Citrus Sinensis ID: 016600

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380------
MQDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
ccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEEEEEEEEccccccccccccccEEEEccccccccccccccccEEEEcccccccHHHHHHHccccccEEEEEccccccEEEEEccccccccEEEEccccccccccEEEEEEEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccEEEccccccccccEEEEEEccccEEEEccccEEEEEcccccEEEEEEEcccccEEEEcHHHEEEEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcc
ccccccccccccccccccccccccHHcccccccccccccccEEEEEEccccccccEEEEEEEEEcccccccccccccccEEEEcccccccccccccccccEEccccccccHHHHHHHccccccEEEEEEccccccEEEEcccccccccccccccccccccEEEEEEEEEEEccEEEcccccEEEEEcccEEEEccHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccEEEEEEccccEEEcccccEEEEEccccEEEEEEEEcccccEEEEEEEEEccEEEEEEccccEEEEcccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcc
mqdrdlneyspsasstskhlscshrlcdlgtscqnpkqpcpytmdyytentsssgllVEDILHLISGGDNALKNSVQASVIIGCgmkqsggyldgvapdgliglglgeisvPSLLAKAGlirnsfsmcfdkddsgriffgdqgpatqqSTSFLASNGKYITYIIGVETccigssclkqtSFKAIvdsgssftflpkEVYETIAAEFDRQvndtitsfegypwkccyksssqrlpklpsvklmfpqnnsfvvnnpVFVIYGTQVVTGFClaiqpvdgdigtigqnfmtgyrvvfdrenlklgwshsncqdlndgtkspltpgpgtpsnplpanqeqsspgghavgpavagrapskpstastqlissrssslkvlPFLLLLRLLVSAS
mqdrdlneyspsasstskhlsCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTastqlissrssslkvlpfLLLLRLLVSAS
MQDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMfpqnnsfvvnnpvfvIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSpgghavgpavagrapSKPstastqlissrssslkvlpfllllrllvsas
***********************HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQG*****STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN***************************************************************LKVLPFLLLLRLLV***
**DRDLNEYSPSASSTSKHLSCSH***************CPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND*****EGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQ********************************************************SRSSSLKVLPFLLLLRLLVSAS
*********************CSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPS****************************************SSSLKVLPFLLLLRLLVSAS
*****LNE*S*S*SSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLND***************************************************SSRSSSLKVLPFLLLLRLLVSAS
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
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MQDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query386 2.2.26 [Sep-21-2011]
Q9LX20528 Aspartic proteinase-like yes no 0.891 0.651 0.591 1e-119
Q9S9K4475 Aspartic proteinase-like no no 0.756 0.614 0.272 3e-15
P32329569 Aspartic proteinase 3 OS= yes no 0.492 0.333 0.273 2e-07
Q0IU52410 Aspartic proteinase Asp1 no no 0.722 0.680 0.238 6e-07
Q6XBF8437 Aspartic proteinase CDR1 no no 0.696 0.615 0.237 7e-07
Q766C2438 Aspartic proteinase nepen N/A no 0.717 0.632 0.228 2e-06
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.660 0.621 0.236 2e-06
Q9LZL3453 Aspartic proteinase PCS1 no no 0.751 0.640 0.231 3e-06
Q9Y5Z0518 Beta-secretase 2 OS=Homo yes no 0.722 0.538 0.226 3e-05
Q9JL18514 Beta-secretase 2 OS=Mus m yes no 0.663 0.498 0.219 4e-05
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function desciption
 Score =  428 bits (1101), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/355 (59%), Positives = 268/355 (75%), Gaps = 11/355 (3%)

Query: 1   MQDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVED 60
           +  +DLNEY+PS+SSTSK   CSH+LCD  + C++PK+ CPYT++Y + NTSSSGLLVED
Sbjct: 144 LATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKEQCPYTVNYLSGNTSSSGLLVED 203

Query: 61  ILHLISGGDNALKN---SVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAK 117
           ILHL    +N L N   SV+A V+IGCG KQSG YLDGVAPDGL+GLG  EISVPS L+K
Sbjct: 204 ILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLSK 263

