Citrus Sinensis ID: 016564

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLLT
cccEEEEccEEccccccccccHHHHHHHcccccccccccccHHHcccEEEEcccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccccEEEccccEEEEEEccccccccEEEEEccccccccccccEEEEEccEEEEEEEEEEccEEEEEEEEccEEccccccccccccccccccccccHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccccEEEccccHHccccHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHHHccccccEEEcccccc
ccEEEEEccccccccccccccHHHHHHHHcccccHHHHHcccccccccEEEEcccEEEEccccccccEEEEccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccHHHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEccccccEEEEcccEEEEEEccccccccEEEEccccHHHHcccccEEEEccccEEEEEEEEcccEEEEEEcccEEcccccEEEccccccccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHcccccccEEEEEEcccHHHHcHHHHHHHccEEEEEHHHHHHHcccccHHHHHHHHHHHHHHccccccEEEHHHHcc
MAQVVATRSiqssfmcpasgsaqeraseklkpssfastvlSREEKKRVTLVRKSTKISAqkatrvepevvpvspedvpkrdgefqhfgglqqlgdtsvsmwtkptvrrktkivctigpstnTREMIWKLAEAGMNVARlnmshgdhashQKVIDLVKEYNAQSKDNVIAIMLdtkgpevrsgdlpqpitltsgqefTFTIqrgvgsaecvsvnyddfvndveVGDMLLVDGGMMSLLVKsktedsvkcevvdggelksrrhlnvrgksatlpsitekdwddikfgvdnkvdFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIesadsipnlhsiitasdgamvargdlgaelpieevpllqvvfisdiramprmsssiKAFYLLT
maqvvatrsiqssfmcpasgsaqeraseklkpssfastvlsreekkrvtlvrkstkisaqkatrvepevvpvspedvPKRDGEFQHfgglqqlgdtsvsmwtkptvrrktkivctigpstntrEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLvksktedsvkcevvdggelksrrhlnvrgksatlpsitekdwddiKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISdiramprmsssikafyllt
MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRvepevvpvspedvpKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLLT
*************************************************************************************HFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTK***********PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGG*******L*V****ATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM**SIKAFYL**
***************************************************************************************GGL*QLG*****MWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLLT
**********QSSF*************************************************************DVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLLT
**Q*VA***I*SSFMCPAS***Q*****KLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFY*LT
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q9FLW9 579 Plastidial pyruvate kinas yes no 0.963 0.644 0.773 1e-170
Q40546 562 Pyruvate kinase isozyme G N/A no 0.692 0.476 0.835 1e-133
Q93Z53 571 Plastidial pyruvate kinas no no 0.689 0.467 0.820 1e-127
P55964 418 Pyruvate kinase isozyme G N/A no 0.555 0.514 0.810 3e-97
Q9LIK0 596 Plastidial pyruvate kinas no no 0.682 0.442 0.485 3e-61
Q6GG09 585 Pyruvate kinase OS=Staphy yes no 0.658 0.435 0.459 3e-61
Q7A0N4 585 Pyruvate kinase OS=Staphy yes no 0.658 0.435 0.459 4e-61
Q6G8M9 585 Pyruvate kinase OS=Staphy yes no 0.658 0.435 0.459 4e-61
Q7A559 585 Pyruvate kinase OS=Staphy yes no 0.658 0.435 0.459 4e-61
Q99TG5 585 Pyruvate kinase OS=Staphy yes no 0.658 0.435 0.459 4e-61
>sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana GN=PKP2 PE=1 SV=1 Back     alignment and function desciption
 Score =  599 bits (1544), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 290/375 (77%), Positives = 323/375 (86%), Gaps = 2/375 (0%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKI--S 58
           MAQVVATRSIQ S + P  GS   R+ + LKP+SFA  VL  E K+   +  +S ++  +
Sbjct: 1   MAQVVATRSIQGSMLSPNGGSVSTRSEKLLKPASFAVKVLGNEAKRSGRVSVRSRRVVDT 60

Query: 59  AQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGP 118
             ++ RVE EV+PVSPEDVP R+ + +    +QQ GDTSV MW+KPTVRRKTKIVCT+GP
Sbjct: 61  TVRSARVETEVIPVSPEDVPNREEQLERLLEMQQFGDTSVGMWSKPTVRRKTKIVCTVGP 120

Query: 119 STNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178
           STNTREMIWKLAEAGMNVAR+NMSHGDHASH+KVIDLVKEYNAQ+KDN IAIMLDTKGPE
Sbjct: 121 STNTREMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQTKDNTIAIMLDTKGPE 180

Query: 179 VRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV 238
           VRSGDLPQPI L  GQEFTFTI+RGV +  CVSVNYDDFVNDVE GDMLLVDGGMMS +V
Sbjct: 181 VRSGDLPQPIMLDPGQEFTFTIERGVSTPSCVSVNYDDFVNDVEAGDMLLVDGGMMSFMV 240

Query: 239 KSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFV 298
           KSKT+DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVSFV
Sbjct: 241 KSKTKDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFV 300

Query: 299 KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 358
           KDAQVVHELK YL++ GADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE
Sbjct: 301 KDAQVVHELKKYLQNSGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 360

Query: 359 VPLLQVVFISDIRAM 373
           VP+LQ   I+  R+M
Sbjct: 361 VPILQEEIINLCRSM 375
Required for plastidial pyruvate kinase activity. Involved in seed oil accumulation, embryo development and seed storage compounds mobilization upon germination.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q93Z53|PKP3_ARATH Plastidial pyruvate kinase 3, chloroplastic OS=Arabidopsis thaliana GN=PKP3 PE=1 SV=1 Back     alignment and function description
>sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis PE=2 SV=1 Back     alignment and function description
>sp|Q9LIK0|PKP1_ARATH Plastidial pyruvate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=PKP1 PE=1 SV=1 Back     alignment and function description
>sp|Q6GG09|KPYK_STAAR Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|Q7A0N4|KPYK_STAAW Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1 Back     alignment and function description
>sp|Q6G8M9|KPYK_STAAS Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1 Back     alignment and function description
>sp|Q7A559|KPYK_STAAN Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|Q99TG5|KPYK_STAAM Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
255545104 580 pyruvate kinase, putative [Ricinus commu 0.956 0.637 0.836 0.0
225462665 577 PREDICTED: pyruvate kinase isozyme G, ch 0.961 0.644 0.828 1e-179
302143717 576 unnamed protein product [Vitis vinifera] 0.958 0.644 0.831 1e-178
147860666 580 hypothetical protein VITISV_007675 [Viti 0.958 0.639 0.820 1e-176
356576030 575 PREDICTED: pyruvate kinase isozyme G, ch 0.958 0.645 0.812 1e-175
356559692 577 PREDICTED: pyruvate kinase isozyme G, ch 0.958 0.642 0.813 1e-175
356535816 578 PREDICTED: pyruvate kinase isozyme G, ch 0.958 0.641 0.809 1e-174
356530788 577 PREDICTED: pyruvate kinase isozyme G, ch 0.958 0.642 0.810 1e-174
297792631 579 hypothetical protein ARALYDRAFT_495356 [ 0.963 0.644 0.776 1e-170
15237303 579 pyruvate kinase [Arabidopsis thaliana] g 0.963 0.644 0.773 1e-169
>gi|255545104|ref|XP_002513613.1| pyruvate kinase, putative [Ricinus communis] gi|223547521|gb|EEF49016.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/379 (83%), Positives = 346/379 (91%), Gaps = 9/379 (2%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKR-----VTLVRKST 55
           MAQVVATRSI +S +CP SGS+ +  ++KLKPSSFAS +LSRE+ KR     +T+ R++T
Sbjct: 1   MAQVVATRSIHTSLLCPTSGSSLQDRADKLKPSSFASKLLSREDNKRNKNSSLTISRRNT 60

Query: 56  KI-SAQKATRVEPEVVPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVC 114
           +I +A ++TRVE EV+PVSPEDVP+R+ +  H   LQQLGDTSVSMW+KP VRRKTKIVC
Sbjct: 61  QIQAANRSTRVETEVIPVSPEDVPQREEQVLH---LQQLGDTSVSMWSKPVVRRKTKIVC 117

Query: 115 TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 174
           TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT
Sbjct: 118 TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDT 177

Query: 175 KGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMM 234
           KGPEVRSGDLPQPI L+ GQEFTFTI+RGVG+A+CVSVNYDDFVNDVEVGDMLLVDGGMM
Sbjct: 178 KGPEVRSGDLPQPIMLSPGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMM 237

Query: 235 SLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294
           SLLVKSKTEDSV+CEV+DGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA
Sbjct: 238 SLLVKSKTEDSVRCEVIDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 297

Query: 295 VSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL 354
           VSFVKDAQVVHELKNYL+ CGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL
Sbjct: 298 VSFVKDAQVVHELKNYLQGCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAEL 357

Query: 355 PIEEVPLLQVVFISDIRAM 373
           PIEEVPLLQ   I   R+M
Sbjct: 358 PIEEVPLLQEEIIRLCRSM 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225462665|ref|XP_002264485.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143717|emb|CBI22578.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860666|emb|CAN81451.1| hypothetical protein VITISV_007675 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576030|ref|XP_003556138.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356559692|ref|XP_003548131.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356535816|ref|XP_003536439.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356530788|ref|XP_003533962.1| PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297792631|ref|XP_002864200.1| hypothetical protein ARALYDRAFT_495356 [Arabidopsis lyrata subsp. lyrata] gi|297310035|gb|EFH40459.1| hypothetical protein ARALYDRAFT_495356 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15237303|ref|NP_200104.1| pyruvate kinase [Arabidopsis thaliana] gi|75309198|sp|Q9FLW9.1|PKP2_ARATH RecName: Full=Plastidial pyruvate kinase 2; Short=PKp2; AltName: Full=Plastidial pyruvate kinase 1; Short=PKP1; AltName: Full=Pyruvate kinase III; AltName: Full=Pyruvate kinase isozyme B1, chloroplastic; Short=PKP-BETA1; Short=Plastidic pyruvate kinase beta subunit 1; Flags: Precursor gi|10177106|dbj|BAB10440.1| pyruvate kinase [Arabidopsis thaliana] gi|21536743|gb|AAM61075.1| pyruvate kinase [Arabidopsis thaliana] gi|332008895|gb|AED96278.1| pyruvate kinase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2176912 579 PKP-BETA1 "plastidic pyruvate 0.963 0.644 0.744 1.2e-143
TAIR|locus:2033760 571 PKp3 "plastidial pyruvate kina 0.689 0.467 0.820 2.2e-112
TAIR|locus:2084583 596 PKP-ALPHA [Arabidopsis thalian 0.684 0.444 0.483 7.5e-57
UNIPROTKB|P0AD61 470 pykF "pyruvate kinase I monome 0.679 0.559 0.450 1.8e-55
UNIPROTKB|Q9KUN0 470 VC_0485 "Pyruvate kinase" [Vib 0.666 0.548 0.441 3e-53
TIGR_CMR|VC_0485 470 VC_0485 "pyruvate kinase I" [V 0.666 0.548 0.441 3e-53
TIGR_CMR|BA_4843 585 BA_4843 "pyruvate kinase" [Bac 0.658 0.435 0.441 6.3e-53
FB|FBgn0003178 533 PyK "Pyruvate kinase" [Drosoph 0.674 0.489 0.413 1.2e-49
TIGR_CMR|CHY_1144 583 CHY_1144 "pyruvate kinase" [Ca 0.658 0.437 0.416 5.2e-49
TAIR|locus:2078966 510 AT3G55650 [Arabidopsis thalian 0.697 0.529 0.405 8.5e-49
TAIR|locus:2176912 PKP-BETA1 "plastidic pyruvate kinase beta subunit 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
 Identities = 279/375 (74%), Positives = 310/375 (82%)

Query:     1 MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKK--RVTLVRKSTKIS 58
             MAQVVATRSIQ S + P  GS   R+ + LKP+SFA  VL  E K+  RV++  +    +
Sbjct:     1 MAQVVATRSIQGSMLSPNGGSVSTRSEKLLKPASFAVKVLGNEAKRSGRVSVRSRRVVDT 60

Query:    59 AQKATRXXXXXXXXXXXXXXKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGP 118
               ++ R               R+ + +    +QQ GDTSV MW+KPTVRRKTKIVCT+GP
Sbjct:    61 TVRSARVETEVIPVSPEDVPNREEQLERLLEMQQFGDTSVGMWSKPTVRRKTKIVCTVGP 120

Query:   119 STNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178
             STNTREMIWKLAEAGMNVAR+NMSHGDHASH+KVIDLVKEYNAQ+KDN IAIMLDTKGPE
Sbjct:   121 STNTREMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQTKDNTIAIMLDTKGPE 180

Query:   179 VRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV 238
             VRSGDLPQPI L  GQEFTFTI+RGV +  CVSVNYDDFVNDVE GDMLLVDGGMMS +V
Sbjct:   181 VRSGDLPQPIMLDPGQEFTFTIERGVSTPSCVSVNYDDFVNDVEAGDMLLVDGGMMSFMV 240

Query:   239 KSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFV 298
             KSKT+DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVSFV
Sbjct:   241 KSKTKDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFV 300

Query:   299 KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 358
             KDAQVVHELK YL++ GADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE
Sbjct:   301 KDAQVVHELKKYLQNSGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEE 360

