Citrus Sinensis ID: 016539

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
cccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHcccccEEEEccccccccHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHccccccEEEcccEEEccccccccccccccccccEEEEEEEEcccccccccccccHHHHHHHHHcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccc
cHHHHHcccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccHHHccccHHHHHHHHEEEcccccccccccEEEEEcccccccEEEEEcccccHHEEEcccccccHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHEEEEEEcccccccHHHcccHHHHHHHHHHHHHHHcccccccccHHHcEEEEEHHHcccccc
meselkdlnskqlkstassddggsakddrpllkpdaADNIQELEKKFapyvrndvygtmgrgelplAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCtlfsapnrgedeqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKseneaknqskdedeakdqdeesgrpgaiisNHVSYLDILYhmsssfpsfvaKRSVAKLPLVGLISKCLgcvyvqreskssdfkgvsgVVTERVReahrdksapmmmlfpgtttngdyllpfktgaflarapvlpvilrypyqrfspawdsisgARHVFFLLCQFVNhievtslpvyhpsqqekddpkLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
meselkdlnskqlkstassddggsakddrpllkpdaadniqelekkfapyvrnDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVqekseneaknqskdedeakdqdeesgrpgaIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYvqreskssdfkgvsgvvtervreahrdksapmmmlfPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPvyhpsqqekddPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
MESELKDLNSKQLkstassddggsakddRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNqskdedeakdqdeesGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
*******************************************EKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAP********DYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDV*****************************AIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQR*****************************MMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYH***********YAENVRRLMASERNLILSDIGLAEKRIYHAALNGL****
*********************************************KFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRES************TERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHA**NG*****
***************************DRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEK***********************RPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
*************************************DNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLL***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVxxxxxxxxxxxxxxxxxxxxxDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q1LWG4 517 Lysophosphatidylcholine a no no 0.708 0.529 0.299 2e-29
Q8NF37 534 Lysophosphatidylcholine a yes no 0.726 0.526 0.305 3e-28
Q1HAQ0 534 Lysophosphatidylcholine a yes no 0.777 0.563 0.285 1e-27
Q3TFD2 534 Lysophosphatidylcholine a yes no 0.772 0.559 0.286 3e-27
Q0KHU5 533 1-acylglycerophosphocholi yes no 0.677 0.491 0.307 4e-27
Q28C60 522 Lysophospholipid acyltran no no 0.635 0.471 0.306 2e-26
Q8BYI6 544 Lysophosphatidylcholine a no no 0.702 0.5 0.278 2e-25
Q6DCK1 522 Lysophospholipid acyltran N/A no 0.633 0.469 0.303 2e-25
Q7L5N7 544 Lysophosphatidylcholine a no no 0.713 0.507 0.268 7e-24
P0C1Q3 544 Lysophosphatidylcholine a no no 0.589 0.419 0.288 4e-23
>sp|Q1LWG4|PCAT1_DANRE Lysophosphatidylcholine acyltransferase 1 OS=Danio rerio GN=lpcat1 PE=2 SV=1 Back     alignment and function desciption
 Score =  130 bits (327), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 146/314 (46%), Gaps = 40/314 (12%)

Query: 68  EKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSV 127
           +K  I +  VTL P+R++ A  ++++ +    V T+     R E+  E  +    W R +
Sbjct: 37  QKLKIAVMTVTLFPVRLLFAAFMMLLAWPFAFVATV----GRSENAVEPLS----WWRWL 88

Query: 128 VVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGA 187
           V +  + + R M F  GF+W+                 K +     EA         P  
Sbjct: 89  VDLALKAIMRAMWFSGGFHWV---------------RVKGRPALPSEA---------PIL 124

Query: 188 IISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSG 247
            ++ H SY D +  ++ +  S V K     +P+ G + K +  V+V R  + S  K    
Sbjct: 125 TMAPHSSYFDAI-PVTMTMASIVMKAESKDIPVWGTLIKFIRPVFVSRSDQDSRRK---- 179

Query: 248 VVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQ--RF 304
            V E  R A  +   P +M+FP GT TN   L+ FK GAF+   PV PV+LRYP +    
Sbjct: 180 TVEEIKRRASSNGEWPQIMIFPEGTCTNRSCLIAFKPGAFIPGVPVQPVVLRYPNELDTI 239

Query: 305 SPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLI 364
           S  W      + ++  LCQ  N +E+  LP Y PS++EK DP L+A NVRR+MA    L 
Sbjct: 240 SWTWQGPGAFKILWLTLCQLHNFVEIEYLPTYTPSEEEKKDPALFASNVRRIMAKALGLP 299

Query: 365 LSDIGLAEKRIYHA 378
           + D    + ++  A
Sbjct: 300 IIDYSFEDCQLAMA 313
Possesses both acyltransferase and acetyltransferase activities. Activity is calcium-independent. Mediates the conversion of 1-acyl-sn-glycero-3-phosphocholine (LPC) into phosphatidylcholine (PC).
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6EC: 7
>sp|Q8NF37|PCAT1_HUMAN Lysophosphatidylcholine acyltransferase 1 OS=Homo sapiens GN=LPCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q1HAQ0|PCAT1_RAT Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus GN=Lpcat1 PE=2 SV=2 Back     alignment and function description
>sp|Q3TFD2|PCAT1_MOUSE Lysophosphatidylcholine acyltransferase 1 OS=Mus musculus GN=Lpcat1 PE=1 SV=1 Back     alignment and function description
>sp|Q0KHU5|PCAT1_DROME 1-acylglycerophosphocholine O-acyltransferase 1 OS=Drosophila melanogaster GN=CG32699 PE=2 SV=1 Back     alignment and function description
>sp|Q28C60|LPCT4_XENTR Lysophospholipid acyltransferase LPCAT4 OS=Xenopus tropicalis GN=lpcat4 PE=2 SV=1 Back     alignment and function description
>sp|Q8BYI6|PCAT2_MOUSE Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus GN=Lpcat2 PE=1 SV=1 Back     alignment and function description
>sp|Q6DCK1|LPCT4_XENLA Lysophospholipid acyltransferase LPCAT4 OS=Xenopus laevis GN=lpcat4 PE=2 SV=2 Back     alignment and function description
>sp|Q7L5N7|PCAT2_HUMAN Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens GN=LPCAT2 PE=1 SV=1 Back     alignment and function description
>sp|P0C1Q3|PCAT2_RAT Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus GN=Lpcat2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
224137214402 predicted protein [Populus trichocarpa] 0.979 0.942 0.723 1e-166
356510241369 PREDICTED: 1-acylglycerophosphocholine O 0.940 0.986 0.738 1e-164
255538570382 acyltransferase, putative [Ricinus commu 0.963 0.976 0.730 1e-163
356518056370 PREDICTED: 1-acylglycerophosphocholine O 0.943 0.986 0.733 1e-162
224063595403 predicted protein [Populus trichocarpa] 0.971 0.933 0.717 1e-162
359492117374 PREDICTED: lysophosphatidylcholine acylt 0.948 0.981 0.760 1e-158
357511059382 1-acyl-sn-glycerol-3-phosphate acyltrans 0.950 0.963 0.731 1e-154
357511061390 1-acyl-sn-glycerol-3-phosphate acyltrans 0.940 0.933 0.731 1e-152
297839841396 hypothetical protein ARALYDRAFT_477149 [ 0.971 0.949 0.664 1e-149
449469993390 PREDICTED: lysophosphatidylcholine acylt 0.961 0.953 0.687 1e-148
>gi|224137214|ref|XP_002327070.1| predicted protein [Populus trichocarpa] gi|222835385|gb|EEE73820.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/398 (72%), Positives = 334/398 (83%), Gaps = 19/398 (4%)

Query: 1   MESELKDLNSKQLK----STASSDDGGSAKDDRPLLKPDA-------ADNIQELEKKFAP 49
           M++ELK +N    K      AS DDG ++KDDRPLLK D+        ++I+ELEKKFA 
Sbjct: 1   MDTELKSMNPDPPKPEQPDPASRDDGSNSKDDRPLLKSDSNRISSTTGESIEELEKKFAA 60

Query: 50  YVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNR 109
           YVRNDVYG MGRGELPL EK L+GIA+VTL+PIR VLA+ +LV+YY+ICRVCTLFSAPNR
Sbjct: 61  YVRNDVYGPMGRGELPLVEKVLLGIAVVTLVPIRFVLALIILVVYYIICRVCTLFSAPNR 120

Query: 110 GEDE-QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQ 168
            E+E QED+AHMGGWRR+V+V  GRFLSR++LFVLGFYWI+ ++R +++ ++      N+
Sbjct: 121 DEEEEQEDFAHMGGWRRAVIVWCGRFLSRMLLFVLGFYWISVSYRDIELPDQ------NK 174

Query: 169 SKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCL 228
           S  ++E KDQ EE  R GAIISNHVSYLDILYHMS+SFPSFVAKRSVAKLPLVGLISKCL
Sbjct: 175 SSSQNEGKDQSEEPERLGAIISNHVSYLDILYHMSASFPSFVAKRSVAKLPLVGLISKCL 234

Query: 229 GCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFL 287
           GCVYVQRESKSSDFKGVSG+VTERV+E+H + SAPMMMLFP GTTTNGD+LLPFKTGAFL
Sbjct: 235 GCVYVQRESKSSDFKGVSGIVTERVKESHENSSAPMMMLFPEGTTTNGDFLLPFKTGAFL 294

Query: 288 ARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPK 347
           A APV PVILRYPYQRFSPAWDSISGA HVF+L CQF+NH+E   LPVY+PSQ+EKDDPK
Sbjct: 295 ATAPVRPVILRYPYQRFSPAWDSISGALHVFYLFCQFINHMEAVWLPVYYPSQEEKDDPK 354

Query: 348 LYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLS 385
           LYA NVRRLMA E NL +SDIGLAEKRIYH ALNG +S
Sbjct: 355 LYASNVRRLMAREGNLKMSDIGLAEKRIYHTALNGNIS 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356510241|ref|XP_003523848.1| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|255538570|ref|XP_002510350.1| acyltransferase, putative [Ricinus communis] gi|223551051|gb|EEF52537.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356518056|ref|XP_003527700.1| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224063595|ref|XP_002301219.1| predicted protein [Populus trichocarpa] gi|222842945|gb|EEE80492.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492117|ref|XP_002283301.2| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Vitis vinifera] gi|302142453|emb|CBI19656.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357511059|ref|XP_003625818.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi|355500833|gb|AES82036.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357511061|ref|XP_003625819.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi|355500834|gb|AES82037.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297839841|ref|XP_002887802.1| hypothetical protein ARALYDRAFT_477149 [Arabidopsis lyrata subsp. lyrata] gi|297333643|gb|EFH64061.1| hypothetical protein ARALYDRAFT_477149 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449469993|ref|XP_004152703.1| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2025807398 AT1G80950 [Arabidopsis thalian 0.976 0.949 0.651 1.3e-130
UNIPROTKB|J9NSM6 485 LPCAT1 "Uncharacterized protei 0.449 0.358 0.395 3.4e-33
UNIPROTKB|F1PJ28 534 LPCAT1 "Uncharacterized protei 0.454 0.329 0.379 4.4e-32
UNIPROTKB|F1S029 534 LPCAT1 "Uncharacterized protei 0.449 0.325 0.395 2.3e-31
UNIPROTKB|F1NME3 525 LPCAT1 "Uncharacterized protei 0.447 0.329 0.373 4.4e-31
TAIR|locus:2043639 539 AT2G45670 [Arabidopsis thalian 0.483 0.346 0.341 1.3e-30
ZFIN|ZDB-GENE-030131-5777 508 lpcat4 "lysophosphatidylcholin 0.439 0.334 0.401 1.7e-30
UNIPROTKB|Q8NF37 534 LPCAT1 "Lysophosphatidylcholin 0.449 0.325 0.384 4.1e-30
ZFIN|ZDB-GENE-060503-915 517 lpcat1 "lysophosphatidylcholin 0.459 0.344 0.376 6.2e-30
RGD|1311599 534 Lpcat1 "lysophosphatidylcholin 0.449 0.325 0.379 3.1e-29
TAIR|locus:2025807 AT1G80950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1281 (456.0 bits), Expect = 1.3e-130, P = 1.3e-130
 Identities = 260/399 (65%), Positives = 301/399 (75%)

Query:     1 MESELKDLNSKQLXXXXXXXXXXXXXXXRPLLKP--DAADNIQELEKKFAPYVRNDVYGT 58
             MESELKDLNS                  RPLLK   D A  I+EL+KKFAPY R D+YGT
Sbjct:     1 MESELKDLNSNS--------NPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGT 52

Query:    59 MGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRG----EDE- 113
             MG G  P+ E   + +A+VTL+P+R +L+M++L++YYLICRV TLFSAP RG    EDE 
Sbjct:    53 MGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYYLICRVFTLFSAPYRGPEEEEDEG 112

Query:   114 ----QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNXX 169
                 QEDYAHM GW+R+V+V +GRFLSRV+LFV GFYWI E+    D  +   N      
Sbjct:   113 GVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD-SDMDSNPKTTST 171

Query:   170 XXXXXXXXXXXXXGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLG 229
                           RPGAI+SNHVSYLDILYHMS+SFPSFVAKRSV KLPLVGLISKCLG
Sbjct:   172 EINQKGEAATEEPERPGAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLG 231

Query:   230 CVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLA 288
             CVYVQRE+KS DFKGVSG V ERVREAH +KSAP +MLFP GTTTNGDYLL FKTGAFLA
Sbjct:   232 CVYVQREAKSPDFKGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLA 291

Query:   289 RAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKL 348
               PVLPVIL+YPY+RFS AWD+ISGARH+ FLLCQ VNH+EV  LPVY+PSQ+EKDDPKL
Sbjct:   292 GTPVLPVILKYPYERFSVAWDTISGARHILFLLCQVVNHLEVIRLPVYYPSQEEKDDPKL 351

Query:   349 YAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS 387
             YA NVR+LMA+E NLILS++GL++KRIYHA LNG LSQ+
Sbjct:   352 YASNVRKLMATEGNLILSELGLSDKRIYHATLNGNLSQT 390
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
UNIPROTKB|J9NSM6 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PJ28 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S029 LPCAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NME3 LPCAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2043639 AT2G45670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5777 lpcat4 "lysophosphatidylcholine acyltransferase 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NF37 LPCAT1 "Lysophosphatidylcholine acyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-915 lpcat1 "lysophosphatidylcholine acyltransferase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1311599 Lpcat1 "lysophosphatidylcholine acyltransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1.51LOW CONFIDENCE prediction!
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00400170
hypothetical protein (402 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.II.814.1
hypothetical protein (534 aa)
     •••0.901
gw1.XIV.942.1
hypothetical protein (382 aa)
     •••0.901
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.IX.3095.1
hypothetical protein (501 aa)
     •  0.899
gw1.I.9205.1
hypothetical protein (822 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
gw1.1077.3.1
annotation not avaliable (431 aa)
     •  0.899
grail3.0068004901
hypothetical protein (535 aa)
     •  0.899
grail3.0005029501
hypothetical protein (517 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
cd07991211 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt 7e-76
cd07989184 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr 7e-22
smart00563118 smart00563, PlsC, Phosphate acyltransferases 7e-21
pfam01553131 pfam01553, Acyltransferase, Acyltransferase 8e-18
TIGR00530130 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp 1e-16
COG0204255 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl 3e-15
PLN02833376 PLN02833, PLN02833, glycerol acyltransferase famil 8e-08
PLN02901214 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate 8e-07
cd06551187 cd06551, LPLAT, Lysophospholipid acyltransferases 4e-06
PRK15018245 PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate 5e-06
cd07992203 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy 5e-04
cd07990193 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt 0.001
>gnl|CDD|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information 
 Score =  233 bits (597), Expect = 7e-76
 Identities = 88/242 (36%), Positives = 123/242 (50%), Gaps = 36/242 (14%)

Query: 137 RVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYL 196
           RV+LF  GFY I                             + +    P  I++NH S++
Sbjct: 2   RVLLFAFGFYVIKV-------------------------HGKPDPPEAPRIIVANHTSFI 36

Query: 197 DILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREA 256
           D L   S  FPS VAK+ + KLP +G I + LGC++V R             V E ++E 
Sbjct: 37  DPLILFSDLFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKD-----RKKVVEEIKER 91

Query: 257 HRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGA- 314
             D + P +++FP GTTTNG  L+ FK GAF    PV PV +RYP  +F  A+ + SG  
Sbjct: 92  ATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPN-KFVDAFWNSSGYS 150

Query: 315 --RHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERNLILSDIGLAE 372
              ++F LL Q  N +EV  LPVY PS +E +DPK +A  VR +MA++  L  +D    +
Sbjct: 151 SLMYLFRLLTQPANVLEVEFLPVYTPS-EEGEDPKEFANRVRLIMANKLGLPATDWTGED 209

Query: 373 KR 374
           KR
Sbjct: 210 KR 211

Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211
>gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
>gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases Back     alignment and domain information
>gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase Back     alignment and domain information
>gnl|CDD|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases Back     alignment and domain information
>gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|215447 PLN02833, PLN02833, glycerol acyltransferase family protein Back     alignment and domain information
>gnl|CDD|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>gnl|CDD|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis Back     alignment and domain information
>gnl|CDD|184979 PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>gnl|CDD|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PLN02833376 glycerol acyltransferase family protein 100.0
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 100.0
KOG2848276 consensus 1-acyl-sn-glycerol-3-phosphate acyltrans 100.0
KOG4666412 consensus Predicted phosphate acyltransferase, con 99.97
PRK15018245 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr 99.97
PTZ00261355 acyltransferase; Provisional 99.94
PLN02177497 glycerol-3-phosphate acyltransferase 99.93
PLN02901214 1-acyl-sn-glycerol-3-phosphate acyltransferase 99.93
PLN02588525 glycerol-3-phosphate acyltransferase 99.93
PLN02499498 glycerol-3-phosphate acyltransferase 99.92
cd07988163 LPLAT_ABO13168-like Lysophospholipid Acyltransfera 99.9
cd07993205 LPLAT_DHAPAT-like Lysophospholipid Acyltransferase 99.89
cd07992203 LPLAT_AAK14816-like Lysophospholipid Acyltransfera 99.88
PLN02783315 diacylglycerol O-acyltransferase 99.88
PRK14014301 putative acyltransferase; Provisional 99.88
COG0204255 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas 99.88
cd07986210 LPLAT_ACT14924-like Lysophospholipid Acyltransfera 99.84
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 99.83
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.82
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.81
cd07987212 LPLAT_MGAT-like Lysophospholipid Acyltransferases 99.8
PRK03355 783 glycerol-3-phosphate acyltransferase; Validated 99.8
PLN02510374 probable 1-acyl-sn-glycerol-3-phosphate acyltransf 99.8
PLN02380376 1-acyl-sn-glycerol-3-phosphate acyltransferase 99.76
TIGR03703 799 plsB glycerol-3-phosphate O-acyltransferase. Membe 99.74
PRK04974 818 glycerol-3-phosphate acyltransferase; Validated 99.74
TIGR00530130 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra 99.73
cd06551187 LPLAT Lysophospholipid acyltransferases (LPLATs) o 99.7
cd07985235 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA 99.7
cd07983189 LPLAT_DUF374-like Lysophospholipid Acyltransferase 99.69
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 99.69
cd07990193 LPLAT_LCLAT1-like Lysophospholipid Acyltransferase 99.68
PF01553132 Acyltransferase: Acyltransferase; InterPro: IPR002 99.68
cd07989184 LPLAT_AGPAT-like Lysophospholipid Acyltransferases 99.68
KOG4666 412 consensus Predicted phosphate acyltransferase, con 99.67
smart00563118 PlsC Phosphate acyltransferases. Function in phosp 99.66
PRK11915 621 glycerol-3-phosphate acyltransferase; Reviewed 99.55
KOG2898354 consensus Predicted phosphate acyltransferase, con 99.41
KOG1505346 consensus Lysophosphatidic acid acyltransferase LP 99.38
cd07984192 LPLAT_LABLAT-like Lysophospholipid Acyltransferase 99.32
KOG2847286 consensus Phosphate acyltransferase [Lipid transpo 99.3
KOG3729 715 consensus Mitochondrial glycerol-3-phosphate acylt 98.9
COG2937 810 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid 98.81
KOG3730 685 consensus Acyl-CoA:dihydroxyactetone-phosphate acy 98.6
PRK08419298 lipid A biosynthesis lauroyl acyltransferase; Revi 98.19
COG2121214 Uncharacterized protein conserved in bacteria [Fun 97.5
PRK07920298 lipid A biosynthesis lauroyl acyltransferase; Prov 97.46
PLN02349426 glycerol-3-phosphate acyltransferase 97.12
PF03279295 Lip_A_acyltrans: Bacterial lipid A biosynthesis ac 96.86
PF03982297 DAGAT: Diacylglycerol acyltransferase ; InterPro: 95.53
PRK06553308 lipid A biosynthesis lauroyl acyltransferase; Prov 95.26
COG1560308 HtrB Lauroyl/myristoyl acyltransferase [Cell envel 94.94
PRK08733306 lipid A biosynthesis lauroyl acyltransferase; Prov 94.01
PRK05646310 lipid A biosynthesis lauroyl acyltransferase; Prov 93.64
PRK06628290 lipid A biosynthesis lauroyl acyltransferase; Prov 93.61
PRK06946293 lipid A biosynthesis lauroyl acyltransferase; Prov 93.41
TIGR02207303 lipid_A_htrB lipid A biosynthesis lauroyl (or palm 92.99
PRK06860309 lipid A biosynthesis lauroyl acyltransferase; Prov 92.6
PRK08025305 lipid A biosynthesis palmitoleoyl acyltransferase; 92.48
PRK05906 454 lipid A biosynthesis lauroyl acyltransferase; Prov 92.34
PRK08905289 lipid A biosynthesis lauroyl acyltransferase; Vali 92.27
PRK08706289 lipid A biosynthesis lauroyl acyltransferase; Prov 91.36
TIGR02208305 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) 91.33
COG3176292 Putative hemolysin [General function prediction on 90.06
PRK08943314 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac 89.96
PRK15174656 Vi polysaccharide export protein VexE; Provisional 89.47
PRK05645295 lipid A biosynthesis lauroyl acyltransferase; Prov 89.13
KOG0831334 consensus Acyl-CoA:diacylglycerol acyltransferase 88.88
PRK08734305 lipid A biosynthesis lauroyl acyltransferase; Prov 88.57
>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information 
Probab=100.00  E-value=2.3e-35  Score=289.18  Aligned_cols=276  Identities=18%  Similarity=0.246  Sum_probs=203.0

Q ss_pred             cHHHHhhccCCceecCCCCCCCCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 016539           39 NIQELEKKFAPYVRNDVYGTMGRGELPLAE----KFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQ  114 (387)
Q Consensus        39 ~~~~~~~~~~~f~r~~~~g~~~~~~~~~~~----~~~~~~~~~~l~plRl~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~  114 (387)
                      .+||+.++|++-.-..  +++     ..++    .+-.++...+|+|+|+++++++++.+.++..++.++. ..      
T Consensus        60 ~dd~~~~~f~~~~~~~--~n~-----~~~l~~~w~~g~~~ry~~L~p~R~~~~~~~~~~~~~~~~~v~~~~-~~------  125 (376)
T PLN02833         60 VDDSFTRCFKSNPPEP--WNW-----NIYLFPLWCVGVVIRYGILFPVRVLLLAIGWIIFLSAFIPVHFLL-KG------  125 (376)
T ss_pred             hhhhhhhccCCCCCCC--cch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cc------
Confidence            4568999999766533  122     2222    1222345677999999999887755544433332321 10      


Q ss_pred             ccccccccchhHHHHHHHHHHHHHHHHhcceEEEEEeeeecchhhhhhhhhhccCcccccccccCCCCCCCeEEEecCCc
Q 016539          115 EDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVS  194 (387)
Q Consensus       115 ~~~~~~~~~rr~l~~~~~~~~~r~~l~~~G~~~i~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~IiVaNH~S  194 (387)
                            ...++.+.+.+.+++++.++...+.. +++.|..                         ..++++.|+||||+|
T Consensus       126 ------~~~r~~~~r~~v~~~~~~~~~~~~~~-i~v~G~e-------------------------~~~~~~~IiVaNH~S  173 (376)
T PLN02833        126 ------HKLRKKIERKLVELICSAFVASWTGV-IKYHGPR-------------------------PSRRPKQVFVANHTS  173 (376)
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHHhEEE-EEEECCc-------------------------CCCCCCEEEEECCCC
Confidence                  12344455555556665444433332 5665531                         124568999999999


Q ss_pred             ccchhhhccccCceEEEecccccccHHH-HHHHhcCceEEeCCCCCccccchHHHHHHHHHHHHhCCCCCeEEEEe-Ccc
Q 016539          195 YLDILYHMSSSFPSFVAKRSVAKLPLVG-LISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTT  272 (387)
Q Consensus       195 ~lD~l~l~~~~~~~fvak~~l~~~P~~g-~~~~~~g~i~v~R~~~~~~~~~~~~~i~~~l~~~~~~~~g~~l~IFP-GT~  272 (387)
                      ++|++++.+..+..+++|++....++++ ++++..|+++|+|++..+ .+    .+.+.+++..++++|.+|+||| |||
T Consensus       174 ~lDi~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I~VdR~~~~~-~~----~~~~~l~~~l~~~~G~~llIFPEGTr  248 (376)
T PLN02833        174 MIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFNRTEAKD-RE----VVAKKLRDHVQDPDRNPLLIFPEGTC  248 (376)
T ss_pred             hHHHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcEEecCCCHHH-HH----HHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            9999999988888899988887776654 899999999999976532 22    3455566555555688999999 999


Q ss_pred             cCCCCccccccccccCCCCEEEEEEEcCCCCCCCccc--cccchhHHHHHhhcCccEEEEEEcCccCCCCCCCCCHHHHH
Q 016539          273 TNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWD--SISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYA  350 (387)
Q Consensus       273 sn~~~ll~Fk~Gaf~~~~pV~PV~I~y~~~~~~~~w~--~~~~~~~l~~~l~~~~~~v~V~~lppi~~~~~~~~~~~~la  350 (387)
                      ++++.+++||+|+|..++||+||+|+|+.......|.  ..++..+++++|+++...++|+++||++++  +.+++++++
T Consensus       249 s~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~--~~e~~~efA  326 (376)
T PLN02833        249 VNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTMHLLRLMTSWAVVCDVWYLEPQTLR--PGETPIEFA  326 (376)
T ss_pred             cCCCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHHhHHHHhCCCceEEEEEECCCcCCC--CCCCHHHHH
Confidence            9999999999999999999999999999876666785  467889999999999999999999999864  356899999


Q ss_pred             HHHHHHHHHhhCccccc
Q 016539          351 ENVRRLMASERNLILSD  367 (387)
Q Consensus       351 ~~vr~~ma~~l~~~~~~  367 (387)
                      +++++.|++.+|++...
T Consensus       327 ~rv~~~Ia~~lgi~~~~  343 (376)
T PLN02833        327 ERVRDMIAKRAGLKKVP  343 (376)
T ss_pred             HHHHHHHHHhcCCCCCC
Confidence            99999999999987554

>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] Back     alignment and domain information
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>PTZ00261 acyltransferase; Provisional Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02588 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02499 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 Back     alignment and domain information
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like Back     alignment and domain information
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>PLN02783 diacylglycerol O-acyltransferase Back     alignment and domain information
>PRK14014 putative acyltransferase; Provisional Back     alignment and domain information
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
>PRK03355 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase Back     alignment and domain information
>PRK04974 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases Back     alignment and domain information
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis Back     alignment and domain information
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT Back     alignment and domain information
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like Back     alignment and domain information
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] Back     alignment and domain information
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] Back     alignment and domain information
>smart00563 PlsC Phosphate acyltransferases Back     alignment and domain information
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed Back     alignment and domain information
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] Back     alignment and domain information
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] Back     alignment and domain information
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like Back     alignment and domain information
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] Back     alignment and domain information
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] Back     alignment and domain information
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed Back     alignment and domain information
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PLN02349 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria Back     alignment and domain information
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] Back     alignment and domain information
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Back     alignment and domain information
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed Back     alignment and domain information
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated Back     alignment and domain information
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase Back     alignment and domain information
>COG3176 Putative hemolysin [General function prediction only] Back     alignment and domain information
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] Back     alignment and domain information
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.1 bits (129), Expect = 5e-08
 Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 62/238 (26%)

Query: 148 ITETFRILDVQEKSENEAKNQSKDEDEAKDQD-------EESGRPGAIISNHVSYLDILY 200
           ++ T R+       + E   +  +E    +          E  +P  +   ++   D LY
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 201 HMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDK 260
           + +  F     K +V++L     + + L       E + +    + G             
Sbjct: 121 NDNQVFA----KYNVSRLQPYLKLRQAL------LELRPAKNVLIDG------------- 157

Query: 261 SAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVL---PVILRYPYQRFSPAWDSISGARHV 317
              +     G+   G      KT  ++A   V     V  +  ++ F   W ++      
Sbjct: 158 ---V----LGS---G------KT--WVA-LDVCLSYKVQCKMDFKIF---WLNLKNCNSP 195

Query: 318 FFLLCQFVN---HIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASERN----LILSDI 368
             +L         I+         S   K         +RRL+ S+      L+L ++
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 99.77
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Back     alignment and structure
Probab=99.77  E-value=1.4e-20  Score=180.30  Aligned_cols=204  Identities=17%  Similarity=0.174  Sum_probs=128.9

Q ss_pred             HHHHHHHHHHHHHhcceEEEEEeeeecchhhhhhhhhhccCcccccccccCCCCCCCeEEEecCCcccchhhhcccc---
Q 016539          129 VVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSS---  205 (387)
Q Consensus       129 ~~~~~~~~r~~l~~~G~~~i~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~IiVaNH~S~lD~l~l~~~~---  205 (387)
                      +.+++.|.|.++...|..   |.|....        .+++   |+      .+.++++|++|||+|.+|++++....   
T Consensus        95 y~~~~~~ir~li~~~~s~---V~G~e~~--------~~~~---E~------l~~~~~vIfisNHQS~~D~~vi~~~l~~~  154 (367)
T 1iuq_A           95 YIFGQNYIRPLIDFGNSF---VGNLSLF--------KDIE---EK------LQQGHNVVLISNHQTEADPAIISLLLEKT  154 (367)
T ss_dssp             HHHHHHHHGGGBCGGGCE---EECHHHH--------HHHH---HH------HHTTCEEEEEECCCCTTHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhcCCE---eecchhh--------hhHH---hh------ccCCCcEEEEECCccchhHHHHHHHHhhc
Confidence            445677778777777765   5553221        0111   22      24568999999999999999988776   


Q ss_pred             ------CceEEEecccccccHHHHHH--HhcCceEEeCC----------CCCccccchHHHHHHHHHHHHhCCCCCeEEE
Q 016539          206 ------FPSFVAKRSVAKLPLVGLIS--KCLGCVYVQRE----------SKSSDFKGVSGVVTERVREAHRDKSAPMMML  267 (387)
Q Consensus       206 ------~~~fvak~~l~~~P~~g~~~--~~~g~i~v~R~----------~~~~~~~~~~~~i~~~l~~~~~~~~g~~l~I  267 (387)
                            ...||||+++.+.|++..+.  +.++||+..+.          +.+.+.+++. .+.+.+++     .|..++|
T Consensus       155 ~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~-~~~~~Lk~-----GG~sI~I  228 (367)
T 1iuq_A          155 NPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLK-EMALLLRG-----GSQLIWI  228 (367)
T ss_dssp             CHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHH-HHHHHHHH-----CCCEEEE
T ss_pred             ccccccceEEEeehhhhcCccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHH-HHHHHHHc-----CCeEEEE
Confidence                  46999999999777764321  34567776332          2211222111 22333332     2568999


Q ss_pred             Ee-CcccCC----CC--ccccccccc----c----CCCC--EEEEEEEcCCCCCCCccccccchhHHHHHhhcCccEEEE
Q 016539          268 FP-GTTTNG----DY--LLPFKTGAF----L----ARAP--VLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEV  330 (387)
Q Consensus       268 FP-GT~sn~----~~--ll~Fk~Gaf----~----~~~p--V~PV~I~y~~~~~~~~w~~~~~~~~l~~~l~~~~~~v~V  330 (387)
                      || |||+++    +.  ..+||.|+|    .    +++|  |+||+|. ++..+++.-..   -..+..-....++.|.|
T Consensus       229 FPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp~~v---e~~~g~~r~i~~~~V~v  304 (367)
T 1iuq_A          229 APSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPPPSQV---EIEIGEKRVIAFNGAGL  304 (367)
T ss_dssp             CTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC-------------CCCCCBCCEE
T ss_pred             eCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCCcccc---cccccccceeecccEEE
Confidence            99 999996    33  455999999    3    9999  9999999 66655431000   00000000113468999


Q ss_pred             EEcCccCCCCCC------CCCHHHHHHHHHHHHHHhhC
Q 016539          331 TSLPVYHPSQQE------KDDPKLYAENVRRLMASERN  362 (387)
Q Consensus       331 ~~lppi~~~~~~------~~~~~~la~~vr~~ma~~l~  362 (387)
                      .+++||+++++.      +++.+.+++.|++.|++.+.
T Consensus       305 ~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~  342 (367)
T 1iuq_A          305 SVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYN  342 (367)
T ss_dssp             EECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCccchhhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            999999866532      22345688999999988763

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d1iuqa_367 c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf 9e-05
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 27/142 (19%)

Query: 181 ESGRPGAIISNHVSYLD------ILYHMSSSFP---SFVAKRSVAKLPLVGLISKCLGCV 231
           + G    +ISNH +  D      +L   +        FVA   V   PL    S     +
Sbjct: 127 QQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLI 186

Query: 232 YVQRESKSSDFKGVSGVVT----ERVREAHRDKSAP--MMMLFPGTTTNGD-------YL 278
            V  +    D   ++          ++E          ++ + P    +         Y 
Sbjct: 187 CVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP 246

Query: 279 LPFKTG-----AFLARAPVLPV 295
            PF          L +   +P 
Sbjct: 247 APFDASSVDNMRRLIQHSDVPG 268

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1iuqa_367 Glycerol-3-phosphate (1)-acyltransferase {Cushaw s 99.58
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

Probab=99.58  E-value=9.8e-16  Score=146.22  Aligned_cols=169  Identities=17%  Similarity=0.127  Sum_probs=107.1

Q ss_pred             CCCCCeEEEecCCcccchhhhcccc---------CceEEEecccccccHHHHHHHhcCceEEeCCCCCccc--------c
Q 016539          181 ESGRPGAIISNHVSYLDILYHMSSS---------FPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDF--------K  243 (387)
Q Consensus       181 ~~~~~~IiVaNH~S~lD~l~l~~~~---------~~~fvak~~l~~~P~~g~~~~~~g~i~v~R~~~~~~~--------~  243 (387)
                      +..+++|++|||+|++|++++..+.         ...|++|++++..|++++++...|+|+|+|...-.+.        +
T Consensus       127 ~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~  206 (367)
T d1iuqa_         127 QQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRK  206 (367)
T ss_dssp             HTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHH
T ss_pred             cCCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchhhh
Confidence            5567899999999999998876542         2489999999999999999999999999986432111        1


Q ss_pred             c---hHHHHHHHHHHHHhCCCCCeEEEEe-CcccC----CCCc--ccccccc----c----cCCCC--EEEEEEEcCCCC
Q 016539          244 G---VSGVVTERVREAHRDKSAPMMMLFP-GTTTN----GDYL--LPFKTGA----F----LARAP--VLPVILRYPYQR  303 (387)
Q Consensus       244 ~---~~~~i~~~l~~~~~~~~g~~l~IFP-GT~sn----~~~l--l~Fk~Ga----f----~~~~p--V~PV~I~y~~~~  303 (387)
                      .   ..+...+.+++    + +..++||| |||++    ++.+  .+|++++    +    .+++|  |+||+|.++...
T Consensus       207 ~~~~al~~~~~lL~~----G-g~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~  281 (367)
T d1iuqa_         207 ANTRSLKEMALLLRG----G-SQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIM  281 (367)
T ss_dssp             HHHHHHHHHHHHHHH----C-CCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGS
T ss_pred             hhhHHHHHHHHHhhc----C-CeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhccccc
Confidence            1   11122333332    2 34678999 99985    3333  3577775    2    28999  999999987765


Q ss_pred             CCCccccccchhHHHHHhhcCccEEEEEEcCccCCCCC--CCCCHHHHHHHHHHHHH
Q 016539          304 FSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQ--EKDDPKLYAENVRRLMA  358 (387)
Q Consensus       304 ~~~~w~~~~~~~~l~~~l~~~~~~v~V~~lppi~~~~~--~~~~~~~la~~vr~~ma  358 (387)
                      .++..-    ...+...-...++.|.|.+++||+.++.  ..++..+..+..++.|.
T Consensus       282 pP~~~v----~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~  334 (367)
T d1iuqa_         282 PPPSQV----EIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALF  334 (367)
T ss_dssp             CCC--------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHH
T ss_pred             CCCccc----ccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHHH
Confidence            443210    0001100112345799999999985442  12344444444444443