Query: 118 AGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLA-SNGKYITYIIGVETCCIGSSCL 176
           AGL+RNSFS+CFD++DSGRI+FGD GP+ QQST FL   N KY  YI+GVE CCIG+SCL
Sbjct: 264 AGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSCL 323

Query: 177 KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKL 236
           KQTSF   +DSG SFT+LP+E+Y  +A E DR +N T  +FEG  W+ CY+SS++  PK+
Sbjct: 324 KQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATSKNFEGVSWEYCYESSAE--PKV 381

Query: 237 PSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGD-IGTIGQNFMTGYRVVFDR 295
           P++KL F  NN+FV++ P+FV   +Q +  FCL I P   + IG+IGQN+M GYR+VFDR
Sbjct: 382 PAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPSGQEGIGSIGQNYMRGYRMVFDR 441

Query: 296 ENLKLGWSHSNCQDLNDGTKSP-LTPGPGTPSNPLPANQEQSSPGGHAVGPAVAG 349
           EN+KLGWS S CQ+  D  + P  +PG  +  NPLP +++QS  GGHAV PA+AG
Sbjct: 442 ENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPTDEQQSR-GGHAVSPAIAG 493

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|P32329|YPS1_YEAST Aspartic proteinase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPS1 PE=1 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y5Z0|BACE2_HUMAN Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=1 Back     alignment and function description
>sp|Q9JL18|BACE2_MOUSE Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query386
255576176 542 Aspartic proteinase nepenthesin-1 precur 0.943 0.671 0.771 1e-167
296082464 530 unnamed protein product [Vitis vinifera] 0.943 0.686 0.728 1e-156
225438629 511 PREDICTED: aspartic proteinase-like prot 0.943 0.712 0.728 1e-156
224083757 492 predicted protein [Populus trichocarpa] 0.906 0.711 0.754 1e-156
449451627 532 PREDICTED: aspartic proteinase-like prot 0.971 0.704 0.681 1e-148
356567798 520 PREDICTED: aspartic proteinase-like prot 0.930 0.690 0.695 1e-141
356538031 521 PREDICTED: aspartic proteinase-like prot 0.932 0.690 0.694 1e-141
357463449 529 Aspartic proteinase-like protein [Medica 0.927 0.676 0.680 1e-133
359492825 531 PREDICTED: aspartic proteinase-like prot 0.922 0.670 0.617 1e-124
302141912 521 unnamed protein product [Vitis vinifera] 0.922 0.683 0.617 1e-124
>gi|255576176|ref|XP_002528982.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531572|gb|EEF33401.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 281/364 (77%), Positives = 316/364 (86%)

Query: 3   DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDIL 62
           DRDLNEYSPS SSTSKHLSCSH+LC+LG +C +PKQPCPY+MDYYTENTSSSGLLVEDIL
Sbjct: 158 DRDLNEYSPSHSSTSKHLSCSHQLCELGPNCNSPKQPCPYSMDYYTENTSSSGLLVEDIL 217

Query: 63  HLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIR 122
           HL S GDNAL  SV+A V+IGCGMKQSGGYLDGVAPDGL+GLGL EISVPS LAKAGLIR
Sbjct: 218 HLASNGDNALSYSVRAPVVIGCGMKQSGGYLDGVAPDGLMGLGLAEISVPSFLAKAGLIR 277

Query: 123 NSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 182
           NSFSMCFD+DDSGRIFFGDQGP TQQST FL  +G Y TY++GVE  C+GSSCLKQTSF+
Sbjct: 278 NSFSMCFDEDDSGRIFFGDQGPTTQQSTPFLTLDGNYTTYVVGVEGFCVGSSCLKQTSFR 337

Query: 183 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLM 242
           A+VD+G+SFTFLP  VYE I  EFDRQVN TI+SF GYPWK CYKSSS  L K+PSVKL+
Sbjct: 338 ALVDTGTSFTFLPNGVYERITEEFDRQVNATISSFNGYPWKYCYKSSSNHLTKVPSVKLI 397

Query: 243 FPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGW 302
           FP NNSFV++NPVF+IYG Q +TGFCLAIQP +GDIGTIGQNFM GYRVVFDREN+KLGW
Sbjct: 398 FPLNNSFVIHNPVFMIYGIQGITGFCLAIQPTEGDIGTIGQNFMAGYRVVFDRENMKLGW 457

Query: 303 SHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQL 362
           SHS+C+D ++  + PLT   GT  NPLP N++QSSPGGHAV PAVAGRAPSKPS A+ QL
Sbjct: 458 SHSSCEDRSNDKRMPLTSPNGTLVNPLPTNEQQSSPGGHAVSPAVAGRAPSKPSAAAVQL 517

Query: 363 ISSR 366
           + SR
Sbjct: 518 LPSR 521

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296082464|emb|CBI21469.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438629|ref|XP_002281243.1| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224083757|ref|XP_002307112.1| predicted protein [Populus trichocarpa] gi|222856561|gb|EEE94108.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449451627|ref|XP_004143563.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356567798|ref|XP_003552102.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356538031|ref|XP_003537508.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357463449|ref|XP_003602006.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355491054|gb|AES72257.1| Aspartic proteinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|359492825|ref|XP_002284255.2| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141912|emb|CBI19115.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query386
TAIR|locus:2184138528 AT5G10080 [Arabidopsis thalian 0.852 0.623 0.569 4.9e-101
TAIR|locus:2827921513 AT2G17760 [Arabidopsis thalian 0.769 0.578 0.437 3.6e-57
TAIR|locus:2125324524 AT4G35880 [Arabidopsis thalian 0.782 0.576 0.390 3.8e-53
TAIR|locus:2080903529 AT3G51330 [Arabidopsis thalian 0.839 0.612 0.373 1.7e-50
TAIR|locus:2080913528 AT3G51350 [Arabidopsis thalian 0.836 0.611 0.343 1.9e-44
TAIR|locus:2080908530 AT3G51340 [Arabidopsis thalian 0.829 0.603 0.352 1e-43
TAIR|locus:2080973488 AT3G51360 [Arabidopsis thalian 0.826 0.653 0.340 9.3e-43
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.759 0.600 0.284 1.8e-23
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.821 0.501 0.273 2.4e-22
TAIR|locus:2017799484 AT1G79720 [Arabidopsis thalian 0.738 0.588 0.283 9.7e-18
TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 193/339 (56%), Positives = 245/339 (72%)

Query:     4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILH 63
             +DLNEY+PS+SSTSK   CSH+LCD  + C++PK+ CPYT++Y + NTSSSGLLVEDILH
Sbjct:   147 KDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKEQCPYTVNYLSGNTSSSGLLVEDILH 206

Query:    64 LISGGDNALKN---SVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGL 120
             L    +N L N   SV+A V+IGCG KQSG YLDGVAPDGL+GLG  EISVPS L+KAGL
Sbjct:   207 LTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGL 266

Query:   121 IRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLA-SNGKYITYIIGVETCCIGSSCLKQT 179
             +RNSFS+CFD++DSGRI+FGD GP+ QQST FL   N KY  YI+GVE CCIG+SCLKQT
Sbjct:   267 MRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQT 326

Query:   180 SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSV 239
             SF   +DSG SFT+LP+E+Y  +A E DR +N T  +FEG  W+ CY+SS++  PK+P++
Sbjct:   327 SFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATSKNFEGVSWEYCYESSAE--PKVPAI 384

Query:   240 KLMXXXXXXXXXXXXXXXIYGTQVVTGFCLAIQPVDGD-IGTIGQNFMTGYRVVFDRENL 298
             KL                   +Q +  FCL I P   + IG+IGQN+M GYR+VFDREN+
Sbjct:   385 KLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPSGQEGIGSIGQNYMRGYRMVFDRENM 444

Query:   299 KLGWSHSNCQDLNDGTKSP-LTPGPGTPSNPLPANQEQS 336
             KLGWS S CQ+  D  + P  +PG  +  NPLP +++QS
Sbjct:   445 KLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPTDEQQS 481
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017799 AT1G79720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LX20ASPL1_ARATH3, ., 4, ., 2, 3, ., -0.59150.89110.6515yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query386
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-26
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 4e-22
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-22
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-17
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 2e-16
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 4e-12
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 3e-10
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 8e-10
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-05
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-04
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 0.003
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  105 bits (265), Expect = 2e-26
 Identities = 68/288 (23%), Positives = 99/288 (34%), Gaps = 69/288 (23%)