Query:   359 VPLLQVVFISDIRAM 373
             VP+LQ   I+  R+M
Sbjct:   361 VPILQEEIINLCRSM 375
GO:0000287 "magnesium ion binding" evidence=IEA;IDA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS;IDA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0030955 "potassium ion binding" evidence=IEA;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0010431 "seed maturation" evidence=IMP
GO:0006633 "fatty acid biosynthetic process" evidence=IMP
GO:0048316 "seed development" evidence=IMP
GO:0006629 "lipid metabolic process" evidence=IGI
GO:0005829 "cytosol" evidence=RCA
TAIR|locus:2033760 PKp3 "plastidial pyruvate kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084583 PKP-ALPHA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P0AD61 pykF "pyruvate kinase I monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUN0 VC_0485 "Pyruvate kinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0485 VC_0485 "pyruvate kinase I" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4843 BA_4843 "pyruvate kinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
FB|FBgn0003178 PyK "Pyruvate kinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1144 CHY_1144 "pyruvate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TAIR|locus:2078966 AT3G55650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLW9PKP2_ARATH2, ., 7, ., 1, ., 4, 00.77330.96380.6442yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.914
3rd Layer2.7.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__1172__AT5G52920.1
annotation not avaliable (579 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.7__2582__AT4G17260.1
annotation not avaliable (353 aa)
     •• 0.581
PGIC
Glucose-6-phosphate isomerase, cytosolic (560 aa)
     •• 0.550
fgenesh2_kg.2__2254__AT1G79550.2
annotation not avaliable (401 aa)
      • 0.455
scaffold_702990.1
annotation not avaliable (955 aa)
     •• 0.454
fgenesh2_kg.4__1530__AT2G35040.1
annotation not avaliable (598 aa)
      • 0.428

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
PLN02623 581 PLN02623, PLN02623, pyruvate kinase 0.0
PRK05826 465 PRK05826, PRK05826, pyruvate kinase; Provisional 1e-108
TIGR01064 473 TIGR01064, pyruv_kin, pyruvate kinase 1e-102
COG0469 477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-100
cd00288 480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 8e-90
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 8e-88
PLN02762 509 PLN02762, PLN02762, pyruvate kinase complex alpha 1e-86
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 8e-83
PRK09206 470 PRK09206, PRK09206, pyruvate kinase; Provisional 8e-83
PRK06247 476 PRK06247, PRK06247, pyruvate kinase; Provisional 1e-68
PTZ00066 513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 9e-65
PLN02461 511 PLN02461, PLN02461, Probable pyruvate kinase 7e-64
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 9e-61
PTZ00300 454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 3e-44
PLN02765 526 PLN02765, PLN02765, pyruvate kinase 9e-39
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 5e-22
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 2e-15
PRK14725 608 PRK14725, PRK14725, pyruvate kinase; Provisional 3e-07
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information 
 Score =  631 bits (1628), Expect = 0.0
 Identities = 291/377 (77%), Positives = 315/377 (83%), Gaps = 7/377 (1%)

Query: 1   MAQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQ 60
            AQVVATRSI SS +  +SGS        L P SFAS VL  E + R  +  +   ++A 
Sbjct: 2   AAQVVATRSIDSSILSSSSGSVSLD---LLSPLSFASKVLGSEARARRRVAVRRRAVTAA 58

Query: 61  --KATRVEPEVVPVSPED--VPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTI 116
             ++   E EV+PVSPED      +   +    +QQLG+T+V MW+KP+VRRKTKIVCTI
Sbjct: 59  SLRSKSQETEVIPVSPEDGGANFVEDNEEVLLEIQQLGETAVGMWSKPSVRRKTKIVCTI 118

Query: 117 GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176
           GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG
Sbjct: 119 GPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 178

Query: 177 PEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSL 236
           PEVRSGDLPQPI L  GQEFTFTI+RGV + +CVSVNYDDFVNDVEVGDMLLVDGGMMSL
Sbjct: 179 PEVRSGDLPQPIMLEEGQEFTFTIKRGVSTEDCVSVNYDDFVNDVEVGDMLLVDGGMMSL 238

Query: 237 LVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVS 296
            VKSKT DSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDW+DIKFGV+NKVDFYAVS
Sbjct: 239 AVKSKTSDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVS 298

Query: 297 FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 356
           FVKDAQVVHELK+YLKSC ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI
Sbjct: 299 FVKDAQVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 358

Query: 357 EEVPLLQVVFISDIRAM 373
           EEVPLLQ   I   R+M
Sbjct: 359 EEVPLLQEEIIRRCRSM 375

Length = 581
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PLN02623 581 pyruvate kinase 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PLN02762 509 pyruvate kinase complex alpha subunit 100.0
PTZ00066 513 pyruvate kinase; Provisional 100.0
PRK06739352 pyruvate kinase; Validated 100.0
COG0469 477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PLN02461 511 Probable pyruvate kinase 100.0
PRK09206 470 pyruvate kinase; Provisional 100.0
PLN02765 526 pyruvate kinase 100.0
PRK06247 476 pyruvate kinase; Provisional 100.0
cd00288 480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK05826 465 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
TIGR01064 473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
KOG2323 501 consensus Pyruvate kinase [Carbohydrate transport 100.0
PTZ00300 454 pyruvate kinase; Provisional 100.0
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.66
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.65
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.59
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.59
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.58
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.52
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.5
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 99.12
PRK06464795 phosphoenolpyruvate synthase; Validated 99.09
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.09
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.04
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 98.95
TIGR01344 511 malate_syn_A malate synthase A. This model represe 98.93
cd00727 511 malate_synt_A Malate synthase A (MSA), present in 98.92
PRK09255 531 malate synthase; Validated 98.81
cd00480 511 malate_synt Malate synthase catalyzes the Claisen 98.8
PLN02626 551 malate synthase 98.49
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 97.95
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.08
TIGR02751 506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 96.85
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.65
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 96.55
PRK13655 494 phosphoenolpyruvate carboxylase; Provisional 96.48
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 96.08
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 96.08
PRK09279879 pyruvate phosphate dikinase; Provisional 95.87
COG2352 910 Ppc Phosphoenolpyruvate carboxylase [Energy produc 94.18
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 93.17
PF14010 491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 92.27
COG3605756 PtsP Signal transduction protein containing GAF an 91.18
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 89.09
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 88.53
PRK00694 606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 85.16
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 84.82
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 84.59
PF04551 359 GcpE: GcpE protein; InterPro: IPR004588 This prote 84.57
PRK08649 368 inosine 5-monophosphate dehydrogenase; Validated 83.05
cd00381 325 IMPDH IMPDH: The catalytic domain of the inosine m 82.4
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 80.61
PLN02925 733 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 80.1
>PLN02623 pyruvate kinase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-87  Score=700.44  Aligned_cols=378  Identities=78%  Similarity=1.111  Sum_probs=344.9

Q ss_pred             chhhhhhhccccccccCCCchhhhhhhhcCCCccccccchhhhhccchhhccccccccc--cccCCCCceeeCCCCCccc
Q 016564            2 AQVVATRSIQSSFMCPASGSAQERASEKLKPSSFASTVLSREEKKRVTLVRKSTKISAQ--KATRVEPEVVPVSPEDVPK   79 (387)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   79 (387)
                      +|+..++|++++++++.+|+...   ++..|.+++.+.+....+.+.....+.....++  ..++++.+++|+|||+...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (581)
T PLN02623          3 AQVVATRSIDSSILSSSSGSVSL---DLLSPLSFASKVLGSEARARRRVAVRRRAVTAASLRSKSQETEVIPVSPEDGGA   79 (581)
T ss_pred             cccccccccccccccCCCCcccc---cccccccccccccCchhhhhccccccccchhhhhhhccccCcceeecccccccc
Confidence            56677789999999888877543   477888888887765544433333333333222  2678899999999999664


Q ss_pred             --cccccccccCccccccccccccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHH
Q 016564           80 --RDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVK  157 (387)
Q Consensus        80 --~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR  157 (387)
                        ++++.+.+.++++++.++.+||+.|..+|||||||||||+|+++|+|++|+++|||+||||||||++++|+++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rkTKIV~TiGPas~s~e~l~~li~aGmnv~RlNfSHg~~e~h~~~i~~vr  159 (581)
T PLN02623         80 NFVEDNEEVLLEIQQLGETAVGMWSKPSVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVK  159 (581)
T ss_pred             ccccccccccchhhHHHhhhhhhcCCCCCCCCCeEEEEeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHH
Confidence              777888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeeEEEEeCCCCeeeecCCCCCeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEE
Q 016564          158 EYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLL  237 (387)
Q Consensus       158 ~~~~~~~~~~i~I~lDL~GPkIRtG~l~~~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~  237 (387)
                      +++++..+++++|++||+|||||+|.+++++.|++||+|+||.+...|+++.++++|++|++++++||.||+|||+|.|+
T Consensus       160 ~~~~~~~~~~iaIl~Dl~GPkIRig~~~~~i~l~~G~~v~lt~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~  239 (581)
T PLN02623        160 EYNAQSKDNVIAIMLDTKGPEVRSGDLPQPIMLEEGQEFTFTIKRGVSTEDCVSVNYDDFVNDVEVGDMLLVDGGMMSLA  239 (581)
T ss_pred             HHHHHcCCCceEEEecCCCCceecccCCCCEEecCCCEEEEecCccCCCCCEEeechHHHHhhCCCCCEEEEeCCeEEEE
Confidence            99988766899999999999999999988999999999999988777888899999999999999999999999999999


Q ss_pred             EEEEeCCeEEEEEEECcEecCCcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 016564          238 VKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD  317 (387)
Q Consensus       238 V~~v~~d~v~c~V~~gG~L~s~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~  317 (387)
                      |++++++.++|+|++||.|+++||||+||+.+++|+|||+|++||+|++++++|||++|||++++||+++++|+.+.|.+
T Consensus       240 V~~~~~~~v~~~V~~gG~L~s~KgvNlpg~~~~lp~lTekD~~di~f~~~~~vD~ialSFVr~a~DV~~~r~~l~~~~~~  319 (581)
T PLN02623        240 VKSKTSDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENKVDFYAVSFVKDAQVVHELKDYLKSCNAD  319 (581)
T ss_pred             EEEEECCEEEEEEEeceEecCCCCCCCCCCcCCCCCCCHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccce
Q 016564          318 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFY  384 (387)
Q Consensus       318 i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~  384 (387)
                      +.|||||||++|++||+||++.+|||||||||||+++|+++++.+|++|+++|+++|||+  +.+++
T Consensus       320 ~~iiakIEt~eaVeNldeIl~g~DgImIgrgDLgvelg~~~v~~~qk~Ii~~~~~~gKpv--ivaTQ  384 (581)
T PLN02623        320 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRRCRSMGKPV--IVATN  384 (581)
T ss_pred             ceEEEEECCHHHHHhHHHHHHhCCEEEECcchhhhhcCcHHHHHHHHHHHHHHHHhCCCE--EEECc
Confidence            999999999999999999999999999999999999999999999999999999999999  44554

>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information
>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 2e-62
1e0u_A 470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 2e-59
1pky_A 470 Pyruvate Kinase From E. Coli In The T-State Length 4e-59
1e0t_A 470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 5e-59
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 5e-57
3ma8_A 534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 7e-49
4drs_A 526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 9e-49
1pkm_A 530 The Refined Three-Dimensional Structure Of Cat Musc 1e-48
1pkn_A 530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 3e-48
3srf_C 551 Human M1 Pyruvate Kinase Length = 551 7e-48
1t5a_A 567 Human Pyruvate Kinase M2 Length = 567 8e-48
4b2d_D 548 Human Pkm2 With L-serine And Fbp Bound Length = 548 8e-48
3gqy_A 550 Activator-Bound Structure Of Human Pyruvate Kinase 9e-48
3u2z_A 533 Activator-Bound Structure Of Human Pyruvate Kinase 9e-48
3srd_A 551 Human M2 Pyruvate Kinase In Complex With Fructose 1 9e-48
3bjt_A 530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 1e-47
1zjh_A 548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 1e-47
3bjf_A 518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 1e-47
3g2g_A 533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 1e-47
4g1n_A 518 Pkm2 In Complex With An Activator Length = 518 1e-47
2g50_A 530 The Location Of The Allosteric Amino Acid Binding S 1e-46
3n25_A 531 The Structure Of Muscle Pyruvate Kinase In Complex 1e-46
1aqf_A 530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 1e-46
1f3w_A 530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 1e-46
1f3x_A 530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 2e-46
3qv9_A 499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 2e-46
4ima_A 543 The Structure Of C436m-hlpyk In Complex With Citrat 2e-45
4ip7_A 543 Structure Of The S12d Variant Of Human Liver Pyruva 3e-45
2vgb_A 528 Human Erythrocyte Pyruvate Kinase Length = 528 3e-45
2vgf_A 528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 3e-45
2vgg_A 528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 3e-45
3pp7_A 498 Crystal Structure Of Leishmania Mexicana Pyruvate K 3e-45
1pkl_A 499 The Structure Of Leishmania Pyruvate Kinase Length 3e-45
2vgi_A 528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 4e-45
3e0v_A 539 Crystal Structure Of Pyruvate Kinase From Leishmani 4e-45
3eoe_A 511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 5e-43
1a3w_A 500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 8e-43
3khd_A 520 Crystal Structure Of Pff1300w. Length = 520 7e-41
3qtg_A 461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 3e-20
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure 
Iteration: 1

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/259 (45%), Positives = 173/259 (66%), Gaps = 4/259 (1%)
Query: 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNV 167
           RKTKIVCTIGP++ + EMI KL  AGMNVARLN SHG H  H+  ID +++  A+  D +
Sbjct: 23  RKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKV-AKRLDKI 81
Query: 168 IAIMLDTKGPEVRSGDLPQPIT-LTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDM 226
           +AI+LDTKGPE+R+ ++   I  L  G E   ++    G+ E  SV Y++ +NDV+VG  
Sbjct: 82  VAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSY 141
Query: 227 LLVDGGMMSLLVKS--KTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKF 284
           +L+D G++ L VK     +  VKC++++ GELK+++ +N+ G   +LP ITEKD +DI+F
Sbjct: 142 ILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRF 201
Query: 285 GVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM 344
           G+   VDF A SFV+    V E++  L+   A+I V  KIE+ + I N+  I+  SDG M
Sbjct: 202 GIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLM 261
Query: 345 VARGDLGAELPIEEVPLLQ 363
           VARGD+G E+P E+VP++Q
Sbjct: 262 VARGDMGVEIPPEKVPMVQ 280
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3gg8_A 511 Pyruvate kinase; malaria, genomics, proteomics, gl 1e-116
3khd_A 520 Pyruvate kinase; malaria, structural genomics, str 1e-114
1e0t_A 470 Pyruvate kinase, PK; phosphotransferase, glycolysi 1e-114
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 1e-112
1a3w_A 500 Pyruvate kinase; allosteric regulation, tranferase 1e-111
3gr4_A 550 Pyruvate kinase isozymes M1/M2; activator, acetyla 1e-111
3hqn_D 499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 1e-111
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 1e-109
3ma8_A 534 Pyruvate kinase; parasitology, pyruvate kiase, gly 1e-108
3qtg_A 461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 1e-106
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
 Score =  346 bits (890), Expect = e-116
 Identities = 94/266 (35%), Positives = 145/266 (54%), Gaps = 4/266 (1%)

