Citrus Sinensis ID: 016502

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39

MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

cccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHcccccEEEEccccccccHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHccccccEEEEcccEEEccccccccccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccc

ccHHHHcccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccEEEEEcccccHHHEEcccccccHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHEEEEEEcccccccHHHcccHHHHHHHHHHHHHHHcccccccccHHHcEEEEEHHHcccccc

meselkdlnskqlkstassddggsakddrpllkpdaADNIQELEKKFapyvrndvygtmgrgelplAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCtlfsapnrgedeqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKseneaknqskdedeakdqdeesgrpgaiisNHVSYLDILYhmsssfpsfvaKRSVAKLPLVGLISKCLgcvyvqreskssdfkgvsgVVTERVReahrdksapmmmlfpegtttngdyllpfktgaflarapvlpvilrypyqrfspawdsisgARHVFFLLCQFVNhievtslpvyhpsqqekddpkLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

meselkdlnskqlkstassddggsakddrpllkpdaadniqelekkfapyvrnDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVqekseneaknqskdedeakdqdeesgrpgaIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYvqreskssdfkgvsgvvtervreahrdksapmmMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPvyhpsqqekddPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

MESELKDLNSKQLkstassddggsakddRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNqskdedeakdqdeesGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

*******************************************EKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAP********DYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDV*****************************AIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQR******************************MLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYH***********YAENVRRLMASERNLILSDIGLAEKRIYHAALNGL****

*********************************************KFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRES************TERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHA**NGL****

***************************DRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEK***********************RPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

************************************ADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLL***

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MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVxxxxxxxxxxxxxxxxxxxxxDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		388	2.2.26 [Sep-21-2011]
Q1LWG4		517	Lysophosphatidylcholine a	no	no	0.708	0.531	0.302	2e-31
Q8NF37		534	Lysophosphatidylcholine a	yes	no	0.726	0.528	0.308	3e-30
Q1HAQ0		534	Lysophosphatidylcholine a	yes	no	0.778	0.565	0.288	1e-29
Q3TFD2		534	Lysophosphatidylcholine a	yes	no	0.773	0.561	0.289	3e-29
Q0KHU5		533	1-acylglycerophosphocholi	yes	no	0.675	0.491	0.313	5e-29
Q28C60		522	Lysophospholipid acyltran	no	no	0.636	0.473	0.309	2e-28
Q6DCK1		522	Lysophospholipid acyltran	N/A	no	0.634	0.471	0.307	2e-27
Q8BYI6		544	Lysophosphatidylcholine a	no	no	0.703	0.501	0.281	2e-27
Q7L5N7		544	Lysophosphatidylcholine a	no	no	0.713	0.509	0.271	8e-26
P0C1Q3		544	Lysophosphatidylcholine a	no	no	0.590	0.420	0.292	4e-25

>sp\|Q1LWG4\|PCAT1_DANRE Lysophosphatidylcholine acyltransferase 1 OS=Danio rerio GN=lpcat1 PE=2 SV=1	Back alignment and function desciption

 Score =  137 bits (344), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 39/314 (12%)

Query: 68  EKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSV 127
           +K  I +  VTL P+R++ A  ++++ +    V T+     R E+  E  +    W R +
Sbjct: 37  QKLKIAVMTVTLFPVRLLFAAFMMLLAWPFAFVATV----GRSENAVEPLS----WWRWL 88

Query: 128 VVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGA 187
           V +  + + R M F  GF+W+                 K +     EA         P  
Sbjct: 89  VDLALKAIMRAMWFSGGFHWV---------------RVKGRPALPSEA---------PIL 124

Query: 188 IISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSG 247
            ++ H SY D +  ++ +  S V K     +P+ G + K +  V+V R  + S  K    
Sbjct: 125 TMAPHSSYFDAI-PVTMTMASIVMKAESKDIPVWGTLIKFIRPVFVSRSDQDSRRK---- 179

Query: 248 VVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQ--RF 305
            V E  R A  +   P +M+FPEGT TN   L+ FK GAF+   PV PV+LRYP +    
Sbjct: 180 TVEEIKRRASSNGEWPQIMIFPEGTCTNRSCLIAFKPGAFIPGVPVQPVVLRYPNELDTI 239

Query: 306 SPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLI 365
           S  W      + ++  LCQ  N +E+  LP Y PS++EK DP L+A NVRR+MA    L 
Sbjct: 240 SWTWQGPGAFKILWLTLCQLHNFVEIEYLPTYTPSEEEKKDPALFASNVRRIMAKALGLP 299

Query: 366 LSDIGLAEKRIYHA 379
           + D    + ++  A
Sbjct: 300 IIDYSFEDCQLAMA 313

Possesses both acyltransferase and acetyltransferase activities. Activity is calcium-independent. Mediates the conversion of 1-acyl-sn-glycero-3-phosphocholine (LPC) into phosphatidylcholine (PC).
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6EC: 7

>sp\|Q8NF37\|PCAT1_HUMAN Lysophosphatidylcholine acyltransferase 1 OS=Homo sapiens GN=LPCAT1 PE=1 SV=2	Back alignment and function description

>sp\|Q1HAQ0\|PCAT1_RAT Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus GN=Lpcat1 PE=2 SV=2	Back alignment and function description

>sp\|Q3TFD2\|PCAT1_MOUSE Lysophosphatidylcholine acyltransferase 1 OS=Mus musculus GN=Lpcat1 PE=1 SV=1	Back alignment and function description

>sp\|Q0KHU5\|PCAT1_DROME 1-acylglycerophosphocholine O-acyltransferase 1 OS=Drosophila melanogaster GN=CG32699 PE=2 SV=1	Back alignment and function description

>sp\|Q28C60\|LPCT4_XENTR Lysophospholipid acyltransferase LPCAT4 OS=Xenopus tropicalis GN=lpcat4 PE=2 SV=1	Back alignment and function description

>sp\|Q6DCK1\|LPCT4_XENLA Lysophospholipid acyltransferase LPCAT4 OS=Xenopus laevis GN=lpcat4 PE=2 SV=2	Back alignment and function description

>sp\|Q8BYI6\|PCAT2_MOUSE Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus GN=Lpcat2 PE=1 SV=1	Back alignment and function description

>sp\|Q7L5N7\|PCAT2_HUMAN Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens GN=LPCAT2 PE=1 SV=1	Back alignment and function description

>sp\|P0C1Q3\|PCAT2_RAT Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus GN=Lpcat2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		388
224137214		402	predicted protein [Populus trichocarpa]	0.979	0.945	0.726	1e-168
356510241		369	PREDICTED: 1-acylglycerophosphocholine O	0.940	0.989	0.741	1e-166
255538570		382	acyltransferase, putative [Ricinus commu	0.963	0.979	0.732	1e-165
224063595		403	predicted protein [Populus trichocarpa]	0.971	0.935	0.719	1e-164
356518056		370	PREDICTED: 1-acylglycerophosphocholine O	0.943	0.989	0.735	1e-164
359492117		374	PREDICTED: lysophosphatidylcholine acylt	0.948	0.983	0.762	1e-159
357511059		382	1-acyl-sn-glycerol-3-phosphate acyltrans	0.951	0.965	0.734	1e-156
357511061		390	1-acyl-sn-glycerol-3-phosphate acyltrans	0.940	0.935	0.734	1e-154
297839841		396	hypothetical protein ARALYDRAFT_477149 [	0.971	0.952	0.666	1e-151
449469993		390	PREDICTED: lysophosphatidylcholine acylt	0.961	0.956	0.689	1e-150

>gi\|224137214\|ref\|XP_002327070.1\| predicted protein [Populus trichocarpa] gi\|222835385\|gb\|EEE73820.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/398 (72%), Positives = 335/398 (84%), Gaps = 18/398 (4%)

Query: 1   MESELKDLNSKQLK----STASSDDGGSAKDDRPLLKPDA-------ADNIQELEKKFAP 49
           M++ELK +N    K      AS DDG ++KDDRPLLK D+        ++I+ELEKKFA 
Sbjct: 1   MDTELKSMNPDPPKPEQPDPASRDDGSNSKDDRPLLKSDSNRISSTTGESIEELEKKFAA 60

Query: 50  YVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNR 109
           YVRNDVYG MGRGELPL EK L+GIA+VTL+PIR VLA+ +LV+YY+ICRVCTLFSAPNR
Sbjct: 61  YVRNDVYGPMGRGELPLVEKVLLGIAVVTLVPIRFVLALIILVVYYIICRVCTLFSAPNR 120

Query: 110 GEDE-QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQ 168
            E+E QED+AHMGGWRR+V+V  GRFLSR++LFVLGFYWI+ ++R +++ ++      N+
Sbjct: 121 DEEEEQEDFAHMGGWRRAVIVWCGRFLSRMLLFVLGFYWISVSYRDIELPDQ------NK 174

Query: 169 SKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCL 228
           S  ++E KDQ EE  R GAIISNHVSYLDILYHMS+SFPSFVAKRSVAKLPLVGLISKCL
Sbjct: 175 SSSQNEGKDQSEEPERLGAIISNHVSYLDILYHMSASFPSFVAKRSVAKLPLVGLISKCL 234

Query: 229 GCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFL 288
           GCVYVQRESKSSDFKGVSG+VTERV+E+H + SAPMMMLFPEGTTTNGD+LLPFKTGAFL
Sbjct: 235 GCVYVQRESKSSDFKGVSGIVTERVKESHENSSAPMMMLFPEGTTTNGDFLLPFKTGAFL 294

Query: 289 ARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPK 348
           A APV PVILRYPYQRFSPAWDSISGA HVF+L CQF+NH+E   LPVY+PSQ+EKDDPK
Sbjct: 295 ATAPVRPVILRYPYQRFSPAWDSISGALHVFYLFCQFINHMEAVWLPVYYPSQEEKDDPK 354

Query: 349 LYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLS 386
           LYA NVRRLMA E NL +SDIGLAEKRIYH ALNG +S
Sbjct: 355 LYASNVRRLMAREGNLKMSDIGLAEKRIYHTALNGNIS 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356510241\|ref\|XP_003523848.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|255538570\|ref\|XP_002510350.1\| acyltransferase, putative [Ricinus communis] gi\|223551051\|gb\|EEF52537.1\| acyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224063595\|ref\|XP_002301219.1\| predicted protein [Populus trichocarpa] gi\|222842945\|gb\|EEE80492.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356518056\|ref\|XP_003527700.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|359492117\|ref\|XP_002283301.2\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Vitis vinifera] gi\|302142453\|emb\|CBI19656.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357511059\|ref\|XP_003625818.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500833\|gb\|AES82036.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357511061\|ref\|XP_003625819.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500834\|gb\|AES82037.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297839841\|ref\|XP_002887802.1\| hypothetical protein ARALYDRAFT_477149 [Arabidopsis lyrata subsp. lyrata] gi\|297333643\|gb\|EFH64061.1\| hypothetical protein ARALYDRAFT_477149 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|449469993\|ref\|XP_004152703.1\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		388
TAIR\|locus:2025807		398	AT1G80950 [Arabidopsis thalian	0.976	0.952	0.654	4.4e-132
UNIPROTKB\|J9NSM6		485	LPCAT1 "Uncharacterized protei	0.451	0.360	0.401	6.9e-35
UNIPROTKB\|F1PJ28		534	LPCAT1 "Uncharacterized protei	0.456	0.331	0.384	1.1e-33
UNIPROTKB\|F1S029		534	LPCAT1 "Uncharacterized protei	0.451	0.327	0.401	5.7e-33
UNIPROTKB\|F1NME3		525	LPCAT1 "Uncharacterized protei	0.448	0.331	0.379	1.1e-32
TAIR\|locus:2043639		539	AT2G45670 [Arabidopsis thalian	0.484	0.348	0.347	3.4e-32
ZFIN\|ZDB-GENE-030131-5777		508	lpcat4 "lysophosphatidylcholin	0.440	0.336	0.406	4.2e-32
UNIPROTKB\|Q8NF37		534	LPCAT1 "Lysophosphatidylcholin	0.451	0.327	0.390	1e-31
ZFIN\|ZDB-GENE-060503-915		517	lpcat1 "lysophosphatidylcholin	0.461	0.346	0.381	1.6e-31
RGD\|1311599		534	Lpcat1 "lysophosphatidylcholin	0.451	0.327	0.384	8e-31

TAIR\|locus:2025807 AT1G80950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
 Identities = 261/399 (65%), Positives = 302/399 (75%)

Query:     1 MESELKDLNSKQLXXXXXXXXXXXXXXXRPLLKP--DAADNIQELEKKFAPYVRNDVYGT 58
             MESELKDLNS                  RPLLK   D A  I+EL+KKFAPY R D+YGT
Sbjct:     1 MESELKDLNSNS--------NPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGT 52

Query:    59 MGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRG----EDE- 113
             MG G  P+ E   + +A+VTL+P+R +L+M++L++YYLICRV TLFSAP RG    EDE 
Sbjct:    53 MGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYYLICRVFTLFSAPYRGPEEEEDEG 112

Query:   114 ----QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNXX 169
                 QEDYAHM GW+R+V+V +GRFLSRV+LFV GFYWI E+    D  +   N      
Sbjct:   113 GVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD-SDMDSNPKTTST 171

Query:   170 XXXXXXXXXXXXXGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLG 229
                           RPGAI+SNHVSYLDILYHMS+SFPSFVAKRSV KLPLVGLISKCLG
Sbjct:   172 EINQKGEAATEEPERPGAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLG 231

Query:   230 CVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLA 289
             CVYVQRE+KS DFKGVSG V ERVREAH +KSAP +MLFPEGTTTNGDYLL FKTGAFLA
Sbjct:   232 CVYVQREAKSPDFKGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLA 291

Query:   290 RAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKL 349
               PVLPVIL+YPY+RFS AWD+ISGARH+ FLLCQ VNH+EV  LPVY+PSQ+EKDDPKL
Sbjct:   292 GTPVLPVILKYPYERFSVAWDTISGARHILFLLCQVVNHLEVIRLPVYYPSQEEKDDPKL 351

Query:   350 YAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS 388
             YA NVR+LMA+E NLILS++GL++KRIYHA LNG LSQ+
Sbjct:   352 YASNVRKLMATEGNLILSELGLSDKRIYHATLNGNLSQT 390

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

UNIPROTKB\|J9NSM6 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PJ28 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1S029 LPCAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NME3 LPCAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

TAIR\|locus:2043639 AT2G45670 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-5777 lpcat4 "lysophosphatidylcholine acyltransferase 4" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8NF37 LPCAT1 "Lysophosphatidylcholine acyltransferase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060503-915 lpcat1 "lysophosphatidylcholine acyltransferase 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

RGD\|1311599 Lpcat1 "lysophosphatidylcholine acyltransferase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1.51	0.737
3rd Layer	2.3.1	0.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		388
cd07991		211	cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt	7e-79
cd07989		184	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr	1e-24
smart00563		118	smart00563, PlsC, Phosphate acyltransferases	1e-23
pfam01553		131	pfam01553, Acyltransferase, Acyltransferase	1e-20
TIGR00530		130	TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp	3e-19
COG0204		255	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl	6e-18
PLN02833		376	PLN02833, PLN02833, glycerol acyltransferase famil	4e-10
PLN02901		214	PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate	3e-09
cd06551		187	cd06551, LPLAT, Lysophospholipid acyltransferases	2e-08
PRK15018		245	PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate	3e-08
cd07992		203	cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy	2e-06
cd07990		193	cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt	3e-06
PRK08633		1146	PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola	3e-04

>gnl\|CDD\|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

 Score =  241 bits (617), Expect = 7e-79
 Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 35/242 (14%)

Query: 137 RVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYL 196
           RV+LF  GFY I                             + +    P  I++NH S++
Sbjct: 2   RVLLFAFGFYVIKV-------------------------HGKPDPPEAPRIIVANHTSFI 36

Query: 197 DILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREA 256
           D L   S  FPS VAK+ + KLP +G I + LGC++V R             V E ++E 
Sbjct: 37  DPLILFSDLFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKD-----RKKVVEEIKER 91

Query: 257 HRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGA- 315
             D + P +++FPEGTTTNG  L+ FK GAF    PV PV +RYP  +F  A+ + SG  
Sbjct: 92  ATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPN-KFVDAFWNSSGYS 150

Query: 316 --RHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAE 373
              ++F LL Q  N +EV  LPVY PS +E +DPK +A  VR +MA++  L  +D    +
Sbjct: 151 SLMYLFRLLTQPANVLEVEFLPVYTPS-EEGEDPKEFANRVRLIMANKLGLPATDWTGED 209

Query: 374 KR 375
           KR
Sbjct: 210 KR 211

Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211

>gnl\|CDD\|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>gnl\|CDD\|214724 smart00563, PlsC, Phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|216567 pfam01553, Acyltransferase, Acyltransferase	Back alignment and domain information

>gnl\|CDD\|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|215447 PLN02833, PLN02833, glycerol acyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>gnl\|CDD\|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>gnl\|CDD\|184979 PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>gnl\|CDD\|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>gnl\|CDD\|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		388
PLN02833		376	glycerol acyltransferase family protein	100.0
cd07991		211	LPLAT_LPCAT1-like Lysophospholipid Acyltransferase	100.0
KOG2848		276	consensus 1-acyl-sn-glycerol-3-phosphate acyltrans	100.0
PRK15018		245	1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr	99.97
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.96
PTZ00261		355	acyltransferase; Provisional	99.95
PLN02588		525	glycerol-3-phosphate acyltransferase	99.94
PLN02177		497	glycerol-3-phosphate acyltransferase	99.93
PLN02499		498	glycerol-3-phosphate acyltransferase	99.93
PRK14014		301	putative acyltransferase; Provisional	99.93
PLN02901		214	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.93
cd07988		163	LPLAT_ABO13168-like Lysophospholipid Acyltransfera	99.91
cd07993		205	LPLAT_DHAPAT-like Lysophospholipid Acyltransferase	99.89
COG0204		255	PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas	99.88
cd07992		203	LPLAT_AAK14816-like Lysophospholipid Acyltransfera	99.88
PLN02783		315	diacylglycerol O-acyltransferase	99.86
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	99.84
cd07986		210	LPLAT_ACT14924-like Lysophospholipid Acyltransfera	99.84
PLN02380		376	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.82
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.82
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.81
PLN02510		374	probable 1-acyl-sn-glycerol-3-phosphate acyltransf	99.81
cd07987		212	LPLAT_MGAT-like Lysophospholipid Acyltransferases	99.79
PRK03355		783	glycerol-3-phosphate acyltransferase; Validated	99.79
TIGR03703		799	plsB glycerol-3-phosphate O-acyltransferase. Membe	99.74
TIGR00530		130	AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra	99.73
PRK04974		818	glycerol-3-phosphate acyltransferase; Validated	99.72
PF01553		132	Acyltransferase: Acyltransferase; InterPro: IPR002	99.71
cd06551		187	LPLAT Lysophospholipid acyltransferases (LPLATs) o	99.71
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.71
cd07985		235	LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA	99.71
cd07990		193	LPLAT_LCLAT1-like Lysophospholipid Acyltransferase	99.7
smart00563		118	PlsC Phosphate acyltransferases. Function in phosp	99.69
PTZ00374		1108	dihydroxyacetone phosphate acyltransferase; Provis	99.68
cd07983		189	LPLAT_DUF374-like Lysophospholipid Acyltransferase	99.66
cd07989		184	LPLAT_AGPAT-like Lysophospholipid Acyltransferases	99.63
PRK11915		621	glycerol-3-phosphate acyltransferase; Reviewed	99.58
KOG2898		354	consensus Predicted phosphate acyltransferase, con	99.57
KOG1505		346	consensus Lysophosphatidic acid acyltransferase LP	99.45
cd07984		192	LPLAT_LABLAT-like Lysophospholipid Acyltransferase	99.29
KOG2847		286	consensus Phosphate acyltransferase [Lipid transpo	99.29
KOG3729		715	consensus Mitochondrial glycerol-3-phosphate acylt	98.83
COG2937		810	PlsB Glycerol-3-phosphate O-acyltransferase [Lipid	98.8
KOG3730		685	consensus Acyl-CoA:dihydroxyactetone-phosphate acy	98.68
PRK08419		298	lipid A biosynthesis lauroyl acyltransferase; Revi	97.67
PLN02349		426	glycerol-3-phosphate acyltransferase	97.54
PRK07920		298	lipid A biosynthesis lauroyl acyltransferase; Prov	97.11
COG2121		214	Uncharacterized protein conserved in bacteria [Fun	96.89
COG1560		308	HtrB Lauroyl/myristoyl acyltransferase [Cell envel	95.21
PF03279		295	Lip_A_acyltrans: Bacterial lipid A biosynthesis ac	94.96
PRK06553		308	lipid A biosynthesis lauroyl acyltransferase; Prov	94.58
PRK06946		293	lipid A biosynthesis lauroyl acyltransferase; Prov	93.65
PF03982		297	DAGAT: Diacylglycerol acyltransferase ; InterPro:	93.62
PRK06628		290	lipid A biosynthesis lauroyl acyltransferase; Prov	92.59
PRK08706		289	lipid A biosynthesis lauroyl acyltransferase; Prov	92.23
PRK05906		454	lipid A biosynthesis lauroyl acyltransferase; Prov	92.17
PRK06860		309	lipid A biosynthesis lauroyl acyltransferase; Prov	91.92
TIGR02207		303	lipid_A_htrB lipid A biosynthesis lauroyl (or palm	91.87
PRK08905		289	lipid A biosynthesis lauroyl acyltransferase; Vali	91.37
PRK05646		310	lipid A biosynthesis lauroyl acyltransferase; Prov	91.21
COG3176		292	Putative hemolysin [General function prediction on	90.99
TIGR02208		305	lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)	90.45
PRK08025		305	lipid A biosynthesis palmitoleoyl acyltransferase;	90.11
PRK08733		306	lipid A biosynthesis lauroyl acyltransferase; Prov	88.83
PRK08943		314	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac	88.31
PRK08734		305	lipid A biosynthesis lauroyl acyltransferase; Prov	87.6
PRK05645		295	lipid A biosynthesis lauroyl acyltransferase; Prov	86.3
KOG0831		334	consensus Acyl-CoA:diacylglycerol acyltransferase	82.79
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	81.65

>PLN02833 glycerol acyltransferase family protein	Back alignment and domain information

Probab=100.00  E-value=5.4e-35  Score=285.02  Aligned_cols=251  Identities=20%  Similarity=0.290  Sum_probs=187.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchhhccccccchhhHHHHHHHHHHHHHHHHhceEEEEEee
Q 016502           73 GIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETF  152 (388)
Q Consensus        73 ~~~~~~l~plR~~l~~~~~~~~~l~~~~~~l~~~p~~~~~~~~~~~~l~~~~r~~~~~~~~~~~r~~l~~~G~~~i~v~~  152 (388)
                      ++.+.+|+|+|+++++++++.+.++..++.++  +..           ...++.....+.+.+++.++...+. .+++++
T Consensus        91 ~~ry~~L~p~R~~~~~~~~~~~~~~~~~v~~~--~~~-----------~~~r~~~~r~~v~~~~~~~~~~~~~-~i~v~G  156 (376)
T PLN02833         91 VIRYGILFPVRVLLLAIGWIIFLSAFIPVHFL--LKG-----------HKLRKKIERKLVELICSAFVASWTG-VIKYHG  156 (376)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCc-----------hHHHHHHHHHHHHHHHHHHHHHhEE-EEEEEC
Confidence            34566799999999998776655544443332  210           1122233333334444433322221 234443


Q ss_pred             eecchhhhhhhhhhccCccchhhccccCCCCCCeEEEecCCchhhHHHhhhccCceEEEccccccchHHH-HHHHhcCce
Q 016502          153 RILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVG-LISKCLGCV  231 (388)
Q Consensus       153 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~iiVsNH~S~lD~l~l~~~~~~~fv~k~~l~~~p~~g-~~~~~~g~i  231 (388)
                      .  +                       ..++++.|+||||+|++|++++.+..+..++++++..+.++++ ++++..|++
T Consensus       157 ~--e-----------------------~~~~~~~IiVaNH~S~lDi~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I  211 (376)
T PLN02833        157 P--R-----------------------PSRRPKQVFVANHTSMIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCI  211 (376)
T ss_pred             C--c-----------------------CCCCCCEEEEECCCChHHHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcE
Confidence            2  1                       1345689999999999999999988888888888877777655 889999999


Q ss_pred             eEecCCCCcccccchHHHHHHHHHHHhCCCCCeEEEEeCceeeCCCcccccccccccCCCcEEEEEEEcCCCCCCCccc-
Q 016502          232 YVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWD-  310 (388)
Q Consensus       232 ~v~R~~~~~~~k~~~~~i~~~l~~~~~~~~~~~v~iFPEGT~sn~~~ll~Fk~Gaf~~~~pIvPV~i~y~~~~~~~~w~-  310 (388)
                      +++|++..+     ...+.+.+++.+++++|.+++|||||||+|++.+++||+|+|..++||+||+|+|+..+....|+ 
T Consensus       212 ~VdR~~~~~-----~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s  286 (376)
T PLN02833        212 WFNRTEAKD-----REVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNS  286 (376)
T ss_pred             EecCCCHHH-----HHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcccccccCC
Confidence            999976532     22445666666665567799999999999999999999999999999999999999877777886 


Q ss_pred             -cccchhHHHHHhhccccEEEEEEcCccCCCCCCCCCHHHHHHHHHHHHHHhhchhcccc
Q 016502          311 -SISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDI  369 (388)
Q Consensus       311 -~~~~~~~~~~~l~~~~~~v~V~~lppi~~~~~~~~~~~~~a~~vr~~ma~~~~~~~~~~  369 (388)
                       ..+...|++++++++...++|+++||+++.  +++++++|++++++.|++.+|++....
T Consensus       287 ~~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~--~~e~~~efA~rv~~~Ia~~lgi~~~~w  344 (376)
T PLN02833        287 RKQSFTMHLLRLMTSWAVVCDVWYLEPQTLR--PGETPIEFAERVRDMIAKRAGLKKVPW  344 (376)
T ss_pred             CCccHHHhHHHHhCCCceEEEEEECCCcCCC--CCCCHHHHHHHHHHHHHHhcCCCCCCC
Confidence             467788999999999999999999998764  357899999999999999999886653

>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>PTZ00261 acyltransferase; Provisional	Back alignment and domain information

>PLN02588 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02177 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02499 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK14014 putative acyltransferase; Provisional	Back alignment and domain information

>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	Back alignment and domain information

>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like	Back alignment and domain information

>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>PLN02783 diacylglycerol O-acyltransferase	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	Back alignment and domain information

>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	Back alignment and domain information

>PRK03355 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase	Back alignment and domain information

>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>PRK04974 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []	Back alignment and domain information

>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT	Back alignment and domain information

>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>smart00563 PlsC Phosphate acyltransferases	Back alignment and domain information

>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional	Back alignment and domain information

>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	Back alignment and domain information

>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed	Back alignment and domain information

>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]	Back alignment and domain information

>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	Back alignment and domain information

>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]	Back alignment and domain information

>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]	Back alignment and domain information

>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]	Back alignment and domain information

>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed	Back alignment and domain information

>PLN02349 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria	Back alignment and domain information

>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ]	Back alignment and domain information

>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	Back alignment and domain information

>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated	Back alignment and domain information

>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>COG3176 Putative hemolysin [General function prediction only]	Back alignment and domain information

>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	Back alignment and domain information

>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed	Back alignment and domain information

>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	Back alignment and domain information

>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism]	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		388
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 53.7 bits (128), Expect = 7e-08
 Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 63/239 (26%)

Query: 148 ITETFRILDVQEKSENEAKNQSKDEDEAKDQD-------EESGRPGAIISNHVSYLDILY 200
           ++ T R+       + E   +  +E    +          E  +P  +   ++   D LY
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 201 HMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDK 260
           + +  F     K +V++L     + + L       E + +    + G             
Sbjct: 121 NDNQVFA----KYNVSRLQPYLKLRQAL------LELRPAKNVLIDG------------- 157

Query: 261 SAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVL---PVILRYPYQRFSPAWDSISGARH 317
                +L   G+   G      KT  ++A   V     V  +  ++ F   W ++     
Sbjct: 158 -----VL---GS---G------KT--WVA-LDVCLSYKVQCKMDFKIF---WLNLKNCNS 194

Query: 318 VFFLLCQFVN---HIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERN----LILSDI 369
              +L         I+         S   K         +RRL+ S+      L+L ++
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		388
1iuq_A		367	Glycerol-3-phosphate acyltransferase; open twisted	99.76

>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A	Back alignment and structure

Probab=99.76  E-value=8.1e-20  Score=174.03  Aligned_cols=177  Identities=17%  Similarity=0.163  Sum_probs=113.0

Q ss_pred             CCCCCCeEEEecCCchhhHHHhhhcc---------CceEEEccccccchHHHHH--HHhcCceeEecCCC------Cccc
Q 016502          180 EESGRPGAIISNHVSYLDILYHMSSS---------FPSFVAKRSVAKLPLVGLI--SKCLGCVYVQRESK------SSDF  242 (388)
Q Consensus       180 ~~~~~~~iiVsNH~S~lD~l~l~~~~---------~~~fv~k~~l~~~p~~g~~--~~~~g~i~v~R~~~------~~~~  242 (388)
                      .+.++++|++|||+|.+|++++...+         +..||+|+++...|++..+  .+.++||+..+.-.      .+..
T Consensus       126 l~~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~  205 (367)
T 1iuq_A          126 LQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKR  205 (367)
T ss_dssp             HHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHH
T ss_pred             ccCCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcCccccchhhhhheeeEEecccCCCcchhhhhhh
Confidence            45678999999999999999988777         3599999999977766433  14456777633211      1111


Q ss_pred             ccchHHHHHHHHHHHhCCCCCeEEEEeCceeeCC----Cc--ccccccccc----c----CCCc--EEEEEEEcCCCCCC
Q 016502          243 KGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNG----DY--LLPFKTGAF----L----ARAP--VLPVILRYPYQRFS  306 (388)
Q Consensus       243 k~~~~~i~~~l~~~~~~~~~~~v~iFPEGT~sn~----~~--ll~Fk~Gaf----~----~~~p--IvPV~i~y~~~~~~  306 (388)
                      +.-..++. .+.+.++.+ |..++|||||||+.+    +.  ..+|+.|+|    .    +++|  |+||+|. ++..+.
T Consensus       206 r~n~ksl~-~~~~~Lk~G-G~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imp  282 (367)
T 1iuq_A          206 KANTRSLK-EMALLLRGG-SQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMP  282 (367)
T ss_dssp             HHHHHHHH-HHHHHHHHC-CCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSC
T ss_pred             HHHHHHHH-HHHHHHHcC-CeEEEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccC
Confidence            11112222 222333332 468999999999985    33  456999998    3    8999  9999999 666554


Q ss_pred             CccccccchhHHHHHhhccccEEEEEEcCccCCCCCC------CCCHHHHHHHHHHHHHHhh
Q 016502          307 PAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQE------KDDPKLYAENVRRLMASER  362 (388)
Q Consensus       307 ~~w~~~~~~~~~~~~l~~~~~~v~V~~lppi~~~~~~------~~~~~~~a~~vr~~ma~~~  362 (388)
                      |.-..-   ..+-......++.|.|.+++||++++..      ++..+++++.+++.|++.+
T Consensus       283 pp~~ve---~~~g~~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y  341 (367)
T 1iuq_A          283 PPSQVE---IEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQY  341 (367)
T ss_dssp             CC-------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cccccc---ccccccceeecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHHHH
Confidence            421000   0000000012468999999999875432      2234568888999998876

PyMOL of 1iuq

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		388
d1iuqa_		367	c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf	9e-07

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

 Score = 48.1 bits (114), Expect = 9e-07
 Identities = 25/142 (17%), Positives = 41/142 (28%), Gaps = 26/142 (18%)

Query: 181 ESGRPGAIISNHVSYLD------ILYHMSSSFP---SFVAKRSVAKLPLVGLISKCLGCV 231
           + G    +ISNH +  D      +L   +        FVA   V   PL    S     +
Sbjct: 127 QQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLI 186

Query: 232 YVQRESKSSDFKGVSGVVT----ERVREAHRDKSAP--MMMLFPEGTTTNGD------YL 279
            V  +    D   ++          ++E          ++ + P G     D      Y 
Sbjct: 187 CVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP 246

Query: 280 LPFKTG-----AFLARAPVLPV 296
            PF          L +   +P 
Sbjct: 247 APFDASSVDNMRRLIQHSDVPG 268

PyMOL of d1iuqa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		388
d1iuqa_		367	Glycerol-3-phosphate (1)-acyltransferase {Cushaw s	99.63

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

Probab=99.63  E-value=1.6e-16  Score=150.89  Aligned_cols=176  Identities=16%  Similarity=0.127  Sum_probs=110.7

Q ss_pred             cCCCCCCeEEEecCCchhhHHHhhhccC---------ceEEEccccccchHHHHHHHhcCceeEecCCCCccc-------
Q 016502          179 DEESGRPGAIISNHVSYLDILYHMSSSF---------PSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDF-------  242 (388)
Q Consensus       179 ~~~~~~~~iiVsNH~S~lD~l~l~~~~~---------~~fv~k~~l~~~p~~g~~~~~~g~i~v~R~~~~~~~-------  242 (388)
                      +.+..+++|++|||+|++|+.++..++.         ..|++|++++..|++++++...|+|+|.|...-.+.       
T Consensus       125 kl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~  204 (367)
T d1iuqa_         125 KLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETK  204 (367)
T ss_dssp             HHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHH
T ss_pred             HhcCCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchh
Confidence            3456778999999999999988766542         489999999999999999999999999885432111       


Q ss_pred             -ccchHHHHHHHHHHHhCCCCCeEEEEeCceeeC----CCccc--cccccc----c----cCCCc--EEEEEEEcCCCCC
Q 016502          243 -KGVSGVVTERVREAHRDKSAPMMMLFPEGTTTN----GDYLL--PFKTGA----F----LARAP--VLPVILRYPYQRF  305 (388)
Q Consensus       243 -k~~~~~i~~~l~~~~~~~~~~~v~iFPEGT~sn----~~~ll--~Fk~Ga----f----~~~~p--IvPV~i~y~~~~~  305 (388)
                       ++-...+ +.+.+.++.+ +..|+|||||||++    .+.+.  +|++++    +    .+++|  |+||++.+.+...
T Consensus       205 ~~~~~~al-~~~~~lL~~G-g~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~p  282 (367)
T d1iuqa_         205 RKANTRSL-KEMALLLRGG-SQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMP  282 (367)
T ss_dssp             HHHHHHHH-HHHHHHHHHC-CCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSC
T ss_pred             hhhhhHHH-HHHHHHhhcC-CeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhcccccC
Confidence             1111122 2233333333 34788999999985    33333  577775    2    28999  9999999866533


Q ss_pred             CCccccccchhHHHHHhhccccEEEEEEcCccCCCCC--CCCCHHHHHHHHHHHHHH
Q 016502          306 SPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQ--EKDDPKLYAENVRRLMAS  360 (388)
Q Consensus       306 ~~~w~~~~~~~~~~~~l~~~~~~v~V~~lppi~~~~~--~~~~~~~~a~~vr~~ma~  360 (388)
                      ++..-    ...+.......+..+.|.+++|++.++.  ..++..+..+..++.|.+
T Consensus       283 P~~~v----~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~d  335 (367)
T d1iuqa_         283 PPSQV----EIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFD  335 (367)
T ss_dssp             CC--------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHH
T ss_pred             CCccc----ccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHHHH
Confidence            32210    0000001111245799999999976542  223554545555555544

PyMOL of d1iuqa_