Query: 38  QPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVA 97
           Q C Y    Y + +S+SG+L  +      G  +        +V  GCG    GG   G  
Sbjct: 29  QCCSYEY-SYGDGSSTSGVLATETFTF--GDSSVSV----PNVAFGCGTDNEGGSFGG-- 79

Query: 98  PDGLIGLGLGEISVPSLLAKAGLIRNSFSMCF----DKDDSGRIFFGD---QGPATQQST 150
            DG++GLG G +S+ S L   G   N FS C     D   S  +  GD    G +    T
Sbjct: 80  ADGILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTGGSSPLILGDAADLGGSGVVYT 136

Query: 151 SFLASNGKYITYIIGVETCCIGSSCLKQTSFKA----------IVDSGSSFTFLPKEVYE 200
             + +      Y + +E   +G   L                 I+DSG++ T+LP   Y 
Sbjct: 137 PLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIIDSGTTLTYLPDPAYP 196

Query: 201 TIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 260
            +   FD                                 L  P  N FV          
Sbjct: 197 DLTLHFD-----------------------------GGADLELPPENYFVDVGE------ 221

Query: 261 TQVVTGFCLAIQPVDGDIGTIGQNF-MTGYRVVFDRENLKLGWSHSNC 307
                  CLAI        +I  N     + V +D EN +LG++ ++C
Sbjct: 222 ----GVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 386
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.92
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.83
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.01
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.91
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.42
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 94.27
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 90.47
PF1365090 Asp_protease_2: Aspartyl protease 84.74
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 82.12
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 81.79
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 81.24
cd0609489 RP_Saci_like RP_Saci_like, retropepsin family. Ret 80.26
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.8e-47  Score=380.04  Aligned_cols=290  Identities=24%  Similarity=0.426  Sum_probs=236.0

Q ss_pred             CCCCCCCCCCCCCCccccCCCcCCCCCC---CCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccE
Q 016600            4 RDLNEYSPSASSTSKHLSCSHRLCDLGT---SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASV   80 (386)
Q Consensus         4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~---~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~   80 (386)
                      +..+.|||++|+||+.++|+++.|....   .|... +.|.|.+.|+|| +.++|.+++|+|+|++....   .....++
T Consensus       122 ~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~-~~c~y~i~Ygdg-s~~~G~l~~Dtltlg~~~~~---~~~v~~~  196 (431)
T PLN03146        122 QVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDE-NTCTYSYSYGDG-SFTKGNLAVETLTIGSTSGR---PVSFPGI  196 (431)
T ss_pred             CCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCC-CCCeeEEEeCCC-CceeeEEEEEEEEeccCCCC---cceeCCE
Confidence            4578999999999999999999998642   37543 469999999998 77899999999999875321   1246799


Q ss_pred             EEeeeeeccCCCCCCCCCceEEecCCCCCChHHHHHhcCCCCCeEEEeecCC-----CCceEEECCCCC---CCCeeeee
Q 016600           81 IIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD-----DSGRIFFGDQGP---ATQQSTSF  152 (386)
Q Consensus        81 ~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S~~~~L~~~glI~~~FSl~l~~~-----~~G~i~fGg~d~---~~~~~~p~  152 (386)
                      .|||++.+.+.+..  ..+||||||+..+|+++||..  .+.++||+||.+.     ..|+|+||+...   ..+.|+|+
T Consensus       197 ~FGc~~~~~g~f~~--~~~GilGLG~~~~Sl~sql~~--~~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl  272 (431)
T PLN03146        197 VFGCGHNNGGTFDE--KGSGIVGLGGGPLSLISQLGS--SIGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPL  272 (431)
T ss_pred             EEeCCCCCCCCccC--CCceeEecCCCCccHHHHhhH--hhCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEccc
Confidence            99999988776532  468999999999999999975  3556999999642     369999998542   22568999