Query: 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA 161
            +     +T+IVCT+GP+    + + K+ +AGMNV RLN SHGDH +H + +  ++E   
Sbjct: 30  EEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMK 89

Query: 162 QSKDNVIAIMLDTKGPEVRSGDLP--QPITLTSGQEFTFTIQRGV-GSAECVSVNYDDFV 218
           Q  +  +AI+LDTKGPE+R+G L   +PITL  G          + G    ++ +Y    
Sbjct: 90  QRPEARLAILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALP 149

Query: 219 NDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKD 278
             V+ G+ +L+  G +S+ V     D V  +  +   +  R+++N+      LP I EKD
Sbjct: 150 QSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKD 209

Query: 279 WDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSII 337
             DI  FG+    +F A SFV+ A  V  ++  L   G  I +I KIE+ + + N   I+
Sbjct: 210 KHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEIL 269

Query: 338 TASDGAMVARGDLGAELPIEEVPLLQ 363
             +DG M+ARGDLG E+P E+V L Q
Sbjct: 270 AEADGIMIARGDLGMEIPPEKVFLAQ 295
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
3gr4_A 550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3khd_A 520 Pyruvate kinase; malaria, structural genomics, str 100.0
3hqn_D 499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
4drs_A 526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3gg8_A 511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
3qtg_A 461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1e0t_A 470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
1a3w_A 500 Pyruvate kinase; allosteric regulation, tranferase 100.0
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.67
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.66
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.66
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.64
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.64
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.6
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.43
3qqw_A 332 Putative citrate lyase; TIM beta/alpha-barrel, str 99.4
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 99.36
3r4i_A 339 Citrate lyase; TIM beta/alpha-barrel, structural g 99.33
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.27
3oyz_A 433 Malate synthase; TIM barrel, transferase; HET: ACO 99.2
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.03
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 98.92
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 98.91
3cuz_A 532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 98.41
3cux_A 528 Malate synthase; TIM barrel, glyoxylate bypass, tr 98.38
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.34
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.23
1p7t_A 731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 98.19
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.0
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 96.3
3odm_A 560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 95.81
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 95.35
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 95.2
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 89.71
4g9p_A 406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 84.8
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
Probab=100.00  E-value=4.3e-82  Score=657.04  Aligned_cols=296  Identities=38%  Similarity=0.607  Sum_probs=282.5

Q ss_pred             ccccccccCccccccccccccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHH
Q 016564           81 DGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYN  160 (387)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~  160 (387)
                      +.+++|++.|.        +.++|..+|||||||||||+|+++|+|++|+++||||||||||||++++|.++|+++|+++
T Consensus        43 ~~~l~~~~~l~--------~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~  114 (550)
T 3gr4_A           43 DTFLEHMCRLD--------IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTAT  114 (550)
T ss_dssp             SSHHHHHHTCC--------TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHhhccC--------CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHH
Confidence            44799999887        7788889999999999999999999999999999999999999999999999999999998


Q ss_pred             Hhc-----CCCeeEEEEeCCCCeeeecCCCC----CeEecCCCEEEEEecCC---CCCccEEEeccCCcccccCcCCEEE
Q 016564          161 AQS-----KDNVIAIMLDTKGPEVRSGDLPQ----PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDMLL  228 (387)
Q Consensus       161 ~~~-----~~~~i~I~lDL~GPkIRtG~l~~----~i~Lk~G~~v~lt~~~~---~g~~~~i~v~~~~l~~~v~~Gd~Il  228 (387)
                      ++.     .++||+|++||+|||||||.+.+    +++|++||+|+|+++..   .|+.+.++++|++|++++++||+||
T Consensus       115 ~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Il  194 (550)
T 3gr4_A          115 ESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIY  194 (550)
T ss_dssp             HTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEE
T ss_pred             HhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEE
Confidence            872     35789999999999999999963    79999999999998753   5788899999999999999999999


Q ss_pred             EeCCeEEEEEEEEeCCeEEEEEEECcEecCCcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHH
Q 016564          229 VDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELK  308 (387)
Q Consensus       229 iDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~  308 (387)
                      +|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+||++|.+||+|++++|+|||++|||++++||++++
T Consensus       195 idDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r  274 (550)
T 3gr4_A          195 VDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVR  274 (550)
T ss_dssp             ETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHH
T ss_pred             EeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564          309 NYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL  386 (387)
Q Consensus       309 ~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~  386 (387)
                      ++|.+.|.++.|||||||++|++||+||++++|||||||||||+|+|+++++.+||+|+++|+++|||+  |.|++.|
T Consensus       275 ~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpV--i~ATQML  350 (550)
T 3gr4_A          275 KVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPV--ICATQML  350 (550)
T ss_dssp             HHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCE--EEESSTT
T ss_pred             HHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCE--EEEehhh
Confidence            999998889999999999999999999999999999999999999999999999999999999999999  8888765
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 2e-25
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 7e-13
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 2e-24
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 4e-17
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 4e-24
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 3e-17
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 6e-24
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 3e-14
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 1e-20
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 1e-19
d1e0ta198 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric 6e-19
d2vgba1102 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( 3e-18
d1pkla199 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman 2e-15
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  101 bits (252), Expect = 2e-25
 Identities = 32/83 (38%), Positives = 46/83 (55%)

Query: 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNA 161
              +  R+T I+ TIGP TN  E +  L +AG+N+ R+N SHG +  H+ VID  ++   
Sbjct: 13  VAGSDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEE 72

Query: 162 QSKDNVIAIMLDTKGPEVRSGDL 184
                 +AI LDTKGP +   D 
Sbjct: 73  LYPGRPLAIALDTKGPALSEKDK 95
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.89
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.89
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.89
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.88
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.87
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.66
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.6
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 99.28
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 99.17
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.23
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 96.61
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 96.09
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 94.41
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 94.32
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.3e-54  Score=411.34  Aligned_cols=188  Identities=39%  Similarity=0.598  Sum_probs=177.2

Q ss_pred             CCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeee
Q 016564          102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRS  181 (387)
Q Consensus       102 ~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRt  181 (387)
                      ..+..||||||||||||+|+++++|++|+++|||+||||||||++++|+++|+++|++++...+++++|++||+||    
T Consensus        13 ~~~~~mRrTKIIaTiGPas~~~e~l~~li~aG~dv~RlN~SHg~~~~h~~~i~~iR~~~e~~~G~~v~i~~dl~~p----   88 (265)
T d1a3xa2          13 VAGSDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGP----   88 (265)
T ss_dssp             SCCSSCCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSCCHHHHHHHHHHHHHHHHHCCCSCCBCEEECCCC----
T ss_pred             CCCcCccCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHhhhccCCceeeeccccch----
Confidence            4455589999999999999999999999999999999999999999999999999999876667888888888775    


Q ss_pred             cCCCCCeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecCCcc
Q 016564          182 GDLPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRH  261 (387)
Q Consensus       182 G~l~~~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~Kg  261 (387)
                                                                                                      
T Consensus        89 --------------------------------------------------------------------------------   88 (265)
T d1a3xa2          89 --------------------------------------------------------------------------------   88 (265)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcC
Q 016564          262 LNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASD  341 (387)
Q Consensus       262 Vn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sD  341 (387)
                                 .+|++|.+||+|++++++|||++|||++++||..+++++.+.+.+++|||||||++|++||+||++++|
T Consensus        89 -----------~ltekD~~di~~a~~~~vD~ialSFVrs~~Di~~~r~~l~~~~~~~~IiaKIE~~~al~NldeIi~~sD  157 (265)
T d1a3xa2          89 -----------ALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTD  157 (265)
T ss_dssp             -----------SSCHHHHHHHHHHHHTTCCEECCTTCCSHHHHHHHHHHHCGGGTTSCCEEEECSHHHHTTHHHHHHHCS
T ss_pred             -----------hcccchHHHHHHhhhcccceEeeccCCCHHHHHHHHHHHHHhcCCCeEEeeccchHHHhChHHHHhhcc
Confidence                       457999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             eEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564          342 GAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL  386 (387)
Q Consensus       342 GImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~  386 (387)
                      ||||+|||||+|+|++++|.+||+|+..|+++|||+  |.|++.|
T Consensus       158 gimIaRGDLgvei~~e~vp~~Qk~Ii~~~~~~gkpv--ivATq~L  200 (265)
T d1a3xa2         158 GVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPV--ICATQML  200 (265)
T ss_dssp             EEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE--EEESSSS
T ss_pred             eeEEEccchhhhccHHHHHHHHHHHHHHHHHcCCcE--Eehhhhh
Confidence            999999999999999999999999999999999999  9988765
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure