Citrus Sinensis ID: 016490

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEcccccccccccccccccccccccccccccccccccccccccccEccccccHHHHHHHHHcHHHHHHHcHHHcccHHHcccHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccEEEEEccEEEc
Coil and Loop (DISEMBL)
malklntfsffvprklpysqsyrrsiirtkssppalmcstlgaetkdvvthsmAPEKVEIFKSLETWAEHNVLIhlkpvdkswqptdflpeseaseGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSldgvrdetgaSLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSgmdhkfennpyngfvyASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKrfrmpghlmydgqddktfdHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGltsegrkaqdfvcgLPSRIRRILENKALVDMAEKagsavpfswvfgqeiri
Flexible Loop (DISEMBL)
malklntfsffvprklpysqsyrrsiirtkssppalmCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICgtiasdekrhETAYTKIVeklfeidpdDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVgltsegrkaqdfvcglpsRIRRILENKALVDMAEkagsavpfswvfgqeiri
Low Complexity Region (SEG)
MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI
Disordered region (IsUnstruct)
****LNTFSFFVPRKLPYSQSYRRSII********LMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFL*******GFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQ****
Disordered Region (DISOPRED)
****************************************************MAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRR******************PFSWVFGQEIRI
Disordered Region (DISEMBL)
MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI
Disordered Region (DISPRO)
*********FF*************************************VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q9M879	396	Acyl-[acyl-carrier-protei	yes	no	0.976	0.957	0.672	1e-156
P22337	396	Acyl-[acyl-carrier-protei	N/A	no	0.979	0.959	0.668	1e-155
Q43593	390	Acyl-[acyl-carrier-protei	N/A	no	0.963	0.958	0.675	1e-155
P32061	396	Acyl-[acyl-carrier-protei	N/A	no	0.979	0.959	0.658	1e-154
P22243	396	Acyl-[acyl-carrier-protei	N/A	no	0.909	0.891	0.691	1e-152
P46253	393	Acyl-[acyl-carrier-protei	N/A	no	0.989	0.977	0.657	1e-151
Q41319	393	Acyl-[acyl-carrier-protei	N/A	no	0.865	0.854	0.738	1e-151
Q42807	411	Acyl-[acyl-carrier-protei	yes	no	0.958	0.905	0.658	1e-151
Q01753	398	Acyl-[acyl-carrier-protei	N/A	no	0.984	0.959	0.648	1e-151
O24428	393	Acyl-[acyl-carrier-protei	N/A	no	0.958	0.946	0.656	1e-150

>sp|Q9M879|STAD5_ARATH Acyl-[acyl-carrier-protein] desaturase 5, chloroplastic OS=Arabidopsis thaliana GN=S-ACP-DES5 PE=1 SV=1

 Score =  552 bits (1422), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 271/403 (67%), Positives = 311/403 (77%), Gaps = 24/403 (5%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDV------------ 48
           MA+ ++   F      P S  YR    R   S    M ST+ + T +V            
Sbjct: 1   MAMAMDRIVFS-----PSSYVYRPCQARGSRSSRVSMASTIRSATTEVTNGRKLYIPPRE 55

Query: 49  ----VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
               V HSM P+K+EIFKSLE WA+  +L +LKPV+KSWQPTDFLPE E SEGF++QVKE
Sbjct: 56  VHVQVKHSMPPQKLEIFKSLEGWADETLLTYLKPVEKSWQPTDFLPEPE-SEGFYDQVKE 114

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LRERCK+LP +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS T WA W RAWTAE
Sbjct: 115 LRERCKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAE 174

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYLSGRVDM+QIE++IQYLI SGMD K ENNPY GF+Y SFQERATFIS
Sbjct: 175 ENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFIS 234

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTARL K+ GD+KLAQICGTIA+DE+RHETAYTKIVEKLFEIDPD TIL LA MMKK+
Sbjct: 235 HGNTARLAKDRGDLKLAQICGTIAADERRHETAYTKIVEKLFEIDPDGTILGLADMMKKK 294

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDGQDD  F+HFS V QRLGVYT +DYADILEFL++RW VE L  L+SEG +
Sbjct: 295 ISMPAHLMYDGQDDNLFEHFSTVAQRLGVYTAKDYADILEFLVERWNVETLTDLSSEGHR 354

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIR 387
           AQDFVCGLP+RIR+I E       A++A   +PFSW+FG+ IR
Sbjct: 355 AQDFVCGLPARIRKIEERAQ--GRAKEAAKNIPFSWIFGRNIR 395

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 9EC: .EC: 2

>sp|P22337|STAD_RICCO Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1

 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/404 (66%), Positives = 318/404 (78%), Gaps = 24/404 (5%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDV------------ 48
           MALKLN F     +KLP   S+    + +  SP   M STL + +K+V            
Sbjct: 1   MALKLNPF-LSQTQKLP---SFALPPMASTRSPKFYMASTLKSGSKEVENLKKPFMPPRE 56

Query: 49  ----VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
               VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+E
Sbjct: 57  VHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRE 115

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LRER K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAE
Sbjct: 116 LRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAE 175

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFIS
Sbjct: 176 ENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFIS 235

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTAR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+
Sbjct: 236 HGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKK 295

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+K
Sbjct: 296 ISMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQK 355

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           AQD+VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 356 AQDYVCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 396

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Ricinus communis (taxid: 3988)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|Q43593|STAD_OLEEU Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Olea europaea PE=2 SV=1

 Score =  547 bits (1409), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/404 (67%), Positives = 316/404 (78%), Gaps = 30/404 (7%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDV------------ 48
           MALKL     F P K+P   S+  + IR+       M ST+ + + +V            
Sbjct: 1   MALKL----CFPPHKMP---SFPDARIRSHR---VFMASTIHSPSMEVGKVKKPFTPPRE 50

Query: 49  ----VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
               VTHS+APEK EIF SL  WA+ N+L+ LK VDK WQP+DFLP+S ASEGF EQV E
Sbjct: 51  VHVQVTHSLAPEKREIFNSLNNWAQENILVLLKDVDKCWQPSDFLPDS-ASEGFDEQVME 109

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LR+RCK++P +YF+VLVG+MITEEALPTYQTMLN+LDGVRDETGASLT WA W RAWTAE
Sbjct: 110 LRKRCKEIPDDYFIVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIWTRAWTAE 169

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYLSGRVDMKQIE++IQYLI SGMD + ENNPY GF+Y SFQERATFIS
Sbjct: 170 ENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFIS 229

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTARL KEHGD+KLAQICG IA+DEKRHETAYTKIVEKLFEIDPD T+LALA MM+K+
Sbjct: 230 HGNTARLAKEHGDLKLAQICGIIAADEKRHETAYTKIVEKLFEIDPDGTVLALADMMRKK 289

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDGQDD  F++FS+V QRLGVYT +DYADILEFL+ RW +EKL GL+ EGRK
Sbjct: 290 VSMPAHLMYDGQDDNLFENFSSVAQRLGVYTAKDYADILEFLVGRWDIEKLTGLSGEGRK 349

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           AQD+VC LP RIRR LE +A   +  K  SA PFSW+FG+EI +
Sbjct: 350 AQDYVCTLPPRIRR-LEERAQSRV--KKASATPFSWIFGREINL 390

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Olea europaea (taxid: 4146)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|P32061|STAD_CUCSA Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1

 Score =  544 bits (1401), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/404 (65%), Positives = 316/404 (78%), Gaps = 24/404 (5%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDV------------ 48
           MALK +  +   P KLP   S+R   + +  SP  +M STL + +++V            
Sbjct: 1   MALKFHPLTSQSP-KLP---SFRMPQLASLRSPKFVMASTLRSTSREVETLKKPFMPPRE 56

Query: 49  ----VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
               VTHSM P+K+EIFKSLE WAE N+L+HLKPV++ WQP DFLP+S A EGF EQV+E
Sbjct: 57  VHLQVTHSMPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFLPDS-AFEGFHEQVRE 115

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LRER K+LP EYFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS T WA W RAWTAE
Sbjct: 116 LRERAKELPDEYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAE 175

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYLSGRVDM+Q+E++IQYLI SGMD + ENNPY GF+Y SFQERATFIS
Sbjct: 176 ENRHGDLLNKYLYLSGRVDMRQVEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFIS 235

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTARL KEHGD+KLAQICGTI +DEKRHETAYTKIVEKLFEIDP+ T++A   MM+K+
Sbjct: 236 HGNTARLAKEHGDIKLAQICGTITADEKRHETAYTKIVEKLFEIDPEGTVIAFEEMMRKK 295

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDG+DD  F HFSAV QRLGVYT +DYADILEFL+ RW VE L GL+ EG+K
Sbjct: 296 VSMPAHLMYDGRDDNLFHHFSAVAQRLGVYTAKDYADILEFLVGRWKVESLTGLSGEGQK 355

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           AQD+VC LP+RIR+ LE +A      K G  +PFSW+F +++++
Sbjct: 356 AQDYVCALPARIRK-LEERA--QGRAKEGPTIPFSWIFDRQVKL 396

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Cucumis sativus (taxid: 3659)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|P22243|STAD_CARTI Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1

 Score =  537 bits (1383), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/373 (69%), Positives = 298/373 (79%), Gaps = 20/373 (5%)

Query: 32  SPPALMCSTLGAETKDV----------------VTHSMAPEKVEIFKSLETWAEHNVLIH 75
           SP   M STLG+ T  V                VTHSM P+K+EIFKS+E WAE N+L+H
Sbjct: 28  SPKFAMASTLGSSTPKVDNAKKPFQPPREVHVQVTHSMPPQKIEIFKSIEGWAEQNILVH 87

Query: 76  LKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQT 135
           LKPV+K WQ  DFLP+  ASEGF EQVKELR R K++P +YFVVLVG+MITEEALPTYQT
Sbjct: 88  LKPVEKCWQAQDFLPDP-ASEGFDEQVKELRARAKEIPDDYFVVLVGDMITEEALPTYQT 146

Query: 136 MLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLI 195
           MLN+LDGVRDETGASLT WA W RAWTAEENRHGDLL+ YLYLSGRVDM+QI+++IQYLI
Sbjct: 147 MLNTLDGVRDETGASLTPWAVWTRAWTAEENRHGDLLHTYLYLSGRVDMRQIQKTIQYLI 206

Query: 196 RSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHE 255
            SGMD + EN+PY GF+Y SFQERATF+SHGNTAR  K+HGD+KLAQICGTIASDEKRHE
Sbjct: 207 GSGMDPRTENSPYLGFIYTSFQERATFVSHGNTARHAKDHGDVKLAQICGTIASDEKRHE 266

Query: 256 TAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYT 315
           TAYTKIVEKLFEIDPD T+LA A MM+K+  MP HLMYDG+DD  F+HFSAV QRLGVYT
Sbjct: 267 TAYTKIVEKLFEIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNLFEHFSAVAQRLGVYT 326

Query: 316 GQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSA 375
            +DYADILEFL+ RW V  L GL+ EGRKAQD+VCGLP RIRR LE +A      K G  
Sbjct: 327 AKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRR-LEERA--QGRAKEGPV 383

Query: 376 VPFSWVFGQEIRI 388
           VPFSW+F +++++
Sbjct: 384 VPFSWIFDRQVKL 396

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Carthamus tinctorius (taxid: 4222)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|P46253|STAD_SOLTU Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum tuberosum PE=2 SV=1

 Score =  536 bits (1381), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 261/397 (65%), Positives = 307/397 (77%), Gaps = 13/397 (3%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRS----IIRTKSSPPALMCSTLGA-----ETKDVVTH 51
           MAL +N  S    + LP+  S  RS    +  T   P   + S   A     E    VTH
Sbjct: 1   MALNINGVSLKSHKMLPFPCSSARSERVFMASTIHRPSVEVGSVKKAFTPPREVHVQVTH 60

Query: 52  SMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQ 111
           SM PEK+E+F SL  WA  N+L+HLKPV+K WQPTDFLP+  ASEGF EQVKELRERCK+
Sbjct: 61  SMPPEKIEVFDSLRDWAAQNLLVHLKPVEKCWQPTDFLPDP-ASEGFDEQVKELRERCKE 119

Query: 112 LPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDL 171
           +P +YFVVL+G+MITEEALPTYQTM+N+LDGVRDETGA++T WA W RAWTAEENRHGDL
Sbjct: 120 IPDDYFVVLIGDMITEEALPTYQTMINTLDGVRDETGATVTPWAIWTRAWTAEENRHGDL 179

Query: 172 LNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARL 231
           LNKYLYLSGRVDMKQIE++IQYLI SGMD + ENNPY GFVY S ++  TF+SHGNTARL
Sbjct: 180 LNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENNPYLGFVYTSLRKGVTFVSHGNTARL 239

Query: 232 VKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHL 291
            KEHGDMKLAQICG+IA+DEKRHETAYTKIVEKL E+DPD  +LA+  MM+K   MP HL
Sbjct: 240 AKEHGDMKLAQICGSIAADEKRHETAYTKIVEKLLEVDPDGAVLAIGDMMRKNISMPAHL 299

Query: 292 MYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCG 351
           MYDG+DD  F+HFSAV QRLGVYT +DYADILEF + RW VEKL GL+SEGR+AQD+VCG
Sbjct: 300 MYDGRDDNLFEHFSAVAQRLGVYTAKDYADILEFHVGRWEVEKLTGLSSEGRRAQDYVCG 359

Query: 352 LPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           L  RIR+ LE +A      K   +VPFSW+FG+EI++
Sbjct: 360 LAPRIRK-LEERA--QARAKHAKSVPFSWIFGKEIKL 393

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|Q41319|STAD_SOLCO Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2

 Score =  536 bits (1380), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 291/340 (85%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM PEK EIF SL  WA++N+L+HLKPV+K WQ +DFLP+  ASEGF +QVKELRER
Sbjct: 58  VTHSMPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFLPDP-ASEGFEDQVKELRER 116

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
           CK++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGASLT WA W RAWTAEENRH
Sbjct: 117 CKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIWTRAWTAEENRH 176

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + ENNPY GF+Y SFQERATFISHGNT
Sbjct: 177 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNT 236

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGDMKLAQ+CG IA+DEKRHETAYTKIVEKLFE+DPD T+LA+A MM+K+  MP
Sbjct: 237 ARHAKEHGDMKLAQVCGIIAADEKRHETAYTKIVEKLFEVDPDGTVLAVADMMRKKISMP 296

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  F+HFS V QRLGVYT +DYADILEFL+ RW +EKL GL+ EG KA+D+
Sbjct: 297 AHLMYDGRDDNLFEHFSTVAQRLGVYTAKDYADILEFLVGRWEIEKLTGLSGEGHKARDY 356

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VCGL  RIR+ LE +A     +KA   VPFSWVFG++I++
Sbjct: 357 VCGLAPRIRK-LEERAQARAKQKA--PVPFSWVFGKDIKL 393

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Solanum commersonii (taxid: 4109)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|Q42807|STAD_SOYBN Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1

 Score =  534 bits (1375), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/401 (65%), Positives = 313/401 (78%), Gaps = 29/401 (7%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDV------------ 48
           MAL+LN     +P     +Q++    + +  SP   M STL + +K+V            
Sbjct: 1   MALRLNP----IP-----TQTFSLPQMASLRSPRFRMASTLRSGSKEVENIKKPFTPPRE 51

Query: 49  ----VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
               VTHSM P+K+EIF+SLE WAE N+L HLKPV+K WQP DFLP+  +S+GF EQVKE
Sbjct: 52  VHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDP-SSDGFEEQVKE 110

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LRER K+LP +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGASLTSWA W RAWTAE
Sbjct: 111 LRERAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAE 170

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYLSGRVDMKQIE++IQYLI SGMD + EN+PY GF+Y SFQERATFIS
Sbjct: 171 ENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFIS 230

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTARL KEHGD+KLAQICG IASDEKRHETAYTKIVEKLFE DPD T++A A MM+K+
Sbjct: 231 HGNTARLAKEHGDIKLAQICGMIASDEKRHETAYTKIVEKLFESDPDGTVMAFADMMRKK 290

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDG+DD  FD++S+V QR+GVYT +DYADILEFL+ RW VE+L GL+ EGRK
Sbjct: 291 IAMPAHLMYDGRDDNLFDNYSSVAQRIGVYTAKDYADILEFLVGRWKVEQLTGLSGEGRK 350

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQE 385
           AQ+++CGLP RIRR LE +A   + E   S + FSW+  +E
Sbjct: 351 AQEYICGLPPRIRR-LEERAQARVKE--SSTLKFSWIHDRE 388

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|Q01753|STAD_SIMCH Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Simmondsia chinensis PE=2 SV=1

 Score =  533 bits (1373), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/404 (64%), Positives = 310/404 (76%), Gaps = 22/404 (5%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETKDVV----------- 49
           MALKL+  + F P     S    RS    +S    +  ST+G  +K++            
Sbjct: 1   MALKLH-HTAFNPSMAVTSSGLPRSY-HLRSHRVFMASSTIGITSKEIPNAKKPHMPPRE 58

Query: 50  -----THSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKE 104
                THSM P+K+EIFKSLE WAE NVL+HLKPV+K WQP DFLP+  ASEGF +QVKE
Sbjct: 59  AHVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDP-ASEGFMDQVKE 117

Query: 105 LRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAE 164
           LRER K++P EY VVLVG+MITEEALPTYQTMLN+LDGVRDETGASLTSWA W RAWTAE
Sbjct: 118 LRERTKEIPDEYLVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAE 177

Query: 165 ENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS 224
           ENRHGDLLNKYLYL+GRVDMKQIE++IQYLI SGMD + ENNPY GF+Y SFQERATFIS
Sbjct: 178 ENRHGDLLNKYLYLTGRVDMKQIEKTIQYLIGSGMDPRSENNPYLGFIYTSFQERATFIS 237

Query: 225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR 284
           HGNTARL K+HGD +LAQ+CG IA+DEKRHETAYTKIVEKLFEIDPD  +LALA MM+K+
Sbjct: 238 HGNTARLAKDHGDFQLAQVCGIIAADEKRHETAYTKIVEKLFEIDPDGAVLALADMMRKK 297

Query: 285 FRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRK 344
             MP HLMYDG+DD  F+++SAV Q++GVYT +DYADILE L+ RW VE L+GL+ EG K
Sbjct: 298 VSMPAHLMYDGKDDNLFENYSAVAQQIGVYTAKDYADILEHLVNRWKVENLMGLSGEGHK 357

Query: 345 AQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           AQDFVCGL  RIR++ E    +    K  S VPFSW+F +E+++
Sbjct: 358 AQDFVCGLAPRIRKLGERAQSLS---KPVSLVPFSWIFNKELKV 398

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Simmondsia chinensis (taxid: 3999)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

>sp|O24428|STAD_ELAGV Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2

 Score =  533 bits (1372), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/405 (65%), Positives = 308/405 (76%), Gaps = 33/405 (8%)

Query: 1   MALKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGAETK------------DV 48
           +A +   F  F P K            R+  SP   M ST+G  TK            +V
Sbjct: 5   VAFRPEAFLCFSPPK----------TTRSTRSPRISMASTVGPSTKVEIPKKPFMPPREV 54

Query: 49  ---VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKEL 105
              VTHSM P+K+EIFKSLE WAE+N+L+HLKPV+K WQP DFLP+  +SEGF E+VKEL
Sbjct: 55  HVQVTHSMPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFLPDP-SSEGFHEEVKEL 113

Query: 106 RERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEE 165
           RER K++P  Y+V LVG+MITEEALPTYQTMLN+LDGVRDETGASLTSWA W RAWTAEE
Sbjct: 114 RERSKEIPDGYYVCLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAVWTRAWTAEE 173

Query: 166 NRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISH 225
           NRHGDLLNKYLYLSGRVDMKQIE++IQYLI SGMD + EN+PY GF+Y SFQERATFISH
Sbjct: 174 NRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISH 233

Query: 226 GNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRF 285
           GNTAR  KEHGD+KLAQICGTIASDEKRHETAYTKIVEKLFEIDPD T+L+ A MMKK+ 
Sbjct: 234 GNTARHAKEHGDVKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDGTVLSFADMMKKKI 293

Query: 286 RMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKA 345
            MP HLMYDGQDD  F+HFSAV QRLGV T +DYADILEFLI RW V +L G + EG++A
Sbjct: 294 SMPAHLMYDGQDDNLFEHFSAVAQRLGVDTAKDYADILEFLINRWKVGELTGFSGEGKRA 353

Query: 346 QDFVCGLPSRIRRILENKALVDMAEKAGSA--VPFSWVFGQEIRI 388
           QDFVC L  RIRRI E        E+A  A  +P SW++G+E+++
Sbjct: 354 QDFVCTLAPRIRRIEER-----AQERAKQAPRIPCSWIYGREVQL 393

Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.

Elaeis guineensis var. tenera (taxid: 51953)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 2

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2076969	396	AT3G02630 [Arabidopsis thalian	0.865	0.848	0.761	1.5e-140
TAIR|locus:2043899	401	SSI2 "AT2G43710" [Arabidopsis	0.989	0.957	0.644	6e-135
TAIR|locus:2181437	394	AT5G16240 [Arabidopsis thalian	0.943	0.928	0.674	6.9e-134
TAIR|locus:2181427	401	AT5G16230 [Arabidopsis thalian	0.886	0.857	0.664	7.6e-128
TAIR|locus:2029142	391	FTM1 "FLORAL TRANSITION AT THE	0.868	0.861	0.65	4.4e-116
UNIPROTKB|E3PZS2	376	SAD2 "Acyl-[acyl-carrier-prote	0.832	0.859	0.517	2.1e-93
UNIPROTKB|Q50824	338	desA1 "Putative acyl-[acyl-car	0.701	0.804	0.285	1.1e-23
UNIPROTKB|O53442	275	desA2 "Putative acyl-[acyl-car	0.309	0.436	0.301	1.1e-07

TAIR|locus:2076969 AT3G02630 [Arabidopsis thaliana (taxid:3702)]

 Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
 Identities = 258/339 (76%), Positives = 293/339 (86%)

Query:    49 VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
             V HSM P+K+EIFKSLE WA+  +L +LKPV+KSWQPTDFLPE E SEGF++QVKELRER
Sbjct:    60 VKHSMPPQKLEIFKSLEGWADETLLTYLKPVEKSWQPTDFLPEPE-SEGFYDQVKELRER 118

Query:   109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
             CK+LP +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS T WA W RAWTAEENRH
Sbjct:   119 CKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAEENRH 178

Query:   169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
             GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD K ENNPY GF+Y SFQERATFISHGNT
Sbjct:   179 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNT 238

Query:   229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
             ARL K+ GD+KLAQICGTIA+DE+RHETAYTKIVEKLFEIDPD TIL LA MMKK+  MP
Sbjct:   239 ARLAKDRGDLKLAQICGTIAADERRHETAYTKIVEKLFEIDPDGTILGLADMMKKKISMP 298

Query:   289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
              HLMYDGQDD  F+HFS V QRLGVYT +DYADILEFL++RW VE L  L+SEG +AQDF
Sbjct:   299 AHLMYDGQDDNLFEHFSTVAQRLGVYTAKDYADILEFLVERWNVETLTDLSSEGHRAQDF 358

Query:   349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIR 387
             VCGLP+RIR+I E +A    A++A   +PFSW+FG+ IR
Sbjct:   359 VCGLPARIRKI-EERAQ-GRAKEAAKNIPFSWIFGRNIR 395

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2043899 SSI2 "AT2G43710" [Arabidopsis thaliana (taxid:3702)]

 Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
 Identities = 261/405 (64%), Positives = 311/405 (76%)

Query:     1 MALKLNTFSFFVPRKLPYSQ-----SYRR-SIIRTKSSPPALMCSTLGAET--------K 46
             MALK N      P K P S      S+R    +   SS PAL       E+        +
Sbjct:     1 MALKFNPLVASQPYKFPSSTRPPTPSFRSPKFLCLASSSPALSSGPKSVESLKKPFTPPR 60

Query:    47 DV---VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVK 103
             +V   V HSM P+K+EIFKS+E WAE N+LIHLK V+KSWQP DFLP+  AS+GF +QV+
Sbjct:    61 EVHVQVLHSMPPQKIEIFKSMENWAEENLLIHLKDVEKSWQPQDFLPDP-ASDGFEDQVR 119

Query:   104 ELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTA 163
             ELRER ++LP +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTA
Sbjct:   120 ELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTA 179

Query:   164 EENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFI 223
             EENRHGDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + ENNPY GF+Y SFQERATFI
Sbjct:   180 EENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFI 239

Query:   224 SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKK 283
             SHGNTAR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T++A A MM+K
Sbjct:   240 SHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVMAFADMMRK 299

Query:   284 RFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGR 343
             +  MP HLMYDG++D  FD+FS+V QRLGVYT +DYADILEFL+ RW ++ L GL+ EG 
Sbjct:   300 KISMPAHLMYDGRNDNLFDNFSSVAQRLGVYTAKDYADILEFLVGRWKIQDLTGLSGEGN 359

Query:   344 KAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
             KAQD++CGL  RI+R L+ +A      K G  +PFSW+  +E+++
Sbjct:   360 KAQDYLCGLAPRIKR-LDERA--QARAKKGPKIPFSWIHDREVQL 401

GO:0004768 "stearoyl-CoA 9-desaturase activity" evidence=IDA;IMP

GO:0006631 "fatty acid metabolic process" evidence=IEA;IDA;IMP

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006952 "defense response" evidence=IMP

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS

GO:0008610 "lipid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA;TAS

GO:2000022 "regulation of jasmonic acid mediated signaling pathway" evidence=TAS

GO:2000031 "regulation of salicylic acid mediated signaling pathway" evidence=TAS

GO:0051607 "defense response to virus" evidence=IEP;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0002213 "defense response to insect" evidence=IMP

GO:0009536 "plastid" evidence=TAS

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2181437 AT5G16240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
 Identities = 249/369 (67%), Positives = 298/369 (80%)

Query:    19 SQSYRRSIIRTKSSPPALMCSTLGAETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKP 78
             S+S R   IR+ S+           E    V +SM P+K+EIFKSLE WA  N+L +LKP
Sbjct:    28 SKSSRVFTIRSDSTAVGRKLYIPPREVHLQVKYSMPPQKLEIFKSLEGWANDNLLAYLKP 87

Query:    79 VDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLN 138
             V+KSWQPTDFLPE E SEGF++QVKELRERCK+L  +Y +VLVG+MITEEALPTYQTM+N
Sbjct:    88 VEKSWQPTDFLPEPE-SEGFYDQVKELRERCKELSDDYLIVLVGDMITEEALPTYQTMIN 146

Query:   139 SLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSG 198
             +LDGVRDETGAS T WA W RAWTAEENRHGDLLNKYLYLSGRVDM+QIE++IQYLI SG
Sbjct:   147 TLDGVRDETGASPTPWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSG 206

Query:   199 MDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAY 258
             MD K ENNPY GF+Y SFQERATFISHGNTARL K+ GD+ L +ICGTIA+DE+RHE AY
Sbjct:   207 MDPKTENNPYLGFIYTSFQERATFISHGNTARLAKDLGDLTLGKICGTIAADERRHEHAY 266

Query:   259 TKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQD 318
             TKIVEKLFEIDPD T++  A MM+K+  MP HLMYDG+DD  FDHFS+V QRLGVYT +D
Sbjct:   267 TKIVEKLFEIDPDTTVVGFADMMRKKISMPAHLMYDGRDDNLFDHFSSVAQRLGVYTAKD 326

Query:   319 YADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPF 378
             YADIL+ L++RW VEKL  L+SEG +AQD++CGLP+RIR+ LE +A     ++A   +PF
Sbjct:   327 YADILQHLVERWNVEKLSDLSSEGNRAQDYLCGLPARIRK-LEERAQ-GRTKEAAKNIPF 384

Query:   379 SWVFGQEIR 387
             SW+FG+E+R
Sbjct:   385 SWIFGREVR 393

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2181427 AT5G16230 [Arabidopsis thaliana (taxid:3702)]

 Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
 Identities = 230/346 (66%), Positives = 287/346 (82%)

Query:    44 ETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVK 103
             E  + +TH++  EK+EIFKS+E WAE  +L +LKPV+ SWQP DFLP  E  + F+++VK
Sbjct:    57 EVNNQLTHTIPQEKLEIFKSMENWAEQKLLPYLKPVEDSWQPQDFLPAPENDDEFYDRVK 116

Query:   104 ELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTA 163
             E+RER K++P +YFVVLVG+MITEEALPTYQT LN+LDGV+DETG SL+ WA WIRAWTA
Sbjct:   117 EIRERTKEIPDDYFVVLVGDMITEEALPTYQTTLNTLDGVKDETGGSLSPWAVWIRAWTA 176

Query:   164 EENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFI 223
             EENRHGDLLNKYLYL+GRVDM+ +E++IQYLI SGMD KFENNPYNGF+Y SFQERATFI
Sbjct:   177 EENRHGDLLNKYLYLTGRVDMRHVEKTIQYLIGSGMDSKFENNPYNGFIYTSFQERATFI 236

Query:   224 SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKK 283
             SHGNTARL   +GD+ LA+ICGTIA+DEKRHETAYTKIVEKLFEIDPD ++ ALA MMKK
Sbjct:   237 SHGNTARLATTYGDVTLAKICGTIAADEKRHETAYTKIVEKLFEIDPDGSVQALASMMKK 296

Query:   284 RFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKL-VGLTSEG 342
             R  MP HLM+DG+D+  FDH++AV QR+GVYT  DYA ILEFL++RW VE L +GL+ EG
Sbjct:   297 RITMPAHLMHDGRDNDLFDHYAAVAQRIGVYTAADYAGILEFLLRRWKVESLGLGLSGEG 356

Query:   343 RKAQDFVCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
             R+AQ+++C LP RI+R LE +A   +   +  +V FSWVFG+++++
Sbjct:   357 RRAQEYLCTLPQRIKR-LEERANDRVKLVSKPSVSFSWVFGRDVKL 401

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2029142 FTM1 "FLORAL TRANSITION AT THE MERISTEM1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
 Identities = 221/340 (65%), Positives = 262/340 (77%)

Query:    51 HSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEA--SEGFFEQVKELRER 108
             H+M PEK+EIFKSL+ WA+  +L  LKPVD+ WQP  FLP+     SE F +QV+ELRER
Sbjct:    53 HTMPPEKMEIFKSLDGWAKDQILPLLKPVDQCWQPASFLPDPALPFSE-FTDQVRELRER 111

Query:   109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
                LP EYFVVLVG+MITE+ALPTYQTM+N+LDGVRDETGAS ++WA+W RAWTAEENRH
Sbjct:   112 TASLPDEYFVVLVGDMITEDALPTYQTMINTLDGVRDETGASESAWASWTRAWTAEENRH 171

Query:   169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
             GDLL  YLYLSGRVDM  +ER++Q+LI SGMD   ENNPY GFVY SFQERATF+SHGNT
Sbjct:   172 GDLLRTYLYLSGRVDMLMVERTVQHLIGSGMDPGTENNPYLGFVYTSFQERATFVSHGNT 231

Query:   229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
             ARL K  GD  LA+ICGTIA+DEKRHE AY +IVEKL EIDP+  + A+A MM+K+  MP
Sbjct:   232 ARLAKSAGDPVLARICGTIAADEKRHENAYVRIVEKLLEIDPNGAVSAVADMMRKKITMP 291

Query:   289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
              HLM DG+D   F+HFSAV QRL VYT  DYADILEFL+ RW +EKL GLT EG++AQ+F
Sbjct:   292 AHLMTDGRDPMLFEHFSAVAQRLEVYTADDYADILEFLVGRWRLEKLEGLTGEGQRAQEF 351

Query:   349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
             VCGL  RIRR+ E         K    V FSW+F ++I +
Sbjct:   352 VCGLAQRIRRLQERADERAKKLKKTHEVCFSWIFDKQISV 391

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

UNIPROTKB|E3PZS2 SAD2 "Acyl-[acyl-carrier-protein] desaturase 2, chloroplastic" [Ophrys sphegodes (taxid:145953)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 174/336 (51%), Positives = 244/336 (72%)

Query:    59 EIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESE--ASEGFFEQVKELRERCKQLPAEY 116
             E F+SL++W EHN+L  LKPV+K WQP DFLP+    ++E   + V+E+ ER  ++P E 
Sbjct:    44 EKFRSLDSWVEHNMLTFLKPVEKCWQPQDFLPDPSHLSAEELGDAVREIHERAAEIPDEV 103

Query:   117 FVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYL 176
             +V +VG M+TEEALPTYQ++++S+ G    T A  T W  WIR W+AEENRHGDLLNKYL
Sbjct:   104 WVCMVGNMVTEEALPTYQSLISSVLG---GTVAGSTPWDRWIRGWSAEENRHGDLLNKYL 160

Query:   177 YLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHG 236
             YL+GR+DM+Q+E++IQYLI SGMD    N+   GF+Y  FQE+ATFISHGNTARL K HG
Sbjct:   161 YLTGRLDMRQVEKTIQYLIGSGMDVGVGNSILCGFIYTCFQEKATFISHGNTARLAKHHG 220

Query:   237 DMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQ 296
             D  LA+ICG +A+DEKRH  AYT +++KLFE+ P++++LA A +M+    MP   M+DG+
Sbjct:   221 DTTLAKICGLVAADEKRHAVAYTNLMKKLFEVAPNESMLAFAHIMRAHVTMPASRMFDGR 280

Query:   297 DDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVG-LTSEGRKAQDFVCGLPSR 355
             D + F HFSAVTQ++GVYT +DY ++L+F +K W +  +V  L+ EGR+AQ++VCGLP  
Sbjct:   281 DPRLFTHFSAVTQKIGVYTVRDYGEMLDFFLKEWEISAVVDDLSPEGRQAQEYVCGLPEV 340

Query:   356 IRRILEN-----KALVDMAEKAGSAVPFSWVFGQEI 386
             + ++ E      K LV++ E     +PFSW+F +++
Sbjct:   341 MGKMAERADDRRKKLVNVGEPR--YIPFSWIFNKQV 374

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IDA

GO:0045300 "acyl-[acyl-carrier-protein

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|Q50824 desA1 "Putative acyl-[acyl-carrier-protein] desaturase desA1" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 85/298 (28%), Positives = 143/298 (47%)

Query:    58 VEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYF 117
             +++   LE   E  +  HL  + K W P D++P S+    +    ++      +L     
Sbjct:     8 LQLLHELEPVVEKYLNRHLS-MHKPWNPHDYIPWSDGKNYYALGGQDWDPDQSKLSDVAQ 66

Query:   118 VVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY 177
             V +V  ++TE+ LP+Y   +    G+ D  GA    W  W+  WTAEENRHG  L  YL 
Sbjct:    67 VAMVQNLVTEDNLPSYHREIAMNMGM-D--GA----WGQWVNRWTAEENRHGIALRDYLV 119

Query:   178 LSGRVDMKQIER-SIQYLIRS---GMDHK---FENNPYNGFVYASFQERATFISHGNTAR 230
             ++  VD  ++E+  ++ + R    G +H+   F  +  +  +Y SFQE AT ISH NT  
Sbjct:   120 VTRSVDPVELEKLRLEVVNRGFSPGQNHQGHYFAESLTDSVLYVSFQELATRISHRNTG- 178

Query:   231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGH 290
               K   D    Q+   I++DE  H   Y  + E  F++ P+  + +L  ++   F+MPG 
Sbjct:   179 --KACNDPVADQLMAKISADENLHMIFYRDVSEAAFDLVPNQAMKSLH-LILSHFQMPGF 235

Query:   291 LMYDGQDDKTFDHFSAVTQRLGVYTGQDYAD-ILEFLIKRWGVEKLVGLTSEGRKAQD 347
              + +      F   + V    GVY  + + D ++  ++K+W + +    T EG K +D
Sbjct:   236 QVPE------FRRKAVVIAVGGVYDPRIHLDEVVMPVLKKWRIFEREDFTGEGAKLRD 287

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0052572 "response to host immune response" evidence=IEP

UNIPROTKB|O53442 desA2 "Putative acyl-[acyl-carrier-protein] desaturase desA2" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 38/126 (30%), Positives = 61/126 (48%)

Query:   154 WATWIRAWTAEENRHGDLLNKYLYLSGRVD-MKQIERSIQYLIRSGMDHKFENNPYNGFV 212
             W  W+  WTAEE+ H   L +YL ++  VD +   +  +Q++++     K+        V
Sbjct:    96 WGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQ--VETLV 153

Query:   213 YASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD 272
             Y +F ER   +   N A  ++E     LA +   IA DE RHE  +  +V    +   D+
Sbjct:   154 YMAFYERCGAVFCRNLAAQIEEP---ILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDE 210

Query:   273 TILALA 278
             TI A+A
Sbjct:   211 TIAAIA 216


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      388       388   0.00093  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  264 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.86u 0.14s 32.00t   Elapsed:  00:00:01
  Total cpu time:  31.86u 0.14s 32.00t   Elapsed:  00:00:01
  Start:  Sat May 11 10:26:59 2013   End:  Sat May 11 10:27:00 2013

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046872 "metal ion binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2YS76	STAD7_ORYSI	1, ., 1, 4, ., 1, 9, ., 2	0.5335	0.8685	0.8341	N/A	no
P29108	STAD_BRANA	1, ., 1, 4, ., 1, 9, ., 2	0.6314	0.9768	0.9522	N/A	no
Q96456	STAD_HELAN	1, ., 1, 4, ., 1, 9, ., 2	0.6212	0.9793	0.9595	N/A	no
Q01771	STADS_BRANA	1, ., 1, 4, ., 1, 9, ., 2	0.7088	0.8659	0.8421	N/A	no
P22337	STAD_RICCO	1, ., 1, 4, ., 1, 9, ., 2	0.6683	0.9793	0.9595	N/A	no
Q01753	STAD_SIMCH	1, ., 1, 4, ., 1, 9, ., 2	0.6485	0.9845	0.9597	N/A	no
P46253	STAD_SOLTU	1, ., 1, 4, ., 1, 9, ., 2	0.6574	0.9896	0.9770	N/A	no
A2WYF4	STAD2_ORYSI	1, ., 1, 4, ., 1, 9, ., 2	0.7176	0.8659	0.8484	N/A	no
E3PZS3	STAD2_OPHAA	1, ., 1, 4, ., 1, 9, ., 2	0.5177	0.8376	0.8643	N/A	no
Q42770	STAD_GOSHI	1, ., 1, 4, ., 1, 9, ., 2	0.6336	0.9819	0.9596	N/A	no
Q8S059	STAD2_ORYSJ	1, ., 1, 4, ., 1, 9, ., 2	0.7176	0.8659	0.8484	yes	no
E3PZR9	STAD3_OPHSP	1, ., 1, 4, ., 1, 9, ., 2	0.6330	0.9793	0.9547	N/A	no
Q42807	STAD_SOYBN	1, ., 1, 4, ., 1, 9, ., 2	0.6583	0.9587	0.9051	yes	no
B8AIC3	STAD3_ORYSI	1, ., 1, 4, ., 1, 9, ., 2	0.5373	0.9819	0.9477	N/A	no
Q41319	STAD_SOLCO	1, ., 1, 4, ., 1, 9, ., 2	0.7382	0.8659	0.8549	N/A	no
A2XSL4	STAD5_ORYSI	1, ., 1, 4, ., 1, 9, ., 2	0.6970	0.8659	0.8593	N/A	no
P28645	STAD_SPIOL	1, ., 1, 4, ., 1, 9, ., 2	0.6477	0.9819	0.9548	N/A	no
B8A7A3	STAD1_ORYSI	1, ., 1, 4, ., 1, 9, ., 2	0.65	0.8634	0.8792	N/A	no
P22243	STAD_CARTI	1, ., 1, 4, ., 1, 9, ., 2	0.6916	0.9097	0.8914	N/A	no
Q9LF04	STAD1_ARATH	1, ., 1, 4, ., 1, 9, ., 2	0.7168	0.8659	0.8527	no	no
O24428	STAD_ELAGV	1, ., 1, 4, ., 1, 9, ., 2	0.6567	0.9587	0.9465	N/A	no
Q9M879	STAD5_ARATH	1, ., 1, 4, ., 1, 9, ., 2	0.6724	0.9768	0.9570	yes	no
E3PZS1	STAD1_OPHSP	1, ., 1, 4, ., 1, 9, ., 2	0.5172	0.8582	0.8809	N/A	no
E3PZS0	STAD3_OPHAA	1, ., 1, 4, ., 1, 9, ., 2	0.6330	0.9793	0.9547	N/A	no
E3PZS2	STAD2_OPHSP	1, ., 1, 4, ., 1, 9, ., 2	0.5147	0.8376	0.8643	N/A	no
P32061	STAD_CUCSA	1, ., 1, 4, ., 1, 9, ., 2	0.6584	0.9793	0.9595	N/A	no
P32063	STAD_CORSA	1, ., 1, 4, ., 1, 9, ., 2	0.5765	0.9819	0.9896	N/A	no
P32062	STAD_LINUS	1, ., 1, 4, ., 1, 9, ., 2	0.6482	0.9845	0.9646	N/A	no
Q43593	STAD_OLEEU	1, ., 1, 4, ., 1, 9, ., 2	0.6757	0.9639	0.9589	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.19	0.976
4th Layer	1.14.19.2	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
PLN00179	390	PLN00179, PLN00179, acyl- [acyl-carrier protein] d	0.0
pfam03405	330	pfam03405, FA_desaturase_2, Fatty acid desaturase	0.0
cd01050	297	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferr	1e-168
cd00657	130	cd00657, Ferritin_like, Ferritin-like superfamily	4e-06

>gnl|CDD|215091 PLN00179, PLN00179, acyl- [acyl-carrier protein] desaturase

 Score =  674 bits (1742), Expect = 0.0
 Identities = 265/393 (67%), Positives = 305/393 (77%), Gaps = 10/393 (2%)

Query: 3   LKLNTFSFFVPRKLPYSQSYRRSIIRTKSSPPALMCSTLGA-------ETKDVVTHSMAP 55
           LKLN  +   P   P ++   R   R+ SS                  E    VTHSM P
Sbjct: 1   LKLNPLAAQ-PSPPPAARLRPRRSTRSSSSSVVAARVEAAKKPFAPPREVHVQVTHSMPP 59

Query: 56  EKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAE 115
           EK+EIFKSLE WAE N+L  LKPV+KSWQP DFLP+  ASEGF++QVKELRER  +LP +
Sbjct: 60  EKLEIFKSLEGWAEENLLPLLKPVEKSWQPQDFLPDP-ASEGFYDQVKELRERAAELPDD 118

Query: 116 YFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKY 175
           YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS T WA W RAWTAEENRHGDLLNKY
Sbjct: 119 YFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASATPWARWTRAWTAEENRHGDLLNKY 178

Query: 176 LYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEH 235
           LYLSGRVDM+QIE++IQYLI SGMD K ENNPY GF+Y SFQERATFISHGNTARL KEH
Sbjct: 179 LYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKEH 238

Query: 236 GDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDG 295
           GD KLA+ICGTIA+DEKRHETAYT+IVEKLFEIDPD  +LA A MM+K+  MP HLMYDG
Sbjct: 239 GDAKLAKICGTIAADEKRHETAYTRIVEKLFEIDPDGAVLAFADMMRKKITMPAHLMYDG 298

Query: 296 QDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSR 355
           +DD  FDHFSAV QRLGVYT +DYADILE L++RW VE+L GL+ EGR+AQD+VCGLP R
Sbjct: 299 RDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEELTGLSGEGRRAQDYVCGLPPR 358

Query: 356 IRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           IRR LE +A     +    ++PFSW+F +E+R+
Sbjct: 359 IRR-LEERAQDRAKKAKPPSIPFSWIFDREVRL 390

Length = 390

>gnl|CDD|217538 pfam03405, FA_desaturase_2, Fatty acid desaturase

 Score =  592 bits (1527), Expect = 0.0
 Identities = 252/333 (75%), Positives = 285/333 (85%), Gaps = 3/333 (0%)

Query: 54  APEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLP 113
            PEK+EIFKSLE WAE N+L HLKPV+KSWQP DFLP+  +S+GF+EQVKELRER K+LP
Sbjct: 1   PPEKIEIFKSLEGWAEKNILPHLKPVEKSWQPQDFLPDP-SSDGFYEQVKELRERTKELP 59

Query: 114 AEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLN 173
            EYFVVLVG+MITEEALPTYQTM+N+LDGVRDETGAS T WA W RAWTAEENRHGDLLN
Sbjct: 60  DEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLN 119

Query: 174 KYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVK 233
           KYLYLSGRVDM+QIE++IQYLI SGMD   ENNPY GF+Y SFQERATFISHGNTARL K
Sbjct: 120 KYLYLSGRVDMRQIEKTIQYLIGSGMDPGTENNPYLGFIYTSFQERATFISHGNTARLAK 179

Query: 234 EHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMY 293
           EHGD KLAQICGTIASDEKRHETAYTKIVEKLFE+DPD T+LALA MM+K+  MP HLMY
Sbjct: 180 EHGDTKLAQICGTIASDEKRHETAYTKIVEKLFELDPDGTVLALADMMRKKISMPAHLMY 239

Query: 294 DGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLP 353
           DG+D   FDHFSAV QRLGVYT +DYADILEFL+ RW VEKL GL+ EGR+AQD+VCGL 
Sbjct: 240 DGRDPNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWRVEKLTGLSGEGRRAQDYVCGLA 299

Query: 354 SRIRRILENKALVDMAEKAGSAVPFSWVFGQEI 386
            RIRR+ E     + A++A   VPFSW+F +++
Sbjct: 300 PRIRRLEERAQ--ERAKRAAPPVPFSWIFDRKV 330

Length = 330

>gnl|CDD|153109 cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain

 Score =  471 bits (1214), Expect = e-168
 Identities = 182/306 (59%), Positives = 221/306 (72%), Gaps = 11/306 (3%)

Query: 56  EKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAE 115
            K+E+ +SLE   E N+L  LKPV+K WQP DFLP+S ASE F   VKELRER  +LP +
Sbjct: 1   TKLELLRSLEPVVEENLLNRLKPVEKDWQPHDFLPDS-ASEDFDLDVKELRERAAELPDD 59

Query: 116 YFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKY 175
             V LVG ++TEEALPTY +MLN L G+ DE   S T+WA W+R WTAEENRHGDLLNKY
Sbjct: 60  ARVALVGNLLTEEALPTYHSMLNRLFGLDDE---SPTAWARWVRRWTAEENRHGDLLNKY 116

Query: 176 LYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEH 235
           LYL+GRVD + +ER+ QYLI SG D   +N+PY GFVY SFQE AT ISH NTARL    
Sbjct: 117 LYLTGRVDPRALERTRQYLIGSGFDPGTDNSPYRGFVYTSFQELATRISHRNTARLAG-A 175

Query: 236 GDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDG 295
           GD  LA++ G IA+DE RHE  Y  IVE LFE+DPD  +LA A MM+K   MPGHLMY  
Sbjct: 176 GDPVLAKLLGRIAADEARHEAFYRDIVEALFELDPDGAVLAFADMMRK-IVMPGHLMYPL 234

Query: 296 QDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSR 355
                F+ F+AV  R GVYT +DY DILE L++RW VE+L GL+ EGRKAQ+++C LP+R
Sbjct: 235 -----FERFAAVAARAGVYTARDYDDILEPLVRRWRVEELTGLSGEGRKAQEYLCALPAR 289

Query: 356 IRRILE 361
           +RR+ E
Sbjct: 290 LRRLAE 295

Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD. Length = 297

>gnl|CDD|153097 cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 149 ASLTSWATWIRAWTAEENRHGDLLNKYL-YLSGRVDMKQIERSIQYLIRSGMDHKFENNP 207
           A        +     EE RH D L + L  L G   +        +L+ +    K  ++P
Sbjct: 24  APDPDLKDELLEIADEERRHADALAERLRELGGTPPLP-----PAHLLAAYALPKTSDDP 78

Query: 208 YNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKI 261
                 A   E     ++        +     L ++   I +DE+RH   + K+
Sbjct: 79  AEALRAALEVEARAIAAYRELIEQADDPE---LRRLLERILADEQRHAAWFRKL 129

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF). Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
PLN00179	390	acyl- [acyl-carrier protein] desaturase	100.0
PF03405	330	FA_desaturase_2: Fatty acid desaturase; InterPro:	100.0
cd01050	297	Acyl_ACP_Desat Acyl ACP desaturase, ferritin-like	100.0
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	98.85
PF11583	304	AurF: P-aminobenzoate N-oxygenase AurF; PDB: 3CHI_	97.96
cd01049	288	RNRR2 Ribonucleotide Reductase, R2/beta subunit, f	97.5
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	97.25
cd01055	156	Nonheme_Ferritin nonheme-containing ferritins. Non	97.13
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	96.96
PF00268	281	Ribonuc_red_sm: Ribonucleotide reductase, small ch	96.92
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	96.82
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	96.75
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	96.68
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	96.62
PF00210	142	Ferritin: Ferritin-like domain; InterPro: IPR00833	96.59
cd07911	280	RNRR2_Rv0233_like Ribonucleotide Reductase R2-like	96.54
PRK08326	311	ribonucleotide-diphosphate reductase subunit beta;	96.4
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	96.16
PRK09614	324	nrdF ribonucleotide-diphosphate reductase subunit	96.16
PRK10635	158	bacterioferritin; Provisional	95.95
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	95.82
COG1633	176	Uncharacterized conserved protein [Function unknow	95.67
PRK07209	369	ribonucleotide-diphosphate reductase subunit beta;	95.59
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	95.37
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	95.09
PTZ00211	330	ribonucleoside-diphosphate reductase small subunit	94.99
TIGR00754	157	bfr bacterioferritin. Bacterioferritin is a homomu	94.91
COG0208	348	NrdF Ribonucleotide reductase, beta subunit [Nucle	94.32
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	94.12
PRK13967	322	nrdF1 ribonucleotide-diphosphate reductase subunit	94.03
cd01056	161	Euk_Ferritin eukaryotic ferritins. Eukaryotic Ferr	93.94
PF13668	137	Ferritin_2: Ferritin-like domain	93.86
PLN02492	324	ribonucleoside-diphosphate reductase	93.83
PRK13965	335	ribonucleotide-diphosphate reductase subunit beta;	93.56
PF02332	233	Phenol_Hydrox: Methane/Phenol/Toluene Hydroxylase;	93.36
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	92.78
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	92.77
PRK09101	376	nrdB ribonucleotide-diphosphate reductase subunit	92.13
PRK13966	324	nrdF2 ribonucleotide-diphosphate reductase subunit	92.13
PRK10304	165	ferritin; Provisional	91.95
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	91.82
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	90.97
PF05138	263	PaaA_PaaC: Phenylacetic acid catabolic protein; In	89.75
PRK13456	186	DNA protection protein DPS; Provisional	89.07
cd01043	139	DPS DPS protein, ferritin-like diiron-binding doma	88.26
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	88.14
COG1592	166	Rubrerythrin [Energy production and conversion]	86.87
cd01057	465	AAMH_A Aromatic and Alkene Monooxygenase Hydroxyla	86.36
TIGR02029	337	AcsF magnesium-protoporphyrin IX monomethyl ester	85.45
cd07910	180	MiaE MiaE tRNA-modifying nonheme diiron monooxygen	84.91
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	84.38
PRK12775	1006	putative trifunctional 2-polyprenylphenol hydroxyl	84.32
COG1633	176	Uncharacterized conserved protein [Function unknow	84.21
PF04305	253	DUF455: Protein of unknown function (DUF455); Inte	83.91
cd00904	160	Ferritin Ferritin iron storage proteins. Ferritins	83.78
cd01047	323	ACSF Aerobic Cyclase System Fe-containing subunit	82.53
cd01048	135	Ferritin_like_AB2 Uncharacterized family of ferrit	82.4
CHL00185	351	ycf59 magnesium-protoporphyrin IX monomethyl ester	82.37
PRK13654	355	magnesium-protoporphyrin IX monomethyl ester cycla	81.82
PLN02508	357	magnesium-protoporphyrin IX monomethyl ester [oxid	81.01
cd01058	304	AAMH_B Aromatic and Alkene Monooxygenase Hydroxyla	80.44

>PLN00179 acyl- [acyl-carrier protein] desaturase

Probab=100.00  E-value=8e-133  Score=990.25  Aligned_cols=340  Identities=75%  Similarity=1.234  Sum_probs=332.8

Q ss_pred             cccccCCCCchhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhh
Q 016490           46 KDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMI  125 (388)
Q Consensus        46 ~~~~~~~~~~~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~i  125 (388)
                      +.|++|||+|+|+|||++||+||++||++||||+|++||||||||| ++|+||+++|++||+++++|||++++|||||||
T Consensus        50 ~~~~~~~~~~~~~evl~~LE~~ve~~l~~hL~pvek~WqPhDflP~-~~~~~F~~~v~~lr~~~~~Lpd~~~v~Lvgdmi  128 (390)
T PLN00179         50 HVQVTHSMPPEKLEIFKSLEGWAEENLLPLLKPVEKSWQPQDFLPD-PASEGFYDQVKELRERAAELPDDYFVVLVGDMI  128 (390)
T ss_pred             hcccccCCCHHHHHHHHHHHHHHHHHHHHHhchHhhccCccccCCC-CccCChHHHHhhhhHhhcCCChhhhhhhhhcch
Confidence            8899999999999999999999999999999999999999999999 699999999999999999999999999999999


Q ss_pred             hccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCC
Q 016490          126 TEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFEN  205 (388)
Q Consensus       126 TEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~  205 (388)
                      |||||||||++||++||++|+||+++++|++|+++||||||||||+||+||||||+|||+++|+++|++|++||++++++
T Consensus       129 TEeaLPtY~~~Ln~~~gv~d~tg~~~~~W~~Wvr~WTAEENRHgdlL~~YLylTgrVDm~~iE~t~q~li~~G~d~~~~~  208 (390)
T PLN00179        129 TEEALPTYQTMLNTLDGVRDETGASATPWARWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTEN  208 (390)
T ss_pred             hhhcchHHHHHHHHhcccccccCCCCCchhhhccccccccchHHHHHHHHHhhccCcCHHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             CchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhcc
Q 016490          206 NPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRF  285 (388)
Q Consensus       206 ~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i  285 (388)
                      +||++|||+||||+||+|||+|||++|+++|||+|++||++||+||+||+.||+++|+++||+|||+||.||++||++||
T Consensus       209 ~py~~~vYtSFQErAT~VSH~NTarlA~~~gDp~la~icg~IAaDE~rHe~fY~~iV~~~le~dPd~tm~Aiadmm~~ki  288 (390)
T PLN00179        209 NPYLGFIYTSFQERATFISHGNTARLAKEHGDAKLAKICGTIAADEKRHETAYTRIVEKLFEIDPDGAVLAFADMMRKKI  288 (390)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCChHHHHHHHHHhccHHHHHHHHHHHHHHHHhhCccHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999889


Q ss_pred             CCCCCcCCCCCCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCHHHHHHHHHHhcchHHHHHHHHHhhh
Q 016490          286 RMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKAL  365 (388)
Q Consensus       286 ~MP~~~m~dg~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~~~  365 (388)
                      +||||+|+||+|++||+||++++||+||||++||.|||++||++|+|++++|||+||+|||||||+||+||+|++||++ 
T Consensus       289 ~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W~v~~l~gLs~eg~kArd~l~~l~~rirr~~era~-  367 (390)
T PLN00179        289 TMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRWKVEELTGLSGEGRRAQDYVCGLPPRIRRLEERAQ-  367 (390)
T ss_pred             CCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCcCcccCCCHHHHHHHHHHHHhHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             hhhhhhcCC-CccccceeCCcccC
Q 016490          366 VDMAEKAGS-AVPFSWVFGQEIRI  388 (388)
Q Consensus       366 ~~~~~~~~~-~~~f~wi~~~~~~~  388 (388)
                      . |++|.++ .++|||||+|+|.|
T Consensus       368 ~-~~~~~~~~~~~fsWi~~r~v~~  390 (390)
T PLN00179        368 D-RAKKAKPPSIPFSWIFDREVRL  390 (390)
T ss_pred             h-HHhccCCCCCceeeecCCccCC
Confidence            4 8755444 79999999999975

>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids

Probab=100.00  E-value=2.8e-119  Score=887.90  Aligned_cols=330  Identities=54%  Similarity=0.937  Sum_probs=290.9

Q ss_pred             CchhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhH
Q 016490           54 APEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTY  133 (388)
Q Consensus        54 ~~~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY  133 (388)
                      ||+|+|||++|||||++||++||+|++++||||||||| ++|+||.+++++|||+|++|||++++||+||||||||||+|
T Consensus         1 ~~~~~evl~~Le~~v~~~~~~~l~~~~~~W~PhD~lP~-~~~~~F~~~~~~w~~~~~~Lpd~~~~alv~~llTEd~LPsY   79 (330)
T PF03405_consen    1 PPEKLEVLRELEPVVEENLLRHLKPVEKDWQPHDFLPW-SEGRNFFLGGKDWRPSQSTLPDDARVALVGNLLTEDNLPSY   79 (330)
T ss_dssp             -GGGHHHHHHCHHHHHHHCHHHCH-CGGS--GGGGS-G-CCSTTHHHCCHHHHHHHHTS-HHHHHHHHHHHHHHHTHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhHHhhCCCccccCCC-CccccHhHhcccCCHhhccCCHHHHHHHHHHHHhhhhhhHH
Confidence            68999999999999999999999999999999999999 69999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHH
Q 016490          134 QTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVY  213 (388)
Q Consensus       134 ~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y  213 (388)
                      |++|+++||++|++|+++++|++|+++|||||||||++||+|||+||+|||+++|++++++++.||+++++++|+++|+|
T Consensus        80 ~~~l~~~~~~~~~~ga~~~~W~~wv~~WTAEEnRHg~~L~~YL~vsg~vDp~~lE~~r~~~i~~G~~~~~~~~p~~~~vY  159 (330)
T PF03405_consen   80 HRELATLFGVRDEDGASDSPWGRWVGRWTAEENRHGDALRDYLYVSGRVDPVALERTRMYLITAGFDPGFESDPYLGFVY  159 (330)
T ss_dssp             HHHHTTSTTT--SSSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHCTSS-CCCCCHCCHHHHHH----S-TTHHHHHHHH
T ss_pred             HHHHHhhcCccccCCCCCCcHHHHcccccccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCccCCCChHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987789999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCcCC
Q 016490          214 ASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMY  293 (388)
Q Consensus       214 ~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~m~  293 (388)
                      +||||+||++||+|||++|+.+|||||++||++||+||+||+.||+++|+++|++|||+||.||++||+++|+||||+|+
T Consensus       160 tsfQE~AT~vsh~n~~~~a~~~~DpvL~~il~~IA~DE~rH~~fy~~iv~~~l~~dPd~t~~Ai~~vm~~~f~MPg~~m~  239 (330)
T PF03405_consen  160 TSFQERATQVSHRNTGRLAKQAGDPVLAQILGRIAADEARHEAFYRNIVEAYLELDPDGTMLAIADVMRNKFRMPGHLMP  239 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH----TTTT--
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCcchhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999977999999999


Q ss_pred             CCCCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCHHHHHHHHHHhcchHHHHHHHHHhhhhhhhhhcC
Q 016490          294 DGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALVDMAEKAG  373 (388)
Q Consensus       294 dg~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~~~~~~~~~~~  373 (388)
                      ||+++++|++|++++|++||||+++|.+||++||++|+|++++|||++|++||||||+||.|++||+||++ . ++++++
T Consensus       240 dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W~i~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~~-~-~~~~~~  317 (330)
T PF03405_consen  240 DGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRWKIESRTGLSGEGEKARDYLCALPARLRRFEERAD-R-RAARMA  317 (330)
T ss_dssp             -SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHTTGGG--S--HHHHHHHHHHHHHHHHHHHHTTTTS-T-TTSSS-
T ss_pred             cCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCcccCCChHHHHHHHHHHhhHHHHHHHHHHHH-H-HHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999 4 764555


Q ss_pred             CCccccceeCCcc
Q 016490          374 SAVPFSWVFGQEI  386 (388)
Q Consensus       374 ~~~~f~wi~~~~~  386 (388)
                      ..++|||||||+|
T Consensus       318 ~~~~fswif~r~v  330 (330)
T PF03405_consen  318 KPVPFSWIFNREV  330 (330)
T ss_dssp             -EEE-GGGTT-EE
T ss_pred             CCCceeeecCCCC
Confidence            6899999999987

There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.

>cd01050 Acyl_ACP_Desat Acyl ACP desaturase, ferritin-like diiron-binding domain

Probab=100.00  E-value=3.3e-101  Score=752.20  Aligned_cols=297  Identities=61%  Similarity=1.013  Sum_probs=287.3

Q ss_pred             hhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHH
Q 016490           56 EKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQT  135 (388)
Q Consensus        56 ~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~  135 (388)
                      .|+|||++|||||++|++++|+|++++||||||||| ++|+||..++++|+++|++||++++++|+++||||||||+||+
T Consensus         1 ~~~el~~~le~~~~~~~~~~~~~~~~~W~p~d~lP~-~~~~~f~~~~~~~~~~~~~L~~~~~~~l~~~~itEd~LP~Y~~   79 (297)
T cd01050           1 TKLELLRSLEPVVEENLLNRLKPVEKDWQPHDFLPD-SASEDFDLDVKELRERAAELPDDARVALVGNLLTEEALPTYHS   79 (297)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcccHhhccCCcccCCC-CCCCChhhccccCchhhccCCHHHHHHHHHHHHHhhccHHHHH
Confidence            378999999999999998999999999999999999 6999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHH
Q 016490          136 MLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYAS  215 (388)
Q Consensus       136 ~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~s  215 (388)
                      +||++||++++   ++++|++|+++||+||||||++|++||++||+|||+++|++++++++.||+++++++|+.+|+|+|
T Consensus        80 ~L~~~f~~~~~---~~~~w~~w~~~WtaEE~rHg~aL~~YL~~sg~vdp~~le~~~~~~~~~G~~~~~~~~~~~~~~y~~  156 (297)
T cd01050          80 MLNRLFGLDDE---SPTAWARWVRRWTAEENRHGDLLNKYLYLTGRVDPRALERTRQYLIGSGFDPGTDNSPYRGFVYTS  156 (297)
T ss_pred             HHHHHcCcccc---cccHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCCCCCcccHHHHHHHHH
Confidence            99999998765   679999999999999999999999999999999999999999999999999999889999999999


Q ss_pred             hhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCcCCCC
Q 016490          216 FQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDG  295 (388)
Q Consensus       216 fQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~m~dg  295 (388)
                      |||+||++||+||+++++ +|||||++||++||+||+||++||+++|+++|++||+++|.||++||+ +|+|||+.|.  
T Consensus       157 fqE~aT~v~y~nl~~~a~-~gdPvL~~i~~~IA~DE~rH~~fy~~~v~~~le~dp~~~~~Ai~~v~~-~~~MP~~~~~--  232 (297)
T cd01050         157 FQELATRISHRNTARLAG-AGDPVLAKLLGRIAADEARHEAFYRDIVEALFELDPDGAVLAFADMMR-KIVMPGHLMY--  232 (297)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH-hCCCChhhhh--
Confidence            999999999999999987 899999999999999999999999999999999999999999999998 5999999995  


Q ss_pred             CCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCHHHHHHHHHHhcchHHHHHHHHHh
Q 016490          296 QDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENK  363 (388)
Q Consensus       296 ~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~  363 (388)
                         .+|++|++++|++||||+.+|++||++++++|+|++++|||+||+|||||||+||+|++|++||.
T Consensus       233 ---~~f~~~~~~~a~~gvY~~~~~~~V~~~~~~~w~v~~l~~l~~eg~~ar~~~~~l~~~~~~~~~r~  297 (297)
T cd01050         233 ---PLFERFAAVAARAGVYTARDYDDILEPLVRRWRVEELTGLSGEGRKAQEYLCALPARLRRLAERA  297 (297)
T ss_pred             ---hhHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHhHHHHHHHHhcC
Confidence               23889999999999999999999999999999999999999999999999999999999999874

Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 1

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=98.85  E-value=5.4e-08  Score=77.94  Aligned_cols=104  Identities=20%  Similarity=0.171  Sum_probs=81.3

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      ++.+..+...|..||.+|.+.|.+++.--|...+.....    ....+.......++...+.+....|..+...|.++.+
T Consensus        26 ~~~~~~~~~~~a~~E~~H~~~l~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~E~~~~~~y~~~~~  101 (130)
T cd00657          26 DPDLKDELLEIADEERRHADALAERLRELGGTPPLPPAH----LLAAYALPKTSDDPAEALRAALEVEARAIAAYRELIE  101 (130)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH----HHHhcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999997544333323222    1122222233357889999999999999999999777


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      .   ..||.+++++..|+.||.+|..+++++
T Consensus       102 ~---~~d~~~~~~~~~~~~~E~~H~~~~~~~  129 (130)
T cd00657         102 Q---ADDPELRRLLERILADEQRHAAWFRKL  129 (130)
T ss_pred             h---cCChHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5   459999999999999999999999875

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>PF11583 AurF: P-aminobenzoate N-oxygenase AurF; PDB: 3CHI_B 3CHT_A 3CHH_A 2JCD_B 3CHU_A

Probab=97.96  E-value=0.00024  Score=69.55  Aligned_cols=215  Identities=18%  Similarity=0.180  Sum_probs=124.8

Q ss_pred             chhHHHH-HHhHHHHHHHh---Hhhcc-----------cccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHH
Q 016490           55 PEKVEIF-KSLETWAEHNV---LIHLK-----------PVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVV  119 (388)
Q Consensus        55 ~~~~ev~-~~Le~~~~~~~---~~~l~-----------~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~  119 (388)
                      ++..+++ +-++.|+.+..   ++.+.           +..+.|.|.+++|-- .-+-|.....+-+.+-..  -.+.-.
T Consensus         6 ~~~~~~~~rL~~~~~~r~~v~~dp~~didWd~~~~~~~~~~~~~~p~~~~pl~-gtp~~~~l~~~~r~~l~~--~~~~~~   82 (304)
T PF11583_consen    6 PDREETLQRLLESWARRSYVRSDPETDIDWDAPDDEDFDPDRPWLPPELLPLY-GTPLWERLSEEQRIELLR--HEWANY   82 (304)
T ss_dssp             ----HHHHHHHHHHHHH-HHHHSTTGG------GGTT--TTS-SS-GGGSTTT-T-HHHHTS-HHHHHHHHH--HHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhccccCCchhhhhhhhhhcccCCCcccCCCcccCccC-CCHHHHhCCHHHHHHHHH--HHHHHH
Confidence            3444555 44567888887   65521           345667777777762 323333111111111111  233344


Q ss_pred             HHHHhhhccChh--hHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-------CChHHhHHH
Q 016490          120 LVGEMITEEALP--TYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGR-------VDMKQIERS  190 (388)
Q Consensus       120 Lv~~~iTEd~LP--tY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-------vDp~~lE~~  190 (388)
                      +...+..|..+-  .....+...++.     ..+.+...+.-+...||++|...-.+|+-.+|+       ..+....+.
T Consensus        83 ~~~~i~~E~~l~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~i~DE~rH~~mf~~~~~~~~~~~~l~~~~~~~~~~~~  157 (304)
T PF11583_consen   83 LSQGIWFEQGLVNPAFRMLARDRFPS-----DPDDDAKRYALTEIADEARHSLMFARAINRTGRRRGLAPLPPPYPPRRL  157 (304)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHTT-STT-----TT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----S--HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccCCCCCchHHH
Confidence            445566676654  334444455543     124456777889999999999999999987771       112222222


Q ss_pred             HHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          191 IQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       191 ~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      . ..+.....+.  ..+...|+..++-|.....+.+.+.+  +..-.|.++++++....||+||..|+..+++.....-+
T Consensus       158 ~-~~l~~~~~~~--~~~~~~~~~~lv~Ee~i~~~~~~~~~--D~~iqP~~r~v~~iH~~DEaRHi~f~~~~l~~~~~~l~  232 (304)
T PF11583_consen  158 L-RRLARLLPPW--ERGLLFFAFALVAEEIIDAYQREIAR--DETIQPLVRQVMRIHVRDEARHIAFAREELRRVWPRLS  232 (304)
T ss_dssp             H-HHHHTS-SHH--HHHHHHHHHHHHHHHSBHHHHHHHHT---SSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             H-HHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHhhc--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            2 2223323221  12466888889999888777765444  12237999999999999999999999999999999998


Q ss_pred             chHHHHHHHHHh
Q 016490          271 DDTILALAGMMK  282 (388)
Q Consensus       271 d~t~~Aia~vm~  282 (388)
                      ......++..+.
T Consensus       233 ~~~r~~~~~~l~  244 (304)
T PF11583_consen  233 PAERRALAELLP  244 (304)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            877777666664

>cd01049 RNRR2 Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain

Probab=97.50  E-value=0.0037  Score=60.61  Aligned_cols=186  Identities=15%  Similarity=0.137  Sum_probs=108.9

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHh
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIR  159 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~  159 (388)
                      ..-|.|.+ +|.+.+-.+|.....+   .+..+.-.+.....++.++-+++...-...   .        ..++...+..
T Consensus        20 ~~~W~p~e-i~~~~D~~~~~~l~~~---er~~~~~~la~~~~~d~~v~~~~~~~~~~~---~--------~~~e~~~~~~   84 (288)
T cd01049          20 ANFWTPEE-IDLSKDLKDWEKLTEA---ERHFIKRVLAFLAALDSIVGENLVELFSRH---V--------QIPEARAFYG   84 (288)
T ss_pred             HcCCChhh-cchhhhHHHHhHCCHH---HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---c--------ChHHHHHHHH
Confidence            35899999 7774222334311100   111122222233344555555554433221   1        2567788899


Q ss_pred             hhhhhhhhhhHHHHhHHhHhcCCCh--HH----------hHHHHHHHHhcCCCCC---CCCCchhhHHHHHhhhhhhH-H
Q 016490          160 AWTAEENRHGDLLNKYLYLSGRVDM--KQ----------IERSIQYLIRSGMDHK---FENNPYNGFVYASFQERATF-I  223 (388)
Q Consensus       160 ~WtAEEnRHG~aLr~YL~vsgrvDp--~~----------lE~~~~~li~~G~~~~---~~~~p~~~l~y~sfQE~AT~-i  223 (388)
                      .+.++|+.|+.+-..++-.-+. |+  ..          +.+.. ..+...|+..   +..+.+..++.-.+.|..-+ .
T Consensus        85 ~q~~~E~iH~e~Ys~il~~l~~-~~e~~~~~~~~~~~~~l~~k~-~~~~~~~~~~~~~~~~~~~~~lv~~~~lEgi~f~s  162 (288)
T cd01049          85 FQAFMENIHSESYSYILDTLGK-DEERDELFEAIETDPALKKKA-DWILRWYDNLDDNTKESFAERLVAFAILEGIFFYS  162 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC-CccHHHHHHHHhcCHHHHHHH-HHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998874332 21  11          11111 2222223221   11244556655478887766 4


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc----hHHHHHHHHHh
Q 016490          224 SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD----DTILALAGMMK  282 (388)
Q Consensus       224 ~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd----~t~~Aia~vm~  282 (388)
                      ++..+-.+++..-=|-++++...|++||.+|..|...+++.++...|+    ....-+.++++
T Consensus       163 ~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~~~~~l~~~~~~~~~~~~~~~v~~l~~  225 (288)
T cd01049         163 GFAAIFWLARRGKMPGLAEIIELISRDESLHGDFACLLIRELLNENPELFTEEFKEEVYELIK  225 (288)
T ss_pred             HHHHHHHHHHCCCccchHHHhHHHHccHHHHHHHHHHHHHHHHHhCccccchhHHHHHHHHHH
Confidence            455555554433358899999999999999999999999999998875    33444444444

Ribonucleotide Reductase, R2/beta subunit (RNRR2) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in all eukaryotes, many prokaryotes, several viruses, and few archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites. The beta subunit (R2) contains a diiron cluster that, in its reduced state, reacts with dioxygen to form a stable tyrosyl radical and a diiron(III) cluster. This essential tyrosyl radical is proposed to generate a thiyl radical, located on a cysteine residue in the R1 active site that initiates ribonucleotide reduction. The beta subunit is composed of 10-13 helices, the 8 longest helices form an alpha-

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=97.25  E-value=0.0041  Score=54.05  Aligned_cols=99  Identities=23%  Similarity=0.139  Sum_probs=79.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhh-hHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERA-TFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~A-T~i~y~nt  228 (388)
                      ....+.|...=..||..|+..+.+|+. +.|.++            ..   +...++....|-..--.|.. +...|.++
T Consensus        32 ~~~~a~~f~~~a~eE~~HA~~~~~~l~~l~g~~~------------~~---~~~~~~~~~~l~~~~~~E~~e~~~~y~~~   96 (134)
T cd01041          32 YEQIARLFRATAENEKEHAKGHFKLLKGLGGGDT------------GP---PIGIGDTLENLKAAIAGETYEYTEMYPEF   96 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------CC---CCCcchHHHHHHHHHHhhHHHHHHHHHHH
Confidence            567889999889999999999999997 444444            11   11112556677777778885 66789999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .++|...||...+.+...|+.||..|...|.+.+..
T Consensus        97 ~~~A~~e~d~~~~~~f~~i~~~E~~H~~~l~~~l~~  132 (134)
T cd01041          97 AEVAEEEGFKEAARSFEAIAEAEKVHAERYKKALEN  132 (134)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999988765

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>cd01055 Nonheme_Ferritin nonheme-containing ferritins

Probab=97.13  E-value=0.0089  Score=52.72  Aligned_cols=109  Identities=23%  Similarity=0.209  Sum_probs=87.8

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      +.+.++.|.+....||-.|+..+-+|+.. -|.++...+...         .. ...++...|-...=.|+.....|.++
T Consensus        33 ~~~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~~~~~~~~---------~~-~~~~~~~~l~~al~~E~~~~~~~~~l  102 (156)
T cd01055          33 GLDGFANFFRVQAQEEREHAMKFFDYLNDRGGRVELPAIEAP---------PS-EFESLLEVFEAALEHEQKVTESINNL  102 (156)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeeCCCCCCC---------Cc-ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999974 345554333321         00 11356677777777888888899999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .+.|...||++...++..|..||..|...+.+++..+-..
T Consensus       103 ~~~A~~~~D~~~~~~l~~~l~~q~e~~~~~~~~l~~l~~~  142 (156)
T cd01055         103 VDLALEEKDYATFNFLQWFVKEQVEEEALARDILDKLKLA  142 (156)
T ss_pred             HHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999989999999999999999999999999999876555

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=96.96  E-value=0.017  Score=48.26  Aligned_cols=122  Identities=13%  Similarity=0.067  Sum_probs=80.3

Q ss_pred             cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhc-CCChHH-hHHHHHHHHhcCC---CCC
Q 016490          128 EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSG-RVDMKQ-IERSIQYLIRSGM---DHK  202 (388)
Q Consensus       128 d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsg-rvDp~~-lE~~~~~li~~G~---~~~  202 (388)
                      .+.-.|........         +..-..++..=..||.+|.+.|...+.--+ .-.|.. ............+   ...
T Consensus        12 ~~~~~Y~~~a~~~~---------~~~~~~~~~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (139)
T cd01045          12 EAAEFYLELAEKAK---------DPELKKLFEELAEEEKEHAERLEELYEKLFGEELPELEPEDYKEEVEEEPEFKKALE   82 (139)
T ss_pred             HHHHHHHHHHhHCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcccHHHHHHHHhhhhhHHHHHH
Confidence            44455665554433         446677888889999999999999987433 112222 1111111111100   011


Q ss_pred             CCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          203 FENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       203 ~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      ...+....+-...--|.....+|.++++   ..+||..+.++.+|+.||.+|...+.++
T Consensus        83 ~~~~~~~~l~~a~~~E~~~~~~Y~~~~~---~~~d~~~~~~~~~l~~~E~~H~~~l~~~  138 (139)
T cd01045          83 SLMDPLEALRLAIEIEKDAIEFYEELAE---KAEDPEVKKLFEELAEEERGHLRLLEEL  138 (139)
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            1135566777777788888899998555   5789999999999999999999988764

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>PF00268 Ribonuc_red_sm: Ribonucleotide reductase, small chain; InterPro: IPR000358 Ribonucleotide reductase (1

Probab=96.92  E-value=0.033  Score=54.19  Aligned_cols=114  Identities=18%  Similarity=0.136  Sum_probs=76.3

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH-------------hHHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ-------------IERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~-------------lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++...++..+.++|+.|..+-..++-.-+ -|+..             +.+.. ..+..-++..  .+....+++-.+.
T Consensus        84 ~~E~~~~l~~q~~~E~iH~~sYs~il~~l~-~~~~~~~~~~~~~~~~~~l~~k~-~~i~~~~~~~--~~~~~~lv~~~~l  159 (281)
T PF00268_consen   84 SPEIRAFLTFQAFMEAIHAESYSYILDSLG-NDPKERDEIFDWVEEDPELQKKL-DWIEKWYEDN--DSLAEKLVASVIL  159 (281)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SSHHHHHHHHHHHHHSHHHHHHH-HHHHHHHCSS--SHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHhhhHHhhHH-HHHHhhchhh--hhHHHHHHHHHHH
Confidence            567888999999999999999988887544 34432             22212 2334444432  1223455677777


Q ss_pred             hhhhHHH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          218 ERATFIS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       218 E~AT~i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      |.--+.+ +.-+.-+++.-.=|-+.++...|.+||.+|..|...+++.+.+-
T Consensus       160 Egi~f~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~e  211 (281)
T PF00268_consen  160 EGILFYSGFAYILYLARQGKMPGLAEIIKLIMRDESLHVEFGIYLFRTLVEE  211 (281)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            8753322 22233343323368899999999999999999999999998864

17.4.1 from EC) [, ] catalyzes the reductive synthesis of deoxyribonucleotides from their corresponding ribonucleotides: 2'-deoxyribonucleoside diphosphate + oxidized thioredoxin + H2O = ribonucleoside diphosphate + reduced thioredoxin It provides the precursors necessary for DNA synthesis. RNRs divide into three classes on the basis of their metallocofactor usage. Class I RNRs, found in eukaryotes, bacteria, bacteriophage and viruses, use a diiron-tyrosyl radical, Class II RNRs, found in bacteria, bacteriophage, algae and archaea, use coenzyme B12 (adenosylcobalamin, AdoCbl). Class III RNRs, found in anaerobic bacteria and bacteriophage, use an FeS cluster and S-adenosylmethionine to generate a glycyl radical. Many organisms have more than one class of RNR present in their genomes. Ribonucleotide reductase is an oligomeric enzyme composed of a large subunit (700 to 1000 residues) and a small subunit (300 to 400 residues) - class II RNRs are less complex, using the small molecule B12 in place of the small chain []. The small chain binds two iron atoms [] (three Glu, one Asp, and two His are involved in metal binding) and contains an active site tyrosine radical. The regions of the sequence that contain the metal-binding residues and the active site tyrosine are conserved in ribonucleotide reductase small chain from prokaryotes, eukaryotes and viruses. We have selected one of these regions as a signature pattern. It contains the active site residue as well as a glutamate and a histidine involved in the binding of iron.; GO: 0004748 ribonucleoside-diphosphate reductase activity, 0009186 deoxyribonucleoside diphosphate metabolic process, 0055114 oxidation-reduction process; PDB: 1JK0_B 1SMS_B 2VUX_B 4DJN_B 3HF1_B 2RCC_B 2BQ1_I 1R2F_A 2R2F_A 2O1Z_A ....

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=96.82  E-value=0.0011  Score=55.55  Aligned_cols=101  Identities=20%  Similarity=0.278  Sum_probs=65.1

Q ss_pred             HHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCC---chhhHHHHHhh-hhhhHHHHHHH
Q 016490          154 WATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENN---PYNGFVYASFQ-ERATFISHGNT  228 (388)
Q Consensus       154 w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~---p~~~l~y~sfQ-E~AT~i~y~nt  228 (388)
                      -..-...=..+|.+|...|.+.+.- .+..+|......    +..-+.+.....   .+...+..+.+ |.-+..+|..+
T Consensus        31 ~~~~f~~lA~~E~~H~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~  106 (137)
T PF02915_consen   31 LKELFRRLAEEEQEHAKFLEKLLRKLGPGEEPPFLEEK----VEYSFFPKLEEETDENLEEALEMAIKEEKDAYEFYAEL  106 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHCSTTHHTHCHCCC----CCHCCCCTCCSSHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccCcchhhhh----hhhhhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4445566677899999999988852 233333311111    111111111111   13444555555 77788889885


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      ++   ..+||..++++..|+.||.+|...|.++
T Consensus       107 a~---~~~~~~~~~~~~~l~~~E~~H~~~l~~l  136 (137)
T PF02915_consen  107 AR---KAPDPEIRKLFEELAKEEKEHEDLLEKL  136 (137)
T ss_dssp             HH---HTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HH---HCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55   6889999999999999999999999876

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=96.75  E-value=0.011  Score=52.37  Aligned_cols=104  Identities=16%  Similarity=0.098  Sum_probs=69.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCC---CCCCCchhhHHHHHhhhhhhHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDH---KFENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~---~~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      +..-..-+..=..||-+|...|.+.+. +.|  +|.......  ....-|.+   ....++...+-...-.|..+..+|.
T Consensus        46 ~~~~k~~f~~lA~eE~~H~~~l~~~i~~lgg--~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~~~~~~E~~ai~~Y~  121 (154)
T cd07908          46 YPEIAETFLGIAIVEMHHLEILGQLIVLLGG--DPRYRSSSS--DKFTYWTGKYVNYGESIKEMLKLDIASEKAAIAKYK  121 (154)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCcchhhcc--ccCCcCCccccCCccCHHHHHHHHHHHHHHHHHHHH
Confidence            455666677777899999999999875 433  232211110  00000111   1112444455556667999999999


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      ++++   ..+||.++.++..|+.||..|...+.++
T Consensus       122 ~~~~---~~~d~~~r~ll~~I~~eE~~H~~~L~~~  153 (154)
T cd07908         122 RQAE---TIKDPYIRALLNRIILDEKLHIKILEEL  153 (154)
T ss_pred             HHHH---HcCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            8666   5689999999999999999999988765

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=96.68  E-value=0.022  Score=49.33  Aligned_cols=92  Identities=20%  Similarity=0.230  Sum_probs=75.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      .+..+.|.+.=..||..|+..+.+++   +.+.                     .+....|-...-.|..-...|.++.+
T Consensus        32 ~~~~A~~f~~~a~eE~~HA~~~~~~l---~~i~---------------------~~~~~~le~a~~~E~~~~~~~~~~~~   87 (123)
T cd01046          32 YPEVAEELKRIAMEEAEHAARFAELL---GKVS---------------------EDTKENLEMMLEGEAGANEGKKDAAT   87 (123)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHH---hcCc---------------------ccHHHHHHHHHHhHHHHHHhHHHHHH
Confidence            56788899988999999999999976   2221                     25556666666677766666889999


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      .|..-||...+..+..|+.+|..|...|.+.+++++
T Consensus        88 ~A~~egd~~~~~~~~~~~~~E~~H~~~~~~~l~~~~  123 (123)
T cd01046          88 EAKAEGLDEAHDFFHEAAKDEARHGKMLKGLLERYF  123 (123)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999998763

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=96.62  E-value=0.092  Score=45.85  Aligned_cols=114  Identities=16%  Similarity=0.145  Sum_probs=83.6

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhc-CCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSG-RVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsg-rvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      +......|...=..||.+|.+.+.+|+.--| ......+.           .+....+....+-...=.|..+...|+.+
T Consensus        35 ~~~~~~~~f~~~a~ee~~Ha~~lae~i~~lGg~p~~~~~~-----------~~~~~~~~~~~l~~~l~~E~~~~~~y~~~  103 (153)
T cd00907          35 GLEKLAERFRKESIEEMKHADKLIERILFLEGLPNLQRLG-----------KLRIGEDVPEMLENDLALEYEAIAALNEA  103 (153)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCC-----------CCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567778888888999999999999998433 32221110           11111244455666666788888899999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTIL  275 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~  275 (388)
                      .++|...+|+....++..|.+||..|..+|.+.++. ++..++++-+
T Consensus       104 ~~~A~~~~D~~t~~~l~~~~~~e~~h~~~l~~~l~~-~~~~g~~~~~  149 (153)
T cd00907         104 IALCEEVGDYVSRDLLEEILEDEEEHIDWLETQLDL-IDKMGLQNYL  149 (153)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCHHHHH
Confidence            998888899999999999999999999999999876 4444444443

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>PF00210 Ferritin: Ferritin-like domain; InterPro: IPR008331 Ferritin is one of the major non-haem iron storage proteins in animals, plants, and microorganisms []

Probab=96.59  E-value=0.056  Score=45.47  Aligned_cols=108  Identities=18%  Similarity=0.220  Sum_probs=85.8

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-C--ChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGR-V--DMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-v--Dp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      ...+.+.+......||..|++.+.+|+.-=|. .  ++..+.+     +.   .|....++...|...---|......|.
T Consensus        29 ~~~~l~~~~~~~a~e~~~h~~~l~e~i~~lgg~p~~~~~~~~~-----~~---~~~~~~~~~~~l~~~l~~e~~~~~~~~  100 (142)
T PF00210_consen   29 NFPGLAKFFQDQAEEEREHADELAERILMLGGKPSGSPVEIPE-----IP---KPPEWTDPREALEAALEDEKEIIEEYR  100 (142)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-SSTSHHHHHH-----HH---SSSSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHhHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHhhh-----hh---ccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999984333 2  2332332     11   111123777788888888899999999


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      .+.+.|...+||.+..++..+-.+|..|..+...++..+
T Consensus       101 ~l~~~a~~~~D~~t~~~~~~~l~~~~~~~~~l~~~l~~l  139 (142)
T PF00210_consen  101 ELIKLAEKEGDPETADFLDEFLEEEEKHIWMLQAHLTNL  139 (142)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999888999999999999999999999999988764

It consists of a mineral core of hydrated ferric oxide, and a multi-subunit protein shell that encloses the former and assures its solubility in an aqueous environment. In animals the protein is mainly cytoplasmic and there are generally two or more genes that encode closely related subunits - in mammals there are two subunits which are known as H(eavy) and L(ight). In plants ferritin is found in the chloroplast []. This entry represents the main structural domain of ferritin. The domain is also found in other ferritin-like proteins such as members of the DNA protection during starvation (DPS) family and bacterioferritins.; GO: 0008199 ferric iron binding, 0006879 cellular iron ion homeostasis; PDB: 1N1Q_C 4DYU_E 2YJJ_D 2YJK_B 2VXX_B 3FVB_A 2WLU_A 2XGW_A 2WLA_A 1Z4A_D ....

>cd07911 RNRR2_Rv0233_like Ribonucleotide Reductase R2-like protein, Mn/Fe-binding domain

Probab=96.54  E-value=0.083  Score=51.62  Aligned_cols=125  Identities=16%  Similarity=0.148  Sum_probs=73.9

Q ss_pred             hhHHHHHhhhhhhhhhhhHHHHhHHhHhcCC-ChHHh----HHHH--H---HHHhcCCCCCCCCCchh-hHHHHHhhhhh
Q 016490          152 TSWATWIRAWTAEENRHGDLLNKYLYLSGRV-DMKQI----ERSI--Q---YLIRSGMDHKFENNPYN-GFVYASFQERA  220 (388)
Q Consensus       152 ~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrv-Dp~~l----E~~~--~---~li~~G~~~~~~~~p~~-~l~y~sfQE~A  220 (388)
                      .+...+...=..+|++|+.+-..++..=+.- |....    +...  +   ..+..-++.....+-+. .++|..+.|--
T Consensus        78 ~e~~~~l~~q~~~EaiH~esYs~~l~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~lEGi  157 (280)
T cd07911          78 LEEEMYLTQFLFEEAKHTDFFRRWLDAVGVSDDLSDLHTAVYREPFYEALPYAELRLYLDASPAAQVRASVTYNMIVEGV  157 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhhhhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHH
Confidence            3455667888999999999999998732221 11111    1111  1   11221112111001112 34566678874


Q ss_pred             hHHH-----HHHHHHHHhhhC-CHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 016490          221 TFIS-----HGNTARLVKEHG-DMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMM  281 (388)
Q Consensus       221 T~i~-----y~ntarla~~~g-dPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm  281 (388)
                      -+-+     +..+++    .| -|-+.++...|.+||.+|-.|...+++.+...+|. ....+.+.+
T Consensus       158 lf~sgF~~~~~~l~~----~g~m~g~~~~i~~I~RDE~~H~~fg~~l~~~l~~e~p~-~~~~~~e~~  219 (280)
T cd07911         158 LAETGYYAWRTICEK----RGILPGMQEGIRRLGDDESRHIAWGTFTCRRLVAADDA-NWDVFEERM  219 (280)
T ss_pred             HHHHHHHHHHHHHhh----cCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChh-HHHHHHHHH
Confidence            4322     222322    23 78999999999999999999999999999988873 333344444

Rv0233 is a Mycobacterium tuberculosis ribonucleotide reductase R2 protein with a heterodinuclear manganese/iron-carboxylate cofactor located in its metal center. The Rv0233-like family may represent a structural/functional counterpart of the evolutionary ancestor of the RNRR2's (Ribonucleotide Reductase, R2/beta subunit) and the bacterial multicomponent monooxygenases. RNRR2s belong to a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in prokaryotes and archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites.

>PRK08326 ribonucleotide-diphosphate reductase subunit beta; Validated

Probab=96.40  E-value=0.079  Score=52.93  Aligned_cols=166  Identities=15%  Similarity=0.154  Sum_probs=93.9

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH--------HHHhhhccChhhHHHHhhhhcCCcccCCCCc
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL--------VGEMITEEALPTYQTMLNSLDGVRDETGASL  151 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L--------v~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~  151 (388)
                      ...|.|.+ ||++ +      .+++|+    +|+++-.-.+        .++.++-.|++.+..    .+..     +..
T Consensus        36 ~~fW~peE-idls-~------D~~dw~----~Lt~~Er~~~~~ila~f~~~d~~V~~nl~~~i~----~~~~-----~~~   94 (311)
T PRK08326         36 AKFWNPAD-IDFS-R------DAEDWE----KLSDEERDYATRLCAQFIAGEEAVTLDIQPLIS----AMAA-----EGR   94 (311)
T ss_pred             HcCCCHHh-cCcc-c------hHHHHH----hCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh----hccc-----cCC
Confidence            46799998 8884 2      234553    3555433222        244444455532221    1110     001


Q ss_pred             hhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHH------HHHHH-----hcCCCCCCCCC---chhhHH-HHHh
Q 016490          152 TSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERS------IQYLI-----RSGMDHKFENN---PYNGFV-YASF  216 (388)
Q Consensus       152 ~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~------~~~li-----~~G~~~~~~~~---p~~~l~-y~sf  216 (388)
                      ++-..++..=..+|++|..+-..|+..-+.-+.  +...      .+..+     ....+.....+   .+..++ |..+
T Consensus        95 ~e~~~~l~~q~~~EaiH~e~Y~~~le~l~~~~~--~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~a~v~~~~~  172 (311)
T PRK08326         95 LEDEMYLTQFAFEEAKHTEAFRRWFDAVGVTED--LSVYTDDNPSYRQIFYEELPAALNRLSTDPSPENQVRASVTYNHV  172 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHhcCHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence            344566778889999999999999874343321  1111      11110     00011111112   233333 6667


Q ss_pred             hhhhhHHH-----HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          217 QERATFIS-----HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       217 QE~AT~i~-----y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      .|---+.+     ..++++   .---|-++++...|.+||.+|-.|...+++.+...+|.
T Consensus       173 iEGi~f~sgF~~~~~~l~~---~~~mpgl~~~i~~I~RDE~~H~~fg~~l~~~l~~e~p~  229 (311)
T PRK08326        173 VEGVLAETGYYAWRKICVT---RGILPGLQELVRRIGDDERRHIAWGTYTCRRLVAADDS  229 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence            88743221     123333   22378899999999999999999999999999988885

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=96.16  E-value=0.016  Score=48.51  Aligned_cols=54  Identities=22%  Similarity=0.241  Sum_probs=47.0

Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          211 FVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       211 l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      |-..+-.|.....+|..+++.++.-| |.++.++..||.||.+|..++.++...+
T Consensus         3 L~~A~~~E~~~~~~Y~~~a~~~~~~~-p~~~~~f~~lA~~E~~H~~~~~~l~~~~   56 (137)
T PF02915_consen    3 LEMAIKMELEAAKFYRELAEKAKDEG-PELKELFRRLAEEEQEHAKFLEKLLRKL   56 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHCHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            34556689999999999999876555 9999999999999999999999999875

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>PRK09614 nrdF ribonucleotide-diphosphate reductase subunit beta; Reviewed

Probab=96.16  E-value=0.14  Score=51.18  Aligned_cols=121  Identities=15%  Similarity=-0.024  Sum_probs=73.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH--hHH-------H--HHHHHhcCCCCCCCCCchhhHHHHHhhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ--IER-------S--IQYLIRSGMDHKFENNPYNGFVYASFQER  219 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~--lE~-------~--~~~li~~G~~~~~~~~p~~~l~y~sfQE~  219 (388)
                      .++...+...+.++|+.|+.+-...+-.-+ .+.+.  +..       .  +...+..-|+......-...+++-.+.|.
T Consensus        87 ~~E~~~~~~~q~~~E~iH~~sYs~il~tl~-~~~~~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~~~~~~~~~lEg  165 (324)
T PRK09614         87 TPEEEAVLANIAFMEAVHAKSYSYIFSTLC-SPEEIDEAFEWAEENPYLQKKADIIQDFYEPLKKKILRKAAVASVFLEG  165 (324)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChhHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            567788999999999999998777776322 12222  111       0  11122222332111123445566666675


Q ss_pred             hhHHH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          220 ATFIS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       220 AT~i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      --+-+ ..-+--+++.--=|-++++...|++||.+|-.|...+++.++...|..
T Consensus       166 i~f~sgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~~~  219 (324)
T PRK09614        166 FLFYSGFYYPLYLARQGKMTGTAQIIRLIIRDESLHGYYIGYLFQEGLEELPEL  219 (324)
T ss_pred             HHHHHHHHHHHHHHhCCCcccHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCCHh
Confidence            43322 111112322222477899999999999999999999999999887763

>PRK10635 bacterioferritin; Provisional

Probab=95.95  E-value=0.14  Score=46.52  Aligned_cols=103  Identities=12%  Similarity=0.048  Sum_probs=82.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ...++.|...=..||-+|++.|-+++. +-|..+...+..         ..++  .++...|-..--.|+-+.-.|+...
T Consensus        37 ~~~la~~~~~ea~eEm~HA~~l~eRIl~LgG~P~~~~~~~---------~~~g--~~v~eml~~dl~~E~~ai~~y~e~i  105 (158)
T PRK10635         37 LMRLNDVEYHESIDEMKHADKYIERILFLEGIPNLQDLGK---------LNIG--EDVEEMLRSDLRLELEGAKDLREAI  105 (158)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC---------CCCC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456777776558999999999999998 544445544421         2222  3777788888888999999999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      ++|...+|++-++++..|-.||..|...+.+.++.
T Consensus       106 ~~a~~~~D~~s~~ll~~iL~dEe~H~~~le~~l~~  140 (158)
T PRK10635        106 AYADSVHDYVSRDMMIEILADEEGHIDWLETELDL  140 (158)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988899999999999999999999999888765

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=95.82  E-value=0.17  Score=46.08  Aligned_cols=101  Identities=12%  Similarity=0.092  Sum_probs=64.6

Q ss_pred             hHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHH
Q 016490          153 SWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLV  232 (388)
Q Consensus       153 ~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla  232 (388)
                      ....-+..=..||-.|-..|..=+..=|. |+.-..     - +++|-... .++..-+.+.--=|.....-|.++.+  
T Consensus        54 ~~~d~l~~ia~eEm~H~e~la~~I~~Lg~-~~~g~p-----w-~~~yv~~~-~d~~~~L~~ni~aE~~Ai~~Y~~l~~--  123 (156)
T cd01051          54 KYRDLLLDIGTEELSHLEMVATLIAMLLK-DSQGVP-----W-TAAYIQSS-GNLVADLRSNIAAESRARLTYERLYE--  123 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCc-----C-CCcccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            33444444455777776666655441111 111000     0 12231121 25566677777778888888998666  


Q ss_pred             hhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          233 KEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       233 ~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                       .+.||.+..++.+|..||..|..-|.+.++.
T Consensus       124 -~~~Dp~v~~~l~~I~~rE~~H~~~f~~~l~~  154 (156)
T cd01051         124 -MTDDPGVKDTLSFLLVREIVHQNAFGKALES  154 (156)
T ss_pred             -HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             4679999999999999999999999998875

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=95.67  E-value=0.27  Score=45.69  Aligned_cols=134  Identities=19%  Similarity=0.112  Sum_probs=91.7

Q ss_pred             HHhhhc-cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChH-HhHHHHHH-HHhc
Q 016490          122 GEMITE-EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMK-QIERSIQY-LIRS  197 (388)
Q Consensus       122 ~~~iTE-d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~-~lE~~~~~-li~~  197 (388)
                      .+.-.| ++.=-|. .++.+..        +..-..-+..=..||-+|-+.+.+.++ +++.--+. ..+.+... .+..
T Consensus        31 ~Ai~~E~eA~~fY~-~lae~~~--------~~~~rk~~~~la~eE~~H~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T COG1633          31 IAIRGELEAIKFYE-ELAERIE--------DEEIRKLFEDLADEEMRHLRKFEKLLEKLTPKEVSSEEEEGEIESEILEY  101 (176)
T ss_pred             HHHHHHHHHHHHHH-HHHHhcC--------CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhcchhhhhccc
Confidence            333445 4444454 4444442        446677777888999999999999987 44333111 11222222 2223


Q ss_pred             CCC---CCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          198 GMD---HKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       198 G~~---~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      +..   .....+....+-+...+|+.|-.+|.-+..   ...++..+.+...|+.||..|+..+....+.+..
T Consensus       102 ~~~~~~~~~~~~~~~~I~~a~~~E~~t~~~Y~~~~~---~~~~~~~~~~~~~~a~~E~~H~~~l~~~~~~~~~  171 (176)
T COG1633         102 LQPGKEMEKSVSYLEAIEAAMEAEKDTIEFYEELLD---ELVNEEAKKLFKTIADDEKGHASGLLSLYNRLTS  171 (176)
T ss_pred             cCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHH---HccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            333   222346778899999999999999997444   5789999999999999999999999999887654

>PRK07209 ribonucleotide-diphosphate reductase subunit beta; Validated

Probab=95.59  E-value=0.64  Score=47.62  Aligned_cols=168  Identities=14%  Similarity=0.171  Sum_probs=94.4

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH--------HHHhhhccChhhHHHHhhhhcCCcccCCCCc
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL--------VGEMITEEALPTYQTMLNSLDGVRDETGASL  151 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L--------v~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~  151 (388)
                      ...|.|.+ ||-+       ..+.+|+ ...+|+++-.-++        .++.++-+|+..   .+..++        ..
T Consensus        68 ~nfW~peE-I~ls-------~Di~dw~-~~~~Lt~~Er~~~~~il~ff~~~Ds~v~~nl~~---~l~~~i--------~~  127 (369)
T PRK07209         68 ANHWMPQE-VNMS-------RDIALWK-SPNGLTEDERRIVKRNLGFFSTADSLVANNIVL---AIYRHI--------TN  127 (369)
T ss_pred             hCCCCchh-cCcc-------ccHHHHc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHc--------CH
Confidence            45799988 5552       2344552 1124665543332        334444445421   122223        25


Q ss_pred             hhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHH----------HHHHHH---hc----CCCCCCC---CCchhhH
Q 016490          152 TSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIER----------SIQYLI---RS----GMDHKFE---NNPYNGF  211 (388)
Q Consensus       152 ~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~----------~~~~li---~~----G~~~~~~---~~p~~~l  211 (388)
                      ++...++..+.++|+.|+.+-...+-.-+ .|+..+..          ....+.   ..    +++..+.   .+.+..+
T Consensus       128 pE~r~~l~~q~~~E~iHs~sYs~ildtl~-~~~~e~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l  206 (369)
T PRK07209        128 PECRQYLLRQAFEEAIHTHAYQYIVESLG-LDEGEIFNMYHEVPSIRAKDEFLIPFTRSLTDPNFKTGTPENDQKLLRNL  206 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHhCHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence            67778999999999999998765554222 34433111          111111   11    1211111   1234555


Q ss_pred             H-HHHhhhhhhH----HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          212 V-YASFQERATF----ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       212 ~-y~sfQE~AT~----i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      | |.+|.|-.-+    .+--++++   .--=|-++++...|++||.+|-.|+..+++.+....|+
T Consensus       207 va~~~ilEGi~FysgFa~~~~l~r---~g~M~G~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~p~  268 (369)
T PRK07209        207 IAFYCIMEGIFFYVGFTQILSLGR---QNKMTGIAEQYQYILRDESMHLNFGIDLINQIKLENPH  268 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhh---cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            5 4566675432    22223333   22246789999999999999999999999999887774

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=95.37  E-value=0.55  Score=48.74  Aligned_cols=115  Identities=12%  Similarity=0.057  Sum_probs=70.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHH---------HHHHHhcCCCCCCCCCchhhHHHHHhhhhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERS---------IQYLIRSGMDHKFENNPYNGFVYASFQERAT  221 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~---------~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT  221 (388)
                      .++-..+...|+++|+.|+.+-...+-.=+. |.+.....         .+... . ..+.....-+..++...|.|-.-
T Consensus       175 ~pE~~~~~~~q~~~E~iHsesYs~il~tl~~-~~~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~~lv~~~~lEgi~  251 (410)
T PRK12759        175 NNEIRNMLGSFAAREGIHQRAYALLNDTLGL-PDSEYHAFLEYKAMTDKIDFMM-D-ADPTTRRGLGLCLAKTVFNEGVA  251 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHhhHHHHHHHHHHH-h-cCcchHHHHHHHHHHHHHHHHHH
Confidence            5677789999999999999986655442111 22222211         11111 1 22221112234566666777632


Q ss_pred             H----HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          222 F----ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       222 ~----i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      +    .+--++++   .--=|-++++...|++||..|-.|...+++.+++..|+
T Consensus       252 Fys~Fa~~~~l~~---~g~m~g~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~  302 (410)
T PRK12759        252 LFASFAMLLNFQR---FGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPY  302 (410)
T ss_pred             HHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence            2    22223333   11247789999999999999999999999999988875

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=95.09  E-value=0.47  Score=41.18  Aligned_cols=108  Identities=15%  Similarity=0.101  Sum_probs=74.1

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCC----CCCCCchhhHHHHHhhhhhhHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDH----KFENNPYNGFVYASFQERATFISH  225 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~----~~~~~p~~~l~y~sfQE~AT~i~y  225 (388)
                      .+.....|+..=..||..|.+.+..++..-|..-......   +...+|+.+    ....+....+-..--.|..+...|
T Consensus        36 ~f~~l~~~~~~~~~ee~~Had~laEri~~lGg~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~  112 (148)
T cd01052          36 EGEGIKEELEEAAEEELNHAELLAERIYELGGTPPRDPKD---WYEISGCKCGYLPPDPPDVKGILKVNLKAERCAIKVY  112 (148)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHH---HHHHhcccccCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            4667888998889999999999999999534332211211   122222111    111233334444444677777778


Q ss_pred             HHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          226 GNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       226 ~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      +++.++|.. +|++...++..|-+||..|...|..+
T Consensus       113 ~~~~~~a~~-~D~~t~~ll~~~l~de~~h~~~~~~~  147 (148)
T cd01052         113 KELCDMTHG-KDPVTYDLALAILNEEIEHEEDLEEL  147 (148)
T ss_pred             HHHHHHHcC-CChHHHHHHHHHHHHHHHHHHHHHhh
Confidence            888887765 89999999999999999999998875

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>PTZ00211 ribonucleoside-diphosphate reductase small subunit; Provisional

Probab=94.99  E-value=0.69  Score=46.56  Aligned_cols=118  Identities=15%  Similarity=0.035  Sum_probs=69.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHh-------------HHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQI-------------ERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~l-------------E~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++...+...|.+.|+.|+.+-.-.+-.-+ -|+...             .+..+. +..-++-  ..+++..++.-++.
T Consensus        97 ~pE~~~~~~~q~~~E~iHs~sYs~il~tl~-~~~~~~~~~f~~~~~~p~i~~K~~~-~~~~~~~--~~~~~~~lv~~~~l  172 (330)
T PTZ00211         97 VPEARCFYGFQIAMENIHSETYSLLIDTYI-TDEEEKDRLFHAIETIPAIKKKAEW-AAKWINS--SNSFAERLVAFAAV  172 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHhCHHHHHHHHH-HHHHHhc--chHHHHHHHHHHHh
Confidence            456778999999999999987654433211 133321             111111 1111221  12556666655566


Q ss_pred             hhhhHHH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          218 ERATFIS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       218 E~AT~i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      |.--+.+ +..+--+++.--=|-++++...|++||.+|-.|...++..+++..|.+
T Consensus       173 Egi~F~sgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~  228 (330)
T PTZ00211        173 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNKLPRE  228 (330)
T ss_pred             hhHHhhhhHHHHHHHHhcCCCcchHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHH
Confidence            6543221 122222322222467899999999999999999999999998665543

>TIGR00754 bfr bacterioferritin

Probab=94.91  E-value=0.65  Score=41.37  Aligned_cols=105  Identities=12%  Similarity=0.067  Sum_probs=78.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-CChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGR-VDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-vDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -.+.+.|...=..||..|++-|..|+.--|. .+...+        .   .+....+....|-..-=.|......|+.+.
T Consensus        37 ~~g~a~~~~~~a~EE~~Ha~~laeri~~lGg~p~~~~i--------~---~~~~~~~~~e~l~~~l~~E~~~~~~~~e~i  105 (157)
T TIGR00754        37 LKELADHEYHESIDEMKHADEIIERILFLEGLPNLQDL--------G---KLRIGETVREMLEADLALELDVLNRLKEAI  105 (157)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcC--------C---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4677788877778999999999999985343 231111        1   111123555556666667888888888888


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      ++|...+|+....++..|.+||..|..++...++.+-
T Consensus       106 ~~A~~~~D~~t~~ll~~~i~eee~h~~~l~~~l~~~~  142 (157)
T TIGR00754       106 AYAEEVRDYVSRDLLEEILEDEEEHIDWLETQLELID  142 (157)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888899999999999999999999999999887643

Bacterioferritin is a homomultimer most species. In Neisseria gonorrhoeae, Synechocystis PCC6803, Magnetospirillum magnetotacticum, and Pseudomonas aeruginosa, two types of subunit are found in a heteromultimeric complex, with each species having one member of each type. At present, both types of subunit are including in this single model.

>COG0208 NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism]

Probab=94.32  E-value=2.3  Score=43.62  Aligned_cols=124  Identities=17%  Similarity=0.085  Sum_probs=79.0

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHH-----------hHHHHHHHHhcCCCCCCCCCc--------hhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQ-----------IERSIQYLIRSGMDHKFENNP--------YNG  210 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~-----------lE~~~~~li~~G~~~~~~~~p--------~~~  210 (388)
                      .+.-..|+..|..+|+-|+..=.--+- +..--+...           +.+. ..-|..-|+- ...+|        +..
T Consensus       102 ~pe~~~~l~~~af~E~iHs~SYs~i~~tl~~~e~~~~~~~~~~~~~~~l~~k-~~~i~~~y~~-~~~~~~~~~~~~~~~~  179 (348)
T COG0208         102 TPEEEAVLTNQAFMEAIHARSYSYIFDTLGPTEDEDEVFDDWVATNEILQEK-AEIILRYYDD-LGDDPDDPLEEFLLKL  179 (348)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHhccHHHHHH-HHHHHHHHHh-ccCCcccchHHHHHHH
Confidence            566688999999999999976432222 111011111           1111 1222332332 22244        778


Q ss_pred             HHHHHhhhhh----hHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHH
Q 016490          211 FVYASFQERA----TFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAG  279 (388)
Q Consensus       211 l~y~sfQE~A----T~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~  279 (388)
                      ++|.++-|--    -+.+.-++++..   -=|-.++|.+.|.+||.+|-.++..++.+++...|+.--..+.+
T Consensus       180 ~v~~~~lEgi~FYsGFa~~~~l~~r~---kM~g~a~iirlI~RDE~~H~~~~~~l~~~~~~e~~~~~t~e~~~  249 (348)
T COG0208         180 VVASVILEGILFYSGFAYPLYLARRG---KMPGTAEIIRLIIRDEALHLYFIGYLIQRLVAENPELWTAELKD  249 (348)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHhhhHHHHH
Confidence            8888888853    245556666643   25678999999999999999999999999999999853333333

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=94.12  E-value=0.11  Score=44.83  Aligned_cols=46  Identities=24%  Similarity=0.227  Sum_probs=39.9

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      -|.-...+|+++++.   ..+|.+++++..||.+|.+|+.+|.++....
T Consensus         9 ~E~~~~~~Y~~la~~---~~~~~~k~~f~~lA~~E~~H~~~~~~~~~~~   54 (125)
T cd01044           9 DEITEAAIYRKLAKR---EKDPENREILLKLAEDERRHAEFWKKFLGKR   54 (125)
T ss_pred             HHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            467778899996664   5699999999999999999999999988764

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>PRK13967 nrdF1 ribonucleotide-diphosphate reductase subunit beta; Provisional

Probab=94.03  E-value=2.3  Score=42.89  Aligned_cols=112  Identities=10%  Similarity=-0.055  Sum_probs=65.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH--hHHH------HH---HHHhcCCCCCCCCCchhhHHHHHhhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ--IERS------IQ---YLIRSGMDHKFENNPYNGFVYASFQER  219 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~--lE~~------~~---~li~~G~~~~~~~~p~~~l~y~sfQE~  219 (388)
                      .++-..++..|..+|+.|+.+-..-+-.=+. +.+.  +...      ++   ..+..-|+.   .+.+..++...+.|-
T Consensus        87 ~~e~~~~l~~~~~~E~iHs~sYs~il~tl~~-~~~~~~~f~~~~~~~~l~~K~~~i~~~~~~---~~~~~~~v~~~~lEg  162 (322)
T PRK13967         87 TPHEEAVLTNMAFMESVHAKSYSSIFSTLCS-TKQIDDAFDWSEQNPYLQRKAQIIVDYYRG---DDALKRKASSVMLES  162 (322)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ChhHHHHHHHHhcCHHHHHHHHHHHHHhcC---CcHHHHHHHHHHHHH
Confidence            4566789999999999999986655541111 1111  1111      11   223333442   255666677777776


Q ss_pred             hhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          220 ATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       220 AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      .-+ +.....--+++.--=|-++++...|++||..|-.+....+.+.+
T Consensus       163 i~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~~~~~~~  210 (322)
T PRK13967        163 FLFYSGFYLPMYWSSRGKLTNTADLIRLIIRDEAVHGYYIGYKCQRGL  210 (322)
T ss_pred             HHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            331 11111112222222477999999999999999999998664444

>cd01056 Euk_Ferritin eukaryotic ferritins

Probab=93.94  E-value=0.35  Score=43.41  Aligned_cols=110  Identities=21%  Similarity=0.255  Sum_probs=87.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      .++++.|.+.=..||..|++.|-+|+. .-|.++...++...         .....++...|-..-=.|.--...+..+.
T Consensus        36 l~g~a~~f~~~a~eE~~HA~~l~~~i~~rgg~~~~~~i~~~~---------~~~~~~~~e~l~~al~~E~~vt~~~~~l~  106 (161)
T cd01056          36 LPGFAKFFRKLSDEEREHAEKLIKYQNKRGGRVVLQDIKKPE---------KDEWGSGLEALELALDLEKLVNQSLLDLH  106 (161)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCC---------CcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 44455655544321         01224667777777778887778888899


Q ss_pred             HHHhhhCCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICGT-IASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+|++....+.. +=.++..|.+.+.++++.+-.+.
T Consensus       107 ~~A~~~~D~~t~~fl~~~fl~eQ~e~~~~~~~~l~~l~~~~  147 (161)
T cd01056         107 KLASEHNDPHLADFLESEFLEEQVESIKKLAGYITNLKRVG  147 (161)
T ss_pred             HHHhHcCCHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence            99988899999999997 99999999999999998865443

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged r

>PF13668 Ferritin_2: Ferritin-like domain

Probab=93.86  E-value=0.62  Score=40.27  Aligned_cols=98  Identities=17%  Similarity=0.104  Sum_probs=66.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCC--hHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVD--MKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvD--p~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      ++.....+..=...|..|-..|++-+.  |.-.  +..+.-        .+++..  ++...+.....-|..-...|...
T Consensus        37 ~~~~~~~~~~i~~~E~~H~~~l~~~l~--g~~~~~~~~~~~--------~~~~~~--~~~~~L~~A~~~E~~~~~~Y~g~  104 (137)
T PF13668_consen   37 DPEVRDLFQEIADQEQGHVDFLQAALE--GGRPVPPPAYDF--------PFDPFT--DDASFLRLAYTLEDVGVSAYKGA  104 (137)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCcccc--------ccCCCC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence            444555567778889999999999996  2221  111110        334432  44444444445566666667764


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVE  263 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~  263 (388)
                      +.   ...+|.+++++..|++.|.+|...++.++.
T Consensus       105 ~~---~~~~~~~~~~~~~i~~~Ea~H~~~ir~ll~  136 (137)
T PF13668_consen  105 AP---QIEDPELKALAASIAGVEARHAAWIRNLLG  136 (137)
T ss_pred             HH---HcCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44   467999999999999999999999998764

>PLN02492 ribonucleoside-diphosphate reductase

Probab=93.83  E-value=1.7  Score=43.62  Aligned_cols=116  Identities=16%  Similarity=-0.014  Sum_probs=67.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhH-------------HHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIE-------------RSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE-------------~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++...+...+.+.|+-|+.+-...+..-+ -|+...+             +....+.  ++.. ...+.+..++.-.+.
T Consensus        86 ~~E~~~~~~~q~~~E~iH~~sYs~i~~tl~-~d~~~~~~~f~~~~~~p~l~~K~~~~~--~~~~-~~~~~~~~lva~~~l  161 (324)
T PLN02492         86 VPEARAFYGFQIAIENIHSEMYSLLLDTYI-KDPKEKDRLFNAIETIPCVAKKADWAL--RWID-SSASFAERLVAFACV  161 (324)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHhCHHHHHHHHHHH--HHHh-hhHHHHHHHHHHHhh
Confidence            567778999999999999987654443211 1443311             1111111  1111 112445555544456


Q ss_pred             hhhhHHH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          218 ERATFIS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       218 E~AT~i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      |---+.+ +..+--+++.--=|-++++...|++||.+|-.|...++..+.+.-+
T Consensus       162 Egi~F~sgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~~~~  215 (324)
T PLN02492        162 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLKNKLS  215 (324)
T ss_pred             hHHhhhhhHHHHHHHHHcCCCcchHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC
Confidence            6532211 1112223222224778999999999999999999999999886544

>PRK13965 ribonucleotide-diphosphate reductase subunit beta; Provisional

Probab=93.56  E-value=4.7  Score=40.89  Aligned_cols=105  Identities=10%  Similarity=-0.029  Sum_probs=58.5

Q ss_pred             HHHHhhhhhhhhhhhHH----HHhHH--------hHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhH
Q 016490          155 ATWIRAWTAEENRHGDL----LNKYL--------YLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATF  222 (388)
Q Consensus       155 ~~W~~~WtAEEnRHG~a----Lr~YL--------~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~  222 (388)
                      ..+...+.++|+-|+.+    +..++        +-+-.-+ ..+.+..+ .+..-++.   .+++..+++.++.|-.-+
T Consensus       104 ~~~l~~q~~~E~IHs~sYs~il~tl~~~~~~~~~f~~~~~~-p~l~~K~~-~i~~~~~~---~~~~~~~va~~~lEGi~F  178 (335)
T PRK13965        104 QVIYTNFAFMVAIHARSYGTIFSTLCSSEQIEEAHEWVVST-ESLQRRAR-VLIPYYTG---DDPLKSKVAAAMMPGFLL  178 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhcC-HHHHHHHH-HHHHHHhc---CcHHHHHHHHHHHHHHHH
Confidence            56779999999999994    44442        1000011 11222222 22222332   256777777777775433


Q ss_pred             HH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          223 IS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       223 i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      -+ ...+--+++.--=|-++++...|.+||..|-.|..-++..
T Consensus       179 ysgFa~~~~L~~~gkM~g~~~~i~~I~RDE~lH~~~~~~l~~~  221 (335)
T PRK13965        179 YGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQQ  221 (335)
T ss_pred             HHHHHHHHHHhhcCCCccHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            21 1111123322234778999999999999999864444444

>PF02332 Phenol_Hydrox: Methane/Phenol/Toluene Hydroxylase; InterPro: IPR003430 Bacterial phenol hydroxylase (1

Probab=93.36  E-value=3.2  Score=39.81  Aligned_cols=145  Identities=18%  Similarity=0.122  Sum_probs=100.2

Q ss_pred             HHHHHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-Hh---cCCC---hHHhH
Q 016490          116 YFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LS---GRVD---MKQIE  188 (388)
Q Consensus       116 ~~v~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vs---grvD---p~~lE  188 (388)
                      +...+..-...|-++-....+++..-.        .+.|..-.---+..|.||...+.-++. ++   ...+   -...+
T Consensus        75 l~~~~~~~~~~E~ga~~~~a~~~r~~~--------~~~i~n~~~f~a~DelR~~q~~~~~~~~~~~~~~~~~~~~k~~w~  146 (233)
T PF02332_consen   75 LKRHLGPLRHAEYGAQMASAYIARFAP--------GTAIRNAATFQAMDELRHAQRQALLLKELAGAYPDFAGAAKEAWL  146 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-S--------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCCSCCCTHHHHH
T ss_pred             HHHHcCCcchHHHHHHHHHHHHHhhcC--------cHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhCcccChHHHHHHh
Confidence            344555566677777777777655443        567777777788899999998886665 32   2223   11111


Q ss_pred             -----HHHHHHHhcCCCCCCCCCchhhHHHHHhh-hh-hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          189 -----RSIQYLIRSGMDHKFENNPYNGFVYASFQ-ER-ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       189 -----~~~~~li~~G~~~~~~~~p~~~l~y~sfQ-E~-AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                           .-...++..-+-.   .++...++...|+ |. -|...+..+.+.|...||..+..|+..|-.||.||..-=..+
T Consensus       147 ~~p~wq~~R~~vE~~~~~---~Dw~E~~va~nlv~e~l~~~l~~~~~~~~A~~nGD~~~~~l~~~~q~d~~r~~~~~~al  223 (233)
T PF02332_consen  147 NDPAWQPLRRLVEDLLVT---YDWFEAFVALNLVFEPLFTNLLFVEFDRLAAANGDFLTPTLTSSIQSDEARHMRWGDAL  223 (233)
T ss_dssp             HSHHHHHHHHHHHHHTTS---SSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCchhHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 1122333332332   2677777777666 43 477888888889999999999999999999999999999999


Q ss_pred             HHHHHhhCCc
Q 016490          262 VEKLFEIDPD  271 (388)
Q Consensus       262 v~~~le~dpd  271 (388)
                      |+-+++-+|+
T Consensus       224 ~~~~~~~~~~  233 (233)
T PF02332_consen  224 FKMALEDDPN  233 (233)
T ss_dssp             HHHHHCTTTH
T ss_pred             HHHHHhCCCC
Confidence            9888887764

14.13.7 from EC) is a multicomponent enzyme that catabolises phenol and some of its methylated derivatives. This family contains both the P1 and P3 polypeptides of phenol hydroxlase and the alpha and beta chain of methane hydroxylase protein A. Methane hydroxylase protein A (1.14.13.25 from EC) is responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyses the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. Also included in this family is toluene-4-monooxygenase system protein A (1.14.13 from EC), which hydroxylates toluene to form P-cresol.; GO: 0006725 cellular aromatic compound metabolic process, 0055114 oxidation-reduction process; PDB: 3N20_B 3RNA_B 3N1X_B 3RNC_B 3RNG_B 3RNF_B 3N1Z_B 3RN9_B 3N1Y_B 3RNB_B ....

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=92.78  E-value=0.56  Score=40.68  Aligned_cols=96  Identities=21%  Similarity=0.283  Sum_probs=67.6

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH------hhCCchHHHHHHHHHhhccCCCCC
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF------EIDPDDTILALAGMMKKRFRMPGH  290 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l------e~dpd~t~~Aia~vm~~~i~MP~~  290 (388)
                      -|......|...++.|+.-|-+.++..+..+|.+|..|..-|.+.+..+-      ..+...+...|...+.        
T Consensus        12 ~E~~a~~~Y~~~a~~a~~~g~~~~a~~f~~~a~eE~~HA~~~~~~l~~l~g~~~~~~~~~~~~~~~l~~~~~--------   83 (134)
T cd01041          12 GESQARNRYTYFAEKARKEGYEQIARLFRATAENEKEHAKGHFKLLKGLGGGDTGPPIGIGDTLENLKAAIA--------   83 (134)
T ss_pred             hHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCcchHHHHHHHHHH--------
Confidence            46666677888899998899999999999999999999999988876631      1122333344444333        


Q ss_pred             cCCCCCC---cchhhhHHHHHHHhcCCChhh-HHHHHH
Q 016490          291 LMYDGQD---DKTFDHFSAVTQRLGVYTGQD-YADILE  324 (388)
Q Consensus       291 ~m~dg~~---~~lf~~~s~va~r~GvYt~~d-y~dIl~  324 (388)
                          +..   ...|..+..+|.+.|-++..+ ...|++
T Consensus        84 ----~E~~e~~~~y~~~~~~A~~e~d~~~~~~f~~i~~  117 (134)
T cd01041          84 ----GETYEYTEMYPEFAEVAEEEGFKEAARSFEAIAE  117 (134)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence                222   146778888888888887777 333543

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=92.77  E-value=0.85  Score=39.46  Aligned_cols=86  Identities=20%  Similarity=0.242  Sum_probs=66.8

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCcCCCCC
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQ  296 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~m~dg~  296 (388)
                      -|......|...++.|+..|.|-++.....+|..|..|...|.+++..    -|..+...|...+.            +.
T Consensus        12 ~E~~a~~~Y~~~a~~a~~eG~~~~A~~f~~~a~eE~~HA~~~~~~l~~----i~~~~~~~le~a~~------------~E   75 (123)
T cd01046          12 GETTEVGMYLAMARVAQREGYPEVAEELKRIAMEEAEHAARFAELLGK----VSEDTKENLEMMLE------------GE   75 (123)
T ss_pred             hHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----CcccHHHHHHHHHH------------hH
Confidence            466667778888999999999999999999999999999999997643    23566666666664            32


Q ss_pred             C--cchhhhHHHHHHHhcCCChhh
Q 016490          297 D--DKTFDHFSAVTQRLGVYTGQD  318 (388)
Q Consensus       297 ~--~~lf~~~s~va~r~GvYt~~d  318 (388)
                      .  ...|..+..++.+-|-|+..+
T Consensus        76 ~~~~~~~~~~~~~A~~egd~~~~~   99 (123)
T cd01046          76 AGANEGKKDAATEAKAEGLDEAHD   99 (123)
T ss_pred             HHHHHhHHHHHHHHHHcCCHHHHH
Confidence            2  133777889999999887776

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PRK09101 nrdB ribonucleotide-diphosphate reductase subunit beta; Reviewed

Probab=92.13  E-value=7.1  Score=40.21  Aligned_cols=35  Identities=29%  Similarity=0.252  Sum_probs=30.7

Q ss_pred             CHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh--hCCc
Q 016490          237 DMKLAQICGTIASDEKRHETAYTKIVEKLFE--IDPD  271 (388)
Q Consensus       237 dPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le--~dpd  271 (388)
                      =|-++++...|++||..|-.|...+++.+..  .+|+
T Consensus       225 m~g~~~~i~~I~RDE~lH~~~~~~l~~~l~~~~e~p~  261 (376)
T PRK09101        225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRSGKDDPE  261 (376)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccChh
Confidence            4668999999999999999999999999885  6665

>PRK13966 nrdF2 ribonucleotide-diphosphate reductase subunit beta; Provisional

Probab=92.13  E-value=9.8  Score=38.43  Aligned_cols=169  Identities=15%  Similarity=0.077  Sum_probs=93.7

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHHH-hh-hhcCCcccCCCCchhHHHH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTM-LN-SLDGVRDETGASLTSWATW  157 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~~-L~-~~~gvr~~~g~~~~~w~~W  157 (388)
                      ..-|-|.+ ||-+       ..+++|+    +||++-.-++.-.+--=-.+.+-+.. +. .+...     ...++-..+
T Consensus        33 ~nfW~peE-i~l~-------~D~~dw~----~Lt~~Ek~~~~~~L~fl~~~D~~~~~n~~~~~~~~-----~~~pe~~~~   95 (324)
T PRK13966         33 GNFWLPEK-VPVS-------NDIPSWG----TLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPD-----ALTPHEEAV   95 (324)
T ss_pred             hCCCCccc-cCcc-------chHHHHH----hCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHh-----cCCHHHHHH
Confidence            44788888 6552       2345563    47776555444222211133333331 11 11110     124556788


Q ss_pred             HhhhhhhhhhhhHHHHhHHhHhcCCChH-------------HhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHH
Q 016490          158 IRAWTAEENRHGDLLNKYLYLSGRVDMK-------------QIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFIS  224 (388)
Q Consensus       158 ~~~WtAEEnRHG~aLr~YL~vsgrvDp~-------------~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~  224 (388)
                      ...|.++|+-|+.+-..-+-.=  +++.             .+.+.. ..+..-|+.   .+++..+++-++.|..-+-+
T Consensus        96 ~~~q~~~E~IHsesYs~il~tl--~~~~~~~~~f~~~~~~~~l~~K~-~~i~~~~~~---~~~~~~~va~~~lEgi~Fys  169 (324)
T PRK13966         96 LTNIAFMESVHAKSYSQIFSTL--CSTAEIDDAFRWSEENRNLQRKA-EIVLQYYRG---DEPLKRKVASTLLESFLFYS  169 (324)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHhcCHHHHHHH-HHHHHHhcC---ChHHHHHHHHHHHhHHHHHH
Confidence            9999999999998754333311  1111             122222 222333443   24577778888888762221


Q ss_pred             -HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          225 -HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       225 -y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                       ....--+++.-.=|-++++...|.+||..|-.|...++...+...|+
T Consensus       170 gF~~~~~l~~~~km~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~  217 (324)
T PRK13966        170 GFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDD  217 (324)
T ss_pred             HHHHHHHHhhcCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCh
Confidence             11111122223356799999999999999999999999877665555

>PRK10304 ferritin; Provisional

Probab=91.95  E-value=4  Score=37.39  Aligned_cols=104  Identities=14%  Similarity=0.051  Sum_probs=78.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      .+.++.|.+.=..||-.|+..|-+|+.. -|++....+..-          +....++...|-..-=+|..-..++.++.
T Consensus        36 l~g~A~~f~~qs~EE~~HA~kl~~~i~~rgg~~~~~~i~~p----------~~~~~s~~e~~~~~l~~E~~vt~~i~~l~  105 (165)
T PRK10304         36 FEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESP----------FAEYSSLDELFQETYKHEQLITQKINELA  105 (165)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCCCC----------ccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999985 444443332211          11123666666666668888888899999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhh---hhHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASD---EKRHETAYTKIVEK  264 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaD---E~RH~~~Y~~iv~~  264 (388)
                      ++|...+|++....+..+-.+   |..|....-.-++.
T Consensus       106 ~~A~~~~D~~t~~fl~~fl~EQveEe~~~~~l~~~l~~  143 (165)
T PRK10304        106 HAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSL  143 (165)
T ss_pred             HHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999   77777665555543

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=91.82  E-value=0.42  Score=39.76  Aligned_cols=48  Identities=25%  Similarity=0.269  Sum_probs=42.2

Q ss_pred             hhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          216 FQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       216 fQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      -.|..+..+|...++   ..++|.++.++..||.||.+|...+..++..+-
T Consensus         8 ~~E~~~~~~Y~~~a~---~~~~~~~~~~~~~la~eE~~H~~~l~~~~~~~~   55 (139)
T cd01045           8 KMEEEAAEFYLELAE---KAKDPELKKLFEELAEEEKEHAERLEELYEKLF   55 (139)
T ss_pred             HHHHHHHHHHHHHHh---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            368888999998655   578999999999999999999999999998864

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=90.97  E-value=0.83  Score=36.09  Aligned_cols=51  Identities=29%  Similarity=0.232  Sum_probs=41.9

Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          213 YASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       213 y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      ....-|......|...+..   ..+|.+++++..++.||.+|...+.+++..+-
T Consensus         5 ~~~~~E~~a~~~y~~~~~~---~~~~~~~~~~~~~a~~E~~H~~~l~~~~~~~g   55 (130)
T cd00657           5 DALAGEYAAIIAYGQLAAR---APDPDLKDELLEIADEERRHADALAERLRELG   55 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3344677778888876664   45999999999999999999999999987753

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>PF05138 PaaA_PaaC: Phenylacetic acid catabolic protein; InterPro: IPR007814 This family includes proteins such as PaaA and PaaC that are part of a catabolic pathway of phenylacetic acid []

Probab=89.75  E-value=2.3  Score=41.85  Aligned_cols=157  Identities=16%  Similarity=0.122  Sum_probs=98.1

Q ss_pred             hhhhhhhhhhhHHHHhHHh-Hhc-CCChHHhHHHHHHHHhcCC------CCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          159 RAWTAEENRHGDLLNKYLY-LSG-RVDMKQIERSIQYLIRSGM------DHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       159 ~~WtAEEnRHG~aLr~YL~-vsg-rvDp~~lE~~~~~li~~G~------~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      .+=..+|..|+..|-.|+- +-| ..|++.+.-.+.   ...|      +.+. .+=...++...|.+++-.+.+..+..
T Consensus        53 ~~ia~DelGHAr~ly~ll~el~g~G~~~d~la~~R~---~~~~rn~~l~e~p~-~dwa~~v~r~~l~d~~~~~~l~~l~~  128 (263)
T PF05138_consen   53 ANIAQDELGHARLLYRLLEELEGEGRDEDDLAFLRD---AREFRNLLLFEQPN-GDWADTVARQFLFDRAGKVLLEALAD  128 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHCCCHHHHHHHHHHH---TTCS-SSGGGGS----SHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCChhHHHhhcc---cchhhhhhhhccCC-CCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3556789999999999986 323 235655544322   1222      2221 14456888888999998888887543


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh---hCCchHHHHHHHHHhhccCCCCCcCCCCCCcchhhhHHHH
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE---IDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAV  307 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le---~dpd~t~~Aia~vm~~~i~MP~~~m~dg~~~~lf~~~s~v  307 (388)
                          +.++.|+.++.+|-++|.-|..+-.+.|.++-.   .....+..||..+..-...|=|     -.+.      ...
T Consensus       129 ----ssy~pla~~a~k~~kEe~yH~~h~~~w~~rL~~gt~es~~r~q~Al~~~wp~~~elF~-----~~~~------~~~  193 (263)
T PF05138_consen  129 ----SSYEPLAAIAAKILKEEAYHLRHGEDWLRRLGDGTEESRERMQAALDRLWPYTLELFG-----PDDS------EEA  193 (263)
T ss_dssp             -----SBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHCC------S-HC------HHH
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC-----CCch------HHH
Confidence                679999999999999999999999999999883   3344566677777652222211     1111      123


Q ss_pred             HHHhcCCChhh-----HHHHHHHHHhhccccc
Q 016490          308 TQRLGVYTGQD-----YADILEFLIKRWGVEK  334 (388)
Q Consensus       308 a~r~GvYt~~d-----y~dIl~~ll~~W~v~~  334 (388)
                      +...|+-...+     +.+.+.+++...++.-
T Consensus       194 l~~~~~~~~~~~lr~~w~~~v~~~l~~~gL~~  225 (263)
T PF05138_consen  194 LAWGGRAPDNEELRQRWLAEVVPVLEEAGLEV  225 (263)
T ss_dssp             HHCTTSSS-HHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence            33344332222     6667888888887654

These proteins may form part of a dioxygenase complex.; PDB: 3PWQ_K 3PVT_B 1OTK_B 3PW1_B 3PW8_B 3PVR_B 3PVY_B 3Q1G_A 3PF7_B 3PM5_C ....

>PRK13456 DNA protection protein DPS; Provisional

Probab=89.07  E-value=16  Score=34.73  Aligned_cols=139  Identities=14%  Similarity=0.138  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHhhhc-cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-H--hcCCChHHhHH
Q 016490          114 AEYFVVLVGEMITE-EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-L--SGRVDMKQIER  189 (388)
Q Consensus       114 dd~~v~Lv~~~iTE-d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-v--sgrvDp~~lE~  189 (388)
                      +.++-.|.-++-+| .+.=-|...-..+.|+      ...+.+.++..=..||.+|++.|..=++ |  +.-.||..+..
T Consensus        19 ~~li~lLn~AlA~E~~a~~~Y~~~a~~~~G~------~~e~V~e~le~a~~EEl~HA~~lAeRI~qLGG~P~~~p~~~~~   92 (186)
T PRK13456         19 DKLVELLVKNAAAEFTTYYYYTILRAHLIGL------EGEGLKEIAEDARLEDRNHFEALVPRIYELGGKLPRDIREFHD   92 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHhh
Confidence            56666677666666 2333333333345554      4556778888888899999999987665 3  33446765443


Q ss_pred             HHHHHHhcCC-CCCCCCCchhhHHHHHh-hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHH
Q 016490          190 SIQYLIRSGM-DHKFENNPYNGFVYASF-QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVE  263 (388)
Q Consensus       190 ~~~~li~~G~-~~~~~~~p~~~l~y~sf-QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~  263 (388)
                          +..++| +++.+.+-+..++=..+ =|+..=..|+.+-+.+. -.||+=..|.-.|=+||..|+.-|.++++
T Consensus        93 ----ls~~~~~~~p~d~tdv~~mL~~~L~AEr~AI~~Y~eii~~~~-~kDp~T~~l~~~IL~dE~eH~~dl~~lL~  163 (186)
T PRK13456         93 ----ISACPDAYLPENPTDPKEILKVLLEAERCAIRTYTEICDMTA-GKDPRTYDLALAILQEEIEHEAWFSELLG  163 (186)
T ss_pred             ----hhcCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                556667 33321112455554444 47777778998888776 34999999999999999999999888764

>cd01043 DPS DPS protein, ferritin-like diiron-binding domain

Probab=88.26  E-value=6.9  Score=33.84  Aligned_cols=113  Identities=9%  Similarity=-0.014  Sum_probs=82.2

Q ss_pred             CCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHH
Q 016490          147 TGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       147 ~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      .|.+...+...+.....||..|.+.|..-+..-|..-....+....+........ ...+.-..+-...--|..+...|+
T Consensus        25 ~G~~f~~lh~~l~e~~~~~~~~~D~lAERi~~lgg~P~~~~~~~~~~s~l~~~~~-~~~~~~~~l~~~~~~~~~~i~~~~  103 (139)
T cd01043          25 KGPNFFALHELFEELYDELREAIDEIAERIRALGGKPLGTLKEYAELSTIKEEPA-GVLSAKEMVAELLEDYETLIEELR  103 (139)
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3456778888999999999999999999998656654444444433322221111 112445566666677888888899


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHH
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTK  260 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~  260 (388)
                      ...+.|...+|++.+.++..|-+++..|--++..
T Consensus       104 ~~i~~a~~~~D~~t~~ll~~il~~~ek~~w~l~a  137 (139)
T cd01043         104 EAIELADEAGDPATADLLTEIIRELEKQAWMLRA  137 (139)
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888887789999999999999999988776654

DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) disp

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=88.14  E-value=1.1  Score=39.60  Aligned_cols=52  Identities=13%  Similarity=-0.003  Sum_probs=39.8

Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          213 YASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       213 y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      -.+.-|.++...|-.-+...+ .++|.+++++..||.||.+|+..+.+++..+
T Consensus        23 ~g~~~E~~ai~~Y~y~~~~~~-~~~~~~k~~f~~lA~eE~~H~~~l~~~i~~l   74 (154)
T cd07908          23 AGTNSELTAISQYIYQHLISE-EKYPEIAETFLGIAIVEMHHLEILGQLIVLL   74 (154)
T ss_pred             CCcchHHHHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            334457777666665444433 4789999999999999999999999998773

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.87  E-value=3.7  Score=38.19  Aligned_cols=81  Identities=21%  Similarity=0.229  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCcCCCCCCcchh
Q 016490          222 FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTF  301 (388)
Q Consensus       222 ~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~m~dg~~~~lf  301 (388)
                      ..-|...|+.|+.-|.|.++.+...||-+|..|..-+.+++.++. .-...+..-+..++. .=.        +.....|
T Consensus        20 ~~rY~~~A~~A~~eG~~~va~lfr~iA~~E~~HA~~~~~~l~~~~-~~~~~~~eNl~~aie-GE~--------~e~~emy   89 (166)
T COG1592          20 VMRYLIFAKVAEEEGYPEIARLFRAIAEAEAVHAKNHLKLLGKLL-LVLGDTRENLEEAIE-GET--------YEITEMY   89 (166)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cccccHHHHHHHHHc-cch--------HHHHHhC
Confidence            445777777888899999999999999999999999999999877 222333444444443 000        1223455


Q ss_pred             hhHHHHHHHhc
Q 016490          302 DHFSAVTQRLG  312 (388)
Q Consensus       302 ~~~s~va~r~G  312 (388)
                      ..|+.+++.-|
T Consensus        90 p~~ae~A~~~g  100 (166)
T COG1592          90 PVFAEVAEEEG  100 (166)
T ss_pred             hHHHHHHHHcC
Confidence            56677777766

>cd01057 AAMH_A Aromatic and Alkene Monooxygenase Hydroxylase, subunit A, ferritin-like diiron-binding domain

Probab=86.36  E-value=12  Score=39.98  Aligned_cols=136  Identities=20%  Similarity=0.126  Sum_probs=83.1

Q ss_pred             hhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-Hh---cCCChHH--h-H----HHHH
Q 016490          124 MITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LS---GRVDMKQ--I-E----RSIQ  192 (388)
Q Consensus       124 ~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vs---grvDp~~--l-E----~~~~  192 (388)
                      ...|-+|=.-+.++.+...        ...+....---+.-|.||+...--|.. +.   ..+|...  . +    ....
T Consensus        87 ~~~Ey~a~~~~a~~~R~a~--------s~~irn~~~~qa~DelRhaQ~~~~~~~~l~k~~~GFd~~~~~~~~~~~~~~~R  158 (465)
T cd01057          87 TPGEYAAVRGMAMLGRFAP--------AAELRNGYLMQMLDELRHTQIQLYLPHYYAKNYAGFDWAQKAFHGNWYAGAAK  158 (465)
T ss_pred             cHHHHHHHHHHHHHHhhcC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHhhCcHHHHHH
Confidence            3445555555544433332        344666666777888888876554443 22   2233221  0 0    0011


Q ss_pred             HHHhcCCCCCCCCCchhhHHHHHh-hhh-hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          193 YLIRSGMDHKFENNPYNGFVYASF-QER-ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       193 ~li~~G~~~~~~~~p~~~l~y~sf-QE~-AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      ..+...+-.   .++...+++..| .|. -|...-..+++.|...||.++..|..-|-+||.||..-=...| .++..||
T Consensus       159 ~~~ed~~~t---~D~~E~~valnlvfE~~ftnl~~~~~~~~Aa~nGD~~tptv~~S~QsDe~Rh~~~g~~ll-~~l~~Dp  234 (465)
T cd01057         159 RFFFDGFIT---GDAVEAALALQFVFETAFTNLLFVALASDAAANGDYATPTVFLSIQSDEARHMANGYPTL-VLLENDP  234 (465)
T ss_pred             HHHHHHHhc---CCHHHHHHHHHhhHHHhhhHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhHHHHH-HHHHcCc
Confidence            222222221   255655555444 344 4666666677788889999999999999999999999999999 8888898


Q ss_pred             c
Q 016490          271 D  271 (388)
Q Consensus       271 d  271 (388)
                      +
T Consensus       235 ~  235 (465)
T cd01057         235 D  235 (465)
T ss_pred             c
Confidence            6

Aromatic and Alkene Monooxygenase Hydroxylases, subunit A (AAMH_A). Subunit A of the soluble hydroxylase of multicomponent, aromatic and alkene monooxygenases are members of a superfamily of ferritin-like iron-storage proteins. AAMH exists as a hexamer (an alpha2-beta2-gamma2 homodimer) with each alpha-subunit housing one nonheme diiron center embedded in a four-helix bundle. The N-terminal domain of the alpha- and noncatalytic beta-subunits possess nearly identical folds, however, the beta-subunit lacks critical diiron ligands and a C-terminal domain found in the alpha-subunit. Methane monooxygenase is a multicomponent enzyme found in methanotrophic bacteria that catalyzes the hydroxylation of methane and higher alkenes (as large as octane). Phenol monooxygenase, found in a diverse group of bacteria, catalyses the hydroxylation of phenol, chloro- and methyl-phenol and naphtho

>TIGR02029 AcsF magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase

Probab=85.45  E-value=1.5  Score=44.64  Aligned_cols=42  Identities=26%  Similarity=0.345  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          222 FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       222 ~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .+-|.-++|..+ ..+|+|+++.+..|+||+||..|--+.++.
T Consensus        89 flLYKEl~rrlk-~~~P~lae~F~~MaRDEARHAGFlNkam~d  130 (337)
T TIGR02029        89 FLLYKELSRRLK-NRDPVVAELFQLMARDEARHAGFLNKALGD  130 (337)
T ss_pred             hHHHHHHHHhcC-CCChHHHHHHHHHhhhhHHHhhhHHHHHHH
Confidence            455777777654 369999999999999999999998877766

This model respresents the oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under aerobic conditions. This enzyme is believed to utilize a binuclear iron center and molecular oxygen. There are two isoforms of this enzyme in some plants and cyanobacterai which are differentially regulated based on the levels of copper and oxygen. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under aerobic conditions (a separate enzyme, BchE, acts under anaerobic conditions). This enzyme is found in plants, cyanobacteria and other photosynthetic bacteria.

>cd07910 MiaE MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain

Probab=84.91  E-value=7.3  Score=36.73  Aligned_cols=110  Identities=18%  Similarity=0.214  Sum_probs=76.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcC----CChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGR----VDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr----vDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      .+++..=+..=.-||.+|=.-..+-+.--|.    ..+...-.....+++.| +|   .--+..|+..++.|.   =||-
T Consensus        47 ~~~Lv~~m~~LarEEL~HFeqV~~im~~Rgi~l~~~~~~~Ya~~L~k~vR~~-~p---~~llD~Llv~alIEA---RScE  119 (180)
T cd07910          47 KPELVEAMSDLAREELQHFEQVLKIMKKRGIPLGPDSKDPYASGLRKLVRKG-EP---ERLLDRLLVAALIEA---RSCE  119 (180)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcccC-Ch---HHHHHHHHHHHHHHH---HhHH
Confidence            4555555666778999997777666654332    12222222223333332 22   244678999999984   4677


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      ..+.+|....|+.|++....+..-|+|||.-|.++-..+++
T Consensus       120 RF~lLa~~l~D~eL~~FY~~Ll~SEarHy~~yl~LA~~y~~  160 (180)
T cd07910         120 RFALLAPALPDPELKKFYRGLLESEARHYELFLDLARKYFD  160 (180)
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence            77888876689999999999999999999999999999886

MiaE is a nonheme diiron monooxygenase that catalyzes the posttranscriptional allylic hydroxylation of a modified nucleoside in tRNA called 2-methylthio-N-6-isopentenyl adenosine (ms2i6A). ms2i6A is found at position 37, next to the anticodon at the 3' position in almost all eukaryotic and bacterial tRNA's that read codons beginning with uridine. The miaE gene is absent in Escherichia coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=84.38  E-value=13  Score=31.88  Aligned_cols=99  Identities=14%  Similarity=0.107  Sum_probs=58.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      ++.-..-...=..+|-+|...+++++---|..-+..-.+...+.+-..+.     ++...+-..--.|..+-.+|..++.
T Consensus        26 ~~~~k~~f~~lA~~E~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~~l~~~~~~E~~ai~~Y~~~~~  100 (125)
T cd01044          26 DPENREILLKLAEDERRHAEFWKKFLGKRGVPPPRPKLKIFFYKLLARIF-----GPTFVLKLLERGEERAIEKYDRLLE  100 (125)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHH-----hHHHHHHHHHHhHHhhHhhHHhhhh
Confidence            34455556667788999999999998643332211111111111111110     1111222222368889999998655


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHH
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVE  263 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~  263 (388)
                      .         ..++.+|..||..|+.-+.++.+
T Consensus       101 ~---------~~~~~~Ii~dE~~H~~~L~~~~~  124 (125)
T cd01044         101 E---------RPELKEIIADELEHEEVLIALLD  124 (125)
T ss_pred             h---------hHHHHHHHHHHHHHHHHHHHhhh
Confidence            3         55778899999999998887754

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional

Probab=84.32  E-value=15  Score=42.52  Aligned_cols=152  Identities=17%  Similarity=0.097  Sum_probs=101.8

Q ss_pred             HHHHhhcCCCHHHHHHHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCC
Q 016490          104 ELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVD  183 (388)
Q Consensus       104 ~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvD  183 (388)
                      +|-.+.+-=.+-..-+|..++-.|...=.|-+.++.--.        +..-......=..||.+|-+.|.+.+--   ..
T Consensus       849 ~~~~~~~~~~~~~~eil~~Ai~mE~~g~~FY~~~A~~a~--------~~~~K~lF~~LA~eE~~H~~~l~~~~~~---~~  917 (1006)
T PRK12775        849 QALDRRKVEDAAALEAIRTAFEIELGGMAFYARAAKETS--------DPVLKELFLKFAGMEQEHMATLARRYHA---AA  917 (1006)
T ss_pred             hhhhccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHHHHHHHHHHhh---cc
Confidence            333333333355666788888889887777777765543        6677778888889999999998777631   11


Q ss_pred             hHHhHHH-HH-HHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCH-HHHHHHhHhhhhhhHHHHHHHH
Q 016490          184 MKQIERS-IQ-YLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDM-KLAQICGTIASDEKRHETAYTK  260 (388)
Q Consensus       184 p~~lE~~-~~-~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdP-vLa~I~~~IAaDE~RH~~~Y~~  260 (388)
                      |..-+.+ .. ...-.++... ..++...+-+..-.|..+-.+|..+++   .+.|+ ..++|+..||.-|..|.....+
T Consensus       918 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~lAm~~Ekdai~fY~~la~---~~~d~e~~k~l~~~LA~EEk~Hl~~L~~  993 (1006)
T PRK12775        918 PSPTEGFKIERAAIMAGVKGR-PDDPGNLFRIAIEFERRAVKFFKERVA---ETPDGSVERQLYKELAAEEREHVALLTT  993 (1006)
T ss_pred             CCcccccccchhhhhhhhccc-cCCHHHHHHHHHHHHHHHHHHHHHHHh---hCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111110 00 0111112111 235667777778899999999998665   56787 5899999999999999999999


Q ss_pred             HHHHHHhhCC
Q 016490          261 IVEKLFEIDP  270 (388)
Q Consensus       261 iv~~~le~dp  270 (388)
                      .++++-+-.|
T Consensus       994 ~~d~~~~~~~ 1003 (1006)
T PRK12775        994 EFERWKQGKP 1003 (1006)
T ss_pred             HHHHHhccCC
Confidence            9988765443

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=84.21  E-value=3.2  Score=38.55  Aligned_cols=61  Identities=20%  Similarity=0.168  Sum_probs=50.3

Q ss_pred             CchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          206 NPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       206 ~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      +....+.+.--.|..---+|..+++.   ..|+.++++...||.||.+|..-|.+++.+....+
T Consensus        24 ~~~e~L~~Ai~~E~eA~~fY~~lae~---~~~~~~rk~~~~la~eE~~H~~~f~~l~~~~~~~~   84 (176)
T COG1633          24 SIEELLAIAIRGELEAIKFYEELAER---IEDEEIRKLFEDLADEEMRHLRKFEKLLEKLTPKE   84 (176)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHh---cCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            44566777777888888899986664   67999999999999999999999999988754433

>PF04305 DUF455: Protein of unknown function (DUF455); InterPro: IPR007402 This is a family of uncharacterised proteins

Probab=83.91  E-value=20  Score=35.28  Aligned_cols=49  Identities=22%  Similarity=0.180  Sum_probs=43.9

Q ss_pred             hhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHh
Q 016490          234 EHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMK  282 (388)
Q Consensus       234 ~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~  282 (388)
                      ..||...+.|+..|-.||..|-++=.+-++.+-+..+.+....+...+.
T Consensus       177 ~~gD~~sa~iL~~I~~DEi~HV~~G~rWf~~~c~~~~~~p~~~f~~lv~  225 (253)
T PF04305_consen  177 SAGDEESAAILEIILRDEIGHVAIGNRWFRYLCEQRGLDPWETFRELVR  225 (253)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHHHHHHHHHH
Confidence            4799999999999999999999998888888888888777888988886

>cd00904 Ferritin Ferritin iron storage proteins

Probab=83.78  E-value=7.8  Score=34.85  Aligned_cols=107  Identities=19%  Similarity=0.234  Sum_probs=79.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|.+.=..||-.|+..|-+|+. .-|++....+....    ...|     .++...|-..-=.|..-...+.++.
T Consensus        36 l~g~a~~f~~~s~eE~~HA~~l~~yi~~rgg~~~l~~i~~~~----~~~~-----~~~~e~~e~al~~Ek~v~~~i~~l~  106 (160)
T cd00904          36 LKGVAHFFKEQAQEEREHAEKFYKYQNERGGRVELQDIEKPP----SDEW-----GGTLDAMEAALKLEKFVNQALLDLH  106 (160)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCcCCCCc----cccc-----CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 44455544444321    0011     3566667666678888888888899


Q ss_pred             HHHhhhCCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGT-IASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      ++|...+|++....+.. .=.+-..-.+-+.+++..+-
T Consensus       107 ~~A~~~~D~~t~~fl~~~fi~eQ~ee~~~~~~~l~~l~  144 (160)
T cd00904         107 ELASEEKDPHLCDFLESHFLDEQVKEIKQVGDILTNLE  144 (160)
T ss_pred             HHHHHCCCHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Confidence            99988899999998887 76676777777777776543

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary rol

>cd01047 ACSF Aerobic Cyclase System Fe-containing subunit (ACSF), ferritin-like diiron-binding domain

Probab=82.53  E-value=2.3  Score=43.04  Aligned_cols=44  Identities=23%  Similarity=0.317  Sum_probs=34.9

Q ss_pred             hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          220 ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       220 AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .-.+-|.-++|..+.. +|+|+++.+..|+||+||..|--+.++.
T Consensus        77 SGflLYKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkam~d  120 (323)
T cd01047          77 SGFLLYKELGRRLKNT-NPVVAELFRLMARDEARHAGFLNKALSD  120 (323)
T ss_pred             hhHHHHHHHHHHcccC-CcHHHHHHHHHhhhHHHHhhhHHHHHHH
Confidence            3355677777765433 7999999999999999999998877765

Aerobic Cyclase System, Fe-containing subunit (ACSF) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrivivax gelatinosus acsF codes for a conserved, putative binuclear iron-cluster-containing protein involved in aerobic oxidative cyclization of Mg-protoporphyrin IX monomethyl ester. AcsF and homologs have a leucine zipper and two copies of the conserved glutamate and histidine residues predicted to act as ligands for iron in the Ex(29-35)DExRH motifs. Several homologs of AcsF are found in a wide range of photosynthetic organisms, including Chlamydomonas reinhardtii Crd1 and Pharbitis nil PNZIP, suggesting that this aerobic oxidative cyclization mechanism is conserved from bacteria to plants.

>cd01048 Ferritin_like_AB2 Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=82.40  E-value=6.6  Score=34.55  Aligned_cols=92  Identities=13%  Similarity=0.156  Sum_probs=62.7

Q ss_pred             hhhhhhhhHHHHhHHhHhcCCChHHhH---H---H-HHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhh
Q 016490          162 TAEENRHGDLLNKYLYLSGRVDMKQIE---R---S-IQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKE  234 (388)
Q Consensus       162 tAEEnRHG~aLr~YL~vsgrvDp~~lE---~---~-~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~  234 (388)
                      ..+|.+|-+.|..-+---+--+|..-.   .   . ...++..|.     .+....+-..+-.|...--+|..+++   .
T Consensus        36 a~~E~~H~~~l~~L~~~~~~~~p~~~~~~~~f~~~~~~~l~~~~~-----~s~~~al~~g~~~E~~~i~~ye~~~~---~  107 (135)
T cd01048          36 AESEQRHMDALKTLLERYGLPDPVDPFSGGVFTNPQYNQLVEQGP-----KSLQDALEVGVLIEELDIADYDRLLE---R  107 (135)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCCccccccccchhHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHHHHHH---h
Confidence            478999999998887632222222110   0   0 001111211     24566777778889999999998544   6


Q ss_pred             hCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          235 HGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       235 ~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      +.||.+++++.+++.-|..|+..|.+-
T Consensus       108 ~~d~d~k~v~~~L~~~e~~H~~~f~~~  134 (135)
T cd01048         108 TQNPDIRDVFENLQAASRNHHLPFFRR  134 (135)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            789999999999999999999988763

Ferritin-like domain found in archaea and bacteria, subgroup 2 (Ferritin_like_AB2). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. The conserved residues of a diiron center are present within the putative active site.

>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional

Probab=82.37  E-value=2.4  Score=43.30  Aligned_cols=42  Identities=24%  Similarity=0.245  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          222 FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       222 ~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .+-|.-++|..+ ..+|+|+++.+..|+||+||..|--+.++.
T Consensus        95 flLYKEl~rrlk-~~nP~lae~F~lMaRDEARHAGFlNkam~d  136 (351)
T CHL00185         95 FLLYKELSRKLK-DKNPLLAEGFLLMSRDEARHAGFLNKAMSD  136 (351)
T ss_pred             hHHHHHHHHHhc-cCCcHHHHHHHHHhhhhHHHhhhHHHHHHH
Confidence            455777777654 247999999999999999999998887776

>PRK13654 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional

Probab=81.82  E-value=2.5  Score=43.32  Aligned_cols=42  Identities=26%  Similarity=0.366  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          222 FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       222 ~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .+-|.-++|..+. .+|.|+++.+..|+||+||..|--+.++.
T Consensus        99 flLYKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkam~d  140 (355)
T PRK13654         99 FLLYKELSRRLKD-RNPLLAELFQLMARDEARHAGFLNKAMKD  140 (355)
T ss_pred             HHHHHHHHHhccc-cCcHHHHHHHHHhhhHHHHhhhHHHHHHH
Confidence            4457777776543 38999999999999999999998887766

>PLN02508 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase

Probab=81.01  E-value=2.3  Score=43.57  Aligned_cols=42  Identities=24%  Similarity=0.326  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          222 FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       222 ~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .+-|..++|..+. .+|+|+++.+..|+||+||..|--+.++.
T Consensus        95 flLYKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkam~D  136 (357)
T PLN02508         95 FLLYKELGRRLKK-TNPVVAEIFTLMSRDEARHAGFLNKALSD  136 (357)
T ss_pred             chHHHHHHHhccc-CChHHHHHHHHhCchhHHHHhHHHHHHHH
Confidence            4557777775542 47999999999999999999998888776

>cd01058 AAMH_B Aromatic and Alkene Monooxygenase Hydroxylase, subunit B, ferritin-like diiron-binding domain

Probab=80.44  E-value=27  Score=35.02  Aligned_cols=117  Identities=15%  Similarity=0.122  Sum_probs=75.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCC-ChHHhHHH------------HHHHHhcCCCCCCCCCchhhHHHHHh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRV-DMKQIERS------------IQYLIRSGMDHKFENNPYNGFVYASF  216 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrv-Dp~~lE~~------------~~~li~~G~~~~~~~~p~~~l~y~sf  216 (388)
                      .+.+....---+.-|.||+.-+-.|.. +++.. ++. ....            ...++...+-.   .++...++...|
T Consensus       128 ~~~i~n~~~~qa~D~lR~aQ~~~~~~~~l~~~~~~~~-~~~~k~~W~~dp~Wq~~R~~~E~~~~~---~Dw~E~~va~nl  203 (304)
T cd01058         128 STTITNAAAFQAMDKLRIAQDIAYRGLELDGNTPGFD-GDAAKEAWEEDPAWQGLRELVEKLLVT---YDWGEAFVAQNL  203 (304)
T ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccCCCCC-chHHHHHHhcCchhHHHHHHHHHHHhh---ccHHHHHHHHHH
Confidence            345666666677888888888776653 44432 220 1111            11122221111   145555555444


Q ss_pred             h-h-hhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          217 Q-E-RATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       217 Q-E-~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      + | .-|...+..+.+.|...||..+..|..-+-.||.||..-=..+|+-+++-+|+
T Consensus       204 v~e~l~~~l~~~~~~~~Aa~nGD~~t~~l~~s~q~d~~Rh~~~~~alvk~l~~~~~~  260 (304)
T cd01058         204 VFDPLVGELVRRELDRLAASNGDTLTPLLTEFMLDDAQRHRRWTDALVKTAAEDSPH  260 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHccChh
Confidence            2 3 34667777788888889999999999999999999999999999977776565

Aromatic and Alkene Monooxygenase Hydroxylases, subunit B (AAMH_B). Subunit B (beta) of the soluble hydroxylase of multicomponent, aromatic and alkene monooxygenases are members of a superfamily of ferritin-like iron-storage proteins. AAMH exists as a hexamer (an alpha2-beta2-gamma2 homodimer) with each alpha-subunit housing one nonheme diiron center embedded in a four-helix bundle. The N-terminal domain of the alpha- and noncatalytic beta-subunits possess nearly identical folds; the beta-subunit lacks the C-terminal domain found in the alpha-subunit. Methane monooxygenase is a multicomponent enzyme found in methanotrophic bacteria that catalyzes the hydroxylation of methane and higher alkenes (as large as octane). Phenol monooxygenase, found in a diverse group of bacteria, catalyses the hydroxylation of phenol, chloro- and methyl-phenol and naphthol. Both enzyme systems consis

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
1oq4_A	363	The Crystal Structure Of The Complex Between Stearo		1e-153
1afr_A	345	Stearoyl-Acyl Carrier Protein Desaturase From Casto		1e-153
2j2f_A	363	The T199d Mutant Of Stearoyl Acyl Carrier Protein D		1e-152
2uw1_A	338	Ivy Desaturase Structure Length = 338		1e-137
2uw1_B	338	Ivy Desaturase Structure Length = 338		1e-135
1za0_A	275	X-Ray Structure Of Putative Acyl-Acp Desaturase Des		2e-06

>pdb|1OQ4|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl Carrier Protein Desaturase From Ricinus Communis (Castor Bean) And Azide. Length = 363

Iteration: 1
 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 292/340 (85%), Gaps = 4/340 (1%)
Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 28  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 86
Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 87  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 146
Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFISHGNT
Sbjct: 147 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNT 206
Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 207 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 266
Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 267 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 326
Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 327 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 363

>pdb|1AFR|A Chain A, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds Length = 345

Iteration: 1
 Score =  536 bits (1381), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 292/340 (85%), Gaps = 4/340 (1%)
Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 10  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 68
Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 69  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 128
Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFISHGNT
Sbjct: 129 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNT 188
Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 189 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 248
Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 249 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 308
Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 309 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 345

>pdb|2J2F|A Chain A, The T199d Mutant Of Stearoyl Acyl Carrier Protein Desaturase From Ricinus Communis (Castor Bean) Length = 363

Iteration: 1
 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 250/340 (73%), Positives = 291/340 (85%), Gaps = 4/340 (1%)
Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 28  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 86
Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 87  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 146
Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERA FISHGNT
Sbjct: 147 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERADFISHGNT 206
Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 207 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 266
Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 267 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 326
Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 327 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 363

>pdb|2UW1|A Chain A, Ivy Desaturase Structure Length = 338

Iteration: 1
 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 226/340 (66%), Positives = 276/340 (81%), Gaps = 4/340 (1%)
Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WA +NVLIHLK V+KSWQP D+LP+   S+GF EQV+ELRER
Sbjct: 3   VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDP-VSDGFEEQVRELRER 61
Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTY +MLN  DG++DETGA  ++WA W RAWTAEENRH
Sbjct: 62  AKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRH 121
Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM++IE++IQYLI SGMD K EN+PY GF+Y SFQERATFISH NT
Sbjct: 122 GDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANT 181
Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           A+L + +GD KLA ICG+IASDEKRH TAYTKIVEKL EIDPD T++A A MM+K+  MP
Sbjct: 182 AKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMP 241
Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG D+  F HF+AV QRLGVY+  DY DILEFL+ +W VE+L GL+ EGRKAQ++
Sbjct: 242 AHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEY 301
Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC L  +IRR LE +A      K    +PFSW+F +++++
Sbjct: 302 VCELGPKIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 338

>pdb|2UW1|B Chain B, Ivy Desaturase Structure Length = 338

Iteration: 1
 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/340 (65%), Positives = 274/340 (80%), Gaps = 4/340 (1%)
Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WA +NVLIHLK V+KSWQP D+LP+   S+GF EQV+ELRER
Sbjct: 3   VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDP-VSDGFEEQVRELRER 61
Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTY +MLN  DG++DETGA  ++WA W RAWTAEENRH
Sbjct: 62  AKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRH 121
Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM++IE++IQYLI SGMD K EN+PY GF+Y SFQERATFISH NT
Sbjct: 122 GDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANT 181
Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           A+L +  GD  LA ICG+IASDEKRH TAYTKIVEKL EIDPD T++A A MM+K+  MP
Sbjct: 182 AKLAQHWGDKNLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMP 241
Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG D+  F HF+AV QR+GVY+  DY DILEFL+ +W VE+L GL+ EGRKAQ++
Sbjct: 242 AHLMYDGSDELLFKHFTAVAQRVGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEY 301
Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC L  +IRR LE +A      K    +PFSW+F +++++
Sbjct: 302 VCELGPKIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 338

>pdb|1ZA0|A Chain A, X-Ray Structure Of Putative Acyl-Acp Desaturase Desa2 From Mycobacterium Tuberculosis H37rv Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 154 WATWIRAWTAEENRHGDLLNKYLYLSGRVD-MKQIERSIQYLIRSGMDHKFENNPYNGFV 212
           W  W+  WTAEE+ H   L +YL ++  VD +   +  +Q++++     K+        V
Sbjct: 96  WGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKY--TQVETLV 153
Query: 213 YASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD 272
           Y +F ER   +   N A  ++E     LA +   IA DE RHE  +  +V    +   D+
Sbjct: 154 YMAFYERCGAVFCRNLAAQIEE---PILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDE 210
Query: 273 T 273
           T
Sbjct: 211 T 211

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
2uw1_A	338	Desaturase, plastid delta4 multifunctional acyl-AC	1e-153
1za0_A	275	Possible acyl-[acyl-carrier protein] desaturase D	1e-112
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A Length = 338

 Score =  433 bits (1115), Expect = e-153
 Identities = 224/340 (65%), Positives = 274/340 (80%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WA +NVLIHLK V+KSWQP D+LP+   S+GF EQV+ELRER
Sbjct: 3   VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDPV-SDGFEEQVRELRER 61

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTY +MLN  DG++DETGA  ++WA W RAWTAEENRH
Sbjct: 62  AKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRH 121

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM++IE++IQYLI SGMD K EN+PY GF+Y SFQERATFISH NT
Sbjct: 122 GDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANT 181

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           A+L + +GD KLA ICG+IASDEKRH TAYTKIVEKL EIDPD T++A A MM+K+  MP
Sbjct: 182 AKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMP 241

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG D+  F HF+AV QRLGVY+  DY DILEFL+ +W VE+L GL+ EGRKAQ++
Sbjct: 242 AHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEY 301

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC L  +IRR+ E         K    +PFSW+F +++++
Sbjct: 302 VCELGPKIRRLEERAQ---GRAKEAPTMPFSWIFDRQVKL 338

>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2 Length = 275

 Score =  329 bits (844), Expect = e-112
 Identities = 61/298 (20%), Positives = 99/298 (33%), Gaps = 25/298 (8%)

Query: 52  SMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQ 111
           +  P    +   LE   E N+  HL   +  W   D++P  +     F   ++       
Sbjct: 2   AQKPVADALTLELEPVVEANMTRHL-DTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQST 60

Query: 112 LPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDL 171
           LP          +I ++ L  +   L     + D        W  W+  WTAEE+ H   
Sbjct: 61  LPRTITDACEILLILKDNLAGHHRELVEHFILEDW-------WGRWLGRWTAEEHLHAIA 113

Query: 172 LNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARL 231
           L +YL ++  VD    E      +  G     +       VY +F ER   +   N A  
Sbjct: 114 LREYLVVTREVDPVANEDVRVQHVMKGYRA-EKYTQVETLVYMAFYERCGAVFCRNLAAQ 172

Query: 232 VKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHL 291
                +  LA +   IA DE RHE  +  +V    +   D+TI A+A        + G  
Sbjct: 173 ---IEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAAD-LDVLGAD 228

Query: 292 MYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFV 349
           +        +          G++       ++   I  WG+        E    Q   
Sbjct: 229 IEA------YRDKLQNVADAGIFGKPQLRQLISDRITAWGLA------GEPSLKQFVT 274

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 51/350 (14%), Positives = 102/350 (29%), Gaps = 115/350 (32%)

Query: 100 EQVKELRERCKQLPAEYFVVLVGEM-------ITEEALPTYQTMLNSLDGVRDETGASLT 152
           +   +LR+   +L     V++ G +       +  +   +Y+        +         
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDG-VLGSGKTWVALDVCLSYKVQCKMDFKI--------- 184

Query: 153 SWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIER-----SIQYLIRSGMDHK---FE 204
               W+       N    +L     L  ++D     R     +I+  I S         +
Sbjct: 185 ---FWLNL--KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 205 NNPY-----------NGFVYASF------------QERATFISHGNTARLVKEHGDMKLA 241
           + PY           N   + +F            ++   F+S   T  +  +H  M L 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 242 QICGTIASDEKRHETAYTKIVEKLFEIDPDD------TILALA-GMMKKRFR-MPG---- 289
                   DE +       ++ K  +  P D      T       ++ +  R        
Sbjct: 300 P-------DEVK------SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 290 --HLMYDGQD---DKTFDHFSAVTQR-----LGVYTGQDYADI----LEFLIKRWG---- 331
             H+  D      + + +       R     L V+     A I    L  +   W     
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF--PPSAHIPTILLSLI---WFDVIK 401

Query: 332 ------VEKLVGLTSEGRKAQDFVCGLPS---RIRRILEN-----KALVD 367
                 V KL   +   ++ ++    +PS    ++  LEN     +++VD
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
2uw1_A	338	Desaturase, plastid delta4 multifunctional acyl-AC	100.0
1za0_A	275	Possible acyl-[acyl-carrier protein] desaturase D	100.0
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	97.33
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	97.18
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	97.18
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	97.13
2rcc_A	346	Ribonucleoside-diphosphate reductase subunit beta;	97.1
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	97.09
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	97.09
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	97.08
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	97.0
1syy_A	346	Ribonucleoside-diphosphate reductase beta chain; D	96.97
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	96.94
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	96.92
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	96.89
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	96.85
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	96.76
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	96.64
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	96.57
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	96.57
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	96.55
4a58_A	324	Ribonucleoside-diphosphate reductase small chain;	96.54
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	96.48
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	96.42
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	96.36
3uno_A	189	Probable bacterioferritin BFRB; ferroxidase activi	96.36
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	96.33
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	96.32
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	96.3
2o1z_A	311	Ribonucleotide reductase subunit R2; small subunit	96.12
3mjo_A	296	Ribonucleotide reductase subunit R2F; Mn ribonucle	96.02
3ee4_A	323	Probable ribonucleoside-diphosphate reductase; man	96.01
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	95.99
3qz3_A	184	Ferritin; structural genomics, the center for stru	95.97
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	95.9
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	95.82
2fzf_A	175	Hypothetical protein; structural genomics, southea	95.77
3dhz_A	329	Ribonucleotide reductase subunit R2F; metal free,	95.72
3n37_A	319	Ribonucleoside-diphosphate reductase 2 subunit BE;	95.65
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	95.61
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	95.59
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	95.54
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	95.49
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	95.41
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	95.2
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	95.09
1mxr_A	375	Ribonucleotide reductase R2; radical protein, DI i	94.96
1o9i_A	266	Pseudocatalase; oxidoreductase, hexamer, dimangane	94.81
1ji5_A	142	DLP-1; dodecamer, four-helix bundle, metal transpo	94.8
1jk0_A	419	RNR Y2, ribonucleoside-diphosphate reductase small	94.49
1jig_A	146	DLP-2; dodecamer, four-helix bundle, metal transpo	94.48
1n1q_A	149	DPS protein; four-helix bundle, unknown function;	94.44
2p1i_A	349	Ribonucleotide reductase, small chain; F222 twinni	94.33
2vxx_A	192	Starvation induced DNA binding protein; stress res	94.24
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	94.23
1h0o_A	390	Ribonucleoside-diphosphate reductase; oxidoreducta	94.21
2v8t_A	302	Manganese-containing pseudocatalase; manganese cat	94.01
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	93.98
2inc_A	491	Toluene, O-xylene monooxygenase oxygenase subunit;	93.93
1mty_D	512	Methane monooxygenase hydroxylase; dinuclear iron	93.53
4dr0_A	350	Ribonucleoside-diphosphate reductase subunit beta;	93.53
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	93.43
3olj_A	286	Ribonucleoside-diphosphate reductase subunit M2; m	93.25
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	93.17
3chh_A	336	P-aminobenzoate N-oxygenase; DI-iron oxygenase, ox	93.02
2fzf_A	175	Hypothetical protein; structural genomics, southea	92.59
2d5k_A	156	DPS, DPS family protein; four helix bundle, metal	92.42
3pvt_A	311	Phenylacetic acid degradation protein PAAA; protei	92.24
1jk0_B	345	RNR Y4, ribonucleoside-diphosphate reductase small	92.15
3k6c_A	95	Uncharacterized protein NE0167; structural genomic	92.09
2c41_A	158	DPS family DNA-binding stress response protein; ir	91.77
1tjo_A	182	Iron-rich DPSA-homolog protein; ferritin, low-iron	90.55
2clb_A	188	DPS-like protein; DI-iron carboxylate, hypothetica	89.2
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	88.31
1zpy_A	95	Hypothetical protein NE0167; structural genomics,	87.93
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	86.68
2bk6_A	156	Non-heme iron-containing ferritin; DPS (DNA bindin	84.9
2e0z_A	345	Virus-like particle; bacteriophage, HK97; 3.60A {P	83.88
2itb_A	206	TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative	83.77
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	83.45
3u52_A	511	Phenol hydroxylase component PHN; 4-helix bundle,	83.45
2inc_B	322	Toluene, O-xylene monooxygenase oxygenase subunit;	82.69
2wlu_A	175	DPS-like peroxide resistance protein; DNA-binding,	82.25
2xgw_A	199	Peroxide resistance protein; metal binding protein	81.13
2chp_A	153	MRGA, metalloregulation DNA-binding stress protein	81.05
2cf7_A	165	DPR; peroxide resistance, DPS-family, ferritin-lik	80.38

>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A

Probab=100.00  E-value=3.9e-125  Score=930.54  Aligned_cols=338  Identities=67%  Similarity=1.139  Sum_probs=320.5

Q ss_pred             ccccCCCCchhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhh
Q 016490           47 DVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMIT  126 (388)
Q Consensus        47 ~~~~~~~~~~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iT  126 (388)
                      +|++|||+++|+|||++||+||++||++||||++++||||||||| ++|+||+++|++|||+|++|||++++|||+||||
T Consensus         1 ~~~~~~~~~~~~e~~~~Le~~~~~~~~~hL~p~~~~Wqp~D~lPw-~~~~~F~~~~~~~~~~~~~l~d~~~v~lv~~~iT   79 (338)
T 2uw1_A            1 MQVTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPD-PVSDGFEEQVRELRERAKEIPDDYFVVLVGDMIT   79 (338)
T ss_dssp             -----------CHHHHHTHHHHHHHTGGGSCCGGGCCCGGGGSCC-TTSTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred             CcccccCCHHHHHHHHHHHHHHHHHHHHHhhhHhhcCCchhcCCC-ccccchhhhcccccHhhccCCHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999999999999999 6999999999999999999999999999999999


Q ss_pred             ccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCC
Q 016490          127 EEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENN  206 (388)
Q Consensus       127 Ed~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~  206 (388)
                      |||||+||++||++||+|+++|+++++|++|+++|||||||||++||+||++||+|||+++|++++++|.+||+++.+++
T Consensus        80 Ed~LPtY~~~L~~~fgvrd~~g~~~~~w~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~~~~~i~~Gfd~~~~~~  159 (338)
T 2uw1_A           80 EEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENS  159 (338)
T ss_dssp             HHTHHHHHHHHTTSTTTSCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHCCCCCCTTC
T ss_pred             hhcchHHHHHHHHHcCcccccCCCcchHHHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             chhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccC
Q 016490          207 PYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFR  286 (388)
Q Consensus       207 p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~  286 (388)
                      |+++|+|+||||+||++||+||+++|+++|||||++||++||+||+||++||+++|+++|++||+++|.||++||+++|+
T Consensus       160 p~~~~vy~sfQE~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~~~le~dpd~~~~Aia~vm~~~~~  239 (338)
T 2uw1_A          160 PYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKIT  239 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988999


Q ss_pred             CCCCcCCCCCCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCHHHHHHHHHHhcchHHHHHHHHHhhhh
Q 016490          287 MPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENKALV  366 (388)
Q Consensus       287 MP~~~m~dg~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~~~~  366 (388)
                      ||||+|+||+++++|++|+++|||+||||+.||++||++||++|+|++++|||+||+|||||||+||+|++||+||++ .
T Consensus       240 MPa~~m~dg~~~~~f~~~s~~a~r~GvYt~~dy~dil~~l~~~W~i~~~~gl~~eg~~ard~l~~l~~r~~r~~er~~-~  318 (338)
T 2uw1_A          240 MPAHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVCELGPKIRRLEERAQ-G  318 (338)
T ss_dssp             CTTTTCCCSSCTTHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHTTGGGCCSCCHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             CCcccCcCCCChhhHHHHHHHHHHhCCCChHHHHHHHHHHHHHcCcccccCCCHHHHHHHHHHHcchHHHHHHHHHhh-h
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999 5


Q ss_pred             hhhhhcCCCccccceeCCcccC
Q 016490          367 DMAEKAGSAVPFSWVFGQEIRI  388 (388)
Q Consensus       367 ~~~~~~~~~~~f~wi~~~~~~~  388 (388)
                       |+ |+.+.++|||||+|+|.|
T Consensus       319 -~~-~~~~~~~f~wi~~~~~~~  338 (338)
T 2uw1_A          319 -RA-KEAPTMPFSWIFDRQVKL  338 (338)
T ss_dssp             -HC-CCCCEEEEGGGTTEEEEC
T ss_pred             -hh-hcCCCCCeeEeecCcccC
Confidence             77 445679999999999975

>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2

Probab=100.00  E-value=1.5e-95  Score=704.44  Aligned_cols=268  Identities=22%  Similarity=0.295  Sum_probs=231.9

Q ss_pred             CCchhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHH-HHHHHHHhhcCCCHHHHHHHHHHhhhccChh
Q 016490           53 MAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFE-QVKELRERCKQLPAEYFVVLVGEMITEEALP  131 (388)
Q Consensus        53 ~~~~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~-~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LP  131 (388)
                      .+|+++|||++|||||++|+++||| ++++||||||||| ++|++|++ +|++|||++++|||++++||+++||||||||
T Consensus         3 ~~~~~~e~~~~le~~~~~~~~~~l~-~~~~W~p~d~lPw-~~~~~F~~~~~~~~~~~~~~L~d~~~~~l~~~~itEd~LP   80 (275)
T 1za0_A            3 QKPVADALTLELEPVVEANMTRHLD-TEDIWFAHDYVPF-DQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLA   80 (275)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHH-TCCCCCGGGGCCG-GGCCCCGGGTSCCCCGGGCCSCHHHHHHHHHHHHHHHC--
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhh-hhccCChhhcCCC-cccccchhcccccccHhhccCCHHHHHHHHHHHHHhhcch
Confidence            3588999999999999999999999 9999999999999 69999998 9999999999999999999999999999999


Q ss_pred             hHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhH
Q 016490          132 TYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGF  211 (388)
Q Consensus       132 tY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l  211 (388)
                      +||++||++||.       +++|++|+++||+||||||++||+||++||+|||+++|+++++++++||+|+ +++|+++|
T Consensus        81 ~Y~~~L~~~~~~-------d~~w~~w~~~WtaEE~rHg~aL~~YL~~sg~vdp~~lE~~~~~~i~~g~~~~-~~~p~~~~  152 (275)
T 1za0_A           81 GHHRELVEHFIL-------EDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAE-KYTQVETL  152 (275)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC-----------CCCHHHHH
T ss_pred             HHHHHHHHhcCC-------CchHHHHhhhHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCC-CCCHHHHH
Confidence            999999999996       6899999999999999999999999999999999999999999999999999 77999999


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCc
Q 016490          212 VYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHL  291 (388)
Q Consensus       212 ~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~  291 (388)
                      +|+||||+||++||+|||+   .+|||||++||++||+||+||++||+++|+++|++||+++|.||++|| ++|+||||+
T Consensus       153 vy~~fqE~aT~v~y~n~a~---~~~dPvL~~i~~~IA~DE~RH~~~y~~~v~~~le~dpd~~~~A~a~~~-~~~~MP~~~  228 (275)
T 1za0_A          153 VYMAFYERCGAVFCRNLAA---QIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARA-ADLDVLGAD  228 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH-HHCCCTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHH---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH-hcCcCCcCc
Confidence            9999999999999999886   699999999999999999999999999999999999999999999999 599999999


Q ss_pred             CCCCCCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCH
Q 016490          292 MYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTS  340 (388)
Q Consensus       292 m~dg~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~  340 (388)
                      |+||      ++|++++||+||||+.+|++||+++|++|+|++++||+.
T Consensus       229 m~~~------~~~~~~~~~~GvY~~~dy~~vl~~l~~~W~v~~~~~L~~  271 (275)
T 1za0_A          229 IEAY------RDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQ  271 (275)
T ss_dssp             STTC------HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTCTTCGGGGG
T ss_pred             Cchh------hHHHHHHHHHcCCCHHHHHHHHHHHHHHcCccccccHHH
Confidence            9885      679999999999999999999999999999999999974

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=97.33  E-value=0.0018  Score=55.14  Aligned_cols=107  Identities=16%  Similarity=0.196  Sum_probs=82.6

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .......|...-..||..|++.|.+|+.- -|.+....+.           .+....++...+-...-.|.....+|+++
T Consensus        36 ~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~-----------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  104 (161)
T 1jgc_A           36 GLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLD-----------PLRIGEGPRETLECDLAGEHDALKLYREA  104 (161)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCC-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678889999999999999999999974 3333222211           11111355566666666788888889999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      .+.|...+||..+.++..|..+|..|...+..+++.+-.
T Consensus       105 ~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~  143 (161)
T 1jgc_A          105 RDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDR  143 (161)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999888899999999999999999999999999987544

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=97.18  E-value=0.01  Score=50.28  Aligned_cols=107  Identities=9%  Similarity=0.008  Sum_probs=82.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhc-CCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSG-RVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsg-rvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ......|...=..||..|++.+.+|+.--| ......+.           .+....++...+-...-.|......|+.+.
T Consensus        37 ~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~-----------~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~  105 (158)
T 2y3q_A           37 LKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLG-----------KLNIGEDVEEMLRSDLALELDGAKNLREAI  105 (158)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCC-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567888999999999999999999997433 32221111           111113556667777777888888999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      +.|...+|+..+.++..|..||..|...+..+++.+-..
T Consensus       106 ~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~~  144 (158)
T 2y3q_A          106 GYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKM  144 (158)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            998888999999999999999999999999998775443

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=97.18  E-value=0.011  Score=49.74  Aligned_cols=107  Identities=12%  Similarity=0.091  Sum_probs=82.3

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhc-CCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSG-RVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsg-rvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .......|+..-..||..|.+.|.+|+.--| ..+...+         .  .+....++...+-...-.|.....+|+.+
T Consensus        36 ~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~---------~--~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  104 (155)
T 2fkz_A           36 GLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQEL---------G--KLLIGEHTKEMLECDLKLEQAGLPDLKAA  104 (155)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC---------C--CCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC---------C--CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567788998999999999999999997433 3222111         1  11111255667777777888888899999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      .++|...+||..+.++..|..+|..|..++..+++.+-.
T Consensus       105 ~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~~  143 (155)
T 2fkz_A          105 IAYCESVGDYASRELLEDILESEEDHIDWLETQLDLIDK  143 (155)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999888899999999999999999999999999877543

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=97.13  E-value=0.0059  Score=52.52  Aligned_cols=114  Identities=14%  Similarity=0.140  Sum_probs=83.0

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhc-CCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSG-RVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsg-rvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .......|+..-..||..|++.|.+|+.--| .+.-.. .... .....++.+....+....+-...-.|......|+++
T Consensus        47 ~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~-~~~~-~~~~~~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  124 (170)
T 2vzb_A           47 MRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDP-KKWF-ELARCKYDSPTAFDSVSLLNQNVSSERCAILRYQEI  124 (170)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG-GGHH-HHCSSCCCCCCSCBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCH-HHHH-HhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567889999999999999999999998434 333222 1111 122234433222245556666666788888899999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      .++|+.. ||..+.++..|..||..|...+..+++.+-
T Consensus       125 ~~~a~~~-D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~  161 (170)
T 2vzb_A          125 ANFTNGK-DYTTCDIAKHILAEEEEHEQDLQDYLTDIA  161 (170)
T ss_dssp             HHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988666 999999999999999999999999987653

>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}

Probab=97.10  E-value=0.0024  Score=62.91  Aligned_cols=166  Identities=16%  Similarity=0.151  Sum_probs=101.8

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH--------HHHhhhccChhhHHHHhhhhcCCcccCCCCc
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL--------VGEMITEEALPTYQTMLNSLDGVRDETGASL  151 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L--------v~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~  151 (388)
                      +.-|.|.+ ||.+ .      .+.+|.    +|+++-..++        .++.++=.++|...    ...        ..
T Consensus        50 ~~fW~peE-Idls-~------D~~dw~----~Lt~~Er~~~~~~l~~~~~~D~~v~~~l~~l~----~~~--------~~  105 (346)
T 2rcc_A           50 ANFWTPFE-INMS-H------DAKQFP----TLTETEQEAFKKIIGLLAFLDSVQTDYSMRAA----EYL--------TD  105 (346)
T ss_dssp             HTCCCGGG-SCCH-H------HHHHGG----GSCHHHHHHHHHHHHHHHHTTTTCCCHHHHHH----TTB--------CC
T ss_pred             HcCCChhh-cchh-h------hHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----HHC--------Cc
Confidence            45899998 8884 2      234553    4666533322        23344444443322    222        25


Q ss_pred             hhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH---hHHH---------HHHHHhcCC----CCCCCCCchhhHHHHH
Q 016490          152 TSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ---IERS---------IQYLIRSGM----DHKFENNPYNGFVYAS  215 (388)
Q Consensus       152 ~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~---lE~~---------~~~li~~G~----~~~~~~~p~~~l~y~s  215 (388)
                      ++-..+...|.++|+.|+.+=..++..-+  ++..   +...         +...+..-|    +.....+.+..++...
T Consensus       106 ~e~~~~~~~q~~~E~iHs~sYs~il~tl~--~~~e~~~~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva~~  183 (346)
T 2rcc_A          106 SSLAALMSVLSFQEVVHNQSYSYVLSSLV--PKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDV  183 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Confidence            67788999999999999999888776322  4322   1110         011111111    1111225677788788


Q ss_pred             hhhhhhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          216 FQERATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       216 fQE~AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      +.|.--+ .++..+--+++.--=|-++++...|.+||.+|..|...++..++..+|.
T Consensus       184 ~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~~  240 (346)
T 2rcc_A          184 ILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPE  240 (346)
T ss_dssp             HHHHTTTHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCh
Confidence            8887543 2233232343333479999999999999999999999999999987773

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=97.09  E-value=0.0045  Score=54.23  Aligned_cols=109  Identities=19%  Similarity=0.204  Sum_probs=85.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ......|...=..||..|++.|.+|+. +-|......+.           .+....++...|-...=.|......|+.+.
T Consensus        42 ~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~-----------~~~~~~~~~e~l~~al~~E~~~~~~y~~l~  110 (179)
T 1nfv_A           42 YGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEG-----------KVVTGQAVPVIYESDADQEDATIEAYSQFL  110 (179)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSS-----------CCCCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCC-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567888999889999999999999997 43333322211           111123566677777778888888999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      ++|...+|+..+.++..|..||..|...+..+++.+-....
T Consensus       111 ~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l~~~g~  151 (179)
T 1nfv_A          111 KVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGD  151 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Confidence            99888899999999999999999999999999988766543

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1

Probab=97.09  E-value=0.0085  Score=52.71  Aligned_cols=108  Identities=19%  Similarity=0.222  Sum_probs=88.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCC-CCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFE-NNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      -+.++.|...-..||-.|+..|-+|+. +-|.++...+.           .|... .++...|-...-.|......|.++
T Consensus        36 l~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~-----------~p~~~~~~~~e~l~~al~~E~~~~~~~~~l  104 (167)
T 1krq_A           36 LDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVK-----------QPEQNFKSLLDVFEKTYEHEQFITKSINTL  104 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCC-----------CCCCCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-----------CCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 55555433322           11111 377888888888999988889999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      .++|...+||.+..++..+-.||..|.+.+.+++..+-.+-
T Consensus       105 ~~~a~~~~D~~~~~~l~~~l~Eq~e~~~~l~~~l~~l~~~g  145 (167)
T 1krq_A          105 VEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIG  145 (167)
T ss_dssp             HHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99998899999999999999999999999999998865543

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1

Probab=97.08  E-value=0.011  Score=51.79  Aligned_cols=110  Identities=17%  Similarity=0.138  Sum_probs=90.3

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCC-CCchhhHHHHHhhhhhhHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFE-NNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      .-+.++.|.+.-..||-.|+..|-+|+. +-|.++...+.           .|... .++...|-...-.|......|.+
T Consensus        35 gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~-----------~p~~~~~~~~e~l~~al~~E~~~~~~~~~  103 (165)
T 1eum_A           35 TFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVE-----------SPFAEYSSLDELFQETYKHEQLITQKINE  103 (165)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC-----------CCCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999999999998 44554433321           11111 37788888888899999989999


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      +.++|...+||.+..++..+-.||..|.+....++..+-.+-.
T Consensus       104 l~~~a~~~~D~~~~~fl~~~l~eq~e~~~~l~~~l~~l~~~g~  146 (165)
T 1eum_A          104 LAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGK  146 (165)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999998999999999999999999999999999988766544

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=97.00  E-value=0.016  Score=50.17  Aligned_cols=104  Identities=15%  Similarity=0.138  Sum_probs=81.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ....+.|...=..||-.|++.|-+|+.- -|.+....+           -.+....++...|-...=.|......|.++.
T Consensus        37 ~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~-----------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~  105 (159)
T 4am5_A           37 YKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTL-----------DPLRIGQTVKEVLESDLAAEREARALYQEGA  105 (159)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc-----------cccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678889988899999999999999984 343332211           1122223555666666667888888899999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      ++|...||+..+.++..|..||..|...|.++++.+
T Consensus       106 ~~a~~~~D~~t~~~l~~il~eEeeH~~~l~~~L~~i  141 (159)
T 4am5_A          106 AYAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLV  141 (159)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999988764

>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A

Probab=96.97  E-value=0.022  Score=56.05  Aligned_cols=169  Identities=14%  Similarity=0.138  Sum_probs=100.7

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHH--------HHhhhccCh-hhHHHHhhhhcCCcccCCCC
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLV--------GEMITEEAL-PTYQTMLNSLDGVRDETGAS  150 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv--------~~~iTEd~L-PtY~~~L~~~~gvr~~~g~~  150 (388)
                      ..-|.|.+ ||.+ .      .+.+|..  .+|+++-..++.        ++.++=+++ |...    ...        .
T Consensus        48 ~~fW~peE-Idls-~------D~~dw~~--~~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~~l~----~~v--------~  105 (346)
T 1syy_A           48 ANNWLPTE-IPMG-K------DIELWKS--DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIF----KHV--------T  105 (346)
T ss_dssp             HTCCCGGG-SCCH-H------HHHHHHS--SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH----HHC--------C
T ss_pred             HcCCcHhh-cchh-h------hHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH----HhC--------C
Confidence            45899998 8884 2      3445532  257765443332        233332222 2222    222        2


Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHH---------HHHHHhcCCCCCCC-----------CCchhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERS---------IQYLIRSGMDHKFE-----------NNPYNG  210 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~---------~~~li~~G~~~~~~-----------~~p~~~  210 (388)
                      .++-..|...|..+|+.|+.+-..++..-+ .|+..+...         +...+..-|+-...           .+.+..
T Consensus       106 ~~E~~~~l~~q~~~EaiHs~sYs~il~tl~-~~~~e~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~  184 (346)
T 1syy_A          106 NPEARQYLLRQAFEEAVHTHTFLYICESLG-LDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKN  184 (346)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHHHTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHH
Confidence            567778999999999999999888776322 355332111         11222333332110           134555


Q ss_pred             HHHH-HhhhhhhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          211 FVYA-SFQERATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       211 l~y~-sfQE~AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      ++.- ++.|.--+ .++..+--+++.--=|-++++...|.+||.+|..|...++..++..+|+
T Consensus       185 lva~~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~  247 (346)
T 1syy_A          185 LVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPE  247 (346)
T ss_dssp             HHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCh
Confidence            5554 57776543 2222233343333478899999999999999999999999999987876

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A

Probab=96.94  E-value=0.017  Score=51.34  Aligned_cols=122  Identities=20%  Similarity=0.258  Sum_probs=96.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|.+.-.-||-.|++-|-+|+. +-|+++...+...     ..+|     .++...|-..--.|+...-++.++.
T Consensus        38 l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p-----~~~~-----~~~~e~le~aL~~E~~v~~~~~~l~  107 (173)
T 1s3q_A           38 LKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP-----PSEW-----DSPLAAFEHVYEHEVNVTKRIHELV  107 (173)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-----CCCC-----SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-----CCCC-----CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 5555554443210     1122     3778888888889999999999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch-HHHHHHHHHh
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD-TILALAGMMK  282 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~-t~~Aia~vm~  282 (388)
                      ++|...+||++..++..+-.||..|.+.+..++..+-.+-.++ .+--|.+-+.
T Consensus       108 ~~a~~~~D~~t~~fle~~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~D~~l~  161 (173)
T 1s3q_A          108 EMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELS  161 (173)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             HHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHhHHhHHHh
Confidence            9998889999999999999999999999999998876654332 3445555453

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=96.92  E-value=0.011  Score=50.65  Aligned_cols=99  Identities=16%  Similarity=0.107  Sum_probs=81.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH--hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhh-HHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL--SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERAT-FISHGN  227 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v--sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT-~i~y~n  227 (388)
                      ....+.|...=..||-.|+..+-+|+.-  -|.  |.           .+ .|.  .++...|-...=.|... ...|.+
T Consensus        39 ~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~--p~-----------~~-~p~--~~~~e~L~~al~~E~~~~~~~y~~  102 (144)
T 1j30_A           39 YPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD--PA-----------TD-KPI--GTLEQMIESAIAGETYEWTQMYPG  102 (144)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC--TT-----------TS-CBC--SSHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC--CC-----------cC-CCC--ccHHHHHHHHHHhHHHHHHHHHHH
Confidence            5678889988889999999999999964  243  31           12 121  36677888877888888 688999


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      .++.|+..||++.+.++..|+.||..|...|.++++.+
T Consensus       103 ~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i  140 (144)
T 1j30_A          103 FAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL  140 (144)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999875

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=96.89  E-value=0.008  Score=50.22  Aligned_cols=102  Identities=13%  Similarity=0.079  Sum_probs=77.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-CChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGR-VDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-vDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ......|...-..||..|.+.+.+|+.--|. ... .+.           .+....+....+-...-.|..+..+|+.+.
T Consensus        41 ~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~-~~~-----------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~  108 (149)
T 2qqy_A           41 RQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTT-IPL-----------RVKQAEDVREMLEYARQSEYETIKRYEKRK  108 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568888999999999999999999974332 221 111           111112455666666667888888999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      +.|...+|+..+.++..|..||..|...+..+++.
T Consensus       109 ~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~  143 (149)
T 2qqy_A          109 EQAANLNMTELVVKLEDMIADETNHMEELDRLLND  143 (149)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99888899999999999999999999999888753

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=96.85  E-value=0.01  Score=50.80  Aligned_cols=107  Identities=19%  Similarity=0.181  Sum_probs=80.9

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHh-cCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLS-GRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vs-grvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .....+.|...=..||..|++.|.+|+.-- |......+.           .+....++...|-...-.|......|+.+
T Consensus        38 ~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~-----------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  106 (161)
T 3uoi_A           38 GFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIG-----------SLRIGQTLREQFEADLAIEYDVLNRLKPG  106 (161)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            356788899888999999999999999743 333321111           12222355555555555577778889999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      .++|...|||..+.++..|..||..|..+|...++.+-.
T Consensus       107 ~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~~  145 (161)
T 3uoi_A          107 IVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDK  145 (161)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            898988899999999999999999999999999987543

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A

Probab=96.76  E-value=0.031  Score=49.57  Aligned_cols=107  Identities=16%  Similarity=0.224  Sum_probs=89.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCC-CCC-CCchhhHHHHHhhhhhhHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDH-KFE-NNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~-~~~-~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      -+.++.|...-..||-.|++.|-+|+. +-|+++...+.           .| ..+ .++...|-..--.|+...-.+.+
T Consensus        45 l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~-----------~p~~~~~~~~~e~le~aL~~E~~v~~~l~~  113 (173)
T 1rcd_A           45 LSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVE-----------KPERDDWANGLEALQTALKLQKSVNQALLD  113 (173)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCC-----------CCSCSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC-----------CCCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 55566654432           11 111 37788888888899999999999


Q ss_pred             HHHHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhh
Q 016490          228 TARLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      +-++|...+||++..++. .+-.|+..|.+....++..+-.+
T Consensus       114 l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l~~~  155 (173)
T 1rcd_A          114 LHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKL  155 (173)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999998889999999998 99999999999999998875443

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0

Probab=96.64  E-value=0.072  Score=46.44  Aligned_cols=134  Identities=25%  Similarity=0.356  Sum_probs=95.2

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCC-CCchhhHHHHHhhhhhhHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFE-NNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      .....+.|...-..||..|++.|-+|+.- -|.+....+.           .|... .++...|-...-.|......++.
T Consensus        35 ~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~-----------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~  103 (174)
T 2jd6_0           35 GLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIP-----------KPPKEWESPLKAFEAAYEHEKFISKSIYE  103 (174)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-----------CCCcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            36788999999999999999999999984 3333311110           11111 35666777777778888888999


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHhhc-cCCCCCcCCC
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD-DTILALAGMMKKR-FRMPGHLMYD  294 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd-~t~~Aia~vm~~~-i~MP~~~m~d  294 (388)
                      +.++|...+|+....++..|..+|..|...+..+++.+-.+-.+ ..+--|.+-+.+. -..||..|..
T Consensus       104 ~~~~A~~~~D~~t~~~l~~~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~d~~l~~~~~~~~~~~~~~  172 (174)
T 2jd6_0          104 LAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLKFAKDSPQILFMLDKELSARAPKLPGLLMQG  172 (174)
T ss_dssp             HHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTTCCCSSCC-----
T ss_pred             HHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchhhhhHHHhhcCCCCCchhccC
Confidence            99999889999999999999999999999999999987766543 3456666666532 2334444433

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=96.57  E-value=0.05  Score=47.16  Aligned_cols=105  Identities=19%  Similarity=0.188  Sum_probs=82.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ....+.|...=..||..|++.|.+|+.- -|.+....+.           .+....++...+-...-.|.....+|+.+.
T Consensus        39 ~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~-----------~~~~~~~~~e~l~~al~~E~~~~~~y~~l~  107 (174)
T 3qb9_A           39 FTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIG-----------SLRIGQTLREQFEADLAIEYDVLNRLKPGI  107 (174)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678889999999999999999999974 3333322211           111123566677777778888888999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      ++|...+|+..+.++..|..+|..|...+...++.+-
T Consensus       108 ~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i~  144 (174)
T 3qb9_A          108 VMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD  144 (174)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998889999999999999999999999999887654

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=96.57  E-value=0.036  Score=49.17  Aligned_cols=139  Identities=17%  Similarity=0.116  Sum_probs=94.6

Q ss_pred             CCHHHHHHHHHHhhhc-cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-CChHHhHH
Q 016490          112 LPAEYFVVLVGEMITE-EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGR-VDMKQIER  189 (388)
Q Consensus       112 Lpdd~~v~Lv~~~iTE-d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-vDp~~lE~  189 (388)
                      +++.+...|--.+--| .+.=.|..+-..+.|.      .....+.|...=..||..|++.|.+|+.--|. .....+. 
T Consensus        24 ~~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~------~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~-   96 (182)
T 3fvb_A           24 GEPKVIERLNEALFLELGAVNQYWLHYRLLNDW------GYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVS-   96 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCC-
Confidence            4556555555444444 2223333322223321      35678889998889999999999999984333 2221111 


Q ss_pred             HHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          190 SIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       190 ~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                                .+....++...|-...-.|......|+++.++|...+|+..+.++..|..||..|..+|.+.++.+-.
T Consensus        97 ----------~~~~~~~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~l~~~l~~i~~  164 (182)
T 3fvb_A           97 ----------PLRIGQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDLLAK  164 (182)
T ss_dssp             ----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                      11122355556666666677788889999999988999999999999999999999999999977544

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...

Probab=96.55  E-value=0.055  Score=47.98  Aligned_cols=107  Identities=12%  Similarity=0.117  Sum_probs=88.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCC-CCC-CCchhhHHHHHhhhhhhHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDH-KFE-NNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~-~~~-~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      -+.++.|...-..||-.|++.|-+|+. +-|+++...+.           .| ..+ .++...|-..--.|+...-.+.+
T Consensus        44 l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~-----------~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~  112 (174)
T 2v2p_A           44 LEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQ-----------KPSQDEWGTTPDAMKAAIVLEKSLNQALLD  112 (174)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCC-----------CCSCSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-----------CCCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 55566554432           11 111 36778888888899999999999


Q ss_pred             HHHHHhhhCCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHHhh
Q 016490          228 TARLVKEHGDMKLAQICGT-IASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      +-++|...+||++..++.. +-.||.-|.+....++..+-.+
T Consensus       113 l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l~~~  154 (174)
T 2v2p_A          113 LHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRL  154 (174)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999988899999999997 9999999999999998875443

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=96.48  E-value=0.033  Score=47.66  Aligned_cols=108  Identities=14%  Similarity=0.083  Sum_probs=81.5

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-CChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGR-VDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-vDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .....+.|...=..||..|++.|.+|+.--|. .....+           -.+....++...|-...-.|......|+.+
T Consensus        36 ~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~-----------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  104 (161)
T 3gvy_A           36 GFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRL-----------NPLRIGQTLRETLDADLAAEHDARTLYIEA  104 (161)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678889988889999999999999984333 222111           112222355556666666677778889998


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .++|...+||..+.++..|..||..|..+|...++.+-+.
T Consensus       105 ~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i~~~  144 (161)
T 3gvy_A          105 RDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMGSI  144 (161)
T ss_dssp             HHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            8998889999999999999999999999999998775443

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=96.42  E-value=0.031  Score=47.42  Aligned_cols=105  Identities=16%  Similarity=0.104  Sum_probs=79.7

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcC-CChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGR-VDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgr-vDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .....+.|...=..||..|++.|.+|+.--|. ..- .+.           .+....++...|-...-.|......|+.+
T Consensus        36 ~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~-----------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~  103 (154)
T 3r2k_A           36 GFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPD-----------DIHPGTTVPEMLEADLKLERHVRAALAKG  103 (154)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            36678888888889999999999999984333 221 111           11112255555555555677777889999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhh-hhHHHHHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASD-EKRHETAYTKIVEKLF  266 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaD-E~RH~~~Y~~iv~~~l  266 (388)
                      .++|...|||..+.++..|..| |..|..+|...++.+-
T Consensus       104 ~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~i~  142 (154)
T 3r2k_A          104 IALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIA  142 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999888999999999999999 9999999999887643

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=96.36  E-value=0.034  Score=50.48  Aligned_cols=104  Identities=17%  Similarity=0.244  Sum_probs=82.2

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhh-hhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQE-RATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE-~AT~i~y~nta  229 (388)
                      ....+.|.+.=..||-.|+..+-+||. -|.+.           +.....+....+....|-...=.| ......|.+++
T Consensus        39 ~~~iA~~f~~~A~eE~~HA~~~~~~l~-gg~~~-----------i~~~~p~~~~~s~~e~l~~al~~E~~e~t~~y~~~~  106 (191)
T 1lko_A           39 FVQISDIFAETADQEREHAKRLFKFLE-GGDLE-----------IVAAFPAGIIADTHANLIASAAGEHHEYTEMYPSFA  106 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCC-SSCCC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc-----------ccCcCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            567888999889999999999999996 22221           222222222247778888888888 55556689999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      +.|..-||...+..+..|+.+|..|+..|.++++++-
T Consensus       107 ~~A~eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~l~  143 (191)
T 1lko_A          107 RIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIK  143 (191)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999998854

>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A

Probab=96.36  E-value=0.069  Score=48.36  Aligned_cols=124  Identities=17%  Similarity=0.244  Sum_probs=96.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -..++.|...=.-||-.|++.|-+|+. +-|+++...+..     ...+|     .++...|-..--.|+-..-.+.++.
T Consensus        41 l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~-----p~~~~-----~s~~e~le~aL~~Ek~v~~~l~~l~  110 (189)
T 3uno_A           41 LPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDT-----VRNQF-----DRPREALALALDQERTVTDQVGRLT  110 (189)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCC-----CCCCC-----SSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCC-----CCccc-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 555565444431     01122     3667777777778999999999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccC
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFR  286 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~  286 (388)
                      ++|...+||++..++..|-.+|..|.+.+.+++..+-.+-.+  ...+..-+.++.+
T Consensus       111 ~la~~~~D~~t~~fLe~fL~EQve~~~~l~~~l~~l~~~g~~--~~~l~~yL~~~~~  165 (189)
T 3uno_A          111 AVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGAN--LFELENFVAREVD  165 (189)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHSC
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHhc
Confidence            999889999999999999999999999999999987766433  2345555544455

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A

Probab=96.33  E-value=0.084  Score=47.34  Aligned_cols=110  Identities=18%  Similarity=0.208  Sum_probs=88.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|.+.-..||-.|++-|-+|+. +-|++....+...         +.....++...|-..--.|....-.+.++-
T Consensus        49 l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p---------~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~  119 (183)
T 2cih_A           49 LKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKP---------DCDDWESGLNAMECALHLEKNVNQSLLELH  119 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC---------SCSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCC---------CccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 5555554443210         111113677788888888999999999999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+||++..++. .+-.|+.-|.+.+..++..+-.+-
T Consensus       120 ~~a~~~~D~~t~~fLe~~fl~eq~e~~~~l~~~l~~l~~~g  160 (183)
T 2cih_A          120 KLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMG  160 (183)
T ss_dssp             HHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9998889999999999 799999999999999998765543

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A

Probab=96.32  E-value=0.039  Score=50.93  Aligned_cols=126  Identities=19%  Similarity=0.257  Sum_probs=96.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|...-..||-.|++-|-+|+. .-|++....+..     ...||+.....++...|-..--.|....-.+.++-
T Consensus        77 l~g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~-----p~~~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~  151 (212)
T 3a68_A           77 LRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVM-----PLSDFDHADKGDALHAMELALSLEKLTNEKLLNLH  151 (212)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCC-----CCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCC-----CCCCcCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 556666555442     12345433223557777777778999999999999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMM  281 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm  281 (388)
                      ++|...+||++..++. .+-.|+..|.+.+..++..+-.+-....+--|.+-+
T Consensus       152 ~~A~~~~D~~t~~fLe~~fL~EQve~~~~l~~~l~~l~~~g~~~gl~l~D~~l  204 (212)
T 3a68_A          152 SVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQML  204 (212)
T ss_dssp             HHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCeehHHhHHH
Confidence            9998889999999998 999999999999999998865555322344444443

>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}

Probab=96.12  E-value=0.077  Score=51.59  Aligned_cols=117  Identities=17%  Similarity=-0.014  Sum_probs=73.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHH------------HHHHHhcCCCCCCCCCchhhHHHHHhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERS------------IQYLIRSGMDHKFENNPYNGFVYASFQE  218 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~------------~~~li~~G~~~~~~~~p~~~l~y~sfQE  218 (388)
                      .++-..+...=.++|+.|+.+-..++-.-+ -|+...++.            +...+..-++  ...+++..++.-.+.|
T Consensus       115 ~~E~~~~~~~q~~~E~iHs~sYs~il~tl~-~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~--~~~~~~~~lva~~~lE  191 (311)
T 2o1z_A          115 ITEAKKFYAFQIAVENIHSETYSLLIDNYI-KDEKERMNLFHAIENIPAVKNKALWAAKWIN--DTNSFAERIVANACVE  191 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHTTSHHHHHHHHHHHHHSS--TTSCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHc--CccHHHHHHHHHHHHH
Confidence            344444445556899999999887775322 255442111            1112222243  1236788777667888


Q ss_pred             hhhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          219 RATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       219 ~AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      .--+ .++..+--+++.--=|-++++...|.+||.+|..|...+++.+.+ .|+
T Consensus       192 Gi~fysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~-~~~  244 (311)
T 2o1z_A          192 GILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLEN-KLP  244 (311)
T ss_dssp             HTTTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCC
T ss_pred             HHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence            7544 222222223333347999999999999999999999999998775 664

>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*

Probab=96.02  E-value=0.087  Score=50.85  Aligned_cols=122  Identities=13%  Similarity=-0.022  Sum_probs=78.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH--hHH-------H--HHHHHhcCCCCCCCCCchhhHHHHHhhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ--IER-------S--IQYLIRSGMDHKFENNPYNGFVYASFQER  219 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~--lE~-------~--~~~li~~G~~~~~~~~p~~~l~y~sfQE~  219 (388)
                      .++-..|...|..+|+.|+.+=..++-.-+. |++.  +..       .  +...+..-++.   .+++..+++-++.|.
T Consensus        93 ~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~-~~e~~~~f~~i~~~p~l~~K~~~i~~~~~~---~~~~~~~va~~~lEG  168 (296)
T 3mjo_A           93 TMHEEAVYTNIAFMESVHAKSYSNIFMTLAS-TPQINEAFRWSEENENLQRKAKIIMSYYNG---DDPLKKKVASTLLES  168 (296)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHTS---SCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHhcCHHHHHHHHHHHHHhcC---CcHHHHHHHHHHHHH
Confidence            5677889999999999999997777653221 3321  110       0  11111222332   367888888888887


Q ss_pred             hhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHH
Q 016490          220 ATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILA  276 (388)
Q Consensus       220 AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~A  276 (388)
                      --+ .+...+--+++.--=|-++++...|.+||.+|-.|-..++..+++..|......
T Consensus       169 i~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~~~e  226 (296)
T 3mjo_A          169 FLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEE  226 (296)
T ss_dssp             THHHHHTHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHH
Confidence            543 222222223322225889999999999999999998888888888777654433

>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*

Probab=96.01  E-value=0.071  Score=52.17  Aligned_cols=170  Identities=15%  Similarity=0.146  Sum_probs=95.3

Q ss_pred             ccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH--------HHHhhhccChhhHHHHhhhhcCCcccCCCC
Q 016490           79 VDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL--------VGEMITEEALPTYQTMLNSLDGVRDETGAS  150 (388)
Q Consensus        79 ~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L--------v~~~iTEd~LPtY~~~L~~~~gvr~~~g~~  150 (388)
                      .+.-|.|.+ ||.+ ..      +.+|.    +|+++-..++        .++.++=+|++.+...+ +..+        
T Consensus        37 ~~~fW~peE-Idls-~D------~~dw~----~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~~~~~~v-~~e~--------   95 (323)
T 3ee4_A           37 NAKFWHPAD-IDFT-RD------RADWE----KLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAM-RAEG--------   95 (323)
T ss_dssp             HHTCCCGGG-SCCT-TH------HHHHH----HSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH-HHTT--------
T ss_pred             HHcCCChHh-cChh-hh------HHHHH----HCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh-cccC--------
Confidence            355899998 9995 31      33553    3665533322        24444545554333222 1111        


Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChH---------HhHHH-HHHHHh---c-CCCCCCCCCchhhHHHH-H
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMK---------QIERS-IQYLIR---S-GMDHKFENNPYNGFVYA-S  215 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~---------~lE~~-~~~li~---~-G~~~~~~~~p~~~l~y~-s  215 (388)
                      .++...|...|..+|+.|+.+-..++-.-+. |++         .+.+. ...++.   . +-++. ..+.+..++.- .
T Consensus        96 ~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~-~~~~f~~~~~~p~lr~k~~~~l~~~~~~~~~~~~-~~~~~~~lvaf~~  173 (323)
T 3ee4_A           96 RLADEMYLTQFAFEEAKHTQVFRMWLDAVGI-SEDLHRYLDDLPAYRQIFYAELPECLNALSADPS-PAAQVRASVTYNH  173 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CSCCGGGGTTCHHHHHHHHTHHHHHHHHHHHCCC-HHHHHHHHHHHCC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHcCHHHHHHHHHHHHHHHHhhccCCC-HHHHHHHHHHHHH
Confidence            3577789999999999999987766652121 211         12111 101111   0 00110 01124444443 3


Q ss_pred             hhhhhh--HHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          216 FQERAT--FISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       216 fQE~AT--~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      +.|---  ..||.-..-+++.--=|-++++...|.+||.+|-.|...+++.++..+|+
T Consensus       174 ~lEGi~FysgF~~~~~~l~~rg~m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e~p~  231 (323)
T 3ee4_A          174 IVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDA  231 (323)
T ss_dssp             CCCTTHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence            666532  22222111122223369999999999999999999999999999998884

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=95.99  E-value=0.024  Score=49.14  Aligned_cols=134  Identities=11%  Similarity=-0.001  Sum_probs=87.9

Q ss_pred             CHHHHHHHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHH
Q 016490          113 PAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQ  192 (388)
Q Consensus       113 pdd~~v~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~  192 (388)
                      |+...-+|..++-.|...=.+-..++. -        .++........=..||.+|...|.++.-  + .++   .....
T Consensus        12 ~~~~~e~L~~Ai~~E~~~~~~Y~~lA~-~--------~~~~~k~lF~~LA~eE~~H~~~l~~l~~--~-~~~---~~~~~   76 (157)
T 1vjx_A           12 HMKVSDILTVAIRLEEEGERFYRELSE-H--------FNGEIKKTFLELADQERIHAEIFRKMSD--Q-ENW---DEVDS   76 (157)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHHTT-S--------CCSHHHHHHHHHHHHHHHHHHHHHHHHH--H-SCH---HHHTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH-c--------CCHHHHHHHHHHHHHHHHHHHHHHHhhc--c-Ccc---hhHHH
Confidence            455556666677777444443344544 2        2667777788888999999999999842  1 111   11100


Q ss_pred             H---HHhcCCCCC-------CCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          193 Y---LIRSGMDHK-------FENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       193 ~---li~~G~~~~-------~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      +   ....++-+.       ...+....+-...-.|..+..+|..+++   .+.||..++++..||.||..|+..+.+++
T Consensus        77 ~l~~~~~~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~~a~---~~~d~~~k~l~~~la~eE~~H~~~l~~~~  153 (157)
T 1vjx_A           77 YLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKD---GLVNSDAQKTVKKIIDQEKEHLRKLLEMK  153 (157)
T ss_dssp             BCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0   011111000       1113445666667789999999998555   57899999999999999999999999887


Q ss_pred             HH
Q 016490          263 EK  264 (388)
Q Consensus       263 ~~  264 (388)
                      +.
T Consensus       154 ~~  155 (157)
T 1vjx_A          154 RE  155 (157)
T ss_dssp             HH
T ss_pred             hh
Confidence            65

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1

Probab=95.97  E-value=0.21  Score=44.83  Aligned_cols=144  Identities=16%  Similarity=0.091  Sum_probs=102.7

Q ss_pred             CCCHHHHHHHHHHhhhc-cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhH
Q 016490          111 QLPAEYFVVLVGEMITE-EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIE  188 (388)
Q Consensus       111 ~Lpdd~~v~Lv~~~iTE-d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE  188 (388)
                      .+++.+..+|-..+=.| .+.=.|..+-.-+.++      ....++.|...=..||-.|++.|-+|+. +-|++....+.
T Consensus        10 m~~~~v~~~LN~qin~EL~as~~Yl~~a~~f~~~------~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~   83 (184)
T 3qz3_A           10 MLSQAMVEHLNEQINLEFFSSNLYLQMSAWCEDK------GFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIA   83 (184)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC
T ss_pred             ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCC
Confidence            44555555544333333 2333344332223222      4678999999999999999999999998 44555543332


Q ss_pred             HHHHHHHhcCCCCC-CCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          189 RSIQYLIRSGMDHK-FENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       189 ~~~~~li~~G~~~~-~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                                 .|. ...++...|-..--.|+...-.+.++.++|...+||.+..++..+-.++..|.+.+..++..+-.
T Consensus        84 -----------~p~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fl~EQve~~~~l~~~l~~l~~  152 (184)
T 3qz3_A           84 -----------APRHDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLEL  152 (184)
T ss_dssp             -----------CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                       121 12366677777777799999999999999988899999999999999999999999999988766


Q ss_pred             hCCc
Q 016490          268 IDPD  271 (388)
Q Consensus       268 ~dpd  271 (388)
                      +-++
T Consensus       153 ~g~~  156 (184)
T 3qz3_A          153 VGED  156 (184)
T ss_dssp             HCSS
T ss_pred             hCCC
Confidence            6543

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=95.90  E-value=0.017  Score=50.39  Aligned_cols=112  Identities=20%  Similarity=0.160  Sum_probs=73.0

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHh--cCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLS--GRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vs--grvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      ++....-...=..||.+|...|.++..--  +...+..+...........+.+....++...+-...=.|..+..+|..+
T Consensus        36 ~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~  115 (167)
T 2oh3_A           36 NLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEA  115 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777778888899999999999986321  1111111100000000000001011134556666777899999999986


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      ++   .+.||..++++..||.||..|+..+.++++.+
T Consensus       116 a~---~~~d~~~k~~~~~la~eE~~H~~~l~~~~~~~  149 (167)
T 2oh3_A          116 AA---NSADPEVKRLGADFAAEEAEHVVALDKWIEKT  149 (167)
T ss_dssp             HH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            55   57899999999999999999999999887654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=95.82  E-value=0.081  Score=48.55  Aligned_cols=103  Identities=15%  Similarity=0.024  Sum_probs=78.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCC-CCCCchhhHHHHHhhh-hhhHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHK-FENNPYNGFVYASFQE-RATFISHGN  227 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~-~~~~p~~~l~y~sfQE-~AT~i~y~n  227 (388)
                      ....+.|.+.=..+|..|+..+.+||. +-+.+.           + ..+ |. .-.+....|-...=.| .-....|..
T Consensus        59 ~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~-----------i-~~~-p~~~~gst~enL~~a~~gE~~E~t~my~~  125 (202)
T 1yuz_A           59 YEQIARLFEATAAAELIHIGLEYALVAEMEPGYE-----------K-PTV-AAPSAYSCDLNLISGANGEIYETSDMYPA  125 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC-----------C-CCC---CCCCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-----------e-ccC-CccCCCCHHHHHHHHHHhHHHHHHHHHHH
Confidence            567788888878889999999999996 322222           1 222 21 1125566776666677 555567899


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      .++.|+.-||...+.++..|+.+|..|+..|.++++.+-
T Consensus       126 ~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~l~  164 (202)
T 1yuz_A          126 FIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDID  164 (202)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999987643

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=95.77  E-value=0.051  Score=47.51  Aligned_cols=110  Identities=14%  Similarity=0.042  Sum_probs=76.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCC-----CCCchhhHHHHHhhhhhhHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKF-----ENNPYNGFVYASFQERATFIS  224 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~-----~~~p~~~l~y~sfQE~AT~i~  224 (388)
                      ++....-...=..+|.+|...|.+++. +.|...+.....    .+..++.+..     ..+....+-...-.|..+..+
T Consensus        48 ~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~~~  123 (175)
T 2fzf_A           48 IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKE----HIGPELQPVARELEKVQDIIDLIRWAMKAEEIAAEF  123 (175)
T ss_dssp             CTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSC----CBSCCCCCCCSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh----hhhhhhhhhHHhccccCCHHHHHHHHHHHHHHHHHH
Confidence            455666777778899999999999986 444332211100    0111222210     013455666777789999999


Q ss_pred             HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       225 y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      |..+++   ...||..++++..|+.||..|+..|.++++.+-.
T Consensus       124 Y~~~a~---~~~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~  163 (175)
T 2fzf_A          124 YLKLEE---MVKEEEKKRLMRYLADMERGHYYTLRAEYELLLN  163 (175)
T ss_dssp             HHHHHH---TSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHh---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            998665   4679999999999999999999999999887654

>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A

Probab=95.72  E-value=0.29  Score=47.82  Aligned_cols=175  Identities=14%  Similarity=0.042  Sum_probs=100.3

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHHH-hhhhcCCcccCCCCchhHHHHH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTM-LNSLDGVRDETGASLTSWATWI  158 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~~-L~~~~gvr~~~g~~~~~w~~W~  158 (388)
                      ..-|.|.+ ||-+       ..+.+|.    +|+++-..++.-.+--=-.+.+.+.. ++..+. ..   ...++-..|.
T Consensus        38 ~~fW~peE-I~ls-------~D~~dw~----~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~-~~---~~~pE~~~~~  101 (329)
T 3dhz_A           38 GNFWLPEK-IPVS-------NDIQSWN----KMTPQEQLATMRVFTGLTLLDTIQGTVGAISLL-PD---AETMHEEAVY  101 (329)
T ss_dssp             HTCCCGGG-SCGG-------GGHHHHH----TSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTG-GG---CSSHHHHHHH
T ss_pred             HcCCCHhh-cChh-------hhHHHHH----hCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HH---cCCHHHHHHH
Confidence            34788877 6653       2234553    47776544433222111134444432 121111 00   1246778899


Q ss_pred             hhhhhhhhhhhHHHHhHHhHhcCCChHH--hHH-------H--HHHHHhcCCCCCCCCCchhhHHHHHhhhhhhH-HHHH
Q 016490          159 RAWTAEENRHGDLLNKYLYLSGRVDMKQ--IER-------S--IQYLIRSGMDHKFENNPYNGFVYASFQERATF-ISHG  226 (388)
Q Consensus       159 ~~WtAEEnRHG~aLr~YL~vsgrvDp~~--lE~-------~--~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~-i~y~  226 (388)
                      ..|..+|+.|+.+=..++-.-+. |++.  +..       .  +...+..-++.   .+++..+++-++.|.--+ .+..
T Consensus       102 ~~q~~~E~iHs~sYs~il~tl~~-~~e~~~~f~~i~~~p~l~~K~~~i~~~~~~---~~~~~~~va~~~lEGi~FysgF~  177 (329)
T 3dhz_A          102 TNIAFMESVHAKSYSNIFMTLAS-TPQINEAFRWSEENENLQRKAKIIMSYYNG---DDPLKKKVASTLLESFLFYSGFY  177 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHTS---SCHHHHHHHHHHHHHTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHhhCHHHHHHHHHHHHHHcC---CcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997777753221 3321  110       0  11111222332   267888888888887533 2222


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHH
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTI  274 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~  274 (388)
                      .+--+++.--=|-++++...|.+||.+|-.|-..++..+++..|....
T Consensus       178 ~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~  225 (329)
T 3dhz_A          178 LPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQ  225 (329)
T ss_dssp             HHHHHHTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred             HHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhH
Confidence            222333322258899999999999999999988888888887776543

>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A

Probab=95.65  E-value=0.23  Score=48.34  Aligned_cols=119  Identities=13%  Similarity=0.010  Sum_probs=76.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH--hHH---H---HH---HHHhcCCCCCCCCCchhhHHHHHhhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ--IER---S---IQ---YLIRSGMDHKFENNPYNGFVYASFQER  219 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~--lE~---~---~~---~li~~G~~~~~~~~p~~~l~y~sfQE~  219 (388)
                      .++-..+...|..+|+.|+.+=...+-.-+. |++.  +..   .   ++   ..+..-++.   .+++..+++-++.|.
T Consensus        84 ~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~-~~e~~~~f~~i~~~p~l~~K~~~i~~~~~~---~~~~~~~va~~~lEg  159 (319)
T 3n37_A           84 TPHEEAVLSNISFMEAVHARSYSSIFSTLCQ-TKDVDAAYAWSEENAPLQRKAQIIQQHYRG---DDPLKKKIASVFLES  159 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHS---SCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHhhCHHHHHHHHHHHHHHcC---chHHHHHHHHHHHHH
Confidence            5677889999999999999987777753221 3321  110   0   11   111111221   267888888888887


Q ss_pred             hhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchH
Q 016490          220 ATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDT  273 (388)
Q Consensus       220 AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t  273 (388)
                      --+ .+...+--+++.--=|-++++...|.+||.+|-.|-..++..+++..|..-
T Consensus       160 i~Fys~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~~~~~~~  214 (319)
T 3n37_A          160 FLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQ  214 (319)
T ss_dssp             TTTHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHH
T ss_pred             HHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHh
Confidence            533 222222223322225889999999999999999998888888888777654

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A

Probab=95.61  E-value=0.4  Score=42.59  Aligned_cols=121  Identities=17%  Similarity=0.219  Sum_probs=92.0

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCC-CCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFE-NNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      ....+.|...=..||..|++.|-+|+.- -|.+....+.           .|... .++...|-...-.|......++.+
T Consensus        41 f~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~-----------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~l  109 (189)
T 3oj5_A           41 LPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVD-----------TVRNQFDRPREALALALDQERTVTDQVGRL  109 (189)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            6678899999999999999999999984 3443321111           11111 255667777777788888889999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhc
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKR  284 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~  284 (388)
                      .++|...+|+....++..|..+|..|...+..+++.+-.+-.+  +..+..-+.+.
T Consensus       110 ~~~A~~~~D~~t~~~l~~~l~eqe~~~~~l~~~l~~l~~~g~~--l~~~d~~l~~~  163 (189)
T 3oj5_A          110 TAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGAN--LFELENFVARE  163 (189)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHH
T ss_pred             HHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--HhHHHHHHHHh
Confidence            9999889999999999999999999999999999987765544  56666666543

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=95.59  E-value=0.14  Score=44.65  Aligned_cols=98  Identities=21%  Similarity=0.250  Sum_probs=74.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhH-HHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATF-ISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~-i~y~nta  229 (388)
                      .+..+.+...=..+|-.|+..+-++|---|  +|.           .|+.++   +-...|-...=-|..-. .-|...+
T Consensus        43 ~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~--~p~-----------~~~~~~---~T~enL~~A~~GE~~e~~~~Y~~~a  106 (144)
T 4di0_A           43 QNDIAALFRSTAEGETGHAHGHLEYLEAVG--DPA-----------TGLPFG---TSRQNLQSAIAGETHEYTDMYPGMA  106 (144)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--CTT-----------TSCCCS---SHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--Ccc-----------cCCCCC---cHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            456777778878889999999999884212  552           244332   33566666666677664 4688889


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      +.|+.-|++..+.+...|+.||.+|...|.++++.
T Consensus       107 ~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~  141 (144)
T 4di0_A          107 KTARDEGFEEIANWFETLAKAERSHANRYTKALDG  141 (144)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999998864

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A

Probab=95.54  E-value=0.36  Score=42.69  Aligned_cols=111  Identities=15%  Similarity=0.100  Sum_probs=89.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCC---CCCCchhhHHHHHhhhhhhHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHK---FENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~---~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      -+.++.|...=..||-.|++-|-+|+. .-|++....+.+           |.   ...++...|-..--.|+...-++.
T Consensus        35 l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~-----------p~~~~~~~~~~e~le~aL~~Ek~v~~~l~  103 (168)
T 3e6s_A           35 WEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPA-----------PVSCAEWSSPEDVWQSILELEQANTRSLL  103 (168)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCC-----------CCGGGTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCC-----------CCccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 445555444332           21   123666777777777999999999


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      ++.++|...+||++..++..+=.++..|.+-..+++..+-.+-+++
T Consensus       104 ~l~~la~~~~D~~t~~fLe~fl~eQve~~~~l~~~l~~l~~~g~~~  149 (168)
T 3e6s_A          104 NLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVTDENRTP  149 (168)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             HHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            9999998899999999999999999999999999999877665554

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*

Probab=95.49  E-value=0.25  Score=43.41  Aligned_cols=140  Identities=21%  Similarity=0.237  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHhhhccC-hhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHH
Q 016490          114 AEYFVVLVGEMITEEA-LPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSI  191 (388)
Q Consensus       114 dd~~v~Lv~~~iTEd~-LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~  191 (388)
                      +.+...|-..+-.|-. +=.|..+-.-+.+.      ....++.|...-..||..|++.|-+|+.- -|.+....+.   
T Consensus        18 ~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~------~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~---   88 (176)
T 1vlg_A           18 EKVRKALNDQLNREIYSSYLYLSMATYFDAE------GFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIE---   88 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHccC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCC---
Confidence            3333444433334422 34555443333332      36788999999999999999999999984 3343211111   


Q ss_pred             HHHHhcCCCCCCC-CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          192 QYLIRSGMDHKFE-NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       192 ~~li~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                              .|..+ .++...|-...-.|......++.+.++|...+|+....++..+-.|+..+...+..++..+-.+-.
T Consensus        89 --------~p~~~~~~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~~l~eq~ee~~~l~~~l~~l~~~g~  160 (176)
T 1vlg_A           89 --------KPPSNWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKANG  160 (176)
T ss_dssp             --------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence                    11111 366677777777888888889999999998999999999999999988888889998888765543

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=95.41  E-value=0.15  Score=45.55  Aligned_cols=90  Identities=18%  Similarity=0.059  Sum_probs=71.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhh-hHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERA-TFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~A-T~i~y~nta  229 (388)
                      ....+.+.+.=..+|-.|+..+-++|   +.                   ++   +...+|-...-.|.- ...-|...+
T Consensus        37 ~~~iA~~F~~~A~~E~~HA~~~~~~L---~~-------------------i~---~t~enL~~a~~gE~~e~~~mY~~~a   91 (170)
T 3pwf_A           37 FPNIAKLFRAIAYAEFVHAKNHFIAL---GK-------------------LG---KTPENLQMGIEGETFEVEEMYPVYN   91 (170)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHT---TC-------------------CC---CHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---cC-------------------CC---ChHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45677777777888999999988886   22                   11   335566666666664 355688889


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +.|+.-|+...+.+...|+.||.+|...|..+++.+
T Consensus        92 ~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l  127 (170)
T 3pwf_A           92 KAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKA  127 (170)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999876

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A

Probab=95.20  E-value=0.42  Score=42.49  Aligned_cols=110  Identities=17%  Similarity=0.242  Sum_probs=89.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|...=..||-.|++.|-+|+. .-|++....+.+.         ++....++...|-..--.|+...-++.++.
T Consensus        45 l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p---------~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~  115 (176)
T 3ka8_A           45 LHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKP---------ERDEWGNTLEAMQAALQLEKTVNQALLDLH  115 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC---------SCSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCC---------CccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 5555665444310         111123677777777778999999999999


Q ss_pred             HHHhhhCCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICGT-IASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+||++..++.. +=.++..|.+-...++..+-.+-
T Consensus       116 ~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~g  156 (176)
T 3ka8_A          116 KLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRLG  156 (176)
T ss_dssp             HHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99988999999999994 99999999999999998877665

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}

Probab=95.09  E-value=0.5  Score=43.26  Aligned_cols=114  Identities=18%  Similarity=0.256  Sum_probs=89.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|...=.-||-.|++-|-+|+. .-|+++...+.+     ...||+.....++...|-..--.|+...-+..++.
T Consensus        72 l~g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~-----p~~~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~  146 (204)
T 3vnx_A           72 LPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAA-----PEMEFANDDKGEALYAMELALSLEKLNFQKLQALQ  146 (204)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC-----CCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCC-----CCccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999998 555566555442     22344432222445666666667999888899999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+||.+..++. .+=.++..|.+-...++..+-.+-
T Consensus       147 ~lA~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~g  187 (204)
T 3vnx_A          147 AIADKHKDAALCDFVEGGLLSEQVDAVKEHAVYVSQLRRVG  187 (204)
T ss_dssp             HHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9998899999999999 799999999999999998865554

>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...

Probab=94.96  E-value=0.23  Score=49.37  Aligned_cols=174  Identities=19%  Similarity=0.194  Sum_probs=95.7

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHH-HhhhhcCCcccCCCCchhHHHHH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQT-MLNSLDGVRDETGASLTSWATWI  158 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~-~L~~~~gvr~~~g~~~~~w~~W~  158 (388)
                      ..-|.|.+ ||-+ .      .+.+|+    +|+++-..++.-.+--=-.+.+-+. .++..+.  .  -...++-..|+
T Consensus        45 ~~fW~peE-Idls-~------D~~dw~----~Lt~~Er~~~~~~l~~~~~~Dsiv~~~~~~~~~--~--~v~~pE~~~~l  108 (375)
T 1mxr_A           45 SFFWRPEE-VDVS-R------DRIDYQ----ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALL--P--LISIPELETWV  108 (375)
T ss_dssp             HTCCCGGG-SCCT-T------HHHHHH----TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTG--G--GBCSHHHHHHH
T ss_pred             hcCCCchh-cchh-h------hHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--H--hCCcHHHHHHH
Confidence            35899999 7774 2      234553    5777655444322211123333331 2221111  0  01357778899


Q ss_pred             hhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHH---HHH------hcCCCC-------------------------C--
Q 016490          159 RAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQ---YLI------RSGMDH-------------------------K--  202 (388)
Q Consensus       159 ~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~---~li------~~G~~~-------------------------~--  202 (388)
                      ..|.++|+.|+..=...+..-+ .|+..+...+.   .+.      ..-|+-                         .  
T Consensus       109 ~~~~~~E~iHs~sYs~il~tl~-~~~~e~f~~i~~~p~i~~Ka~~i~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (375)
T 1mxr_A          109 ETWAFSETIHSRSYTHIIRNIV-NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLR  187 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTC-SCHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHCSEEEEETTEEEEECHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhhhhhhhccchhhcccccccccccc
Confidence            9999999999998766654222 36654332211   000      000100                         0  


Q ss_pred             -CCCCchhhHHHHHhhhhhhHH-HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh--hCC
Q 016490          203 -FENNPYNGFVYASFQERATFI-SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE--IDP  270 (388)
Q Consensus       203 -~~~~p~~~l~y~sfQE~AT~i-~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le--~dp  270 (388)
                       ...+.+..++.-.+.|.--+. +...+--+++.--=|-++++...|++||.+|..|...+++.+..  .+|
T Consensus       188 ~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p  259 (375)
T 1mxr_A          188 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP  259 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCh
Confidence             001344555555566754321 11212223322236889999999999999999999999999887  555

>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A

Probab=94.81  E-value=0.23  Score=47.71  Aligned_cols=107  Identities=13%  Similarity=0.156  Sum_probs=76.9

Q ss_pred             HHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHH--------------HHHHHhcCCCCCCC---------------
Q 016490          155 ATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERS--------------IQYLIRSGMDHKFE---------------  204 (388)
Q Consensus       155 ~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~--------------~~~li~~G~~~~~~---------------  204 (388)
                      ..-+..=+.||..|-..+..=+. +.+...+. .++.              .++.+..|--+...               
T Consensus        56 ~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~-~~~a~~~p~~~~~~~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~  134 (266)
T 1o9i_A           56 KDLLLDTGTEEMAHVEMISTMIGYLLEDAPFG-PEDLKRDPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSS  134 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS-HHHHHHCTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCC
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHcCCCCcc-hhhcccchhhHhhhcCCChHHHHhcCCCCCccCCCCCCCcccccccC
Confidence            45556667899999999998888 66655554 3321              12344333222211               


Q ss_pred             CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          205 NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       205 ~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      .++..-|..-..-|....+-|.++-+   .++||..+.++..|-.||..|+..|.+.++.+
T Consensus       135 Gdl~aDL~~niaaE~~Ar~~Y~rl~~---~tdDp~vkd~L~fLi~RE~~H~~~f~~aLe~l  192 (266)
T 1o9i_A          135 GNLVADMRFNVVRESEARLQVSRLYS---MTEDEGVRDMLKFLLARETQHQLQFMKAQEEL  192 (266)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH---hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            14555666667778888888998666   47899999999999999999999999999886

>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1

Probab=94.80  E-value=0.32  Score=40.55  Aligned_cols=110  Identities=7%  Similarity=0.031  Sum_probs=78.7

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHH-HhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYL-IRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~l-i~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      +......|+..-..||..|.+.|..|+.--|..-+-......... +..  .+.. .++...+-...=.|......++.+
T Consensus        31 ~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~--~~~~-~~~~e~l~~~l~~e~~~~~~~~~~  107 (142)
T 1ji5_A           31 QFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQE--AAYG-ETAEGMVEAIMKDYEMMLVELKKG  107 (142)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCC--CCTT-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCC--CCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            567889999999999999999999999854443222222221111 211  1111 245556666666677777888888


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      -++|...+|++...++..|-.+|..|--++...+
T Consensus       108 ~~~a~~~~D~~t~~~l~~~l~e~ek~~w~l~~~l  141 (142)
T 1ji5_A          108 MEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFL  141 (142)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8888888999999999999999999988877654

>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A

Probab=94.49  E-value=2.4  Score=42.99  Aligned_cols=171  Identities=14%  Similarity=0.051  Sum_probs=93.2

Q ss_pred             CCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHH-HhhhhcCCcccCCCCchhHHHHHhh
Q 016490           82 SWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQT-MLNSLDGVRDETGASLTSWATWIRA  160 (388)
Q Consensus        82 ~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~-~L~~~~gvr~~~g~~~~~w~~W~~~  160 (388)
                      -|.|.+ ||.+ .      .+.+|..   +|+++-..++.-.+--=-.+.+-+. +|...+.  ++  ...++-..+...
T Consensus       127 fW~peE-Idls-~------D~~dw~~---~Lt~~Er~~~~~vLa~fa~~Dsiv~~nl~~~l~--~~--v~~pE~~~~~~~  191 (419)
T 1jk0_A          127 FWTAEE-IDLS-K------DIHDWNN---RMNENERFFISRVLAFFAASDGIVNENLVENFS--TE--VQIPEAKSFYGF  191 (419)
T ss_dssp             CCCGGG-CCCT-T------HHHHHHH---TCCHHHHHHHHHHHHHHHTTSSHHHHHHCCCCC--TS--CCCHHHHHHHHH
T ss_pred             CCchhh-cchh-c------cHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh--CCcHHHHHHHHH
Confidence            566665 6663 2      3456642   6777655444322211123444442 2222121  11  124555545566


Q ss_pred             hhhhhhhhhHHHHhHHhHhcCCChHHh-------------HHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHH-HHH
Q 016490          161 WTAEENRHGDLLNKYLYLSGRVDMKQI-------------ERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFI-SHG  226 (388)
Q Consensus       161 WtAEEnRHG~aLr~YL~vsgrvDp~~l-------------E~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i-~y~  226 (388)
                      -.+.|+.|+.+-..++-.-. -||...             .+...... .-++- ...+.+..++.-.+.|.--+. ++.
T Consensus       192 Q~~~EaIHsesYS~il~tl~-~d~~e~~~iF~~i~~~p~L~~Ka~~i~-~~~~~-~~~~~~~~lva~~~lEGI~fsg~Fa  268 (419)
T 1jk0_A          192 QIMIENIHSETYSLLIDTYI-KDPKESEFLFNAIHTIPEIGEKAEWAL-RWIQD-ADALFGERLVAFASIEGVFFSGSFA  268 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHTTCHHHHHHHHHHH-HHTTS-SSCCHHHHHHHHHHHHHTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHhhCHHHHHHHHHHH-HHHhc-cchhHHHHHHHHHHHHHHHHHHHHH
Confidence            66889999998777664211 244431             11111121 11221 123566666666777865433 333


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      .+--+++.--=|-++++...|.+||.+|..|...++..+.+ .|+
T Consensus       269 ~~~~l~~rg~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~-~~~  312 (419)
T 1jk0_A          269 SIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKN-KPD  312 (419)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCC
T ss_pred             HHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC
Confidence            22233333347899999999999999999999999987543 454

>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1

Probab=94.48  E-value=0.35  Score=40.71  Aligned_cols=109  Identities=10%  Similarity=0.034  Sum_probs=79.1

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCC-CCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKF-ENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~-~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      +......|+.....||..|.+.+..|+.--|..-+-.......   .+...... ..++...|-...=.|......++.+
T Consensus        35 ~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~---~s~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~  111 (146)
T 1jig_A           35 HFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLA---TSSVNEGTSKESAEEMVQTLVNDYSALIQELKEG  111 (146)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHH---HCCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHh---HCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999555543333333222   12222211 1144555655556677777788888


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      .++|...+|++...++..|-.||..|--++...
T Consensus       112 i~~a~~~~D~~T~~ll~~~l~e~ek~~w~l~~~  144 (146)
T 1jig_A          112 MEVAGEAGDATSADMLLAIHTTLEQHVWMLSAF  144 (146)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            888888899999999999999999998877654

>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1

Probab=94.44  E-value=0.43  Score=40.35  Aligned_cols=111  Identities=10%  Similarity=0.054  Sum_probs=80.2

Q ss_pred             CCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCC-CCCchhhHHHHHhhhhhhHHHHHH
Q 016490          149 ASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKF-ENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       149 ~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~-~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      .+......|+..-..||..|.+.+..|+.--|..-+-.......   .+...... ..++...|-...=.|......++.
T Consensus        37 ~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~---~s~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~  113 (149)
T 1n1q_A           37 PNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLE---EASIKEATGGESAAEMVSSVVNDFVDLVGELKV  113 (149)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH---HCCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHh---HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            35678899999999999999999999999655553333333222   12222211 114455555555667777778888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      +.++|...+|++...++..|-.+|..|--++...+
T Consensus       114 ~i~~a~~~~D~~T~~ll~~~l~e~ek~~w~l~~~l  148 (149)
T 1n1q_A          114 ARDVADEADDEATADMLDAIEAGLEKHVWMLEAFL  148 (149)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            88888888999999999999999999988876653

>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}

Probab=94.33  E-value=0.39  Score=47.34  Aligned_cols=113  Identities=18%  Similarity=0.024  Sum_probs=71.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH-------------hHHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ-------------IERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~-------------lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++-..+...=.++|+.|+.+=...+..-+ .|+..             +.+.. ..+..-++  ...+.+..++.-++.
T Consensus       116 ~~E~~~~~~~q~~~E~iHs~sYs~il~tl~-~d~~e~~~~f~~~~~~p~l~~K~-~~i~~~~~--~~~~~~~~lva~~~l  191 (349)
T 2p1i_A          116 IIEAKKFYSFQIAVENIHSETYSLLIDNYI-KDEKERLNLFHAIENIPAIKNKA-LWAAKWIN--DTNSFAERIVANACV  191 (349)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSHHHHHHTTHHHHSCHHHHHHH-HHHHHTSS--CSSCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHhcCHHHHHHH-HHHHHHHc--CchHHHHHHHHHHHH
Confidence            345444455666999999998887765322 25444             11111 22334344  223667777766778


Q ss_pred             hhhhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          218 ERATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       218 E~AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      |.--+ .++..+--+++.--=|-++++...|.+||.+|..|...++..+.+
T Consensus       192 EGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~  242 (349)
T 2p1i_A          192 EGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLEN  242 (349)
T ss_dssp             TTTTTHHHHHHHHHHHTTTCSTTHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            86544 223333233333336889999999999999999999999998776

>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}

Probab=94.24  E-value=0.57  Score=41.74  Aligned_cols=111  Identities=12%  Similarity=0.021  Sum_probs=81.4

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCC--CCCCCchhhHHHHHhhhhhhHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDH--KFENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~--~~~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      +......|+..-..||..|.+.|..|+.--|..-+-.+...   .-.+....  ....++...|-...-.|......|+.
T Consensus        58 ~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~---~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~  134 (192)
T 2vxx_A           58 EFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQL---AALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQ  134 (192)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH---HHHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH---HHHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            46778899999999999999999999985454432223332   12222332  11225555666666677777888899


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVE  263 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~  263 (388)
                      +.++|...+|++...++..|-.||..|--++...++
T Consensus       135 ~i~~a~~~~D~~T~~lL~~~l~eeEkh~w~L~~~L~  170 (192)
T 2vxx_A          135 QATQAESLGDRATAYLYDQILLKTEERAYHIGHFLA  170 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999998899999999999999999999888776654

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A

Probab=94.23  E-value=0.96  Score=40.95  Aligned_cols=110  Identities=14%  Similarity=0.092  Sum_probs=88.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|...=.-||-.|++-|-+|+. .-|++....+.+.         ......++...|-..--.|....-+..++.
T Consensus        45 l~g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~i~~p---------~~~~~~s~~e~le~aL~~Ek~v~~~l~~l~  115 (191)
T 3kxu_A           45 LEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKP---------AEDEWGKTPDAMKAAMALEKKLNQALLDLH  115 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC---------SCSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCcCCC---------CccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 5555655443311         111123667777777778999999999999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+||.+...+. .+=.++..|.+....++..+-.+-
T Consensus       116 ~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~g  156 (191)
T 3kxu_A          116 ALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLG  156 (191)
T ss_dssp             HHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9998899999999998 599999999999999998876664

>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A

Probab=94.21  E-value=0.25  Score=49.62  Aligned_cols=114  Identities=18%  Similarity=0.052  Sum_probs=67.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH-------------hHHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ-------------IERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~-------------lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++-..+...-.++|+.|+.+-..++-.-+ -|+..             |.+....+. .-++- ...+.+..++.-.+.
T Consensus       156 ~pE~~~~~~~Q~~~EaiHsesYS~il~tl~-~d~~e~~~if~~~~~~p~l~~Ka~~i~-~~~~~-~~~~~~~~lva~~~l  232 (390)
T 1h0o_A          156 VTEARCFYGFQIAMENIHSEMYSLLIDTYI-KDPKEREYLFNAIETMPCVKKKADWAL-RWIGD-KEATYGERVVAFAAV  232 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTHHHHCHHHHHHHHHHH-HHHHC-SSSCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHhc-cchhHHHHHHHHHHH
Confidence            445544455566889999998877765311 13433             111111111 11111 113567777766778


Q ss_pred             hhhhH-HHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          218 ERATF-ISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       218 E~AT~-i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      |.--+ .++..+--+++.--=|-++++...|.+||.+|..|...++..+.+
T Consensus       233 EGi~Fys~F~~~~~l~~rg~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~  283 (390)
T 1h0o_A          233 EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVH  283 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            86443 222222223333347899999999999999999999999997655

>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A

Probab=94.01  E-value=0.13  Score=50.22  Aligned_cols=113  Identities=19%  Similarity=0.170  Sum_probs=80.6

Q ss_pred             hHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHH-----------H-----HHHHHhcCCCCCCC-----------
Q 016490          153 SWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIER-----------S-----IQYLIRSGMDHKFE-----------  204 (388)
Q Consensus       153 ~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~-----------~-----~~~li~~G~~~~~~-----------  204 (388)
                      ....-+..=+.||..|-..+..=+. +.+..+++..+.           .     .++.+..|--+...           
T Consensus        58 ~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p~~~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Y  137 (302)
T 2v8t_A           58 PYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEY  137 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCTTGGGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGG
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccccccchHHHhhhcCCcHHHhhcCCCCCccCCCCCCCCcch
Confidence            4555566677899999999988887 665666665431           1     13344333222211           


Q ss_pred             ----CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          205 ----NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       205 ----~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                          .++..-|-.-..-|....+-|.++-+   .++||..+.++..|-.||..|+..|.+.++.+-..
T Consensus       138 v~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~---~tdDp~vkd~L~fLi~RE~~H~~~f~~ALe~l~~~  202 (302)
T 2v8t_A          138 VFTSGNLILDLLHNFFLEVAARTHKLRVYE---MTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGV  202 (302)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence                14556666677778888888998666   57899999999999999999999999999886433

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=93.98  E-value=0.13  Score=44.63  Aligned_cols=59  Identities=12%  Similarity=0.026  Sum_probs=49.4

Q ss_pred             CchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          206 NPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       206 ~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      +....+.+..-.|.....+|..+++.-+..++|.++++...||.||.+|...+.++...
T Consensus         5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~   63 (167)
T 2oh3_A            5 TLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRA   63 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44556777777899999999997774446889999999999999999999999888643

>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A

Probab=93.93  E-value=0.45  Score=49.29  Aligned_cols=132  Identities=20%  Similarity=0.184  Sum_probs=88.0

Q ss_pred             hhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh----HhcCC----------ChHHhHH
Q 016490          124 MITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY----LSGRV----------DMKQIER  189 (388)
Q Consensus       124 ~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~----vsgrv----------Dp~~lE~  189 (388)
                      +..|-++-.-...+.+...        ...+..-.-.-+.+|.||+...-.|+.    +++.+          +|..  .
T Consensus       100 ~~~Ey~a~~~~a~~~r~ap--------~~~~rnaaa~q~lDElRHaQ~~~~~~~el~~~~~~~~~f~~~~~~~~p~~--~  169 (491)
T 2inc_A          100 ALEEYAASTAEARMARFAK--------APGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAA--I  169 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHCS--------CHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCGGGGHHHHGGGSCCHHH--H
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcccccHHHhhcCccc--H
Confidence            3567666666666655443        445666667888999999999664433    22222          3332  2


Q ss_pred             HHHHHHhcCCCCCCCCCchhhHHHHHhh-hh-hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          190 SIQYLIRSGMDHKFENNPYNGFVYASFQ-ER-ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       190 ~~~~li~~G~~~~~~~~p~~~l~y~sfQ-E~-AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      -...++...+-.   .++...+++..|. |. -|...-..+++.|...||+.+..|...|..||.||..+=..+++.+++
T Consensus       170 ~~R~~~ed~~~t---~D~~E~~ialnlv~E~~~tnll~~~f~~~Aa~nGD~lt~~v~~siq~DEaRH~~~g~~ll~~ll~  246 (491)
T 2inc_A          170 AARSFFDDMMMT---RDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVE  246 (491)
T ss_dssp             HHHHHHHHHTTS---SCHHHHHHHCCCCCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHHhhcc---ccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            223333333222   2677777777777 54 234444346677778899999999999999999999999999999887


Q ss_pred             h
Q 016490          268 I  268 (388)
Q Consensus       268 ~  268 (388)
                      -
T Consensus       247 d  247 (491)
T 2inc_A          247 N  247 (491)
T ss_dssp             T
T ss_pred             C
Confidence            6

>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...

Probab=93.53  E-value=0.53  Score=49.06  Aligned_cols=135  Identities=17%  Similarity=0.119  Sum_probs=89.4

Q ss_pred             hhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHH---HHhHHhHhc----CCChHH--hH-----HH
Q 016490          125 ITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDL---LNKYLYLSG----RVDMKQ--IE-----RS  190 (388)
Q Consensus       125 iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~a---Lr~YL~vsg----rvDp~~--lE-----~~  190 (388)
                      ..|-++-.-..++.+...        ...+..-.-.-+.+|.||+..   |++|+-...    .+|-..  .+     +.
T Consensus        98 ~~EY~a~~~~a~~~r~ap--------~~~~rnaaa~qalDElRHaQ~~~~l~k~~~~~~~dp~Gfd~~r~~~~~~p~~q~  169 (512)
T 1mty_D           98 VGEYNAIAATGMLWDSAQ--------AAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTIGPLWKG  169 (512)
T ss_dssp             HHHHHHHHHHHHHHHHCC--------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTTTTHHHHGGGSSHHHH
T ss_pred             HHHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccCCCHHHHHhccCCchhh
Confidence            667777776666655543        456666677889999999998   555553211    232211  10     11


Q ss_pred             HHHHHhcCCCCCCCCCchhhHHHHHhh-hh-hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          191 IQYLIRSGMDHKFENNPYNGFVYASFQ-ER-ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       191 ~~~li~~G~~~~~~~~p~~~l~y~sfQ-E~-AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      ...++..++-.   .++...+++..|+ |. -|...-..+.+.|...||..+..+...|..||.||...=..+|+.+++ 
T Consensus       170 ~R~~fe~~~~t---~D~~E~~valn~v~E~~~tnll~~~~~~~Aa~nGD~~tptv~~siqsDEaRH~~~g~~ll~~Lle-  245 (512)
T 1mty_D          170 MKRVFSDGFIS---GDAVECSLNLQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIAN-  245 (512)
T ss_dssp             HHHHHTHHHHS---SCHHHHHHHHTTTHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             hHHHHHHHhhc---CChHHHhhhhhhhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence            22232332221   2667777777776 44 244445556778888999999999999999999999999999999997 


Q ss_pred             CCc
Q 016490          269 DPD  271 (388)
Q Consensus       269 dpd  271 (388)
                      ||+
T Consensus       246 d~~  248 (512)
T 1mty_D          246 DPA  248 (512)
T ss_dssp             SHH
T ss_pred             Ccc
Confidence            453

>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=93.53  E-value=2.8  Score=41.28  Aligned_cols=122  Identities=12%  Similarity=0.132  Sum_probs=76.0

Q ss_pred             chhHHHHHhhhhhhhh-hhhHHHHhHHhHhcCCChHH---h----------HHHHH---HHHhcCCCCCCCCCchhhHHH
Q 016490          151 LTSWATWIRAWTAEEN-RHGDLLNKYLYLSGRVDMKQ---I----------ERSIQ---YLIRSGMDHKFENNPYNGFVY  213 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEn-RHG~aLr~YL~vsgrvDp~~---l----------E~~~~---~li~~G~~~~~~~~p~~~l~y  213 (388)
                      .++...|...|.+.|+ .|+.+=...+-.-+  ++..   +          .+...   ..+.. .+-+...+.+..+++
T Consensus       104 ~pE~~~~~~~q~~~E~aiHs~sYs~il~tl~--~~~e~~~~f~~~~~~p~l~~Ka~~i~~~y~~-~~~~~~~~~~~~lva  180 (350)
T 4dr0_A          104 GHQRKAVLNFMAMMENAVHAKSYSNIFMTLA--PTETINEVFEWVKQNKYLQKKAQMIVGLYKA-IQKDDEISLFKAMVA  180 (350)
T ss_dssp             SHHHHHHHHHHHHHHHHTHHHHHHHHHHHHS--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT-CCTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CchhHHHHHHHHhcCHHHHHHHHHHHHHHHh-ccCcchHHHHHHHHH
Confidence            5677889999999999 99998666665222  3321   1          11111   11222 111111136777777


Q ss_pred             HHhhhhhhHH-HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHH
Q 016490          214 ASFQERATFI-SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTIL  275 (388)
Q Consensus       214 ~sfQE~AT~i-~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~  275 (388)
                      -++.|.--+. +...+--+++.--=|-++++...|.+||..|-.|...++..++...|..-..
T Consensus       181 ~~~lEGi~FysgF~~~~~l~~~g~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~~  243 (350)
T 4dr0_A          181 SVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKA  243 (350)
T ss_dssp             HHHHHHTTTHHHHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence            7778865321 1222222333223688999999999999999999888888888877765433

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=93.43  E-value=0.28  Score=44.52  Aligned_cols=129  Identities=19%  Similarity=0.177  Sum_probs=79.6

Q ss_pred             hhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchh
Q 016490          131 PTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYN  209 (388)
Q Consensus       131 PtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~  209 (388)
                      =.|....+.-.|        ....+.+.+.=...|-.|+....++|- +.+.....-.|...--. ..|+....-.+-..
T Consensus        44 Y~~fA~~A~~EG--------~~~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~-~~~~p~~~~~~T~e  114 (179)
T 3qhb_A           44 YPTFAEIARRSG--------QPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVS-TIESQIDAVASDSR  114 (179)
T ss_dssp             HHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHH-HHHHTHHHHHHSHH
T ss_pred             HHHHHHHHHHcC--------hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc-cccccccccCcHHH
Confidence            334444555555        556777777777779999999999884 22222111111110000 12222100001122


Q ss_pred             h----HHHHHhhhhh-hHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          210 G----FVYASFQERA-TFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       210 ~----l~y~sfQE~A-T~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      +    |-...=-|.- ...-|-..++.|+.-|.+..++....|+.+|.+|...|.++++.+.++
T Consensus       115 N~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~l~~~  178 (179)
T 3qhb_A          115 GLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEV  178 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3    4444445553 233488889999999999999999999999999999999999887654

>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A

Probab=93.25  E-value=1.8  Score=41.40  Aligned_cols=111  Identities=19%  Similarity=0.058  Sum_probs=68.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHh-------------HHHH---HHHHhcCCCCCCCCCc-hhhHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQI-------------ERSI---QYLIRSGMDHKFENNP-YNGFVY  213 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~l-------------E~~~---~~li~~G~~~~~~~~p-~~~l~y  213 (388)
                      .++...|...+.++|+.|+..=...+-.-+ .||...             .+..   ...+.++      .++ +..++.
T Consensus        91 ~pE~~~~~~~q~~~E~iHs~sYs~il~tl~-~d~~e~~~~f~~~~~~p~l~~K~~~~~~~~~~~------~~~~~~~lva  163 (286)
T 3olj_A           91 ITEARCFYGFQIAMENIHSEMYSLLIDTYI-KDPKEREFLFNAIETMPCVKKKADWALRWIGDK------EATYGERVVA  163 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTHHHHCGGGHHHHHHHHHHHHCS------SSCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC------hhHHHHHHHH
Confidence            556778889999999999998666665322 255431             1111   1112221      123 455566


Q ss_pred             HHhhhhhhH-HHHHHHHHHHhhhC-CHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          214 ASFQERATF-ISHGNTARLVKEHG-DMKLAQICGTIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       214 ~sfQE~AT~-i~y~ntarla~~~g-dPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      -++.|.--+ .++..+--+++ .| =|-++++...|.+||..|-.|...++..+++..
T Consensus       164 ~~~lEgi~f~~~F~~~~~l~~-~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~~~  220 (286)
T 3olj_A          164 FAAVEGIFFSGSFASIFWLKK-RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKP  220 (286)
T ss_dssp             HHHHHHTTTHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            567775221 11222222322 33 488999999999999999999999999877643

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=93.17  E-value=0.12  Score=44.73  Aligned_cols=54  Identities=15%  Similarity=0.057  Sum_probs=46.5

Q ss_pred             CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          205 NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       205 ~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      +++...+.+..--|....-+|.+   +|+ .++|.+++|...||.+|.+|+..+.++.
T Consensus        13 ~~~~e~L~~Ai~~E~~~~~~Y~~---lA~-~~~~~~k~lF~~LA~eE~~H~~~l~~l~   66 (157)
T 1vjx_A           13 MKVSDILTVAIRLEEEGERFYRE---LSE-HFNGEIKKTFLELADQERIHAEIFRKMS   66 (157)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHH---HTT-SCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHH---HHH-cCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            35566777777789999999998   444 6799999999999999999999999984

>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A

Probab=93.02  E-value=2.2  Score=42.06  Aligned_cols=191  Identities=13%  Similarity=0.056  Sum_probs=106.2

Q ss_pred             ccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHhhhccCh--hhHHHHhhhhcCCcccCCCCchhHHH
Q 016490           79 VDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEMITEEAL--PTYQTMLNSLDGVRDETGASLTSWAT  156 (388)
Q Consensus        79 ~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~L--PtY~~~L~~~~gvr~~~g~~~~~w~~  156 (388)
                      .++.|.|.+.+|- -.-+-|.....+.|.+-+.  -+....+-....+|..|  |.....+..-++.      .++...+
T Consensus        56 ~~~~~~p~ellpl-~gtp~w~~l~~eqR~~L~~--~e~~~~~s~~I~~E~~lv~~~~r~i~~~~~p~------~~~~~~~  126 (336)
T 3chh_A           56 TLVPDYPLEIVPF-AEHPLFLAAEPHQRQRVLT--GMWIGYNERVIATEQLIAEPAFDLVMHGVFPG------SDDPLIR  126 (336)
T ss_dssp             TTSCSSCGGGCTT-TTCHHHHTSCHHHHHHHHH--HHHHHHHHHHHHHHHHTHHHHHHHHHTTCSTT------TTCHHHH
T ss_pred             CCCCCCChhhccc-cCCHhHHhCCHHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHHHHHhccCCC------CCcHHHH
Confidence            5889999999998 3555555222222221111  12222222223344333  2322223222211      1234445


Q ss_pred             HH-hhhhhhhhhhhHHHHhHHhH----hcCC---C-hHHh-HHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHH
Q 016490          157 WI-RAWTAEENRHGDLLNKYLYL----SGRV---D-MKQI-ERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHG  226 (388)
Q Consensus       157 W~-~~WtAEEnRHG~aLr~YL~v----sgrv---D-p~~l-E~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~  226 (388)
                      +. .+=-++|++|+..--+++-.    .|.-   . |..+ -+..+..+..+  +..-+.++..++.+++-|.--..+-+
T Consensus       127 ya~ltei~DE~~Hs~Mf~~~~~~~~~~~G~~~~~~~p~~~l~r~l~~~la~~--~~~~~~~l~~~a~~lvaEeiid~~~r  204 (336)
T 3chh_A          127 KSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADM--PEQWERDIAVLVWGAVAETCINALLA  204 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHSBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHccC--chhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            54 45557999999888887763    3432   1 2222 22223333333  21112456677777777775555444


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHh
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMK  282 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~  282 (388)
                      -+.+  +..=-|..++++..=..||.||..|+++++..+.+.-+...-..++.++.
T Consensus       205 ~~~~--D~~vQP~vR~v~riHv~DEaRH~~fare~~~~~~~~l~~~~R~~~~~~l~  258 (336)
T 3chh_A          205 LLAR--DATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLP  258 (336)
T ss_dssp             HHHT--CSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             HhcC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            3222  11114788888888899999999999999999999888776666666665

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=92.59  E-value=0.18  Score=44.05  Aligned_cols=58  Identities=19%  Similarity=0.084  Sum_probs=50.2

Q ss_pred             CchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          206 NPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       206 ~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      +....+.+..-.|.....+|..+++   ...+|.+++++..||.+|..|...+.+++..++
T Consensus        20 ~~~e~L~~A~~~E~~a~~~Y~~~A~---~~~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~   77 (175)
T 2fzf_A           20 SLEELLGMAIKAEIGAREFYKSLAE---KIKIEALKEKINWLAEEEKKHEALLRKLYSQMF   77 (175)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH---SCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4456777888899999999998666   457899999999999999999999999998764

>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}

Probab=92.42  E-value=1.4  Score=37.83  Aligned_cols=110  Identities=10%  Similarity=0.018  Sum_probs=79.5

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCC-CCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMD-HKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~-~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      .......|+..-..||..|++.+..|+.--|..-+-........   +... +....++...|-...=.|......++++
T Consensus        37 ~f~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~---s~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~  113 (156)
T 2d5k_A           37 NFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQ---SIVKEAAKGYSAEQMVEELSQDFTNISKQLENA  113 (156)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH---CSSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            56788999999999999999999999995555433333322221   1121 1111255556666666677777888988


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      -++|...+|++...++.-|-.++..|--+....+
T Consensus       114 i~~a~~~~D~~T~~ll~~~l~e~Ek~~w~L~a~l  147 (156)
T 2d5k_A          114 IEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYL  147 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888888999999999999999999987766544

>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C

Probab=92.24  E-value=2  Score=41.97  Aligned_cols=160  Identities=15%  Similarity=0.025  Sum_probs=103.9

Q ss_pred             hhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCC-----CCCCchhhHHHHHhhhhhhHHHHHHHHHHHh
Q 016490          159 RAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHK-----FENNPYNGFVYASFQERATFISHGNTARLVK  233 (388)
Q Consensus       159 ~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~-----~~~~p~~~l~y~sfQE~AT~i~y~ntarla~  233 (388)
                      ..=..+|..|+..|-.|+---| +|.+.+-.   ++....+.-.     ...+=...++...|...+-...+..+.+   
T Consensus        68 a~ia~DE~GHa~~l~~~a~~lG-~d~d~l~~---~~r~~~~~~~~lfe~P~~dWad~vvr~~l~D~~a~~~~~~L~~---  140 (311)
T 3pvt_A           68 LAKVQDEAGHGLYLYSAAETLG-CAREDIYQ---KMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCR---  140 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CCHHHHHH---HHHTTSSCCCGGGGSCCCSHHHHHHHHHHHHHHHHHHHHTTTT---
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CCHHHHHH---HHhcchhhhhhHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence            3456799999999999997434 47655432   2222222110     0114456888888888888888876433   


Q ss_pred             hhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc---hHHHHHHHHHhhccCCCCCcCCCCCCcchhhhHHHHHHH
Q 016490          234 EHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD---DTILALAGMMKKRFRMPGHLMYDGQDDKTFDHFSAVTQR  310 (388)
Q Consensus       234 ~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd---~t~~Aia~vm~~~i~MP~~~m~dg~~~~lf~~~s~va~r  310 (388)
                       +.++.|+.++.+|-++|..|..|=.+.|.++-+-.|.   .+-.||.....-...|=|.  +|..     ...+..+.+
T Consensus       141 -ss~~plA~~a~ki~kEE~yH~~~g~~wv~rL~~gt~esr~r~Q~Al~~~wp~~~elFg~--~~~~-----s~~~~~~~~  212 (311)
T 3pvt_A          141 -TSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGP--NDDN-----SPNSARSLT  212 (311)
T ss_dssp             -CSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTCS--CGGG-----CTTHHHHHH
T ss_pred             -CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCC--Cccc-----cchHHHHHH
Confidence             5689999999999999999999999999999976554   3334666555422222111  1111     113556667


Q ss_pred             hcCCC-----hhh-HHHHHHHHHhhcccc
Q 016490          311 LGVYT-----GQD-YADILEFLIKRWGVE  333 (388)
Q Consensus       311 ~GvYt-----~~d-y~dIl~~ll~~W~v~  333 (388)
                      .||=.     .++ +.+.+.++++.-++.
T Consensus       213 ~Gi~~~~n~eLR~~w~~~v~~~l~~~gL~  241 (311)
T 3pvt_A          213 WKIKRFTNDELRQRFVDNTVPQVEMLGMT  241 (311)
T ss_dssp             TTSCSSCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence            77764     333 777888888877764

>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A

Probab=92.15  E-value=2.3  Score=41.83  Aligned_cols=162  Identities=12%  Similarity=0.070  Sum_probs=88.5

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH--------HHHhhhccCh-hhHHHHhhhhcCCcccCCCC
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL--------VGEMITEEAL-PTYQTMLNSLDGVRDETGAS  150 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L--------v~~~iTEd~L-PtY~~~L~~~~gvr~~~g~~  150 (388)
                      ..-|.|.+ ||-+.+-.+|.           +|+++-..++        .++.++=+++ |.+...+            .
T Consensus        54 ~nfW~peE-I~ls~D~~dw~-----------~Lt~~Er~~~~~~l~~~~~~D~iv~~nl~~~l~~~v------------~  109 (345)
T 1jk0_B           54 ASFWTAEE-IELAKDTEDFQ-----------KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQL------------Q  109 (345)
T ss_dssp             HTCCCGGG-CCCTTTSTTTT-----------TSCTTHHHHHHHHHHHHC---------CHHHHHHHS------------C
T ss_pred             HcCCChhh-cChhhhHHHHH-----------HCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHC------------C
Confidence            34799988 66642334442           4555433222        2344444454 4344322            1


Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChH------------HhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMK------------QIERSIQYLIRSGMDHKFENNPYNGFVYASFQE  218 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~------------~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE  218 (388)
                      .++-..+...-.++|+.|+.+-...+-.-+. |+.            .+.+... .+..-++. ...+.+..++.-.+.|
T Consensus       110 ~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~-~~~e~~~f~~~~~~p~l~~K~~-~i~~~~~~-~~~~~~~~lva~~~lE  186 (345)
T 1jk0_B          110 NPEGKSFYGFQIMMENIYSEVYSMMVDAFFK-DPKNIPLFKEIANLPEVKHKAA-FIERWISN-DDSLYAERLVAFAAKE  186 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-SCTTSCSGGGGCSCHHHHHHHH-HHHHTTSS-SSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHhhCHHHHHHHH-HHHHHHhC-CcHHHHHHHHHHHHHH
Confidence            3444444555669999999987766652221 221            1222222 23333432 1235777777767888


Q ss_pred             hhhHH-HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          219 RATFI-SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       219 ~AT~i-~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .--+. ++..+--+++.--=|-++++...|.+||.+|..|...++..+.+.
T Consensus       187 gi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~  237 (345)
T 1jk0_B          187 GIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTK  237 (345)
T ss_dssp             HTTTHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred             HHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            75432 222222233222368899999999999999999999999987764

>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}

Probab=92.09  E-value=0.22  Score=41.16  Aligned_cols=48  Identities=21%  Similarity=0.234  Sum_probs=37.3

Q ss_pred             hhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          218 ERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       218 E~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      |.-.-..|..   ++..+.||.+++|+..|+.+|+.|+.-|.+.+.+   .||.
T Consensus        30 EleAI~~Y~q---~a~~~~d~~~k~vl~~i~~EEkeH~g~~lelLrr---~Dp~   77 (95)
T 3k6c_A           30 ELEAVDLYNQ---RVNACKDKELKAILAHNRDEEKEHAAMLLEWIRR---CDPA   77 (95)
T ss_dssp             HHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCHH
T ss_pred             HHHHHHHHHH---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHH
Confidence            4444445665   4556899999999999999999999999888754   5663

>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}

Probab=91.77  E-value=1.5  Score=37.50  Aligned_cols=111  Identities=9%  Similarity=0.016  Sum_probs=79.9

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      +......|+..-..||..|.+.+..|+.--|..-+-..........-.....  ..++...+-...=.|......++++-
T Consensus        40 ~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~~~~~--~~~~~e~l~~~l~~e~~~~~~~~~~i  117 (158)
T 2c41_A           40 LFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVTPSSG--QLTVKQMIEEAIANHELIITEMHQDA  117 (158)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999544442222222211111111121  23555666666667777788889889


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      ++|...+|++...++.-|-.++..|--+....+
T Consensus       118 ~~a~~~~D~~T~~ll~~~l~~~Ek~~w~l~~~l  150 (158)
T 2c41_A          118 EIATEAGDIGTADLYTRLVQTHQKHRWFLKEFL  150 (158)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999889999999999999999999988777655

>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A

Probab=90.55  E-value=1.8  Score=38.30  Aligned_cols=113  Identities=10%  Similarity=0.001  Sum_probs=78.2

Q ss_pred             CCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          149 ASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       149 ~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      ........|+...-.||..|.+.|..++.--|..-+-..........-.....+. .+.-..+-...=.|......++..
T Consensus        58 ~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s~i~e~~~~~-~~~~e~l~~~l~~e~~~i~~~r~~  136 (182)
T 1tjo_A           58 AEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDV-YDIRTSLANDMAIYGDIIEATREH  136 (182)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSB-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567788899999999999999999999955555333333332111111112111 244445555555567777778888


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      -++|...||++.+.++..|-.|+..|--+....+
T Consensus       137 i~~a~e~~D~~T~dll~~~l~~~Ek~~w~L~a~l  170 (182)
T 1tjo_A          137 TELAENLGDHATAHMLREGLIELEDDAHHIEHYL  170 (182)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888889999999999999999999987776554

>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}

Probab=89.20  E-value=2.1  Score=38.14  Aligned_cols=112  Identities=12%  Similarity=0.081  Sum_probs=79.3

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCC-CCC-CCCchhhHHHHHhhhhhhHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMD-HKF-ENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~-~~~-~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      +......|+..-..||..|.+.|..|+.--|..-+........ +..-+|+ +.. ..++...|-...=.|......++.
T Consensus        55 ~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~-~s~I~~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~  133 (188)
T 2clb_A           55 EGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLAD-ISACSDAYLPENWKDPKEILKVLLEAEQCAIRTWKE  133 (188)
T ss_dssp             HHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHH-HCSSCCCCCCTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-hccCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3557889999999999999999999999655543333332211 1111222 221 124445555555567777777888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVE  263 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~  263 (388)
                      +-++|... |++.+.++.-|-.++..|...+..+++
T Consensus       134 ~i~~A~e~-D~~T~dlL~~~l~e~ee~~~~l~~~L~  168 (188)
T 2clb_A          134 VCDMTYGK-DPRTYDLAQRILQEEIEHEAWFLELLY  168 (188)
T ss_dssp             HHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            88888878 999999999999999999998887664

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=88.31  E-value=1.5  Score=40.06  Aligned_cols=96  Identities=18%  Similarity=0.135  Sum_probs=67.6

Q ss_pred             hHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC----------chHHHHHHH
Q 016490          210 GFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP----------DDTILALAG  279 (388)
Q Consensus       210 ~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp----------d~t~~Aia~  279 (388)
                      .|--..--|..-..-|...++.|+.-|-+.++.+...+|.+|..|...|.+++..+ +-+|          ..+..-|..
T Consensus        32 nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l-~~~~~i~~~p~~~~gst~enL~~  110 (202)
T 1yuz_A           32 NLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEM-EPGYEKPTVAAPSAYSCDLNLIS  110 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTCCCCCC--CCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeccCCccCCCCHHHHHHH
Confidence            34333444555555588888899889999999999999999999999999999863 2221          234444444


Q ss_pred             HHhhccCCCCCcCCCCC---CcchhhhHHHHHHHhcCCChhh
Q 016490          280 MMKKRFRMPGHLMYDGQ---DDKTFDHFSAVTQRLGVYTGQD  318 (388)
Q Consensus       280 vm~~~i~MP~~~m~dg~---~~~lf~~~s~va~r~GvYt~~d  318 (388)
                      .+.            |.   ....|-.|+.+|.+.|-|...+
T Consensus       111 a~~------------gE~~E~t~my~~~a~~A~eEgd~~~a~  140 (202)
T 1yuz_A          111 GAN------------GEIYETSDMYPAFIRKAQEEGNSKAVH  140 (202)
T ss_dssp             HHH------------HHHHHHHTHHHHHHHHHHHHTCHHHHH
T ss_pred             HHH------------hHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence            443            22   1256788888998888776655

>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A

Probab=87.93  E-value=0.85  Score=37.60  Aligned_cols=50  Identities=20%  Similarity=0.203  Sum_probs=39.8

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      -|.-.--+|..   +|..+.||.+++|+..||.+|+.|..-|.+.+.++   ||..
T Consensus        29 ~EleAI~~Y~q---~A~~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~---dp~~   78 (95)
T 1zpy_A           29 EELEAVDLYNQ---RVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC---DPAF   78 (95)
T ss_dssp             HHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CHHH
T ss_pred             HHHHHHHHHHH---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CHHH
Confidence            45555556776   44468999999999999999999999999888765   6653

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=86.68  E-value=13  Score=33.15  Aligned_cols=109  Identities=14%  Similarity=0.107  Sum_probs=73.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCC----ChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRV----DMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISH  225 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrv----Dp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y  225 (388)
                      -+.++.|.+.-..||-.|++-|-+|+.- -|++    ....+.         .-.+..-.++...|-..--.|....-.+
T Consensus        53 l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~~l~~i~---------~p~~~~~~~~~e~le~aL~~Ek~v~~~i  123 (191)
T 1z6o_M           53 RPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVR---------PPTRSSWKGGVEALEHALSMESDVTKSI  123 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGCCCC---------CCSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhcCC---------CCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999999999999984 4444    111111         0011111377888888888999999999


Q ss_pred             HHHHHHHhhh---CCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHHhh
Q 016490          226 GNTARLVKEH---GDMKLAQICGT-IASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       226 ~ntarla~~~---gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .++.++|...   +||.+.+.+.. .-.......+-..+++..+...
T Consensus       124 ~~l~~~a~~~~D~~d~~~~d~Le~~fl~EQve~~~~l~~~i~~l~k~  170 (191)
T 1z6o_M          124 RNVIKACEDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKKL  170 (191)
T ss_dssp             HHHHHHHHHCTTCCCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998776   78888777753 3444444444444444444443

>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A

Probab=84.90  E-value=8.6  Score=32.94  Aligned_cols=115  Identities=8%  Similarity=-0.034  Sum_probs=76.4

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      |.........+...-.||..|.|.|..=+..=|..-+...........-..+..+...+.-..+-.-.--|......|+.
T Consensus        36 G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~  115 (156)
T 2bk6_A           36 GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQ  115 (156)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34566777888889999999999999988855665444444432222111122211002223333334446666677888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      .-++|...||++.+.|+..|-.|+..|--+....+
T Consensus       116 ~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~l  150 (156)
T 2bk6_A          116 GIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFL  150 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            88888888999999999999999999987776554

>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}

Probab=83.88  E-value=0.21  Score=49.60  Aligned_cols=51  Identities=22%  Similarity=0.197  Sum_probs=0.0

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          212 VYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       212 ~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      -...-.|.-+--+|...++   .+.||.+++++..||.||.+|+.-|.++++++
T Consensus        25 r~ai~~E~eAi~~Y~q~A~---~~~d~~~K~vl~~ia~EEk~H~~~f~~ll~~l   75 (345)
T 2e0z_A           25 RLAIIAELDAINLYEQMAR---YSEDENVRKILLDVAREEKAHVGEFMALLLNL   75 (345)
T ss_dssp             ------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344567788888997555   57899999999999999999999999999876

>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7

Probab=83.77  E-value=2.3  Score=39.52  Aligned_cols=113  Identities=18%  Similarity=0.122  Sum_probs=75.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCC-ChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRV-DMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrv-Dp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      .++...=+..=.-||..|=.-..+.+.--|.. -+..=..+...+++. +....+..-+..|+..++.|.   =||-..+
T Consensus        56 ~~~Lv~~m~~LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~-vr~~ep~~l~D~Llv~AlIEA---RSCERF~  131 (206)
T 2itb_A           56 HLDLINMMSRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRL-VRAHEPVKLVDTLVVGAFIEA---RSCERFA  131 (206)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTT-SCSSTTHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-ccCCChHHHHHHHHHHHHHHH---HhHHHHH
Confidence            44555555666778888876666665432221 111122223333332 222211234678999999994   5688888


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .+|...+|+ |++....+..=|+|||.-|..+-+.+++.
T Consensus       132 lLa~~l~d~-L~~FY~~Ll~SEArHy~~yl~LA~~y~~~  169 (206)
T 2itb_A          132 ALVPHLDEE-LGRFYHGLLKSEARHYQGYLKLAHNYGDE  169 (206)
T ss_dssp             HHGGGSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHhcCcHH-HHHHHHHHHHHHhhHHHHHHHHHHHHcCc
Confidence            898888888 99999999999999999999999988765

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=83.45  E-value=3.5  Score=34.80  Aligned_cols=97  Identities=18%  Similarity=0.210  Sum_probs=63.8

Q ss_pred             hhhHHHHHh-hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH--HHhhCC------chHHHHHH
Q 016490          208 YNGFVYASF-QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK--LFEIDP------DDTILALA  278 (388)
Q Consensus       208 ~~~l~y~sf-QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~--~le~dp------d~t~~Aia  278 (388)
                      +.......| -|......|-..++.++..|-|.++.+...+|.+|..|..-+.+++..  + . .|      +.+...|.
T Consensus         9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~l-g-~p~~~~p~~~~~e~L~   86 (144)
T 1j30_A            9 TAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGL-T-DPATDKPIGTLEQMIE   86 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-B-CTTTSCBCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-C-CCCcCCCCccHHHHHH
Confidence            333333333 466666678888889888899999999999999999999988888764  2 1 12      22333333


Q ss_pred             HHHhhccCCCCCcCCCCCC---cchhhhHHHHHHHhcCCChhh
Q 016490          279 GMMKKRFRMPGHLMYDGQD---DKTFDHFSAVTQRLGVYTGQD  318 (388)
Q Consensus       279 ~vm~~~i~MP~~~m~dg~~---~~lf~~~s~va~r~GvYt~~d  318 (388)
                      ..+.            +..   ...|..++.+|.+.|-|...+
T Consensus        87 ~al~------------~E~~~~~~~y~~~~~~A~~egd~~~~~  117 (144)
T 1j30_A           87 SAIA------------GETYEWTQMYPGFAKVAREEGFPEVAE  117 (144)
T ss_dssp             HHHH------------HHHHHHHTHHHHHHHHHHHTTCHHHHH
T ss_pred             HHHH------------hHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence            3332            111   145667777887777666655

>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A

Probab=83.45  E-value=17  Score=37.81  Aligned_cols=189  Identities=14%  Similarity=0.082  Sum_probs=108.2

Q ss_pred             HHHHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcC---C-C------hH
Q 016490          117 FVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LSGR---V-D------MK  185 (388)
Q Consensus       117 ~v~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgr---v-D------p~  185 (388)
                      ...+.+-...|-++-.=..++..+..        ..++..-.--=+..|.||+..+-.+.. +.+.   + |      +.
T Consensus        98 k~~l~al~~~EYgA~~~~a~~~r~~~--------g~~~~na~~fqa~DeLRhAQ~~~~~~~~l~~~~~Gf~d~a~~~d~~  169 (511)
T 3u52_A           98 KLFISGISPLEHAAFQGYSKVGRQFS--------GAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDRV  169 (511)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHCS--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHTTC
T ss_pred             HHHhccccHHHHHHHHHHHHHHHhcC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhhhcCcc
Confidence            33444455566655332344444332        345555555567789999987766543 3332   1 1      11


Q ss_pred             H---hHH-HHHHHHhcCCCCCCCCCchhhHHHHHhhh--hhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHH
Q 016490          186 Q---IER-SIQYLIRSGMDHKFENNPYNGFVYASFQE--RATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYT  259 (388)
Q Consensus       186 ~---lE~-~~~~li~~G~~~~~~~~p~~~l~y~sfQE--~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~  259 (388)
                      .   ..+ ..+..++        .++...++...|+-  .-|...+..+.+.|...||..+..+...+-.||.||.+-=.
T Consensus       170 W~~~~~R~~vEd~~t--------~Dw~E~~vA~nlv~E~l~tnLl~~~~~~~Aa~nGD~~t~t~~~s~qsDesRh~~w~~  241 (511)
T 3u52_A          170 WYLSVPKSFFDDARS--------AGPFEFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFSAQSDEARHMTLGL  241 (511)
T ss_dssp             GGGHHHHHHHHHHHH--------SCHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhHHHHhhccc--------cCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence            1   111 1222221        14455555444432  24555666666677778999999999999999999999999


Q ss_pred             HHHHHHHhhCCchHH--------------HHHHHHHhh--ccCCCCCcCCCCCCcchh----hh----HHHHHHHhcCCC
Q 016490          260 KIVEKLFEIDPDDTI--------------LALAGMMKK--RFRMPGHLMYDGQDDKTF----DH----FSAVTQRLGVYT  315 (388)
Q Consensus       260 ~iv~~~le~dpd~t~--------------~Aia~vm~~--~i~MP~~~m~dg~~~~lf----~~----~s~va~r~GvYt  315 (388)
                      .+|+-+++.||+..-              .|+ ..+.-  -+-.| +-.--+.  ..+    ++    |.....+.||=-
T Consensus       242 alvk~~l~~dp~Nr~llq~wl~~w~wra~~Al-~~lg~~~dY~~p-~r~~s~~--e~~~~~~e~~~~~~~~~L~~~Gl~~  317 (511)
T 3u52_A          242 EVIKFILEQHEDNVPIVQRWIDKWFWRGFRLL-SLVSMMMDYMLP-NKVMSWS--EAWEVYYEQNGGALFKDLERYGIRP  317 (511)
T ss_dssp             HHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTCS-SCCCCHH--HHHHHHTHHHHHHHHHHHGGGTCCC
T ss_pred             HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCc-cccccHH--HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            999999988886521              133 22210  12344 2111111  222    22    567788889888


Q ss_pred             hhhHHHHHHH
Q 016490          316 GQDYADILEF  325 (388)
Q Consensus       316 ~~dy~dIl~~  325 (388)
                      |....++++.
T Consensus       318 P~~~~~~~~~  327 (511)
T 3u52_A          318 PKYQDVANDA  327 (511)
T ss_dssp             CTTHHHHHHH
T ss_pred             ChhHHHHHHh
Confidence            8877776643

>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*

Probab=82.69  E-value=24  Score=34.29  Aligned_cols=115  Identities=15%  Similarity=0.066  Sum_probs=81.9

Q ss_pred             chhHHHHHhhhhhhhhhhhH---HHHhHHhHhcC-C--C--hHH--h----HHHHHHHHhcCCCCCCCCCchhhHHHHHh
Q 016490          151 LTSWATWIRAWTAEENRHGD---LLNKYLYLSGR-V--D--MKQ--I----ERSIQYLIRSGMDHKFENNPYNGFVYASF  216 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~---aLr~YL~vsgr-v--D--p~~--l----E~~~~~li~~G~~~~~~~~p~~~l~y~sf  216 (388)
                      .+.+....---+..|.||+.   .++++|..... +  +  .++  .    =.-...++...+-.   .++...+++..|
T Consensus       141 ~~~i~n~~~~qa~DelR~aQ~~~y~~~~L~~~~~~~g~~~~~k~~w~~~p~wq~~R~~~E~~~~~---~Dw~E~~va~nl  217 (322)
T 2inc_B          141 ASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDVWENDPAWQGFRELIEKALIA---WDWGEAFTAINL  217 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHHCHHHHHHHHHHHHHTTC---CSHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccchHHHHHHhcCchhHHHHHHHHHhhcc---CCHHHHHHHHHH
Confidence            34566666667789999999   77788865422 2  1  111  1    01122333343333   277888888877


Q ss_pred             h-hh-hhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          217 Q-ER-ATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       217 Q-E~-AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      + |. -|...+..+.+.|...||..+..|..-|-.||.||..-=..+|+-+++-
T Consensus       218 v~e~l~~~l~~~~~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~~~~  271 (322)
T 2inc_B          218 VTKPAVEEALLQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEK  271 (322)
T ss_dssp             THHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHhhhHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            7 54 4677788888888889999999999999999999999999999888876

>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A

Probab=82.25  E-value=12  Score=32.93  Aligned_cols=115  Identities=7%  Similarity=-0.045  Sum_probs=75.8

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      |.........+...-.||..|.|.|..=+..=|..-+-..........-..+..+...+.-..+-.-.--|......++.
T Consensus        55 G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~  134 (175)
T 2wlu_A           55 GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV  134 (175)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34566778888899999999999999988855655444333332221111122211002223333333446666677888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      .-++|...||++.+.|+..|-.|+..|--+....+
T Consensus       135 ~i~~ae~~~D~~T~dll~~il~~~Ek~~w~L~a~L  169 (175)
T 2wlu_A          135 GLDITDEEGDAGTNDLFTAAKTEAEKTIWMLQAER  169 (175)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            88888888999999999999999999987776654

>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}

Probab=81.13  E-value=13  Score=33.80  Aligned_cols=115  Identities=7%  Similarity=-0.045  Sum_probs=76.2

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      |..+......+...-.||..|.|.|..=+..=|..-+-..........-..+..+...+.-..+-.-.--|......++.
T Consensus        71 G~~F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re  150 (199)
T 2xgw_A           71 GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV  150 (199)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            33566778888999999999999999988855555443333332221111122211002223333334446666677888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      .-++|...+|++.+.|+..|-.||..|.-+....+
T Consensus       151 ~i~~aee~~D~~T~dll~~il~~~Ekh~w~L~a~L  185 (199)
T 2xgw_A          151 GLDITDEEGDAGTNDLFTAAKTEAEKTIWMLQAER  185 (199)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888999999999999999999988776654

>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}

Probab=81.05  E-value=15  Score=31.29  Aligned_cols=112  Identities=7%  Similarity=-0.004  Sum_probs=74.4

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      |.........+...-.||..|.|.|..=+..=|..-+-..........-.....+  .+.-..+-.-.--|......++.
T Consensus        40 G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~--~~~~eml~~~l~~~~~~i~~~r~  117 (153)
T 2chp_A           40 GPHFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNE--TSASEMVQALVNDYKQISSESKF  117 (153)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence            3356677778888899999999999998885565544433333222111112221  13223333333445666667888


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHH
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKI  261 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~i  261 (388)
                      .-++|...||++.+.|+..|-.|+..|--+....
T Consensus       118 ~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~  151 (153)
T 2chp_A          118 VIGLAEENQDNATADLFVGLIEEVEKQVWMLSSY  151 (153)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888888899999999999999999988776543

>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*

Probab=80.38  E-value=16  Score=31.78  Aligned_cols=113  Identities=10%  Similarity=0.031  Sum_probs=74.8

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHH-HhcCCCCCCC-CCchhhHHHHHhhhhhhHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYL-IRSGMDHKFE-NNPYNGFVYASFQERATFISH  225 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~l-i~~G~~~~~~-~~p~~~l~y~sfQE~AT~i~y  225 (388)
                      |.........+...-.||..|.|.|..=+..=|..-+-......... +.. + +... .+.-..+-.-.--|......|
T Consensus        45 G~~f~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e-~-~~~~~~~~~eml~~~l~~~~~~i~~~  122 (165)
T 2cf7_A           45 GRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKE-V-LGDYNVTIEEQLARVVEVFRYLAALF  122 (165)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCC-C-CCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC-C-CCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            33566777888899999999999999988855555444333332221 111 1 2111 122233333333456666678


Q ss_pred             HHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHH
Q 016490          226 GNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIV  262 (388)
Q Consensus       226 ~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv  262 (388)
                      +..-++|...+|++.+.|+..|-.|+..|.-+....+
T Consensus       123 r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~L  159 (165)
T 2cf7_A          123 QKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAEL  159 (165)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888888888999999999999999999987776554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
d1afra_	345	a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protei	1e-174
d1za0a1	267	a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier pro	1e-110

>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein desaturase {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 345

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: delta 9-stearoyl-acyl carrier protein desaturase
species: Castor bean (Ricinus communis) [TaxId: 3988]

 Score =  487 bits (1256), Expect = e-174
 Identities = 250/347 (72%), Positives = 292/347 (84%), Gaps = 8/347 (2%)

Query: 44  ETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVK 103
           E    VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+   S+GF EQV+
Sbjct: 5   EVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPA-SDGFDEQVR 63

Query: 104 ELRERCKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTA 163
           ELRER K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTA
Sbjct: 64  ELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTA 123

Query: 164 EENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFI 223
           EENRHGDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFI
Sbjct: 124 EENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFI 183

Query: 224 SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKK 283
           SHGNTAR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K
Sbjct: 184 SHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRK 243

Query: 284 RFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGR 343
           +  MP HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+
Sbjct: 244 KISMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQ 303

Query: 344 KAQDFVCGLPSRIRRILENKALVDMAEKAGSA--VPFSWVFGQEIRI 388
           KAQD+VC LP RIRR+ E         +A  A  +PFSW+F +++++
Sbjct: 304 KAQDYVCRLPPRIRRLEER-----AQGRAKEAPTMPFSWIFDRQVKL 345

>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Possible acyl-[acyl-carrier protein] desaturase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  320 bits (822), Expect = e-110
 Identities = 59/276 (21%), Positives = 96/276 (34%), Gaps = 19/276 (6%)

Query: 64  LETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGE 123
           LE   E N+  HL   +  W   D++P  +     F   ++       LP          
Sbjct: 7   LEPVVEANMTRHLD-TEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEIL 65

Query: 124 MITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVD 183
           +I ++ L  +   L     + D        W  W+  WTAEE+ H   L +YL ++  VD
Sbjct: 66  LILKDNLAGHHRELVEHFILEDW-------WGRWLGRWTAEEHLHAIALREYLVVTREVD 118

Query: 184 MKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQI 243
               E      +  G     +       VY +F ER   +   N A    +  +  LA +
Sbjct: 119 PVANEDVRVQHVMKGYRA-EKYTQVETLVYMAFYERCGAVFCRNLA---AQIEEPILAGL 174

Query: 244 CGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQDDKTFDH 303
              IA DE RHE  +  +V    +   D+TI A+A        + G  +        +  
Sbjct: 175 IDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAAD-LDVLGADIEA------YRD 227

Query: 304 FSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLT 339
                   G++       ++   I  WG+     L 
Sbjct: 228 KLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLK 263

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1afra_	345	delta 9-stearoyl-acyl carrier protein desaturase {	100.0
d1za0a1	267	Possible acyl-[acyl-carrier protein] desaturase {M	100.0
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	97.7
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	97.57
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	97.41
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	97.33
d1s3qa1	162	Non-hem ferritin {Archaeon Archaeoglobus fulgidus	97.19
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	97.17
d1euma_	161	Non-hem ferritin {Escherichia coli, FtnA [TaxId: 5	97.08
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	96.89
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	96.86
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	96.8
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	96.74
d1jk0b_	285	Ribonucleotide reductase R2 {Baker's yeast (Saccha	96.66
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	96.57
d3dhza1	284	Ribonucleotide reductase R2 {Corynebacterium ammon	96.5
d1krqa_	165	Non-hem ferritin {Campylobacter jejuni [TaxId: 197	96.42
d1vlga_	164	Non-hem ferritin {Thermotoga maritima [TaxId: 2336	96.28
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	96.25
d1r03a_	171	(Apo)ferritin {Human (Homo sapiens), mitocondial i	96.11
d1w68a_	281	Ribonucleotide reductase R2 {Mouse (Mus musculus)	96.08
d1rcda_	171	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	95.87
d1mxra_	339	Ribonucleotide reductase R2 {Escherichia coli [Tax	95.75
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	95.67
d1lb3a_	179	(Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]	95.61
d1r2fa_	283	Ribonucleotide reductase R2 {Salmonella typhimuriu	95.43
d1mtyd_	512	Methane monooxygenase hydrolase alpha subunit {Met	95.27
d1syya_	317	Ribonucleotide reductase R2 {Chlamydia trachomatis	94.98
d1bg7a_	173	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	94.78
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	94.76
d2inca1	491	Toluene, o-xylene monooxygenase oxygenase subunit	94.39
d1jk0a_	334	Ribonucleotide reductase R2 {Baker's yeast (Saccha	93.27
d1jkva_	266	Manganese catalase (T-catalase) {Lactobacillus pla	93.22
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	90.4
d1zpya1	91	Hypothetical protein NE0167 {Nitrosomonas europaea	90.13
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	89.59
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	89.08
d1umna_	151	Dodecameric ferritin homolog {Streptococcus suis [	86.79
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	84.9
d2cwla1	299	Manganese catalase (T-catalase) {Thermus thermophi	83.47
d2bk6a1	150	Dodecameric ferritin homolog {Listeria innocua [Ta	81.61
d1mhyb_	383	Methane monooxygenase hydrolase beta subunit {Meth	81.44

>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein desaturase {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: delta 9-stearoyl-acyl carrier protein desaturase
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=100.00  E-value=8e-126  Score=933.17  Aligned_cols=341  Identities=74%  Similarity=1.224  Sum_probs=333.2

Q ss_pred             CccccccCCCCchhHHHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHH
Q 016490           44 ETKDVVTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGE  123 (388)
Q Consensus        44 ~~~~~~~~~~~~~~~ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~  123 (388)
                      ..+.|++|||||+|+|||++||+||++||++||||++++||||||||| ++|+||++++++|++++++|||+++++||+|
T Consensus         5 ~~~~~~~~~~~p~~~ev~~~Le~~ve~~~~~~L~~v~~~WqPhD~lP~-~~~~~F~~~~~e~~~~a~~lpd~~~v~lv~n   83 (345)
T d1afra_           5 EVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPD-PASDGFDEQVRELRERAKEIPDDYFVVLVGD   83 (345)
T ss_dssp             CCSCCCCCCSCTTTHHHHHHTHHHHHHHTGGGSCCGGGSCCGGGGSCC-TTSTTHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             hhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcccCCC-CccCCcchhccccchhhccCCHHHHHHHHHh
Confidence            358899999999999999999999999999999999999999999999 6999999999999999999999999999999


Q ss_pred             hhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCC
Q 016490          124 MITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKF  203 (388)
Q Consensus       124 ~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~  203 (388)
                      |||||||||||++||++||++|++|+++++|++|+++|||||||||++||+||++||+|||+++|++++++++.||+|++
T Consensus        84 llTEd~LPtY~~~l~~~~g~~d~~g~~~~~W~~Wv~~WTAEEnRHg~aLr~YL~vsr~VDp~~lE~~~~~~~~~G~~~~~  163 (345)
T d1afra_          84 MITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRT  163 (345)
T ss_dssp             HHHHHTHHHHHHHHTTSTTTCCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCCCCSC
T ss_pred             hhccccCchHHHHHHHHhccccccCCCCcchhhhccccccccchHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhh
Q 016490          204 ENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKK  283 (388)
Q Consensus       204 ~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~  283 (388)
                      +++|+.+|+|+||||+||++||+|||++++.+|||||++||++||+||+||++||+++|+++|++|||++|.||++||++
T Consensus       164 ~~~p~~~~vY~sfQE~AT~vsh~nt~~~a~e~gDPvL~~I~~rIA~DE~rH~~fY~~~v~~~Le~dPd~~v~Ai~~~m~~  243 (345)
T d1afra_         164 ENSPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRK  243 (345)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhHhhhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCcCCCCCCcchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCHHHHHHHHHHhcchHHHHHHHHHh
Q 016490          284 RFRMPGHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDFVCGLPSRIRRILENK  363 (388)
Q Consensus       284 ~i~MP~~~m~dg~~~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~  363 (388)
                      +|+||||+|+||+++++|++|++++|++||||++||.|||++||++|+|++++|||+||+|||||||+||.|++||+||+
T Consensus       244 ~f~MP~~~m~dg~~~~~F~~~s~~~~r~GiY~~~d~~dil~~lv~~W~i~~~~gL~~eg~~Ard~l~~l~~r~~r~~er~  323 (345)
T d1afra_         244 KISMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLEERA  323 (345)
T ss_dssp             CCCCTTTTCCCSSCTTHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTGGGCCSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hhcCccccCCCCCcchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcccccCCCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhcCCCccccceeCCcccC
Q 016490          364 ALVDMAEKAGSAVPFSWVFGQEIRI  388 (388)
Q Consensus       364 ~~~~~~~~~~~~~~f~wi~~~~~~~  388 (388)
                      + . |+ |+.+.++|||||||+|.|
T Consensus       324 ~-~-ra-~~~~~~~fswi~~r~v~~  345 (345)
T d1afra_         324 Q-G-RA-KEAPTMPFSWIFDRQVKL  345 (345)
T ss_dssp             C-H-HH-HTCCEEEEGGGTTEEEEC
T ss_pred             H-H-hh-ccCcCCceeeeccccccC
Confidence            9 4 76 555689999999999976

>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Possible acyl-[acyl-carrier protein] desaturase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.6e-91  Score=668.39  Aligned_cols=262  Identities=23%  Similarity=0.308  Sum_probs=228.6

Q ss_pred             HHHHHhHHHHHHHhHhhcccccCCCCCCCCCCCCccccChH-HHHHHHHHhhcCCCHHHHHHHHHHhhhccChhhHHHHh
Q 016490           59 EIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFF-EQVKELRERCKQLPAEYFVVLVGEMITEEALPTYQTML  137 (388)
Q Consensus        59 ev~~~Le~~~~~~~~~~l~~~~~~WqP~D~lPw~~~~~~F~-~~~~~~r~~~~~Lpdd~~v~Lv~~~iTEd~LPtY~~~L  137 (388)
                      .|+.+|||||++||++||+ ++++||||||||| ++|+||+ .++++|+|++++||++++++|++|||||||||+||++|
T Consensus         2 ~l~~~le~~~e~~~~~hl~-~~~~W~p~d~lP~-~~~~~f~~~~~~~~~~~~~~l~~~~~~alv~~lltEdnLP~Y~~~l   79 (267)
T d1za0a1           2 ALTLELEPVVEANMTRHLD-TEDIWFAHDYVPF-DQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHREL   79 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-TCCCCCGGGGCCG-GGCCCCGGGTSCCCCGGGCCSCHHHHHHHHHHHHHHHC--------
T ss_pred             cHHHHhHHHHHHHHHHhhh-hhhccCccccCCC-CCCCCccccCcccCChhhccCchhHHHHHHhhhhcccCCcHHHHHH
Confidence            4789999999999999998 8999999999999 6999996 68999999999999999999999999999999999999


Q ss_pred             hhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          138 NSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       138 ~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      |++||+       +++|++|+++|||||||||++||+||++||+|||+++|+++++++..||++.. ++|+++|+|+|||
T Consensus        80 ~~~f~~-------d~~w~~wv~~WtaEEnrHg~aL~~YL~lsg~vDp~~~e~~~~~~~~~G~~~~~-~~p~~~l~y~~fq  151 (267)
T d1za0a1          80 VEHFIL-------EDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEK-YTQVETLVYMAFY  151 (267)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------C-CCHHHHHHHHHHH
T ss_pred             HHHhcc-------chHHHHHHhcccHHHhhHHHHHHHHHHHhccCChhHhHHHHHHHHHhccCCCC-CchHHHHHHHHHH
Confidence            999997       78999999999999999999999999999999999999999999999999864 5999999999999


Q ss_pred             hhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCCCCcCCCCCC
Q 016490          218 ERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMPGHLMYDGQD  297 (388)
Q Consensus       218 E~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP~~~m~dg~~  297 (388)
                      |+||++||+|||+   .+|||||++||++||+||+||++||+++|+++|++||+++|.||++||+ +|+|||+.|+|   
T Consensus       152 E~aT~i~h~nla~---~~~dPvL~~i~~rIA~DE~rH~~fy~~~v~~~le~dpd~~~~Ai~~~~~-~~~MPg~~m~d---  224 (267)
T d1za0a1         152 ERCGAVFCRNLAA---QIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAA-DLDVLGADIEA---  224 (267)
T ss_dssp             HHHHHHHHHHHHH---HCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH-HCCCTTTTSTT---
T ss_pred             HhHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH-hcCCCCCCCCc---
Confidence            9999999999887   5899999999999999999999999999999999999999999999996 89999999999   


Q ss_pred             cchhhhHHHHHHHhcCCChhhHHHHHHHHHhhcccccccCCCH
Q 016490          298 DKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTS  340 (388)
Q Consensus       298 ~~lf~~~s~va~r~GvYt~~dy~dIl~~ll~~W~v~~~~gL~~  340 (388)
                         |+++++++|++||||+.+|.+|++++|++|+|++++||++
T Consensus       225 ---f~~~a~~~ar~GiY~~~~~~~il~~ll~~W~v~~~~~L~~  264 (267)
T d1za0a1         225 ---YRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQ  264 (267)
T ss_dssp             ---CHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTCTTCGGGGG
T ss_pred             ---HHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCccchhh
Confidence               5669999999999999999999999999999999999975

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.70  E-value=2.9e-05  Score=63.60  Aligned_cols=137  Identities=13%  Similarity=0.015  Sum_probs=85.1

Q ss_pred             HHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcC
Q 016490          120 LVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSG  198 (388)
Q Consensus       120 Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G  198 (388)
                      |..+.--|.+.-.+-..++....        ++.-.....+...||-+|...+.+++. +.|...+..............
T Consensus        16 l~~ai~~E~~a~~~Y~~~a~~~~--------~~~~~~~f~~la~eE~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (158)
T d2fzfa1          16 LGMAIKAEIGAREFYKSLAEKIK--------IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPV   87 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCC--------CTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC--------ChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccchhhhhhhhhhhh
Confidence            33344456554444444544443        556778888999999999999999886 333322211110000000000


Q ss_pred             CCCCCC-CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          199 MDHKFE-NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       199 ~~~~~~-~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      ...... .+....+-...-.|..+..+|..+++   .++||.+++++..|+.||.+|...+.+..+.+++
T Consensus        88 ~~~~~~~~~~~~~l~~a~~~E~~a~~~Y~~la~---~~~d~~~~~l~~~i~~~E~~H~~~l~~~~d~l~~  154 (158)
T d2fzfa1          88 ARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEE---MVKEEEKKRLMRYLADMERGHYYTLRAEYELLLN  154 (158)
T ss_dssp             CSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH---TSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccccCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            110000 02233445555678888888997544   6889999999999999999999999988887765

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=97.57  E-value=0.00033  Score=57.85  Aligned_cols=103  Identities=17%  Similarity=0.233  Sum_probs=76.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhh-hhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQER-ATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~-AT~i~y~nta  229 (388)
                      .+..+.+.+.=..||-+|+..|.+|+.- ..++|..           ...+....+-...+......|. -....|...+
T Consensus        38 ~~~ia~~f~~~A~eE~~HA~~l~~~l~~-lg~~p~~-----------~~~~~~~~~~~~~l~~~~~~~e~e~~~~y~~~~  105 (146)
T d1lkoa1          38 FVQISDIFAETADQEREHAKRLFKFLEG-GDLEIVA-----------AFPAGIIADTHANLIASAAGEHHEYTEMYPSFA  105 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCCS-SCCCCCC-----------CCCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCcCC-----------CCCccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678888888899999999999999864 2345532           1122221222334444444433 3456688899


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +.|+..||++.+.++..|..||..|...|.++++.+
T Consensus       106 ~~a~~~~D~~~~~~f~~i~~~E~~H~~~f~~~l~~l  141 (146)
T d1lkoa1         106 RIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNI  141 (146)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999886

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=97.41  E-value=0.0011  Score=54.03  Aligned_cols=101  Identities=18%  Similarity=0.120  Sum_probs=72.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhh-hhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQ-ERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ-E~AT~i~y~nta  229 (388)
                      .+.++.|...=..||.+|+..|-+|+.--|..+..              .+....+....+....-. |......|....
T Consensus        37 ~~~iA~~f~~~A~eE~~HA~~~~~~i~~lg~~p~~--------------~~~~~~~~~~~l~~~~~~e~~e~~~~y~~~~  102 (141)
T d1j30a_          37 YPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPA--------------TDKPIGTLEQMIESAIAGETYEWTQMYPGFA  102 (141)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTT--------------TSCBCSSHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--------------CCcCcCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            56788888888999999999999999754543321              111111111222222122 344555578888


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +.|...||+..+.++..|+.||..|...|.++++++
T Consensus       103 ~~A~~e~d~~~~~~~~~i~~~E~~H~~~f~~~l~~l  138 (141)
T d1j30a_         103 KVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL  138 (141)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899899999999999999999999999999999875

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=97.33  E-value=0.0003  Score=57.25  Aligned_cols=107  Identities=10%  Similarity=0.018  Sum_probs=71.2

Q ss_pred             hhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHH--HHhcCCCCCC-----CCCchhhHHHHHhhhhhhHHH
Q 016490          152 TSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQY--LIRSGMDHKF-----ENNPYNGFVYASFQERATFIS  224 (388)
Q Consensus       152 ~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~--li~~G~~~~~-----~~~p~~~l~y~sfQE~AT~i~  224 (388)
                      ++..........||-+|...|.+.+.-   .++.........  ....+.....     ..++...+....-.|..+..+
T Consensus        34 ~~~~~~f~~la~eE~~H~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~  110 (149)
T d1vjxa_          34 GEIKKTFLELADQERIHAEIFRKMSDQ---ENWDEVDSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIIL  110 (149)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHH---SCHHHHTCBCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCcchHHHHHHhhhhhhhhhHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence            345677788889999999999998853   344322111000  0000001000     113334444445579999999


Q ss_pred             HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          225 HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       225 y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      |..++.   ..+||.+++++..|+.||.+|...+.++.++
T Consensus       111 Y~~l~~---~~~d~~~r~~~~~i~~eE~~H~~~l~~l~~~  147 (149)
T d1vjxa_         111 YYELKD---GLVNSDAQKTVKKIIDQEKEHLRKLLEMKRE  147 (149)
T ss_dssp             HHHHHH---HCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            998555   5789999999999999999999999998765

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.19  E-value=0.0054  Score=51.49  Aligned_cols=112  Identities=20%  Similarity=0.238  Sum_probs=92.6

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCC-CCCchhhHHHHHhhhhhhHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKF-ENNPYNGFVYASFQERATFISHGN  227 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~-~~~p~~~l~y~sfQE~AT~i~y~n  227 (388)
                      +-+..+.|.+...-||-.|+..|-+|+. .-|.++...+.           .|.. ..++...|-..--+|.-....+.+
T Consensus        35 ~l~g~a~~f~~~s~eE~~Ha~~l~~yl~~rgg~~~~~~i~-----------~p~~~~~~~~~~l~~~l~~E~~v~~~l~~  103 (162)
T d1s3qa1          35 GLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVE-----------EPPSEWDSPLAAFEHVYEHEVNVTKRIHE  103 (162)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-----------CCCccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999999998 55555544332           1211 236788888888899999999999


Q ss_pred             HHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          228 TARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       228 tarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      +.++|...+|+++..++..+=.|+..|...+.+++..+-.+..++
T Consensus       104 l~~~a~~~~D~~t~~fl~~~l~eQ~e~~~~l~~~l~~l~~~g~~~  148 (162)
T d1s3qa1         104 LVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDK  148 (162)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHhhcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999999999999999887775544

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=97.17  E-value=0.0011  Score=53.82  Aligned_cols=96  Identities=16%  Similarity=0.049  Sum_probs=70.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhh-hhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQE-RATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE-~AT~i~y~nt  228 (388)
                      .+..+.|...=..||-.|+..|-+|+. +.|......+.           .|.. .+....+......| ....-.|.++
T Consensus        37 ~~~ia~~f~~~A~eE~~HA~~l~~~l~~lgg~p~~~~~~-----------~~~~-~~~~~~L~~~~~~ee~e~~~~Y~~~  104 (135)
T d1yuza1          37 YEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVA-----------APSA-YSCDLNLISGANGEIYETSDMYPAF  104 (135)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC-------------CCC-CCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-----------cCcC-CchhhhHHHHHHHHHHHHHHHHHHH
Confidence            567888999999999999999999998 54444333221           1111 12234444444444 4455568889


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAY  258 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y  258 (388)
                      .+.|+..||+..++++.+|+.||..|..-|
T Consensus       105 ~~~A~~~~d~~~~~~f~~i~~~E~~H~e~F  134 (135)
T d1yuza1         105 IRKAQEEGNSKAVHVFTRAKLAESVHAERY  134 (135)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999887

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

Probab=97.08  E-value=0.0083  Score=50.35  Aligned_cols=111  Identities=16%  Similarity=0.113  Sum_probs=91.2

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHh-cCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLS-GRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vs-grvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+..+.|.+....||-.|+..|-+|+... |.+....+..          ......++...|-..--+|.-...++.++.
T Consensus        35 l~g~a~~f~~~a~EE~~HA~~l~~yl~~rgg~~~~~~i~~----------p~~~~~~~~~~~~~al~~E~~v~~~~~~l~  104 (161)
T d1euma_          35 FEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVES----------PFAEYSSLDELFQETYKHEQLITQKINELA  104 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCC----------CCCCCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC----------CCccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999843 4444333221          111124788888888899999999999999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      ++|...+||....++.-+-.++..|.+.+.+++..+-....+
T Consensus       105 ~~A~~~~D~~t~~fl~~fl~eQ~e~~~~~~~~l~~l~~~g~~  146 (161)
T d1euma_         105 HAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKS  146 (161)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999889999999999999999999999999999987666443

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=96.89  E-value=0.013  Score=48.65  Aligned_cols=108  Identities=16%  Similarity=0.088  Sum_probs=83.2

Q ss_pred             CchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          150 SLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       150 ~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      +....+.|...=..||..|++.|.+|+.--|..-.-.          ..-.+...+++...|-...=.|......|+++.
T Consensus        36 ~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~----------~~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~  105 (160)
T d1jgca_          36 GLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQ----------KLDPLRIGEGPRETLECDLAGEHDALKLYREAR  105 (160)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS----------CCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----------ccccccCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678889998889999999999999998545432110          000112224666666666667888888899999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHh
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFE  267 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le  267 (388)
                      +.|...+|++.+.++..|..||..|..++...++.+-.
T Consensus       106 ~~a~~~~D~~t~~~l~~~l~eee~h~~~l~~~l~~i~~  143 (160)
T d1jgca_         106 DYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDR  143 (160)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988999999999999999999999999998865433

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.86  E-value=0.014  Score=47.78  Aligned_cols=105  Identities=12%  Similarity=0.033  Sum_probs=81.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      ....+.|...=..||..|++.|.+|+.--|. .|..         ...-.+....++...+-...--|......|+++.+
T Consensus        37 ~~~la~~f~~~a~eE~~Ha~~l~~~i~~lGg-~p~~---------~~~~~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~~  106 (154)
T d2fkza1          37 LEKLGKHEYHESIDEMKHADKLIKRILFLEG-LPNL---------QELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIA  106 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC---------SCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-Cccc---------ccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678888888899999999999999984332 2321         01111112235666676777778888888999999


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +|...||+....++..|..||..|...|.++++.+
T Consensus       107 ~a~~~~D~~t~~~l~~il~eE~~h~~~l~~~L~~~  141 (154)
T d2fkza1         107 YCESVGDYASRELLEDILESEEDHIDWLETQLDLI  141 (154)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999875

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0096  Score=49.10  Aligned_cols=104  Identities=12%  Similarity=0.042  Sum_probs=79.4

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      ....+.|...=..||..|++.|.+|+. +-|......+.           .+....++...+-...=-|......|+++.
T Consensus        37 ~~~la~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~-----------~~~~~~~~~~~l~~~~~~e~~~~~~~~~~~  105 (158)
T d2htna1          37 LKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLG-----------KLNIGEDVEEMLRSDLALELDGAKNLREAI  105 (158)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCC-----------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-----------cccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            556778888778999999999999998 43333322211           111123555555555557777788899999


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +.|...+||..+.++..|..||..|..+|...++.+
T Consensus       106 ~~a~~~~D~~t~~~l~~il~eee~h~~~l~~~L~~~  141 (158)
T d2htna1         106 GYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLI  141 (158)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999889999999999999999999999999888765

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=96.74  E-value=0.011  Score=49.42  Aligned_cols=108  Identities=19%  Similarity=0.176  Sum_probs=81.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTAR  230 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntar  230 (388)
                      ....+.|...=..||..|.+.|.+|+.--|. .|..         ...-.+....++-..+-..-=.|......|+++.+
T Consensus        39 ~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg-~p~~---------~~~~~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~~  108 (169)
T d1nf4a_          39 YGELAANMKLIAIDEMRHAENFAERIKELGG-EPTT---------QKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLK  108 (169)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC---------CCSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CCcc---------cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677888888889999999999999985443 2221         00001112235545555555578888888999999


Q ss_pred             HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhh
Q 016490          231 LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       231 la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      .|...+||+.+.++..|..||..|...|..+++.+=.+
T Consensus       109 ~A~~~~D~~t~~~l~~il~eE~~H~~~~e~~l~~i~~~  146 (169)
T d1nf4a_         109 VCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNL  146 (169)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99889999999999999999999999999999886544

>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]

Probab=96.66  E-value=0.028  Score=51.27  Aligned_cols=173  Identities=11%  Similarity=0.010  Sum_probs=100.1

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHH----HHhhhccChhhH-HHHhhhhcCCcccCCCCchhH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLV----GEMITEEALPTY-QTMLNSLDGVRDETGASLTSW  154 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv----~~~iTEd~LPtY-~~~L~~~~gvr~~~g~~~~~w  154 (388)
                      ..-|.|.+ +|-+.+-.+|.           +||++-.-++.    +....|.....+ ...+.....        .+++
T Consensus        44 ~~fW~peE-i~l~~D~~d~~-----------~Lt~~Ek~~~~~~l~~f~~~D~~v~~~~~~~i~~~~~--------~pE~  103 (285)
T d1jk0b_          44 ASFWTAEE-IELAKDTEDFQ-----------KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQ--------NPEG  103 (285)
T ss_dssp             HTCCCGGG-CCCTTTSTTTT-----------TSCTTHHHHHHHHHHHHC---------CHHHHHHHSC--------SHHH
T ss_pred             HcCCCccc-cCchhhHHHHH-----------hCCHHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhhcc--------cHHH
Confidence            45899999 55533445553           46655444332    222233222222 123334443        6789


Q ss_pred             HHHHhhhhhhhhhhhHHHHhHHhHhcCCChH------------HhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhH
Q 016490          155 ATWIRAWTAEENRHGDLLNKYLYLSGRVDMK------------QIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATF  222 (388)
Q Consensus       155 ~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~------------~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~  222 (388)
                      ..+...|..+|+-|+.+-...+-.-+ -|++            .+.+ ....+..-++... ......+++.++.|.--+
T Consensus       104 ~~~~~~q~~~E~iHs~sYs~il~~l~-~~~e~~~~f~~~~~~~~~~~-k~~~~~~~~~~~~-~~~~~~~i~~~~~Egi~f  180 (285)
T d1jk0b_         104 KSFYGFQIMMENIYSEVYSMMVDAFF-KDPKNIPLFKEIANLPEVKH-KAAFIERWISNDD-SLYAERLVAFAAKEGIFQ  180 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHS-CSCTTSCSGGGGCSCHHHHH-HHHHHHHTTSSSS-CCHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHhhcHHHHH-Hhhhhhhhcccch-hHHHHHHHHHHHHHHHHh
Confidence            99999999999999999887776322 1222            1222 2233444344321 123346777777777544


Q ss_pred             HHHHHHHH-HHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHH
Q 016490          223 ISHGNTAR-LVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTIL  275 (388)
Q Consensus       223 i~y~ntar-la~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~  275 (388)
                      .+.=.+-- +++.--=|-++++...|++||.+|..|...+++.+....|.+.+.
T Consensus       181 ~s~Fa~~~~l~~~~~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~i~  234 (285)
T d1jk0b_         181 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIE  234 (285)
T ss_dssp             HHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHH
T ss_pred             cchhHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence            33222111 221112478999999999999999999999999988877766554

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=96.57  E-value=0.002  Score=52.02  Aligned_cols=123  Identities=20%  Similarity=0.183  Sum_probs=78.3

Q ss_pred             cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCC------
Q 016490          128 EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDH------  201 (388)
Q Consensus       128 d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~------  201 (388)
                      ++.--|...-......      +.+.-..+...=..||.+|...|..-+.- ....+.....     ...++.+      
T Consensus        16 ~a~~~Y~~~a~~~~~~------~~~~~~~~f~~la~eE~~H~~~l~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~   83 (152)
T d2oh3a1          16 EAAERYVELADMMEAH------NNLDTATVFRDMARFSTLHGDEIKQRSRA-LELPKLMSWQ-----YRWKTPPEVGDEN   83 (152)
T ss_dssp             HHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCCCCCCGGG-----TSCCCCCCSSCC-
T ss_pred             HHHHHHHHHHHHHhhc------CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcchhh-----hccccchhHHHHH
Confidence            4455565443333321      23455666777788999999999875531 1111111100     0011110      


Q ss_pred             --CCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          202 --KFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       202 --~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                        ....+....+-+.--.|..+..+|..+++   ..+||.++.++..|+.||.+|...+.+.++++
T Consensus        84 ~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~---~~~d~~~r~~~~~l~~~E~~H~~~l~~~l~~~  146 (152)
T d2oh3a1          84 DIHYLMTPYHALRYARDNEIRGMEYYKEAAA---NSADPEVKRLGADFAAEEAEHVVALDKWIEKT  146 (152)
T ss_dssp             --CGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhcccCCHHHHHHHHHHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              11114455677777778999999998544   67899999999999999999999999988775

>d3dhza1 a.25.1.2 (A:14-297) Ribonucleotide reductase R2 {Corynebacterium ammoniagenes [TaxId: 1697]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=96.50  E-value=0.025  Score=51.51  Aligned_cols=121  Identities=13%  Similarity=0.015  Sum_probs=80.1

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH------------hHHHHHHHHhcCCCCCCCCCchhhHHHHHhhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ------------IERSIQYLIRSGMDHKFENNPYNGFVYASFQE  218 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~------------lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE  218 (388)
                      .+++..+...++.+|+.|+.+-...+..-+ -|+..            +.+. ...+..-++.   .+++..+++.++.|
T Consensus        81 ~~E~~~~~~~q~~~E~iH~~sYs~i~~~~~-~~~~~~~~~~~~~~~~~i~~k-~~~~~~~~~~---~~~~~~~va~~~~E  155 (284)
T d3dhza1          81 TMHEEAVYTNIAFMESVHAKSYSNIFMTLA-STPQINEAFRWSEENENLQRK-AKIIMSYYNG---DDPLKKKVASTLLE  155 (284)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHCHHHHHH-HHHHHHHHTS---SCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHHHHHH-HHHHHHHhhh---hHHHHHHHHHHHHH
Confidence            678899999999999999999887665322 12322            1111 1222222332   36777788888888


Q ss_pred             hhhHH-HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHH
Q 016490          219 RATFI-SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILA  276 (388)
Q Consensus       219 ~AT~i-~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~A  276 (388)
                      ..-+. +..-+--+++.--=|-++++...|++||.+|..|...++..+++..|+.-..-
T Consensus       156 Gi~F~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~e~~~~~~~e  214 (284)
T d3dhza1         156 SFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEE  214 (284)
T ss_dssp             HTTTHHHHHHHHHHHTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred             HHHHhCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHH
Confidence            75542 22222122221124678999999999999999999999999999888654443

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

Probab=96.42  E-value=0.036  Score=46.59  Aligned_cols=120  Identities=17%  Similarity=0.186  Sum_probs=95.5

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCC-CCCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHK-FENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~-~~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      -+.++.|.....-||-.|+..|-+|+. .-|.+....+.           .|. ...++...|-..-=.|+-....+.++
T Consensus        36 l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~-----------~p~~~~~~~~~~l~~al~~E~~v~~~~~~l  104 (165)
T d1krqa_          36 LDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVK-----------QPEQNFKSLLDVFEKTYEHEQFITKSINTL  104 (165)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCC-----------CCCCCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccCccc-----------cccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999998 45555544332           111 12377888888888999999999999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch-HHHHHHHHH
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD-TILALAGMM  281 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~-t~~Aia~vm  281 (388)
                      .++|...+|+....++.-+=.++..|.+.+.+++..+-.+..++ .+--|.+-+
T Consensus       105 ~~~A~~~~D~~t~~fl~~fl~eQ~e~~~~~~~~l~~l~~~g~~g~~l~~~D~~l  158 (165)
T d1krqa_         105 VEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYI  158 (165)
T ss_dssp             HHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCSTTTHHHHHHHHH
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHH
Confidence            99999999999999999999999999999999999976665544 233344444

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

Probab=96.28  E-value=0.043  Score=45.91  Aligned_cols=111  Identities=22%  Similarity=0.259  Sum_probs=90.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCC-CCCchhhHHHHHhhhhhhHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKF-ENNPYNGFVYASFQERATFISHGNT  228 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~-~~~p~~~l~y~sfQE~AT~i~y~nt  228 (388)
                      -+.++.|.+...-||..|+..|-+|+.- -|.+....+.           .|.. ..++...|-...=+|.-....+.++
T Consensus        38 l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~-----------~p~~~~~~~~~~~~~al~~E~~v~~~~~~l  106 (164)
T d1vlga_          38 FKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIE-----------KPPSNWNGIKDAFEAALKHEEFVTQSIYNI  106 (164)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBC-----------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999999999973 3333433332           1221 2377888888888999999999999


Q ss_pred             HHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       229 arla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      .++|...+|+.+...+..+-.++..|.+.+..++..+-.+..++
T Consensus       107 ~~~a~~~~D~~t~~fl~~fl~eQ~e~~~~l~~~l~~l~~~g~~~  150 (164)
T d1vlga_         107 LELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKANGQM  150 (164)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            99998899999999999999999999999999999877665544

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.25  E-value=0.019  Score=46.92  Aligned_cols=90  Identities=18%  Similarity=0.054  Sum_probs=64.8

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhh-hhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQE-RATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE-~AT~i~y~nta  229 (388)
                      .+.++.-.+.=..||-+|+..+-+.+..-+. +|+.+.                        ..---| ....-.|.+..
T Consensus        37 ~~~lA~~f~~~A~eE~~HA~~~~~~i~~l~~-~~~~L~------------------------~~~~~e~~e~~~~Y~e~~   91 (133)
T d1nnqa1          37 FPNIAKLFRAIAYAEFVHAKNHFIALGKLGK-TPENLQ------------------------MGIEGETFEVEEMYPVYN   91 (133)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-HHHHHH------------------------HHHHHHHHHHHTHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHhhhH------------------------HHHHHhHHHHHHHHHHHH
Confidence            4566666777778999999999887732110 111111                        111112 33445588888


Q ss_pred             HHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          230 RLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      +.|...||+..+.+..+|+.||.+|...|.+.++.+
T Consensus        92 ~~a~~egd~~~a~~f~~i~~~E~~Ha~~f~~~l~~l  127 (133)
T d1nnqa1          92 KAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKA  127 (133)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899899999999999999999999999999999875

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

Probab=96.11  E-value=0.051  Score=45.86  Aligned_cols=145  Identities=14%  Similarity=0.180  Sum_probs=103.4

Q ss_pred             CCHHHHHHHHHHhhhc-cChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHH
Q 016490          112 LPAEYFVVLVGEMITE-EALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIER  189 (388)
Q Consensus       112 Lpdd~~v~Lv~~~iTE-d~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~  189 (388)
                      .++++-.+|-..+=.| .+.=.|.. ++.+|...+   .+-+.++.|.+....||..|+.-|-+|+.. -|.++...++.
T Consensus         7 ~~~e~e~aLN~qi~~El~as~~Yl~-ma~~f~~~~---~~l~g~a~~f~~~a~EE~~Ha~~l~~yi~~rgg~~~~~~i~~   82 (171)
T d1r03a_           7 FHPDSEAAINRQINLELYASYVYLS-MAYYFSRDD---VALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKK   82 (171)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTSTT---TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhh---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccC
Confidence            4556666665554444 33334432 345553211   135689999999999999999999999984 45555433221


Q ss_pred             HHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhh
Q 016490          190 SIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       190 ~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                               ..+....++...|-..--+|......+.++.++|...+|+.....+. .+-..+..|.+.+.+++..+-.+
T Consensus        83 ---------~~~~~~~s~~~~~~~~l~~E~~vt~~i~~l~~~a~~~~D~~t~~fle~~fl~eQ~e~~~~l~~~l~~l~~i  153 (171)
T d1r03a_          83 ---------PEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKM  153 (171)
T ss_dssp             ---------CSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                     11122246788888888899999999999999999999999999886 58888889999999999887766


Q ss_pred             C
Q 016490          269 D  269 (388)
Q Consensus       269 d  269 (388)
                      .
T Consensus       154 g  154 (171)
T d1r03a_         154 G  154 (171)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1w68a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.08  E-value=0.044  Score=49.49  Aligned_cols=122  Identities=17%  Similarity=0.051  Sum_probs=76.6

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHH-------------HHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIER-------------SIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~-------------~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .+++...+..|..+|+.|+.+-..++-.-+ -|+...+.             ........ +. ....+-...+++.++-
T Consensus        89 ~~e~~~~~~~~~~~E~iH~~sYs~il~t~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~v~~~~~  165 (281)
T d1w68a_          89 VTEARCFYGFQIAMENIHSEMYSLLIDTYI-KDPKEREYLFNAIETMPCVKKKADWALRW-IG-DKEATYGERVVAFAAV  165 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTGGGTCHHHHHHHHHHHHH-HH-CSSSCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhhHHHHHHHHHhhHHHHHHHHHHHhh-hc-cccchHHHHHHHHHHH
Confidence            678888999999999999999888875322 25544221             11111111 11 1112334566777776


Q ss_pred             hhhhHHH-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHH
Q 016490          218 ERATFIS-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTIL  275 (388)
Q Consensus       218 E~AT~i~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~  275 (388)
                      |.--+.+ +.-+--+++.--=|-+++|...|++||.+|..|...+++.+++..+...+.
T Consensus       166 Egi~f~s~F~~~~~~~~~g~m~g~~~~i~~I~rDE~~H~~~~~~l~~~l~~e~~~~~v~  224 (281)
T d1w68a_         166 EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVR  224 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhHHHHHHHHHHHHHhhcccchHHHHH
Confidence            6543322 111111222223577999999999999999999999999998887765543

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=95.87  E-value=0.06  Score=45.46  Aligned_cols=110  Identities=15%  Similarity=0.189  Sum_probs=88.9

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+..+.|.+....||..|+..|-+|+.. -|.++...++.         -++....++...|-...-.|.....++.++.
T Consensus        43 l~g~a~~f~~~s~EE~~Ha~~l~~yi~~rgg~~~~~~i~~---------~~~~~~~s~~e~~~~al~~Ek~v~~~l~~l~  113 (171)
T d1rcda_          43 LSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEK---------PERDDWANGLEALQTALKLQKSVNQALLDLH  113 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCC---------CSCSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecccCC---------CCCccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999984 44455432221         1222234788889999999999999999999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                      ++|...+|+.+...+. .+-.++..|.+.+.+++..+-.+.
T Consensus       114 ~~a~~~~D~~~~~fle~~fl~eQ~e~~~~l~~~l~~l~~~~  154 (171)
T d1rcda_         114 AVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLW  154 (171)
T ss_dssp             HHHHHTTCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999875 588888889999999998877653

>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.091  Score=48.85  Aligned_cols=173  Identities=17%  Similarity=0.182  Sum_probs=98.5

Q ss_pred             CCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHHh----hhccCh-hhHHHHhhhhcCCcccCCCCchhHH
Q 016490           81 KSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGEM----ITEEAL-PTYQTMLNSLDGVRDETGASLTSWA  155 (388)
Q Consensus        81 ~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~~----iTEd~L-PtY~~~L~~~~gvr~~~g~~~~~w~  155 (388)
                      .-|.|.+ +|-+       ..+++|.    +|+++-.-++...+    ..+... -.+...+...+        ..+++.
T Consensus        46 ~fW~p~E-i~ls-------~D~~dw~----~L~~~Ek~~~~~~l~~f~~~D~~v~~~~~~~~~~~~--------~~pE~~  105 (339)
T d1mxra_          46 FFWRPEE-VDVS-------RDRIDYQ----ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLI--------SIPELE  105 (339)
T ss_dssp             TCCCGGG-SCCT-------THHHHHH----TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGB--------CSHHHH
T ss_pred             CCCCccc-ccch-------hhHHHHH----HCCHHHHHHHHHHHHHHHHhhHHHhcccHHHHHHhc--------CCHHHH
Confidence            4899999 5653       2244553    46666554443322    111111 01222233333        367889


Q ss_pred             HHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHH-------------HHHHhc-------------CCCCCCC-----
Q 016490          156 TWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSI-------------QYLIRS-------------GMDHKFE-----  204 (388)
Q Consensus       156 ~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~-------------~~li~~-------------G~~~~~~-----  204 (388)
                      .....+..+|+.|+.+-..++..-+ -|++......             ......             +-.....     
T Consensus       106 ~~~~~q~~~E~iH~~sYs~il~~l~-~d~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (339)
T d1mxra_         106 TWVETWAFSETIHSRSYTHIIRNIV-NDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTV  184 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTC-SCHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHCSEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHhcHHHHHHHHHHHHHHHHHHhhHHHHHhccccccccccccccc
Confidence            9999999999999999888886322 2554322110             000000             0000000     


Q ss_pred             ------CCchhhHHHHHhhhhhhHHHHH-HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHH
Q 016490          205 ------NNPYNGFVYASFQERATFISHG-NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTI  274 (388)
Q Consensus       205 ------~~p~~~l~y~sfQE~AT~i~y~-ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~  274 (388)
                            ..-+..+++.++.|..-+.+.= -+--+++.--=|-++++...|++||.+|..|...+++.+.+..++...
T Consensus       185 ~~~~~~~~~~~~l~~~~~lEGi~f~ssF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~~~~~l~~~l~~~~~~~~~  261 (339)
T d1mxra_         185 SLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEM  261 (339)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhccccccHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCChhhH
Confidence                  0113356777777876554322 122232222358899999999999999999999999999987665433

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.67  E-value=0.09  Score=42.55  Aligned_cols=96  Identities=8%  Similarity=0.020  Sum_probs=70.5

Q ss_pred             HHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCC-CCCchhhHHHHHhhhhhhHHHHHHHHHHHhhh
Q 016490          157 WIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKF-ENNPYNGFVYASFQERATFISHGNTARLVKEH  235 (388)
Q Consensus       157 W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~-~~~p~~~l~y~sfQE~AT~i~y~ntarla~~~  235 (388)
                      -+..=..+|.+|-+.|.+-+.-.|...+..         .++|.... ..++...+.+...-|..+...|+....   ..
T Consensus        38 ~~~~~~~~e~~H~~~L~~~i~~lgg~p~~~---------~~~~~~~~~~td~~~~l~~a~~~E~~a~~~Y~~~~~---~~  105 (142)
T d2ib0a1          38 LVADALKQHRHRRDDVIVMLSARGVTAPIA---------AAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVE---HA  105 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCCCC---------CSSCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCcc---------ccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence            344446678899999998887545432221         24454432 235667777777889988888887554   57


Q ss_pred             CCHHHHHHHhHhhhhhhHHHHHHHHHHHH
Q 016490          236 GDMKLAQICGTIASDEKRHETAYTKIVEK  264 (388)
Q Consensus       236 gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~  264 (388)
                      .||.++.++..|..||.||...++.++..
T Consensus       106 ~d~~~r~la~~il~~ea~ha~~~r~~~~~  134 (142)
T d2ib0a1         106 ETADDRVFASTALTESAVMATRWNRVLGA  134 (142)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999888754

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.61  E-value=0.09  Score=44.71  Aligned_cols=109  Identities=12%  Similarity=0.095  Sum_probs=86.3

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHh-HhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~-vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+..+.|.+....||..|+.-|-+|+. .-|.++...+..         .+.....++...|-...=+|..+..++.++.
T Consensus        43 l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~---------~~~~~~~~~~~~~~~aL~~Ek~v~~~l~~l~  113 (179)
T d1lb3a_          43 LEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDVQK---------PSQDEWGKTQEAMEAALAMEKNLNQALLDLH  113 (179)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCC---------CSCSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCCC---------CCCcccCChhHHHHHHHHHHHHHHHHHHHHH
Confidence            568999999999999999999999998 445556533321         1111123677777778889999999999999


Q ss_pred             HHHhhhCCHHHHHHHh-HhhhhhhHHHHHHHHHHHHHHhh
Q 016490          230 RLVKEHGDMKLAQICG-TIASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       230 rla~~~gdPvLa~I~~-~IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      ++|...+|+.+...+. .+=..+.-|.+...+++..+-.+
T Consensus       114 ~~A~~~~D~~t~~fL~~~fl~eQ~e~~~~l~~~l~~l~ri  153 (179)
T d1lb3a_         114 ALGSARADPHLCDFLESHYLDKEVKLIKKMGNHLTNLRRV  153 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999884 67777888999999888887554

>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.43  E-value=0.089  Score=47.83  Aligned_cols=116  Identities=13%  Similarity=0.012  Sum_probs=76.7

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHH-------------hHHHHHHHHhcCCCCCCCCCchhhHHHHHhh
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQ-------------IERSIQYLIRSGMDHKFENNPYNGFVYASFQ  217 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~-------------lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ  217 (388)
                      .++...+...+..+|+.|+.+-...+-.-+  +...             +.+.. ..+...++.   .+++..+++..+-
T Consensus        79 ~~E~~~~~~~q~~~E~iH~~~Ys~il~~l~--~~~e~~~~~~~~~~~~~l~~k~-~~~~~~~~~---~~~l~~~i~~~~l  152 (283)
T d1r2fa_          79 TPHEEAVLSNISFMEAVHARSYSSIFSTLC--QTKEVDAAYAWSEENPPLQRKA-QIILAHYVS---DEPLKKKIASVFL  152 (283)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHCHHHHHHH-HHHHHHHHS---SCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHhhhHHHHHHH-HHHHHHhhc---chHHHHHHHHHHH
Confidence            678888999999999999999887776322  2221             11111 122222322   2556666666777


Q ss_pred             hhhhHHH----HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHH
Q 016490          218 ERATFIS----HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTIL  275 (388)
Q Consensus       218 E~AT~i~----y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~  275 (388)
                      |..-+.+    --++++   .--=|-++++...|++||.+|..|...+++.++...|.....
T Consensus       153 EGi~F~s~F~~~~~~~~---~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~e~~~~~~~  211 (283)
T d1r2fa_         153 ESFLFYSGFWLPMYFSS---RGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIERE  211 (283)
T ss_dssp             HHTTTHHHHHHHHHHHH---TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred             HHHHHHhhHHHHHHHHH---cCcchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhHHHHh
Confidence            7732221    112222   122577899999999999999999999999999998866443

>d1mtyd_ a.25.1.2 (D:) Methane monooxygenase hydrolase alpha subunit {Methylococcus capsulatus [TaxId: 414]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Methane monooxygenase hydrolase alpha subunit
species: Methylococcus capsulatus [TaxId: 414]

Probab=95.27  E-value=0.029  Score=56.06  Aligned_cols=105  Identities=17%  Similarity=0.159  Sum_probs=65.5

Q ss_pred             hhhhhhhhHH---HHhHHhH-------------hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHh-hhh-hhHH
Q 016490          162 TAEENRHGDL---LNKYLYL-------------SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASF-QER-ATFI  223 (388)
Q Consensus       162 tAEEnRHG~a---Lr~YL~v-------------sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sf-QE~-AT~i  223 (388)
                      +.-|.||+.+   +++|+..             +...+|..  .....++...+--   .++...++...| .|. -|..
T Consensus       127 t~DE~RH~q~~a~~~~~l~~~~~d~~~~~~~r~~~~~~Pi~--q~~r~lfed~l~~---~Dw~e~~ial~~v~E~~ftnL  201 (512)
T d1mtyd_         127 VLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTIGPLW--KGMKRVFSDGFIS---GDAVECSLNLQLVGEACFTNP  201 (512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCCTTTTTHHHHGGGSSHH--HHHHHHHTHHHHS---SCHHHHHHHHTTTHHHHTHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHhcCCCcchhhhhhhhhccCchh--HHHHHHHHHHHhc---CCHHHHHHhhhhhhhhcccHH
Confidence            4679999999   8888753             12223321  1111222222211   245555554443 342 2334


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCch
Q 016490          224 SHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD  272 (388)
Q Consensus       224 ~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~  272 (388)
                      .-..++..|...||+++..+...|-+||.||...=...+ ..+..||+.
T Consensus       202 ~fv~f~~~Aa~nGD~~~~tl~~SiqsDEaRH~~~g~~tL-~~~l~~~~n  249 (512)
T d1mtyd_         202 LIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTV-VSIANDPAS  249 (512)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTSHHH
T ss_pred             HHHHHHHHHHHccCccHHHHHHHHHhhHhhhhhhhHHHH-HHHHhccch
Confidence            444456677789999999999999999999999998888 556677764

>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Chlamydia trachomatis [TaxId: 813]

Probab=94.98  E-value=0.62  Score=42.44  Aligned_cols=173  Identities=16%  Similarity=0.123  Sum_probs=96.8

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHHHHH---hhhccChhhH--HHHhhhhcCCcccCCCCchhH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVLVGE---MITEEALPTY--QTMLNSLDGVRDETGASLTSW  154 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~Lv~~---~iTEd~LPtY--~~~L~~~~gvr~~~g~~~~~w  154 (388)
                      ..-|.|.+ +|-+       ..+.+|+-  .+||++-.-++...   +.+.|.+-+-  ...+.....        .+++
T Consensus        47 ~~fW~peE-i~ls-------~D~~dw~~--~kL~~~e~~~~~~~l~~~~~~d~~v~~~~~~~l~~~i~--------~pE~  108 (317)
T d1syya_          47 ANNWLPTE-IPMG-------KDIELWKS--DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVT--------NPEA  108 (317)
T ss_dssp             HTCCCGGG-SCCH-------HHHHHHHS--SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC--------CHHH
T ss_pred             HcCCCccc-cCcc-------ccHHHHhh--CCCCHHHHHHHHHHHHHHHHHhhHHhhhhHhhhcccCC--------cHHH
Confidence            34899999 5552       33445532  35777655544433   3333443321  122333332        6788


Q ss_pred             HHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHH---------HHHHHhcCCCCC----CCCC---c-----hhhHHH
Q 016490          155 ATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERS---------IQYLIRSGMDHK----FENN---P-----YNGFVY  213 (388)
Q Consensus       155 ~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~---------~~~li~~G~~~~----~~~~---p-----~~~l~y  213 (388)
                      ..+...|..+|+-|+.+-...+..- ..|+..+...         +...+..-+...    ...+   +     ...+++
T Consensus       109 ~~~~~~q~~~E~iH~~sYs~il~~l-~~d~~e~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (317)
T d1syya_         109 RQYLLRQAFEEAVHTHTFLYICESL-GLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGY  187 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-TCCHHHHTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHH
Confidence            8999999999999999877766532 2355442111         111222222211    1000   1     123344


Q ss_pred             HHhhhhhhHHHHH-HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          214 ASFQERATFISHG-NTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       214 ~sfQE~AT~i~y~-ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      .++.|.--+.+.= .+--+++.--=|-++++...|++||.+|..|...++..+.+..|+
T Consensus       188 ~~~lEgi~F~s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~e  246 (317)
T d1syya_         188 YIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPE  246 (317)
T ss_dssp             HTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhhHHHHhhHHHHHHHHHhhhhHH
Confidence            4555654433211 111122212247899999999999999999999999999988876

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=94.78  E-value=0.025  Score=48.01  Aligned_cols=109  Identities=15%  Similarity=0.172  Sum_probs=72.0

Q ss_pred             chhHHHHHhhhhhhhhhhhHHHHhHHhH-hcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHHHHHHHH
Q 016490          151 LTSWATWIRAWTAEENRHGDLLNKYLYL-SGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTA  229 (388)
Q Consensus       151 ~~~w~~W~~~WtAEEnRHG~aLr~YL~v-sgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i~y~nta  229 (388)
                      -+.++.|.+....||-.|+.-|-+|+.. -|.++...++.         .++....++...|-..-=.|.....++.++.
T Consensus        44 l~g~a~~f~~~s~EE~~HA~~l~~yl~~rgg~~~~~~i~~---------~~~~~~~s~~~~~~~al~~Ek~v~~~l~~l~  114 (173)
T d1bg7a_          44 LHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVQK---------PERDEWGNTLEAMQAALQLEKTVNQALLDLH  114 (173)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCC---------CSCSCCCSHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCC---------CCCCCCCCHhhHHHHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999984 45555544431         2333334788888888889999999999999


Q ss_pred             HHHhhhCCHHHHHHHhH-hhhhhhHHHHHHHHHHHHHHhh
Q 016490          230 RLVKEHGDMKLAQICGT-IASDEKRHETAYTKIVEKLFEI  268 (388)
Q Consensus       230 rla~~~gdPvLa~I~~~-IAaDE~RH~~~Y~~iv~~~le~  268 (388)
                      ++|...+|+.+...+.. +-.++..|.+...+++..+-.+
T Consensus       115 ~~a~~~~D~~~~~fLe~~fl~eQ~e~~~~l~~~l~~l~~~  154 (173)
T d1bg7a_         115 KVGSDKVDPHLCDFLETEYPEEQVKSIKQLGDYITNLKRL  154 (173)
T ss_dssp             -------------------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99988999999998864 8888999999999999887665

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.76  E-value=0.023  Score=45.56  Aligned_cols=56  Identities=18%  Similarity=0.165  Sum_probs=46.2

Q ss_pred             hhhHHHHHh-hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHH
Q 016490          208 YNGFVYASF-QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLF  266 (388)
Q Consensus       208 ~~~l~y~sf-QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~l  266 (388)
                      +..++-.++ .|..+..+|..+++   ..++|.+++++.+||.||.+|...+.++++...
T Consensus        12 l~e~l~~ai~~E~~a~~~Y~~~a~---~~~~~~~~~~f~~la~eE~~H~~~~~~~~~~~~   68 (158)
T d2fzfa1          12 LEELLGMAIKAEIGAREFYKSLAE---KIKIEALKEKINWLAEEEKKHEALLRKLYSQMF   68 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---SCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---HCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            455555554 49999999998665   567999999999999999999999999987643

>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase oxygenase subunit TouA {Pseudomonas stutzeri [TaxId: 316]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Toluene, o-xylene monooxygenase oxygenase subunit TouA
species: Pseudomonas stutzeri [TaxId: 316]

Probab=94.39  E-value=0.32  Score=47.91  Aligned_cols=69  Identities=23%  Similarity=0.246  Sum_probs=52.8

Q ss_pred             CchhhHHHHHhh-hhh-hHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHH
Q 016490          206 NPYNGFVYASFQ-ERA-TFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTI  274 (388)
Q Consensus       206 ~p~~~l~y~sfQ-E~A-T~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~  274 (388)
                      ++...++++.|+ |.+ |...-..++..|...|||+++.+...|-+||.||...=...|+.+++.++...+
T Consensus       183 dw~e~~val~~v~E~~~tnL~~v~f~~~Aa~ngD~l~~tv~~siqsDEaRH~~~~~~~l~~l~e~~~~~~~  253 (491)
T d2inca1         183 DSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVENGKKDEA  253 (491)
T ss_dssp             CHHHHHHHCCCCCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTCHHHH
T ss_pred             CHHHHHHHHHHhHHHhhhHHHHHHHHHHHHhccChhHHHHHHHhhhHHHhhhhccHHHHHHHHhCccHHHH
Confidence            566666666653 432 333344455677789999999999999999999999999999999998876533

>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]

Probab=93.27  E-value=0.77  Score=42.53  Aligned_cols=174  Identities=12%  Similarity=0.058  Sum_probs=96.5

Q ss_pred             cCCCCCCCCCCCCccccChHHHHHHHHHhhcCCCHHHHHHH---HHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHH
Q 016490           80 DKSWQPTDFLPESEASEGFFEQVKELRERCKQLPAEYFVVL---VGEMITEEALPTYQTMLNSLDGVRDETGASLTSWAT  156 (388)
Q Consensus        80 ~~~WqP~D~lPw~~~~~~F~~~~~~~r~~~~~Lpdd~~v~L---v~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~  156 (388)
                      ..-|.|.+ +|-+       ..+.+|..   .|+++-..++   .+....-|.+-+  ..|...+..  .  ...++...
T Consensus        80 ~~fW~peE-Idls-------~D~~dw~~---~Lt~~Er~~i~~il~ffa~~D~~v~--~~l~~~~~~--~--v~~pE~~~  142 (334)
T d1jk0a_          80 ASFWTAEE-IDLS-------KDIHDWNN---RMNENERFFISRVLAFFAASDGIVN--ENLVENFST--E--VQIPEAKS  142 (334)
T ss_dssp             TTCCCGGG-CCCT-------THHHHHHH---TCCHHHHHHHHHHHHHHHTTSSHHH--HHHCCCCCT--S--CCCHHHHH
T ss_pred             HcCCCchh-ccCc-------CCHHHHhh---cCCHHHHHHHHHHHHHHHhhhHHHH--hHHHHhhhH--H--hchHHHHH
Confidence            45898888 6553       22445543   5766544433   222222233322  223222210  0  13678899


Q ss_pred             HHhhhhhhhhhhhHHHHhHHhHhcCCChHHhH-------------HHHHHHHhcCCCCCCCCCchhhHHHHHhhhhhhHH
Q 016490          157 WIRAWTAEENRHGDLLNKYLYLSGRVDMKQIE-------------RSIQYLIRSGMDHKFENNPYNGFVYASFQERATFI  223 (388)
Q Consensus       157 W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE-------------~~~~~li~~G~~~~~~~~p~~~l~y~sfQE~AT~i  223 (388)
                      +...+..+|+.|+.+-..++-.-+ -|+...+             +...... ..+... ...-...+++-++.|.--+.
T Consensus       143 ~~~~q~~~E~IHsesYS~ii~tl~-~d~~e~~~lf~~~~~~~~i~~k~~~~~-~~~~~~-~~~~~~~lva~~~lEgi~F~  219 (334)
T d1jk0a_         143 FYGFQIMIENIHSETYSLLIDTYI-KDPKESEFLFNAIHTIPEIGEKAEWAL-RWIQDA-DALFGERLVAFASIEGVFFS  219 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHTTCHHHHHHHHHHH-HHTTSS-SCCHHHHHHHHHHHHHTTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHCHHHHHHHHHHH-Hhhhhh-hHHHHHHHHHHHHHhHHhhh
Confidence            999999999999998777765211 2554421             1111122 223222 11223567777777753322


Q ss_pred             H-HHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchH
Q 016490          224 S-HGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDT  273 (388)
Q Consensus       224 ~-y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t  273 (388)
                      + +.-+--+++.--=|-+.++...|++||.+|..|...++..+....+...
T Consensus       220 ssFa~~~~l~~~g~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~  270 (334)
T d1jk0a_         220 GSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAI  270 (334)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHH
T ss_pred             hhHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence            1 2222222222235889999999999999999999999988765555443

>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Lactobacillus plantarum [TaxId: 1590]

Probab=93.22  E-value=0.75  Score=41.93  Aligned_cols=109  Identities=13%  Similarity=0.196  Sum_probs=74.8

Q ss_pred             HHHHHhhhhhhhhhhhHHHHhHHh-HhcCC--ChHHhHHH-----------HHHHHhcCCCCCC---------------C
Q 016490          154 WATWIRAWTAEENRHGDLLNKYLY-LSGRV--DMKQIERS-----------IQYLIRSGMDHKF---------------E  204 (388)
Q Consensus       154 w~~W~~~WtAEEnRHG~aLr~YL~-vsgrv--Dp~~lE~~-----------~~~li~~G~~~~~---------------~  204 (388)
                      ...-+..=+.||-.|=..|..=+. +.+.+  +++.....           .++.+..|-.+..               .
T Consensus        55 ~~dll~dIatEEl~HlEmvat~I~~Ll~~~~~~~~~~~~~~~~~~~~~G~~p~~~~~~g~g~~~~ds~G~pWt~~Yv~~~  134 (266)
T d1jkva_          55 YKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSS  134 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHCTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhhcccchhHHHHhcCCCcceeeeccCcccccCCCCCCCCccccccC
Confidence            444556667899999888877775 44433  23332220           1233444432221               1


Q ss_pred             CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          205 NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       205 ~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      .++..-|-.-..=|..-.+-|.++.+   .++||..+++|.+|..||..|...|.+.++.+
T Consensus       135 Gnl~~DL~~NiaAE~~Ar~~Y~rl~~---~tdDp~vk~~L~fL~~rE~~H~~~f~~aLe~l  192 (266)
T d1jkva_         135 GNLVADMRFNVVRESEARLQVSRLYS---MTEDEGVRDMLKFLLARETQHQLQFMKAQEEL  192 (266)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH---hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            14566677777778888888988665   58999999999999999999999999988865

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=90.40  E-value=0.3  Score=38.52  Aligned_cols=56  Identities=14%  Similarity=0.070  Sum_probs=47.6

Q ss_pred             hHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          210 GFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       210 ~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      -+-+.--.|.-...+|..++..++..|.|.++.+...+|.+|.+|...+..++..+
T Consensus         6 ~L~~Ai~~E~~a~~~Y~~~a~~~~~~~~~~~~~~f~~la~eE~~H~~~l~~~~~~~   61 (152)
T d2oh3a1           6 FLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRAL   61 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34455557888999999988888778899999999999999999999998877664

>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: half-ferritin
domain: Hypothetical protein NE0167
species: Nitrosomonas europaea [TaxId: 915]

Probab=90.13  E-value=0.23  Score=38.76  Aligned_cols=48  Identities=21%  Similarity=0.248  Sum_probs=37.5

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCC
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDP  270 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dp  270 (388)
                      -|.-.--.|..   +|..+.||.+++|+..|+.+|+.|+.-|.+.+++   .||
T Consensus        26 ~EleAI~~Y~q---~a~~t~d~~~k~Vl~hia~EEkeH~g~~LelLrr---~Dp   73 (91)
T d1zpya1          26 EELEAVDLYNQ---RVNACKDKELKAILAHNRDEEKEHAAMLLEWIRR---CDP   73 (91)
T ss_dssp             HHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCH
T ss_pred             HHHHHHHHHHH---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCH
Confidence            34444445776   4556899999999999999999999998887754   566

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.59  E-value=0.22  Score=40.29  Aligned_cols=100  Identities=15%  Similarity=0.082  Sum_probs=65.0

Q ss_pred             hHHHHHhh-hhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhCCchHHHHHHHHHhhccCCC
Q 016490          210 GFVYASFQ-ERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP  288 (388)
Q Consensus       210 ~l~y~sfQ-E~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~dpd~t~~Aia~vm~~~i~MP  288 (388)
                      .....+|- |.....-|.--+++++.-|-|.++++...+|.+|..|...+.+.+..   +..  +..-+...+...    
T Consensus         9 ~~L~~A~~gE~~A~~~Y~~~A~~a~~~G~~~lA~~f~~~A~eE~~HA~~~~~~i~~---l~~--~~~~L~~~~~~e----   79 (133)
T d1nnqa1           9 KFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGK---LGK--TPENLQMGIEGE----   79 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCC--HHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhh--HHhhhHHHHHHh----
Confidence            33444443 55555668888999999999999999999999999999988776633   211  122222222100    


Q ss_pred             CCcCCCCCCcchhhhHHHHHHHhcCCChhh-HHHHH
Q 016490          289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQD-YADIL  323 (388)
Q Consensus       289 ~~~m~dg~~~~lf~~~s~va~r~GvYt~~d-y~dIl  323 (388)
                        .   ..-...|..|+..+++.|-++..+ ...|+
T Consensus        80 --~---~e~~~~Y~e~~~~a~~egd~~~a~~f~~i~  110 (133)
T d1nnqa1          80 --T---FEVEEMYPVYNKAAEFQGEKEAVRTTHYAL  110 (133)
T ss_dssp             --H---HHHHTHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             --H---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence              0   011246788899999999877766 33344

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=89.08  E-value=0.29  Score=38.68  Aligned_cols=53  Identities=11%  Similarity=0.071  Sum_probs=43.7

Q ss_pred             hhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          209 NGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       209 ~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      ..+.+..-.|..+.-+|..+++   .. +|.++.+...||.+|..|...+.++++.+
T Consensus         9 e~l~~Ai~~E~~~~~~Y~~~a~---~~-~~~~~~~f~~la~eE~~H~~~l~~~~~~~   61 (149)
T d1vjxa_           9 DILTVAIRLEEEGERFYRELSE---HF-NGEIKKTFLELADQERIHAEIFRKMSDQE   61 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---SC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---hC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4455666789999999997544   34 66789999999999999999999988875

>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Streptococcus suis [TaxId: 1307]

Probab=86.79  E-value=2.4  Score=34.00  Aligned_cols=112  Identities=11%  Similarity=0.056  Sum_probs=77.5

Q ss_pred             CCCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHH-HHHhhhhhhHHHH
Q 016490          147 TGASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFV-YASFQERATFISH  225 (388)
Q Consensus       147 ~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~-y~sfQE~AT~i~y  225 (388)
                      .|.++..+...+...-.|+..|.|.+...+.-=|..-+..++............+... .....++ .-.-.+......+
T Consensus        30 ~G~~F~~lH~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~~~~~~~s~i~e~~~~~~-~~~~~ml~~~~~~~~~~~~~~  108 (151)
T d1umna_          30 RGRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYN-VTIEEQLARVVEVFRYLAALF  108 (151)
T ss_dssp             CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTT-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHccCccccCCCC-CCHHHHHHHHHHHHHHHHHHH
Confidence            3456778888899999999999999999999767776666666644433332222111 1233333 3333455666678


Q ss_pred             HHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHH
Q 016490          226 GNTARLVKEHGDMKLAQICGTIASDEKRHETAYT  259 (388)
Q Consensus       226 ~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~  259 (388)
                      +.+.++|...||++.+.++.-|..+...|-=+.+
T Consensus       109 ~~~~~~a~~~~D~~t~dll~~i~~~~Ek~~WmL~  142 (151)
T d1umna_         109 QKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQ  142 (151)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888889999999999999987766654443

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.90  E-value=1.5  Score=34.43  Aligned_cols=49  Identities=18%  Similarity=0.193  Sum_probs=42.5

Q ss_pred             hhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHH
Q 016490          217 QERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL  265 (388)
Q Consensus       217 QE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~  265 (388)
                      -|.....-|...+..++.-|-|-+++....+|.+|..|...+.+++..+
T Consensus        17 ~E~~A~~~Yl~~A~~~~~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~l   65 (135)
T d1yuza1          17 GETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEM   65 (135)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHCCChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4666677788888888888999999999999999999999998888754

>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Thermus thermophilus [TaxId: 274]

Probab=83.47  E-value=1.2  Score=41.25  Aligned_cols=113  Identities=19%  Similarity=0.186  Sum_probs=77.2

Q ss_pred             HHHHHhhhhhhhhhhhHHHHhHHh--Hhc--------CCChHHh--H-----HHHHHHHhcCCCCCCC------------
Q 016490          154 WATWIRAWTAEENRHGDLLNKYLY--LSG--------RVDMKQI--E-----RSIQYLIRSGMDHKFE------------  204 (388)
Q Consensus       154 w~~W~~~WtAEEnRHG~aLr~YL~--vsg--------rvDp~~l--E-----~~~~~li~~G~~~~~~------------  204 (388)
                      ...-+..=+.||-.|=..|..=+.  +.+        .+||+.-  .     ..-+|.+..|--+...            
T Consensus        59 ~~dll~dIatEEl~HlEmvat~I~~Ll~~~p~~~~~~~~dp~~~~~~~~~~~~n~~h~i~~g~g~~~~ds~G~pWt~~Yv  138 (299)
T d2cwla1          59 YYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPESAPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYV  138 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCSCCCCCCGGGCTTGGGGSSSCSHHHHTSSSSCCSBCTTSCBCBGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHhhccCchhhHHHhhhccCChhhhhccCCCCCccCCCCCcCCcccc
Confidence            444455567899999888877664  322        2344421  0     0023445444433221            


Q ss_pred             ---CCchhhHHHHHhhhhhhHHHHHHHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHHHHHHHHHhhC
Q 016490          205 ---NNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEID  269 (388)
Q Consensus       205 ---~~p~~~l~y~sfQE~AT~i~y~ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~~iv~~~le~d  269 (388)
                         .++..-|-.-..=|..-.+-|.++.+   .++||..+.+|+.|..||..|+..|.+.++.+-..+
T Consensus       139 ~~sGnl~aDL~~Ni~aE~~Ar~~y~rl~~---~tdDp~vkd~L~fLi~RE~~H~~~f~~ALe~l~g~~  203 (299)
T d2cwla1         139 FTSGNLILDLLHNFFLEVAARTHKLRVYE---MTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVE  203 (299)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence               14555677777788888888988665   589999999999999999999999999999986544

>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Listeria innocua [TaxId: 1642]

Probab=81.61  E-value=5.5  Score=31.54  Aligned_cols=111  Identities=8%  Similarity=0.000  Sum_probs=74.5

Q ss_pred             CCCchhHHHHHhhhhhhhhhhhHHHHhHHhHhcCCChHHhHHHHHHHHhcCCCCCCCCCchhhHHHH-HhhhhhhHHHHH
Q 016490          148 GASLTSWATWIRAWTAEENRHGDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYA-SFQERATFISHG  226 (388)
Q Consensus       148 g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~vsgrvDp~~lE~~~~~li~~G~~~~~~~~p~~~l~y~-sfQE~AT~i~y~  226 (388)
                      |..+...-..+...--|+..|.|.+...+.--|..-|..++................ .....++-. .-.+......++
T Consensus        30 G~~F~~lH~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~i~e~~~~~~-~~~~~~l~~l~~~~~~~~~~~~  108 (150)
T d2bk6a1          30 GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKP-KTMDQLMEDLVGTLELLRDEYK  108 (150)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHccCcccCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence            345667777888999999999999999999767776666666644433332222211 223444433 334444455677


Q ss_pred             HHHHHHhhhCCHHHHHHHhHhhhhhhHHHHHHH
Q 016490          227 NTARLVKEHGDMKLAQICGTIASDEKRHETAYT  259 (388)
Q Consensus       227 ntarla~~~gdPvLa~I~~~IAaDE~RH~~~Y~  259 (388)
                      .+.++|.+.||++.+.++.-|-.+...|-=++.
T Consensus       109 ~~~~~a~~~~D~~t~dll~~i~~~~Ek~~W~L~  141 (150)
T d2bk6a1         109 QGIELTDKEGDDVTNDMLIAFKASIDKHIWMFK  141 (150)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            777888888999999999999888665544443

>d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Methane monooxygenase hydrolase beta subunit
species: Methylosinus trichosporium [TaxId: 426]

Probab=81.44  E-value=6.5  Score=37.12  Aligned_cols=148  Identities=7%  Similarity=-0.045  Sum_probs=90.7

Q ss_pred             cCCCHHHHH-----HHHHHhhhccChhhHHHHhhhhcCCcccCCCCchhHHHHHhhhhhhhhhhhHHHHhHHh-H---hc
Q 016490          110 KQLPAEYFV-----VLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRHGDLLNKYLY-L---SG  180 (388)
Q Consensus       110 ~~Lpdd~~v-----~Lv~~~iTEd~LPtY~~~L~~~~gvr~~~g~~~~~w~~W~~~WtAEEnRHG~aLr~YL~-v---sg  180 (388)
                      ..|++....     .|..-...|-++=.=+.+++....        .+.+....---+.-|.||+.-|..|.. +   .+
T Consensus       127 ~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a~i~r~a~--------~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~  198 (383)
T d1mhyb_         127 RTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVGRDCL--------SDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVP  198 (383)
T ss_dssp             GGSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCS--------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred             ccCCHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhcC--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            466665442     233444455544433333333322        445666666777889999887776533 2   22


Q ss_pred             CCC-------------hHH--hHHHHHHHHhcCCCCCCCCCchhhHHHHHhh-h-hhhHHHHHHH-HHHHhhhCCHHHHH
Q 016490          181 RVD-------------MKQ--IERSIQYLIRSGMDHKFENNPYNGFVYASFQ-E-RATFISHGNT-ARLVKEHGDMKLAQ  242 (388)
Q Consensus       181 rvD-------------p~~--lE~~~~~li~~G~~~~~~~~p~~~l~y~sfQ-E-~AT~i~y~nt-arla~~~gdPvLa~  242 (388)
                      .+|             |..  +.+.++..+..++|.      ...+++..|+ | .-|...++.+ .++|...||.++..
T Consensus       199 gf~~~~~~~k~~W~~dp~WQ~~R~~vE~~lva~~Dw------~E~~vA~NlV~e~ll~~L~~~~f~~~~Aa~nGD~~t~~  272 (383)
T d1mhyb_         199 GFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDW------NEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPF  272 (383)
T ss_dssp             TCCCCSHHHHHHHHHCGGGHHHHHHHHHHHHSCCCH------HHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHH
T ss_pred             CCChhhHHHHHHHhcCHhHHHHHHHHHHHHhcCccH------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCchhHH
Confidence            221             111  233344444444443      4444444433 3 3355667765 66777889999999


Q ss_pred             HHhHhhhhhhHHHHHHHHHHHHHHhhCCc
Q 016490          243 ICGTIASDEKRHETAYTKIVEKLFEIDPD  271 (388)
Q Consensus       243 I~~~IAaDE~RH~~~Y~~iv~~~le~dpd  271 (388)
                      +..-+-.||.||..-=..+|+.+++.||+
T Consensus       273 l~~s~q~D~~R~~~w~~alvk~~l~~d~e  301 (383)
T d1mhyb_         273 FTAQSQTYFQTTRGAIDDLFVYCLANDSE  301 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCCTCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            99999999999999999999889988885