Q ss_pred             eecCCcceeEEEEEeEEEEcCeeecCCC--------ceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccc
Q 016600          153 LASNGKYITYIIGVETCCIGSSCLKQTS--------FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKC  224 (386)
Q Consensus       153 v~~~~~~~~y~V~l~~i~v~~~~~~~~~--------~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~  224 (386)
                      +.... ..+|.|+|++|.||++.+....        ..+||||||++++||+++|++|.++|.++++..........++.
T Consensus       273 ~~~~~-~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~  351 (431)
T PLN03146        273 VSKDP-DTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSL  351 (431)
T ss_pred             ccCCC-CCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCc
Confidence            75432 4789999999999999876322        36999999999999999999999999998875443333345678


Q ss_pred             ccccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEEEEccCCCceEEcceeeeeEEEEEecCCCEEEEEc
Q 016600          225 CYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSH  304 (386)
Q Consensus       225 C~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~  304 (386)
                      ||.....  ..+|+|+|+|. |..+.+++++|++....  +.+|+++.... +.||||+.|||++|||||++++||||++
T Consensus       352 C~~~~~~--~~~P~i~~~F~-Ga~~~l~~~~~~~~~~~--~~~Cl~~~~~~-~~~IlG~~~q~~~~vvyDl~~~~igFa~  425 (431)
T PLN03146        352 CYSSTSD--IKLPIITAHFT-GADVKLQPLNTFVKVSE--DLVCFAMIPTS-SIAIFGNLAQMNFLVGYDLESKTVSFKP  425 (431)
T ss_pred             cccCCCC--CCCCeEEEEEC-CCeeecCcceeEEEcCC--CcEEEEEecCC-CceEECeeeEeeEEEEEECCCCEEeeec
Confidence            9975422  57899999995 78999999999987654  57899998764 5799999999999999999999999999


Q ss_pred             CCCCC
Q 016600          305 SNCQD  309 (386)
Q Consensus       305 ~~C~~  309 (386)
                      .+|+.
T Consensus       426 ~~C~~  430 (431)
T PLN03146        426 TDCTK  430 (431)
T ss_pred             CCcCc
Confidence            99975

>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>cd06094 RP_Saci_like RP_Saci_like, retropepsin family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query386
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 4e-05
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure 
Iteration: 1

 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 125/325 (38%), Gaps = 53/325 (16%)
Query: 47  YTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 106
           YT+  S +G + ED++ +  G + +        V I    +    +L G+  +G++GL  
Sbjct: 72  YTQG-SWTGFVGEDLVTIPKGFNTSFL------VNIATIFESENFFLPGIKWNGILGLAY 124
Query: 107 GEISVPS---------LLAKAGLIRNSFSMCF---------DKDDSGRIFFGDQGPATQQ 148
             ++ PS         L+ +A  I N FSM              + G +  G   P+  +
Sbjct: 125 ATLAKPSSSLETFFDSLVTQAN-IPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYK 183
Query: 149 STSFLASNGKYITYIIGVETCCIGSS-----CLKQTSFKAIVDSGSSFTFLPKEVYETIA 203
              +     +   Y I +    IG       C +  + KAIVDSG++   LP++V++ + 
Sbjct: 184 GDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVV 243
Query: 204 AEFDRQVNDTITSFEGYPWK----CCYKSSSQRLPKLP--SVKLMXXXXXXXXXXXXXXX 257
               R     I  F    W      C+ +S       P  S+ L                
Sbjct: 244 EAVARA--SLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQ 301
Query: 258 IYGTQVVTG-------FCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDL 310
           +Y  Q + G       +   I P    +  IG   M G+ V+FDR   ++G++ S C ++
Sbjct: 302 LY-IQPMMGAGLNYECYRFGISPSTNAL-VIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359
Query: 311 NDGTKSPLTPGP----GTPSNPLPA 331
                S ++ GP       SN +PA
Sbjct: 360 AGAAVSEIS-GPFSTEDVASNCVPA 383

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query386
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 8e-52
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 4e-46
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-42
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-20
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-19
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 4e-18
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 3e-16
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 2e-14
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 8e-14
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 2e-13
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 8e-13
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-12
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-12
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 5e-12
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-12
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-11
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 2e-11
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-11
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 5e-11
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 5e-11
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 7e-11
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 7e-11
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 9e-11
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-10
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-10
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-10
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-10
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-10
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-10
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-10
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 8e-08
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 5e-06
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 9e-06
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 3e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  176 bits (448), Expect = 8e-52
 Identities = 59/327 (18%), Positives = 106/327 (32%), Gaps = 32/327 (9%)

Query: 9   YSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGG 68
              +  S +    C          C      C           +  G L ED+L + +  
Sbjct: 65  CHSTQCSRANTHQCLSCPAASRPGCHKNT--CGLMSTNPITQQTGLGELGEDVLAIHATQ 122

Query: 69  DNALKNSVQASV---IIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSF 125
            +  +     +V   +  C               G+ GLG   IS+P+ LA    ++  F
Sbjct: 123 GSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQF 182

Query: 126 SMCFDKDDS--GRIFFGDQGPATQQSTSFLASNGKYIT---------YIIGVETCCIG-- 172
           + C  +  +  G I FGD     +Q  +    +    T         Y + V +  I   
Sbjct: 183 TTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQH 242

Query: 173 ---------SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWK 223
                    S+ +  TS   ++ + +    L + VY+     F +Q+          P+ 
Sbjct: 243 SVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFG 302

Query: 224 CCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGT--- 280
            C+ S+   +   PSV L+  + N  V       +         CL +            
Sbjct: 303 LCFNSNK--INAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEIT 360

Query: 281 IGQNFMTGYRVVFDRENLKLGWSHSNC 307
           +G   +    VVFD    ++G+S S+ 
Sbjct: 361 LGARQLEENLVVFDLARSRVGFSTSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query386
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.96
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.64
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 98.15
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 94.35
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.87
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=5.9e-48  Score=384.87  Aligned_cols=296  Identities=21%  Similarity=0.364  Sum_probs=233.5

Q ss_pred             CCCCCCccccCCCcCCCCCC--CC---CC------CCCCCceeeecC-CCCceEeEEEEEEEEEeecCCCCccc-ccccc
Q 016600           12 SASSTSKHLSCSHRLCDLGT--SC---QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNALK-NSVQA   78 (386)
Q Consensus        12 ~~SsT~~~~~C~~~~C~~~~--~C---~~------~~~~c~~~i~Y~-~g~s~~~G~~~~D~v~l~~~~~~~~~-~~~~~   78 (386)
                      .+|+||+.++|.+..|....  +|   ..      .++.|.|.+.|+ ++ +.++|++++|+|+|++.+....+ ...+.
T Consensus        54 ~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~  132 (413)
T 3vla_A           54 YVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVP  132 (413)
T ss_dssp             CCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEE
T ss_pred             CCCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeC
Confidence            57999999999999997642  23   11      135699999994 65 78999999999999854221100 13557


Q ss_pred             cEEEeeeeeccCCCCCCCCCceEEecCCCCCChHHHHHhcCCCCCeEEEeecCC--CCceEEECCCCCC---------C-
Q 016600           79 SVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPA---------T-  146 (386)
Q Consensus        79 ~~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S~~~~L~~~glI~~~FSl~l~~~--~~G~i~fGg~d~~---------~-  146 (386)
                      ++.|||++++.+.... ..+|||||||++.+|++.||+++++|+++||+||.+.  ..|+|+||+.|..         . 
T Consensus       133 ~~~FGc~~~~~~~g~~-~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~  211 (413)
T 3vla_A          133 RFIFSCAPTSLLQNLA-SGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKT  211 (413)
T ss_dssp             EEEEEEECGGGGTTSC-TTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTT
T ss_pred             CEEEECcccccccCcc-cccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCc
Confidence            8999999987322111 2579999999999999999999988899999999973  4799999999852         3 


Q ss_pred             CeeeeeeecCCc----------ceeEEEEEeEEEEcCeeecCC----------CceEEEeccccceeeCHHHHHHHHHHH
Q 016600          147 QQSTSFLASNGK----------YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEF  206 (386)
Q Consensus       147 ~~~~p~v~~~~~----------~~~y~V~l~~i~v~~~~~~~~----------~~~~iiDSGTt~~~lP~~~~~~l~~~i  206 (386)
                      +.|+|++..+..          ..+|.|+|++|.||++.+...          ..++||||||++++||+++|++|.++|
T Consensus       212 l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~  291 (413)
T 3vla_A          212 LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAF  291 (413)
T ss_dssp             SEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHH
T ss_pred             eeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHH
Confidence            789999876432          269999999999999988632          357999999999999999999999999


Q ss_pred             HHhccccc--ccccccccccccccccCC----CCCCCeEEEEEcC-CceeeecCCeEEEEeecceeeEEEEEEccC---C
Q 016600          207 DRQVNDTI--TSFEGYPWKCCYKSSSQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVD---G  276 (386)
Q Consensus       207 ~~~~~~~~--~~~~~~~~~~C~~~~~~~----~~~~P~i~~~f~g-~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~---~  276 (386)
                      .+++....  ......+++.||..++..    +..+|+|+|+|.| +..|+|++++|++....  +.+|++++..+   .
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~  369 (413)
T 3vla_A          292 IKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLR  369 (413)
T ss_dssp             HHHHHHTTCCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCS
T ss_pred             HHHhcccCCCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcc
Confidence            88764211  111224578999876532    3589999999976 48999999999987654  67899998764   2


Q ss_pred             CceEEcceeeeeEEEEEecCCCEEEEEcC------CCCCCC
Q 016600          277 DIGTIGQNFMTGYRVVFDRENLKLGWSHS------NCQDLN  311 (386)
Q Consensus       277 ~~~IlG~~fl~~~yvvFD~e~~rIGfa~~------~C~~~~  311 (386)
                      +.||||+.||+++|+|||++|+|||||++      +|.+.+
T Consensus       370 ~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~~~~~~c~~~~  410 (413)
T 3vla_A          370 TSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFN  410 (413)
T ss_dssp             SSEEECHHHHTTEEEEEETTTTEEEEEEEGGGGTCCGGGSB
T ss_pred             cceeEehhhhcCeEEEEECCCCEEEEEEecccCcccccCcC
Confidence            58999999999999999999999999985      566654
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 386
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-30
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-20
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-20
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-19
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 6e-19
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-18
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 3e-18
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 4e-18
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 9e-18
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-17
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 3e-17
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 1e-16
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 5e-16
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-15
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-15
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-15
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 1e-14
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-14
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 7e-14
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-12
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-12
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 7e-11
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  117 bits (294), Expect = 2e-30
 Identities = 48/341 (14%), Positives = 103/341 (30%), Gaps = 37/341 (10%)

Query: 2   QDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDI 61
            +   +  +   ++      C    C          +PC            ++G L    
Sbjct: 46  AEIPCSSPTCLLANAYPAPGCPAPSC----GSDKHDKPCTAYPYNPVSGACAAGSLSHTR 101

Query: 62  LHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLI 121
               +   +   + V   V+  C   +    L      G+ GL    +++P+ +A A  +
Sbjct: 102 FVANTTDGSKPVSKVNVGVLAACAPSKLLASLPR-GSTGVAGLANSGLALPAQVASAQKV 160

Query: 122 RNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLA-----SNGKYITYIIGVETCCIGSSCL 176
            N F +C      G   FG       Q T  +      + G    + I   +  +G + +
Sbjct: 161 ANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRV 220

Query: 177 K-----QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKC------- 224
                   +   ++ +   +  L  +VY  +   F + +     +               
Sbjct: 221 PVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFG 280

Query: 225 -CYKSS----SQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFC------LAIQP 273
            CY +     +     +P+V+L     + + +     ++   Q            +A   
Sbjct: 281 VCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGD 340

Query: 274 VDGDIGTIGQNFMTGYRVVFDRENLKLGWS----HSNCQDL 310
                  +G   M  + + FD E  +LG+S     + C  L
Sbjct: 341 GRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query386
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=100.00  E-value=5.1e-40  Score=316.51  Aligned_cols=255  Identities=20%  Similarity=0.354  Sum_probs=207.7

Q ss_pred             CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600            4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG   83 (386)
Q Consensus         4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg   83 (386)
                      +.++.|+|++|+|++...                  |.|.+.|++| .++.|.+++|+|+|++.        ...++.||
T Consensus        60 ~~~~~y~~~~SsT~~~~~------------------~~~~~~Y~~g-~~~~G~~~~D~~~~g~~--------~~~~~~f~  112 (334)
T d1j71a_          60 KQEGTFDPSSSSSAQNLN------------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFA  112 (334)
T ss_dssp             GSSCCBCGGGCTTCEEEE------------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred             ccCCcCCcccCCcccCCC------------------cCEEEEeCCC-ceEEEEEEeeEEEEeee--------eccCceee
Confidence            456789999999998854                  8999999986 68999999999999886        56789999


Q ss_pred             eeeeccCCCCCCCCCceEEecCCCCCC--------hHHHHHhcCCC-CCeEEEeecCCC--CceEEECCCCCCCC----e
Q 016600           84 CGMKQSGGYLDGVAPDGLIGLGLGEIS--------VPSLLAKAGLI-RNSFSMCFDKDD--SGRIFFGDQGPATQ----Q  148 (386)
Q Consensus        84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S--------~~~~L~~~glI-~~~FSl~l~~~~--~G~i~fGg~d~~~~----~  148 (386)
                      ++.....       .+||+|||+...+        ++.+|+++|+| +++||+|+.+.+  .|+|+||++|+.++    .
T Consensus       113 ~~~~~~~-------~~GilGlg~~~~~~~~~~~~~~~~~l~~q~~i~~~~fs~~l~~~~~~~g~l~lGg~d~~~~~g~~~  185 (334)
T d1j71a_         113 DVTTTSV-------DQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLT  185 (334)
T ss_dssp             EEEEESS-------SSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEE
T ss_pred             eeeeecc-------ccCccccccccccccccccchhhHHHHhccccccceEEEEeccCCCCCceEEecccChhhccccee
Confidence            9987752       4799999977443        78999999999 899999998753  59999999999874    3


Q ss_pred             eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccc
Q 016600          149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKS  228 (386)
Q Consensus       149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~  228 (386)
                      |+|+.    ...+|.|.+++|.|+++.+. ....+||||||++++||+++|++|.+.+..    ......     .||..
T Consensus       186 ~~~~~----~~~~~~v~l~~i~v~g~~~~-~~~~aiiDSGt~~~~lp~~~~~~l~~~~~~----~~~~~~-----~~~~~  251 (334)
T d1j71a_         186 ALPVT----SSVELRVHLGSINFDGTSVS-TNADVVLDSGTTITYFSQSTADKFARIVGA----TWDSRN-----EIYRL  251 (334)
T ss_dssp             EEECC----CSSSCEEEEEEEEETTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTC----EEETTT-----TEEEC
T ss_pred             Eeeec----cccceEEeeceEEECCEEec-ccccccccCCCcceeccHHHHHHHHHHhCC----EEcCCC-----Ceeec
Confidence            55553    24689999999999999887 567899999999999999999999887732    221111     23433


Q ss_pred             ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEE-EEEEccCCCceEEcceeeeeEEEEEecCCCEEEEEcCCC
Q 016600          229 SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFC-LAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNC  307 (386)
Q Consensus       229 ~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~C-l~i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~C  307 (386)
                      .|.  ...|.++|+|.+|..++|++++|+++...  +..| ++++..  +.||||++|||++|+|||+||+|||||+.+|
T Consensus       252 ~~~--~~~p~i~f~f~~g~~~~i~~~~y~~~~~~--~~~C~~~i~~~--~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~  325 (334)
T d1j71a_         252 PSC--DLSGDAVFNFDQGVKITVPLSELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKY  325 (334)
T ss_dssp             SSS--CCCSEEEEEESTTCEEEEEGGGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECC
T ss_pred             ccc--ccCCCceEEeCCCEEEEEChHHeEEecCC--CCEEEEEecCC--CCcEECHHhhCcEEEEEECCCCEEEEEECCC
Confidence            332  35699999998889999999999987653  4456 577654  5799999999999999999999999999999


Q ss_pred             CCCCC
Q 016600          308 QDLND  312 (386)
Q Consensus       308 ~~~~~  312 (386)
                      ++.++
T Consensus       326 ~~~~~  330 (334)
T d1j71a_         326 TSSSD  330 (334)
T ss_dssp             CSCCC
T ss_pred             CCcCC
Confidence            87643
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure