran no no 0.574 0.522 0.240 3e-05
>sp|Q7XJ98|KATAM_ARATH Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1 Back     alignment and function desciption
 Score =  318 bits (814), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 165/384 (42%), Positives = 238/384 (61%), Gaps = 9/384 (2%)

Query: 1   MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAV-SPACWFATNQFTAAMIFH 59
           +PS+FN  ++++C  L++  +MC    N GLG PL++V  V S   W+ATNQF   +IF 
Sbjct: 161 LPSKFNEDMLRDCKKLSLWTNMCKFTTNAGLGPPLENVEGVFSDEGWYATNQFAVDVIFS 220

Query: 60  ARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQR 119
            R++ +   T D S A   +VPFY G   +      N++ RD  ++   ++L  +P W  
Sbjct: 221 NRMKQYKCLTNDSSLAAAIFVPFYAGFDIARYLWGYNISRRDAASLELVDWLMKRPEWDI 280

Query: 120 NNGKDHFVVLGRTAWDFMR-TKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQHGIPY 178
             GKDHF+V GR  WDF R ++   D+G + LL LP  +N+S+L +E +PW  N  GIPY
Sbjct: 281 MRGKDHFLVAGRITWDFRRLSEEETDWG-NKLLFLPAAKNMSMLVVESSPWNANDFGIPY 339

Query: 179 PSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLL 238
           P+YFHP   S+V  WQ  MR  +R  LFSF GAPR  + + +IR ++I QC  S   KLL
Sbjct: 340 PTYFHPAKDSEVFEWQDRMRNLERKWLFSFAGAPRPDNPK-SIRGQIIDQCRNSNVGKLL 398

Query: 239 TCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAY 298
            C +G    +KC +PS I+ +   S FCLQ  GDS+TRRS FDS+LAGCIPVFF   +AY
Sbjct: 399 ECDFG---ESKCHAPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAY 455

Query: 299 TQYMWYLPQDAEEYSVYINGENGNATR-RIEDELMKIPRERVERMRKKVIDLIPRVTYKH 357
           TQY W+LP++   YSV+I  ++       IE+ L++IP ++V+ MR+ VI+LIPR+ Y  
Sbjct: 456 TQYTWHLPKNYTTYSVFIPEDDVRKRNISIEERLLQIPAKQVKIMRENVINLIPRLIYAD 515

Query: 358 PNASDDGEFEDAVDVAVAALANHV 381
           P +  + + +DA DV+V A+ + V
Sbjct: 516 PRSELETQ-KDAFDVSVQAVIDKV 538
Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall. Interacts with actin and is required for the proper endomembrane organization and for the cell elongation. Not involved in the trafficking from the endoplasmic reticulum to the vacuoles.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8H038|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1 Back     alignment and function description
>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query388
224144348421 predicted protein [Populus trichocarpa] 0.953 0.878 0.664 1e-144
224061383400 predicted protein [Populus trichocarpa] 0.953 0.925 0.666 1e-144
225457534 511 PREDICTED: xyloglucan galactosyltransfer 0.961 0.729 0.629 1e-143
449451619481 PREDICTED: xyloglucan galactosyltransfer 0.958 0.773 0.625 1e-141
297841569457 exostosin family protein [Arabidopsis ly 0.961 0.816 0.588 1e-135
15221412455 Exostosin family protein [Arabidopsis th 0.956 0.815 0.593 1e-134
26451572455 unknown protein [Arabidopsis thaliana] 0.956 0.815 0.598 1e-134
356576989465 PREDICTED: xyloglucan galactosyltransfer 0.953 0.795 0.594 1e-129
302817463 530 galactosyltransferase-like protein [Sela 0.958 0.701 0.446 3e-89
302812249 530 galactosyltransferase-like protein [Sela 0.958 0.701 0.446 4e-89
>gi|224144348|ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|222873674|gb|EEF10805.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/387 (66%), Positives = 306/387 (79%), Gaps = 17/387 (4%)

Query: 1   MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPAC-WFATNQFTAAMIFH 59
           MP+EFN GL+K+C HLN + DMCPHVAN GLGQPL ++   + A  WFAT+QF A MIFH
Sbjct: 33  MPAEFNKGLLKDCSHLNAYTDMCPHVANRGLGQPLSYMAESAVATTWFATHQFIAEMIFH 92

Query: 60  ARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQR 119
           AR+ENHP R  DP  A LFYVPFYGGL ASSKF + NLTARDELAVR +++L S+PWW+R
Sbjct: 93  ARMENHPCRVLDPINAKLFYVPFYGGLDASSKFHDANLTARDELAVRLADYLRSKPWWER 152

Query: 120 NNGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRT--NQHGIP 177
           ++GKDHF+VLGRTAWDF+R  +  ++G S LLNLP VQN+SVL +ERNPW    NQHGIP
Sbjct: 153 HHGKDHFLVLGRTAWDFLRRNN--NFGNS-LLNLPDVQNMSVLTVERNPWDRVHNQHGIP 209

Query: 178 YPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKL 237
           YPSYFHP TS +++TWQ+ MR S RPHLFSF+G PR+G ++AA+R ELI+QC ES RCKL
Sbjct: 210 YPSYFHPYTSHEMMTWQNKMRQSSRPHLFSFIGGPRRGVEKAAVRDELIRQCSESGRCKL 269

Query: 238 LTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTA 297
           L C  G G S KC  P E+L VMS+SQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS HT 
Sbjct: 270 LKC--GKGPS-KCHYPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSPHTV 326

Query: 298 YTQYMWYLPQ-DAEEYSVYING---ENGNATRR---IEDELMKIPRERVERMRKKVIDLI 350
           YTQY W+ P  DA EYSVYI+    + GN ++R   IE+EL KI RE+VERMR  VI+L+
Sbjct: 327 YTQYEWFFPAGDAREYSVYIDENALKTGNGSKRVVSIEEELFKIEREQVERMRSAVINLM 386

Query: 351 PRVTYKHPNASDDGEFEDAVDVAVAAL 377
           PR+TY HPNA+D G F+DAVDVA+ AL
Sbjct: 387 PRLTYAHPNATDLG-FQDAVDVALEAL 412

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061383|ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|222847710|gb|EEE85257.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225457534|ref|XP_002270383.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Vitis vinifera] Back     alignment and taxonomy information
>gi|449451619|ref|XP_004143559.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Cucumis sativus] gi|449504889|ref|XP_004162323.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|297841569|ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297334507|gb|EFH64925.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15221412|ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana] gi|12324886|gb|AAG52396.1|AC011915_10 hypothetical protein; 19613-17891 [Arabidopsis thaliana] gi|332196676|gb|AEE34797.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26451572|dbj|BAC42883.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356576989|ref|XP_003556612.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|302817463|ref|XP_002990407.1| galactosyltransferase-like protein [Selaginella moellendorffii] gi|300141792|gb|EFJ08500.1| galactosyltransferase-like protein [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302812249|ref|XP_002987812.1| galactosyltransferase-like protein [Selaginella moellendorffii] gi|300144431|gb|EFJ11115.1| galactosyltransferase-like protein [Selaginella moellendorffii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query388
TAIR|locus:2201297455 AT1G68470 "AT1G68470" [Arabido 0.904 0.771 0.608 4.9e-124
TAIR|locus:2066091720 AT2G29040 "AT2G29040" [Arabido 0.922 0.497 0.467 1.5e-81
TAIR|locus:2039002619 MUR3 "AT2G20370" [Arabidopsis 0.914 0.573 0.435 3e-78
TAIR|locus:2129281521 AT4G13990 "AT4G13990" [Arabido 0.922 0.687 0.427 9e-77
TAIR|locus:2046372509 AT2G32750 "AT2G32750" [Arabido 0.902 0.687 0.423 5.7e-75
TAIR|locus:2045527479 AT2G31990 "AT2G31990" [Arabido 0.930 0.753 0.403 6.5e-74
TAIR|locus:2167933517 GT18 "AT5G62220" [Arabidopsis 0.902 0.676 0.430 1.2e-72
TAIR|locus:2046387468 GT13 "AT2G32740" [Arabidopsis 0.904 0.75 0.401 1.3e-68
TAIR|locus:2031346664 RHS8 "AT1G63450" [Arabidopsis 0.894 0.522 0.391 2.8e-66
TAIR|locus:2155110561 AT5G41250 "AT5G41250" [Arabido 0.894 0.618 0.377 3.2e-65
TAIR|locus:2201297 AT1G68470 "AT1G68470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
 Identities = 221/363 (60%), Positives = 282/363 (77%)

Query:     1 MPSEFNLGLVKNCHHLNMHRDMCPHVANHGLGQPLQHVNAVSPACWFATNQFTAAMIFHA 60
             +P EFN+GL++NC HLN++ +MCPHVAN+GLGQPL H    S   WF+T+QF A MIFHA
Sbjct:    78 LPKEFNIGLLQNCRHLNIYTNMCPHVANNGLGQPL-HRGRTS---WFSTHQFIAEMIFHA 133

Query:    61 RLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRN 120
             R+ENHP RT++P  A +FYVPFYGGL+ASS FRE NLT RDELAVR   ++  Q WW+R+
Sbjct:   134 RVENHPCRTYEPDTADIFYVPFYGGLYASSVFREQNLTKRDELAVRLVNYISGQRWWKRS 193

Query:   121 NGKDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAIERNPWRTNQH-GIPYP 179
             NG+DHF+ +GRTAWDFMR+ S  D+GA+ L+ +PRV N+SVL +ER PW  + H GIPYP
Sbjct:   194 NGRDHFLAIGRTAWDFMRS-SDTDFGANMLMQMPRVMNMSVLTVERQPWNGDNHFGIPYP 252

Query:   180 SYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLT 239
             SYFHP TS++++TWQ  M+  +RP+LFSFVG PRKG ++AAIR ELIKQC ES  C+LL 
Sbjct:   253 SYFHPYTSAEMVTWQDKMKNVERPNLFSFVGGPRKGLEKAAIRDELIKQCAESSHCELLK 312

Query:   240 CRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYT 299
             C  G    ++C +P  +LGVM++S+FCLQAPGDSFTRRSTFD++LAGCIPVFFS HT YT
Sbjct:   313 CENGG---SRCHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAMLAGCIPVFFSPHTMYT 369

Query:   300 QYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPRVTYKHPN 359
             QYMWYLP D   YSV+++ +N      IE EL++I    V +MR+ VIDLIPR+TY HPN
Sbjct:   370 QYMWYLPDDKRSYSVFMDEKNNT---HIEQELLRISENEVVQMREIVIDLIPRLTYAHPN 426

Query:   360 ASD 362
             +++
Sbjct:   427 STN 429
GO:0003824 "catalytic activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2066091 AT2G29040 "AT2G29040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039002 MUR3 "AT2G20370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129281 AT4G13990 "AT4G13990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046372 AT2G32750 "AT2G32750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045527 AT2G31990 "AT2G31990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167933 GT18 "AT5G62220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046387 GT13 "AT2G32740" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031346 RHS8 "AT1G63450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155110 AT5G41250 "AT5G41250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query388
pfam03016292 pfam03016, Exostosin, Exostosin family 2e-57
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  189 bits (481), Expect = 2e-57
 Identities = 96/303 (31%), Positives = 135/303 (44%), Gaps = 54/303 (17%)

Query: 31  LGQPLQHVNAVSPAC-WFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHAS 89
           L +    +  V P   W+ T+Q+ A  I H  + N   RT DP  A LF+VPFY  L   
Sbjct: 12  LPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNSRCRTLDPDEADLFFVPFYTSL--- 68

Query: 90  SKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYGAST 149
                TN   RD L     E+LES P+W R+ G+DH +V                +G S 
Sbjct: 69  --SVGTNAVERDLLPSELVEWLESLPYWNRSGGRDHIIVNSH------------PFGGSA 114

Query: 150 LLNLPRVQNLSVLAI-------ERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKR 202
              LP + N ++LA+       E          +P P+YFHP +   + +    M  SKR
Sbjct: 115 FDRLPALNNNTILAVLAGGGFSEDQFRPGFD--VPLPAYFHPNSVDDLESDG--MPPSKR 170

Query: 203 PHLFSFVGAPR---KGSQRAAIRYELIKQCGES--IRCKLLTCRYGSGASNKCSSPSEIL 257
             L  F G PR   KG+   AIR  LI++C  S   +C+          +  C +P   +
Sbjct: 171 KTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDFQCEG---------NQSCGNPENYM 221

Query: 258 GVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP----QDAEEYS 313
            ++  S+FCL  PGD+ T    FD++ AGCIPV  S         W LP     D  ++S
Sbjct: 222 ELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIIS-------DGWELPFEDVIDWSKFS 274

Query: 314 VYI 316
           V +
Sbjct: 275 VRV 277

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 388
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.83
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.01
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 96.17
cd03814364 GT1_like_2 This family is most closely related to 96.0
cd03822366 GT1_ecORF704_like This family is most closely rela 95.79
cd03794394 GT1_wbuB_like This family is most closely related 95.62
cd03808359 GT1_cap1E_like This family is most closely related 95.36
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 95.19
cd03801374 GT1_YqgM_like This family is most closely related 94.87
cd03809365 GT1_mtfB_like This family is most closely related 94.33
cd04962371 GT1_like_5 This family is most closely related to 94.18
cd03820348 GT1_amsD_like This family is most closely related 94.13
cd03819355 GT1_WavL_like This family is most closely related 94.09
cd03821375 GT1_Bme6_like This family is most closely related 94.07
cd03800398 GT1_Sucrose_synthase This family is most closely r 94.03
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 93.83
cd03807365 GT1_WbnK_like This family is most closely related 93.61
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 93.39
cd03818396 GT1_ExpC_like This family is most closely related 93.24
cd04951360 GT1_WbdM_like This family is most closely related 93.24
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 93.21
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 93.03
cd03798377 GT1_wlbH_like This family is most closely related 92.93
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 92.8
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 92.49
cd04949372 GT1_gtfA_like This family is most closely related 92.31
cd03806419 GT1_ALG11_like This family is most closely related 91.96
cd03823359 GT1_ExpE7_like This family is most closely related 91.11
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 91.0
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 89.87
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 89.86
cd03817374 GT1_UGDG_like This family is most closely related 89.55
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 89.53
cd03825365 GT1_wcfI_like This family is most closely related 88.52
cd04955363 GT1_like_6 This family is most closely related to 87.97
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 87.19
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 87.13
PRK00654466 glgA glycogen synthase; Provisional 87.13
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 87.09
cd03811353 GT1_WabH_like This family is most closely related 86.91
cd03804351 GT1_wbaZ_like This family is most closely related 86.3
cd03813475 GT1_like_3 This family is most closely related to 86.23
PRK14098489 glycogen synthase; Provisional 86.08
cd03802335 GT1_AviGT4_like This family is most closely relate 86.0
cd03805392 GT1_ALG2_like This family is most closely related 84.66
cd03795357 GT1_like_4 This family is most closely related to 83.62
cd03796398 GT1_PIG-A_like This family is most closely related 82.52
cd03816415 GT1_ALG1_like This family is most closely related 81.05
smart00672256 CAP10 Putative lipopolysaccharide-modifying enzyme 80.27
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 80.08
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-64  Score=515.87  Aligned_cols=361  Identities=30%  Similarity=0.536  Sum_probs=314.9

Q ss_pred             CchhchHHHhhcCCCCC-CCCC---CCccccCCCCCCcccccCC----CCCCccccCCCcchhHHHHHHhc--cCCCCCC
Q 016487            1 MPSEFNLGLVKNCHHLN-MHRD---MCPHVANHGLGQPLQHVNA----VSPACWFATNQFTAAMIFHARLE--NHPLRTW   70 (388)
Q Consensus         1 lp~~fn~~ll~~c~~~~-~~~~---~c~~~~n~g~g~~~~~~~~----~~~~~w~~t~~y~~E~~fh~~l~--~s~~rT~   70 (388)
                      ||+.||.+|+..|.... .|.+   +|.+..|.++|+.......    ...++|+.++||++|.+||++++  .++|||.
T Consensus        80 ~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~  159 (464)
T KOG1021|consen   80 LPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTL  159 (464)
T ss_pred             cchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecC
Confidence            68999999999998764 5666   9999999999987765432    12679999999999999999994  7899999


Q ss_pred             CCCCCcEEEEcccccccccccccCC----ChhHHHHHHHHHHHHHhcChhhhccCCCCEEEEccCccccccccCCCCCCC
Q 016487           71 DPSRATLFYVPFYGGLHASSKFRET----NLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYG  146 (388)
Q Consensus        71 dP~eAdlFfVP~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~p~W~R~~GrDH~~v~~~~~w~~~r~~~~~~wg  146 (388)
                      ||++||+||||||++++..++.+.+    +...++.++..++.|++++|||+|++|+|||||++|+.|++.+.   .+| 
T Consensus       160 dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~---~~~-  235 (464)
T KOG1021|consen  160 DPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRR---SDW-  235 (464)
T ss_pred             ChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeec---cch-
Confidence            9999999999999999987775433    33456788899999999999999999999999999999988765   367 


Q ss_pred             CcccccccccccceeeehccCCCCCCceecCCCCCCCCCCCcchhhhhcccCCCCCCceEEeecCCCCCCCchHHHHHHH
Q 016487          147 ASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELI  226 (388)
Q Consensus       147 g~~~~~~~~~~n~t~l~ie~~~~~~~dv~iP~~~~f~p~~~~~~~~w~~~~~~~~R~~L~~F~G~~~~~~~~~~iR~~L~  226 (388)
                      ++.+..++++.|.+.+..+..+|. +|++|||++.+||....+. .|+..++..+|++|++|+|+..    ++.+|+.|+
T Consensus       236 ~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~~----~~~iR~~L~  309 (464)
T KOG1021|consen  236 GASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAPA----GGQIRSILL  309 (464)
T ss_pred             hhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEecccc----CCcHHHHHH
Confidence            677777889999888888888776 9999999999999988777 8998888899999999999962    578999999


Q ss_pred             HHHcc-CCceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCcccccccccc
Q 016487          227 KQCGE-SIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYL  305 (388)
Q Consensus       227 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~l  305 (388)
                      ++|++ .+.+..++|..|.   ..|.++..|.+.|++|+|||||+||+++|+|+||||.+|||||||+|.   .||+|+.
T Consensus       310 ~~~~~~~~~~~~~~~~~g~---~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~~lpf~~  383 (464)
T KOG1021|consen  310 DLWKKDPDTEVFVNCPRGK---VSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---IQLPFGD  383 (464)
T ss_pred             HHhhcCcCccccccCCCCc---cccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---cccCcCC
Confidence            99999 3446778887764   358889999999999999999999999999999999999999999999   5888999


Q ss_pred             CCCCCceEEEEeCCCCCccchH-HHHHcCCCHHHHHHHHHHHhh-hcCceEecC--CCCCCCCCcccHHHHHHHHHHHHH
Q 016487          306 PQDAEEYSVYINGENGNATRRI-EDELMKIPRERVERMRKKVID-LIPRVTYKH--PNASDDGEFEDAVDVAVAALANHV  381 (388)
Q Consensus       306 Pidw~~fsV~i~~~~~~~~~~l-~~~L~~i~~~~~~~mr~~l~~-~~~~~~y~~--~~~~~~~~~~DAf~~~~~~l~~r~  381 (388)
                      |+||++|||+|++ ++++  ++ .++|.+|+.+++.+||+++.+ +.++|.+..  +...     +|||++++++|++|+
T Consensus       384 ~~d~~~fSV~v~~-~~v~--~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~-----~da~~~~~~~v~~r~  455 (464)
T KOG1021|consen  384 VLDWTEFSVFVPE-KDVP--ELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKR-----GDAFHMILHSLWRRL  455 (464)
T ss_pred             CccceEEEEEEEH-HHhh--hHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCc-----chhHHHHHhhhhhcc
Confidence            9999999999997 5888  55 999999999999999999995 888888888  4443     799999999999988


Q ss_pred             hhhh
Q 016487          382 QSVL  385 (388)
Q Consensus       382 ~~~~  385 (388)
                      ..++
T Consensus       456 ~~~~  459 (464)
T KOG1021|consen  456 HKLR  459 (464)
T ss_pred             cccc
Confidence            8654

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query388
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 96.91
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 95.48
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 95.23
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 95.15
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 94.92
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 94.1
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 93.56
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 92.96
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 92.7
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 92.32
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 91.25
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 91.1
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 90.93
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 90.81
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 88.66
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 87.46
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 86.24
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 85.99
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 83.52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=96.91  E-value=0.0017  Score=54.85  Aligned_cols=96  Identities=13%  Similarity=0.163  Sum_probs=62.5

Q ss_pred             hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487          253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM  332 (388)
Q Consensus       253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~  332 (388)
                      ..+..+.|..+..++.|.-.......+.|||.+||||||..+....  . -++ +.-...  .++. .+..  .+.+.|.
T Consensus        65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~--~-~~~-~~~~~~--~~~~-~~~~--~l~~~i~  135 (166)
T 3qhp_A           65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA--T-RQF-ALDERS--LFEP-NNAK--DLSAKID  135 (166)
T ss_dssp             HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG--G-GGG-CSSGGG--EECT-TCHH--HHHHHHH
T ss_pred             HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCc--h-hhh-ccCCce--EEcC-CCHH--HHHHHHH
Confidence            5778999999999999986555566899999999999999543210  0 111 222333  4444 2333  4544444


Q ss_pred             CC--CHHHHHHHHHHHhhhcCceEecC
Q 016487          333 KI--PRERVERMRKKVIDLIPRVTYKH  357 (388)
Q Consensus       333 ~i--~~~~~~~mr~~l~~~~~~~~y~~  357 (388)
                      .+  .++...+|.++..+....|.|..
T Consensus       136 ~l~~~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          136 WWLENKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence            33  67888899988887767776654
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query388
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.91
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 92.19
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 91.92
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 90.86
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 88.68
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 83.82
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.91  E-value=0.0023  Score=60.02  Aligned_cols=129  Identities=15%  Similarity=0.161  Sum_probs=77.5

Q ss_pred             CCCCCCceEEeecCCCCCCCchHHHHHHHHHHccCCceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecC---CCCC
Q 016487          198 RLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAP---GDSF  274 (388)
Q Consensus       198 ~~~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~---Gd~~  274 (388)
                      ....|+.+.+|.-+-.    ++..|..+++.+.....   |++. |......+.....-.+.+.+-+|+|+..   ..+.
T Consensus       175 ~~~~K~kFcs~v~Sn~----~~~~R~~~~~~L~k~~~---Vd~~-G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~Y  246 (349)
T d2nzwa1         175 SDPLKRGFASFVASNP----NAPIRNAFYDALNSIEP---VTGG-GSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGY  246 (349)
T ss_dssp             SCTTSSEEEEECCSCC----CCHHHHHHHHHHTTTSC---CEEC-SSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTC
T ss_pred             cccccCceEEEEEcCC----CCchHHHHHHHHhccCe---eccc-CccccCCCCchhhHHHHHhCCCeEEEECCcCCCCC
Confidence            3466777887775432    35789999999987754   3332 2110011122345578899999999975   3455


Q ss_pred             CcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCCC--HHHHHHHH
Q 016487          275 TRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIP--RERVERMR  343 (388)
Q Consensus       275 ~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i~--~~~~~~mr  343 (388)
                      .+-.|+||+.+|||||..++... .   -.+|  -..| |.+..-....  ++.+.|..|+  ++.+.+|-
T Consensus       247 vTEKi~da~~~g~iPIy~G~~~i-~---~~f~--~~sf-I~~~df~s~~--el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         247 VTEKIIDAYFSHTIPIYWGSPSV-A---KDFN--PKSF-VNVHDFKNFD--EAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             CCTHHHHHHHTTCEEEEESCTTG-G---GTSC--GGGS-EEGGGSSSHH--HHHHHHHHHHTCHHHHHHHH
T ss_pred             cchHHHHHHhCCeEEEEECCCcH-H---HcCC--CccE-EEhhhCCCHH--HHHHHHHHHhcCHHHHHHHH
Confidence            67889999999999999997531 1   1233  2232 2221101233  6777777664  44454443
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure