Citrus Sinensis ID: 016689

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Secondary Structure (PSIPRED)
cccEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEEccHHHHHcccccccccccccccccEEEEEEEcccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHcccEEEEEEccccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHcHccHHHHcccccHHHHHHcccccccccccccccccccccHHHHHHcccccccEEEEEEEEEccccccccccHHHHHHHHHHHHccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEccccEEcccccEEEEEEEccccHHHHHHHHHHccccEEcccccccccccEEEEEEcccccEEEEEccHHHHHHcc
Coil and Loop (DISEMBL)
mlrtlpiaspssltvstynktslpsqsslklspfcvnndggnnisyCYSTSRRLALFQLgaaipqshfFGAKALKLLRAegstieastsgnmaptsntvteqnVLDWVKSDKRRMLHVVYRVgdldktinslgcgycrfyteclgmkllrkrdipedrytnaflgygpedsHFVVELTYnygvdkydigtgfghfgiAVEDVAKTVDLVKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRAINFYKKAFGMELlrkrdnpdykYTIAVMGYGPEDKNAVLELTYnhgvteydkgngyaqiaigtdDVYKTAEAIKLsggkitrepgplpgintkitacldpdgwksvFVDNLDFLKELE
Flexible Loop (DISEMBL)
mlrtlpiaspssltvsTYNKTslpsqsslklsPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIeastsgnmaptsntvteqnVLDWVKSDKRRMLHVVyrvgdldktinslgcgYCRFYTECLGMKLLRKRDIPEDRYTNAFlgygpedsHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKafgmellrkrdnpdYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLsggkitrepgplpGINTKITacldpdgwkSVFVDNLDFLKELE
Low Complexity Region (SEG)
MLRTLPIASPSSLTVSTYNKTslpsqsslklspFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered region (IsUnstruct)
*******************************SPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRA*********************EQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISOPRED)
**R*************************************************RLALFQLGAAIPQS**************************************LDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISEMBL)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered Region (DISPRO)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGS*******************QNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	384	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	0.851	0.934	0.770	1e-152
Q948T6	291	Lactoylglutathione lyase	no	no	0.742	0.979	0.685	1e-118
Q39366	282	Putative lactoylglutathio	N/A	no	0.710	0.968	0.695	1e-116
P0AC83	135	Lactoylglutathione lyase	yes	no	0.322	0.918	0.553	1e-37
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.322	0.918	0.553	1e-37
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.322	0.918	0.553	1e-37
Q55595	131	Probable lactoylglutathio	N/A	no	0.320	0.938	0.557	3e-37
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.322	0.918	0.530	2e-36
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.322	0.918	0.530	2e-36
P44638	135	Lactoylglutathione lyase	yes	no	0.343	0.977	0.535	5e-36

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  539 bits (1388), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/344 (77%), Positives = 291/344 (84%), Gaps = 17/344 (4%)

Query: 47  CYSTSRRLALFQLG------AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
           C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A      T
Sbjct: 18  CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAA---QATT 74

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT 160
           + ++L WVK+DKRRMLHVVYRVGD+D+TI        +FYTECLGMKLLRKRDIPE++YT
Sbjct: 75  QDDLLTWVKNDKRRMLHVVYRVGDMDRTI--------KFYTECLGMKLLRKRDIPEEKYT 126

Query: 161 NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 220
           NAFLGYGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 221 GPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
           GPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
            RDNP+YKYTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIK
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 341 LSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           L GGKITREPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct: 307 LFGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  426 bits (1094), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/302 (68%), Positives = 245/302 (81%), Gaps = 17/302 (5%)

Query: 88  TSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMK 147
            SG+ A  S  V    VL+W K DK+R+LH VYRVGDLD+TI        + YTEC GMK
Sbjct: 2   ASGSEAEKSPEV----VLEWPKKDKKRLLHAVYRVGDLDRTI--------KCYTECFGMK 49

Query: 148 LLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD 207
           LLRKRD+PE++YTNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA EDV K  +
Sbjct: 50  LLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAE 109

Query: 208 LVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRA 266
            +K+    K+TREPGPVKGG+TVIAF +DPDGY FEL++RGPTPEPLCQVMLRVGDLDR+
Sbjct: 110 KIKSSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRS 169

Query: 267 INFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA 326
           I FY+KA GM+LLRK+D PDYKYTIA++GY  EDK  V+ELTYN+GVTEY KGN YAQ+A
Sbjct: 170 IKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVA 229

Query: 327 IGTDDVYKTAEAIKLS----GGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE 382
           IGT+DVYK+AEA++L     GGKI R+PGPLPG+NTKI + LDPDGWK V VDN DFLKE
Sbjct: 230 IGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKE 289

Query: 383 LE 384
           L+
Sbjct: 290 LQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  417 bits (1071), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/286 (69%), Positives = 236/286 (82%), Gaps = 13/286 (4%)

Query: 103 NVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNA 162
           ++++W K DKRR LHVVYRVGDLD+TI        +FYTEC GMK+LRKRD+PE++Y+NA
Sbjct: 6   DLVEWPKKDKRRFLHVVYRVGDLDRTI--------QFYTECFGMKVLRKRDVPEEKYSNA 57

Query: 163 FLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP 222
           FLG+GPE S+FVVELTYNYGV  YDIGTGFGHF I+ +DV+K V+ V+AKGG VTREPGP
Sbjct: 58  FLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGP 117

Query: 223 VKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR 282
           VKGG +VIAF++DPDGY FEL++RGPTPEPLCQVMLRVGDLDRA+ F +KA GM LLR+ 
Sbjct: 118 VKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRI 177

Query: 283 DNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLS 342
           + P+Y  TI +MGY  E ++ VLELTYN+GVTEY KGN YAQIAIGTDDVYK+AE +K+ 
Sbjct: 178 ERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIV 236

Query: 343 ----GGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
               GGKITRE GPLPG+ TKI + LDPDGWK V VDN DFLKELE
Sbjct: 237 NQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 8/132 (6%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I+        FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSID--------FYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 8/132 (6%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I+        FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSID--------FYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 8/132 (6%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I+        FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSID--------FYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 95/131 (72%), Gaps = 8/131 (6%)

Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
           +LH + RVGDLDK++        +FY + LGM LLRK+D P   +T AF+GYG E  + V
Sbjct: 3   LLHTMIRVGDLDKSL--------QFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAV 54

Query: 175 VELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 234
           +ELT+N+G DKYD+G GFGH  + VED+  T D ++ KGGKV REPGP+K G TVIAF+E
Sbjct: 55  IELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVE 114

Query: 235 DPDGYKFELLE 245
           DPDGYK EL++
Sbjct: 115 DPDGYKIELIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  154 bits (388), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 8/132 (6%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I         FYT  LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSI--------AFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+
Sbjct: 54  VIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFV 113

Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  154 bits (388), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 8/132 (6%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I         FYT  LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSI--------AFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+
Sbjct: 54  VIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFV 113

Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  152 bits (384), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 97/140 (69%), Gaps = 8/140 (5%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           ++LH + RVGDLD++I        +FY + LGM+LLR  + PE +YT AFLGY   +S  
Sbjct: 2   QILHTMLRVGDLDRSI--------KFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
            +ELTYN+GVDKY+ GT +GH  I V+D+  T + V+A GG VTRE GPVKGG+TVIAF+
Sbjct: 54  EIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFV 113

Query: 234 EDPDGYKFELLERGPTPEPL 253
           EDPDGYK E +E   T   L
Sbjct: 114 EDPDGYKIEFIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
359484559	362	PREDICTED: probable lactoylglutathione l	0.940	0.997	0.740	1e-163
449443163	362	PREDICTED: probable lactoylglutathione l	0.942	1.0	0.736	1e-163
225429965	364	PREDICTED: probable lactoylglutathione l	0.851	0.898	0.827	1e-161
296081860	359	unnamed protein product [Vitis vinifera]	0.851	0.910	0.827	1e-161
225445150	355	PREDICTED: probable lactoylglutathione l	0.864	0.935	0.801	1e-160
255546389	369	lactoylglutathione lyase, putative [Rici	0.828	0.861	0.827	1e-158
255550986	389	lactoylglutathione lyase, putative [Rici	0.848	0.838	0.775	1e-157
224119744	355	predicted protein [Populus trichocarpa]	0.916	0.991	0.729	1e-157
357520937	347	Lactoylglutathione lyase [Medicago trunc	0.901	0.997	0.698	1e-156
449530241	354	PREDICTED: probable lactoylglutathione l	0.911	0.988	0.731	1e-156

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/385 (74%), Positives = 323/385 (83%), Gaps = 24/385 (6%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+A+    ++S++   S  S+    LS F +              SR +    +G
Sbjct: 1   MVRIIPMATSFRPSLSSFG-FSTSSRLGFPLSTFNI--------------SRTVTSLHVG 45

Query: 61  AAIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
           +AIPQS  FG  A KLLR  EG+ +  + +GN+A  S +  ++NVL+WVK DKRRMLHVV
Sbjct: 46  SAIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVV 105

Query: 120 YRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 179
           YRVGDLD+TI        +FYTECLGMKLLR+RDIPE+RYTNAFLGYGPEDSHFV+ELTY
Sbjct: 106 YRVGDLDRTI--------KFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTY 157

Query: 180 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 239
           NYGVDKYDIG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKGG+TVIAFIEDPDGY
Sbjct: 158 NYGVDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGY 217

Query: 240 KFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE 299
           KFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YKYTIA+MGYGPE
Sbjct: 218 KFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPE 277

Query: 300 DKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 359
           DKNAVLELTYN+GV+EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK
Sbjct: 278 DKNAVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 337

Query: 360 ITACLDPDGWKSVFVDNLDFLKELE 384
           ITAC+DPDGWKSVFVDN+DFLKEL+
Sbjct: 338 ITACVDPDGWKSVFVDNIDFLKELD 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443163|ref|XP_004139350.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/384 (73%), Positives = 327/384 (85%), Gaps = 22/384 (5%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F  +   G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGFSRS---GLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
           RVGDLDKTI        +FYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYN
Sbjct: 107 RVGDLDKTI--------KFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYN 158

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
           YGVDKYDIGT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYK
Sbjct: 159 YGVDKYDIGTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYK 218

Query: 241 FELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED 300
           FEL+ERGPTPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYKYTIA+MGYGPED
Sbjct: 219 FELIERGPTPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYKYTIAMMGYGPED 278

Query: 301 KNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 360
           KNAV+ELTYN+GVT+Y+KGN YAQIAIGTDDVY+TAEA+KLSGGK+TREPGPLPGINTKI
Sbjct: 279 KNAVMELTYNYGVTDYEKGNAYAQIAIGTDDVYRTAEAVKLSGGKVTREPGPLPGINTKI 338

Query: 361 TACLDPDGWKSVFVDNLDFLKELE 384
           TACLDPDGWK+VFVDN+DFLKELE
Sbjct: 339 TACLDPDGWKTVFVDNVDFLKELE 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429965|ref|XP_002283968.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Vitis vinifera]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/337 (82%), Positives = 302/337 (89%), Gaps = 10/337 (2%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 38  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 95

Query: 108 VKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYG 167
            K+DKRRMLHVVYRVG+LDKT+        +FYTECLGMKLLR+ DIPE+RY NAFLGYG
Sbjct: 96  AKTDKRRMLHVVYRVGNLDKTM--------KFYTECLGMKLLRRCDIPEERYANAFLGYG 147

Query: 168 PEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 227
           PEDSHFVVELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG 
Sbjct: 148 PEDSHFVVELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGK 207

Query: 228 TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 287
           TVIAF+EDPDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+Y
Sbjct: 208 TVIAFVEDPDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEY 267

Query: 288 KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKIT 347
           KYTIA+MGYGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKIT
Sbjct: 268 KYTIAMMGYGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKIT 327

Query: 348 REPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           REPGPLP INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 328 REPGPLPVINTKITACLDPDGWKSVFVDNADFLKELE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081860|emb|CBI20865.3| unnamed protein product [Vitis vinifera]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/337 (82%), Positives = 302/337 (89%), Gaps = 10/337 (2%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 33  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 90

Query: 108 VKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYG 167
            K+DKRRMLHVVYRVG+LDKT+        +FYTECLGMKLLR+ DIPE+RY NAFLGYG
Sbjct: 91  AKTDKRRMLHVVYRVGNLDKTM--------KFYTECLGMKLLRRCDIPEERYANAFLGYG 142

Query: 168 PEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 227
           PEDSHFVVELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG 
Sbjct: 143 PEDSHFVVELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGK 202

Query: 228 TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 287
           TVIAF+EDPDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+Y
Sbjct: 203 TVIAFVEDPDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEY 262

Query: 288 KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKIT 347
           KYTIA+MGYGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKIT
Sbjct: 263 KYTIAMMGYGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKIT 322

Query: 348 REPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           REPGPLP INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 323 REPGPLPVINTKITACLDPDGWKSVFVDNADFLKELE 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/347 (80%), Positives = 307/347 (88%), Gaps = 15/347 (4%)

Query: 45  SYCYSTSRRLAL----FQLGA--AIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSN 97
           S+ +STS RL      F +    +IPQS  FG  A KLLR  EG+ +  + +GN+A  S 
Sbjct: 17  SFGFSTSSRLGFPLSTFNISRTLSIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHAST 76

Query: 98  TVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED 157
           +  ++NVL+WVK DKRRMLHVVYRVGDLD+TI        +FYTECLGMKLLR+RDIPE+
Sbjct: 77  SAAQENVLEWVKKDKRRMLHVVYRVGDLDRTI--------KFYTECLGMKLLRRRDIPEE 128

Query: 158 RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 217
           RYTNAFLGYGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAVEDV KTVDL+KAKGGKVT
Sbjct: 129 RYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVT 188

Query: 218 REPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGME 277
           REPGPVKGG+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGME
Sbjct: 189 REPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGME 248

Query: 278 LLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAE 337
           LLRKRDNP+YKYTIA+MGYGPEDKNAVLELTYN+GV+EYDKGNGYAQIAIGTDDVYKTAE
Sbjct: 249 LLRKRDNPEYKYTIAMMGYGPEDKNAVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAE 308

Query: 338 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           AIKLSGGKITREPGPLPGINTKITAC+DPDGWKSVFVDN+DFLKEL+
Sbjct: 309 AIKLSGGKITREPGPLPGINTKITACVDPDGWKSVFVDNIDFLKELD 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 296/331 (89%), Gaps = 13/331 (3%)

Query: 59  LGAAIPQSHFFGAKAL-KLLRAEGST----IEASTSGNMAPTSNTVTEQNVLDWVKSDKR 113
           LG+A+PQSHFFG KA  K  R E ST    +  + +GNMA  S   ++++ L+W KSDKR
Sbjct: 47  LGSAVPQSHFFGLKATSKPWRGEISTSSSGLGVAATGNMAQASTFASQESALEWAKSDKR 106

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           RMLHVVYRVGDLD+TI        +FYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHF
Sbjct: 107 RMLHVVYRVGDLDRTI--------KFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHF 158

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYNYGVDKYDIGT FGHFGIAVEDVAKTV+L+KAKGGKVTREP PVKGG TVIAFI
Sbjct: 159 VIELTYNYGVDKYDIGTAFGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFI 218

Query: 234 EDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAV 293
           EDPDGYKFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YKYTIA+
Sbjct: 219 EDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAM 278

Query: 294 MGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL 353
           MGYGPEDKNAVLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAE IKL GGKITREPGPL
Sbjct: 279 MGYGPEDKNAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEGIKLFGGKITREPGPL 338

Query: 354 PGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           PGINTKITACLDPDGWKSVFVDN+DFLKELE
Sbjct: 339 PGINTKITACLDPDGWKSVFVDNIDFLKELE 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550986|ref|XP_002516541.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223544361|gb|EEF45882.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 259/334 (77%), Positives = 303/334 (90%), Gaps = 8/334 (2%)

Query: 51  SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKS 110
           SRRLALFQLGAA+P+SH  G +A KLLR +G+T EASTS  MA  S  + EQNVL+WV +
Sbjct: 64  SRRLALFQLGAALPESHLLGGRASKLLRVDGNTSEASTSSKMASMSTALAEQNVLEWVSN 123

Query: 111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED 170
           DKRRMLHVVYRVGDLDKTI        +FYTECLGMKLLRKR+IPE+RY+NAFLGYGPE+
Sbjct: 124 DKRRMLHVVYRVGDLDKTI--------KFYTECLGMKLLRKRNIPEERYSNAFLGYGPEE 175

Query: 171 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 230
           S+F VELTYNYG+DKY+IG GFGHFGIAVEDV KTV+LVKAKGG++TR+ GPVKGG ++I
Sbjct: 176 SNFTVELTYNYGIDKYNIGNGFGHFGIAVEDVVKTVNLVKAKGGRITRDSGPVKGGGSII 235

Query: 231 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT 290
           A+++DPDGY FELLERGPTPEPLCQVMLRVGDL+R++NFYKKAFG++LLRKRD+P+ KY+
Sbjct: 236 AYVQDPDGYTFELLERGPTPEPLCQVMLRVGDLERSVNFYKKAFGLQLLRKRDDPESKYS 295

Query: 291 IAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 350
           +A+MGYGPEDKNAVLELTYN+G+TEY+KG+GYAQIAIGT+DVYK+AEAIKL GG+I REP
Sbjct: 296 VAIMGYGPEDKNAVLELTYNYGITEYEKGDGYAQIAIGTNDVYKSAEAIKLCGGEIIREP 355

Query: 351 GPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           GPLPGINTKITACLDPDGWKSVFVDN+DFL+ELE
Sbjct: 356 GPLPGINTKITACLDPDGWKSVFVDNVDFLRELE 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 281/385 (72%), Positives = 315/385 (81%), Gaps = 33/385 (8%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+ S SS+  S+Y          L  S F   N          + SRR A   L 
Sbjct: 1   MVRIIPMVS-SSIRPSSY----------LTCSSFMFCN--------ACAPSRRFAY--LA 39

Query: 61  AAIPQSHFFGAKAL-KLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
            A+PQSHFFG KA  K+ R E  TI    +GNMA  S   T++++L+WVK DKRRMLHVV
Sbjct: 40  TAVPQSHFFGLKASSKIWRGESRTI---ATGNMAQASTAATQESLLEWVKKDKRRMLHVV 96

Query: 120 YRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 179
           YRVGDLD+TI        +FYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTY
Sbjct: 97  YRVGDLDRTI--------KFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTY 148

Query: 180 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 239
           NYGVD YDIG GFGHFGIAVEDVAKTV+L+KAKGGKV REPGPVKGG+TVIAFIEDPDGY
Sbjct: 149 NYGVDSYDIGAGFGHFGIAVEDVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGY 208

Query: 240 KFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE 299
           KFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGM+LLRKRDNP+YKYTIA+MGYG E
Sbjct: 209 KFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMKLLRKRDNPEYKYTIAMMGYGSE 268

Query: 300 DKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 359
           DKN VLELTYN+GVTEYDKGN YAQIAIGTDDVY+TAEA+++ GGK+TREPGPLPGINTK
Sbjct: 269 DKNCVLELTYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVEIFGGKVTREPGPLPGINTK 328

Query: 360 ITACLDPDGWKSVFVDNLDFLKELE 384
           ITACLDPDGWK+VFVDN+DFLKELE
Sbjct: 329 ITACLDPDGWKTVFVDNIDFLKELE 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520937|ref|XP_003630757.1| Lactoylglutathione lyase [Medicago truncatula] gi|355524779|gb|AET05233.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/385 (69%), Positives = 311/385 (80%), Gaps = 39/385 (10%)

Query: 1   MLRTLPIASPSSL-TVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQL 59
           M+R +PIAS S L T+S +N+T                               R++    
Sbjct: 1   MVRVIPIASSSILPTLSLFNRTP------------------------------RISFSHF 30

Query: 60  GAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
             A+PQSH FG KA +L +  G++++  +SGN++ +    + +NVL+WVK DKRRMLHVV
Sbjct: 31  STAVPQSHNFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASPENVLEWVKQDKRRMLHVV 90

Query: 120 YRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 179
           YRVGDLD+TI        +FYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTY
Sbjct: 91  YRVGDLDRTI--------KFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTY 142

Query: 180 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 239
           NYGVDKYDIGT FGHFGIAV+D+ KTV+L++AKGGK+TREPGPVKGG TVIAF+EDPDGY
Sbjct: 143 NYGVDKYDIGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGY 202

Query: 240 KFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE 299
           KFELLERGPTPEPLCQVMLRVGDL+R+I FY+KAFGMELLR RDNPD KYTIA++GYGPE
Sbjct: 203 KFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPE 262

Query: 300 DKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 359
           DK+ VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKLS GK+TREPGPLPGINTK
Sbjct: 263 DKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTK 322

Query: 360 ITACLDPDGWKSVFVDNLDFLKELE 384
           ITACLDPDGWK+VFVDN+DFLKELE
Sbjct: 323 ITACLDPDGWKTVFVDNIDFLKELE 347

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530241|ref|XP_004172104.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/372 (73%), Positives = 315/372 (84%), Gaps = 22/372 (5%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F   +  G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGF---SRSGLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
           RVGDLDKTI        +FYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYN
Sbjct: 107 RVGDLDKTI--------KFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYN 158

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
           YGVDKYDIGT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYK
Sbjct: 159 YGVDKYDIGTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYK 218

Query: 241 FELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED 300
           FEL+ERGPTPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYKYTIA+MGYGPED
Sbjct: 219 FELIERGPTPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYKYTIAMMGYGPED 278

Query: 301 KNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 360
           KNAV+ELTYN+GVT+Y+KGN YAQIAIGTDDVY+TAEA+KLSGGK+TREPGPLPGINTKI
Sbjct: 279 KNAVMELTYNYGVTDYEKGNAYAQIAIGTDDVYRTAEAVKLSGGKVTREPGPLPGINTKI 338

Query: 361 TACLDPDGWKSV 372
           TACLDPDGWK+V
Sbjct: 339 TACLDPDGWKTV 350

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.851	0.934	0.770	3.9e-140
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.322	0.918	0.553	1.3e-36
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.322	0.898	0.540	2.8e-34
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.322	0.898	0.540	2.8e-34
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.322	0.911	0.537	5.8e-34
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.322	0.911	0.518	6.7e-33
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.632	0.815	0.326	5.9e-25
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.640	0.839	0.302	7e-22
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.640	0.825	0.283	5.5e-21
UNIPROTKB|E1BBM1	298	GLOD4 "Uncharacterized protein	0.640	0.825	0.297	9.4e-21

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
 Identities = 265/344 (77%), Positives = 292/344 (84%)

Query:    47 CYSTSRRLALFQLGAA------IPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
             C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A  +   T
Sbjct:    18 CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAAQAT---T 74

Query:   101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT 160
             + ++L WVK+DKRRMLHVVYRVGD+D+TI        +FYTECLGMKLLRKRDIPE++YT
Sbjct:    75 QDDLLTWVKNDKRRMLHVVYRVGDMDRTI--------KFYTECLGMKLLRKRDIPEEKYT 126

Query:   161 NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 220
             NAFLGYGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REP
Sbjct:   127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query:   221 GPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
             GPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR
Sbjct:   187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query:   281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
              RDNP+YKYTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIK
Sbjct:   247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query:   341 LSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
             L GGKITREPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct:   307 LFGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 73/132 (55%), Positives = 98/132 (74%)

Query:   114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
             R+LH + RVGDL ++I+        FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct:     2 RLLHTMLRVGDLQRSID--------FYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query:   174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
             V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct:    54 VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query:   234 EDPDGYKFELLE 245
             EDPDGYK EL+E
Sbjct:   114 EDPDGYKIELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 67/124 (54%), Positives = 86/124 (69%)

Query:   253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
             +   MLRVGDLD++I FY +  GM LLRK +N +YKYT+A +GYG E + AV+ELTYN G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:   313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 372
             V +Y+KGN Y  IAIG DD+Y T + IK +GG +TREPGP+ G  T I    DPDG+   
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIE 125

Query:   373 FVDN 376
              + N
Sbjct:   126 LIQN 129

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 67/124 (54%), Positives = 86/124 (69%)

Query:   253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
             +   MLRVGDLD++I FY +  GM LLRK +N +YKYT+A +GYG E + AV+ELTYN G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:   313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 372
             V +Y+KGN Y  IAIG DD+Y T + IK +GG +TREPGP+ G  T I    DPDG+   
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIE 125

Query:   373 FVDN 376
              + N
Sbjct:   126 LIQN 129

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 71/132 (53%), Positives = 96/132 (72%)

Query:   114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
             R+LH + RVG+L+K++        +FY + LGMKLLRK +  E +YT AF+GY  ED + 
Sbjct:     3 RILHTMLRVGNLEKSL--------QFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENA 54

Query:   174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
             V+ELTYN+GV+KY++GT FGH  I V+DV +TV+ ++  GGKV RE  PV GG TVIAF+
Sbjct:    55 VIELTYNWGVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFV 114

Query:   234 EDPDGYKFELLE 245
             EDPD YK EL++
Sbjct:   115 EDPDNYKIELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/133 (51%), Positives = 93/133 (69%)

Query:   114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-H 172
             ++LH + RVG+L+++I         FYT+ LGMKLLR  + PE +Y+ AF+GYG E +  
Sbjct:     3 QLLHTMIRVGNLERSI--------AFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQ 54

Query:   173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
              V+ELTYN+G +KYD+GTGFGH  I  +D+    + + A GGKVTR PGPV GG T IAF
Sbjct:    55 AVIELTYNWGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAF 114

Query:   233 IEDPDGYKFELLE 245
             +EDPDGYK E ++
Sbjct:   115 VEDPDGYKIEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 92/282 (32%), Positives = 135/282 (47%)

Query:   113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI----------PED-RYTN 161
             +R LH V++VGD  KT          FY + LGMK+LR  +           P D +++ 
Sbjct:     4 KRALHFVFKVGDRTKTAT--------FYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSK 55

Query:   162 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG 221
               +G+GPED HFV ELTYNYGV +Y +G  F   G+ ++  A+ V   K     +T+   
Sbjct:    56 TMVGFGPEDDHFVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVSNAKRLNWPLTQV-- 110

Query:   222 PVKGGNTVIAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
                 G+ +    E P GY+F L+++  P  +P+ +V L V DL R+++++    GM+++ 
Sbjct:   111 ----GDCLY-MTEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIE 165

Query:   281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
             K  N D K  IAVMG+   D    LEL    G  ++    G    A   D +      +K
Sbjct:   166 K--NEDKK--IAVMGFS--DNQCKLELQDIGGAVDHGTAFGRIAFACPRDQLPDIEALMK 219

Query:   341 LSGGKITREPGPL--PGINTKITACL-DPDGWKSVFVDNLDF 379
                 KI      L  PG  T     L DPDG +  FV +  F
Sbjct:   220 KDSEKIITPLVSLDTPGKATVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 87/288 (30%), Positives = 133/288 (46%)

Query:   114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----------DRYTNA 162
             R LH V+++GD  K  N+       F+ + LGM +LR  +  E           +R++  
Sbjct:    12 RALHYVFKIGDRAK--NAF------FFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKT 63

Query:   163 FLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP 222
              +GYGPE SHFV+ELTYNYGV  Y++G  FG   I  +D+   +         VT+  G 
Sbjct:    64 MVGYGPESSHFVIELTYNYGVSSYEMGNDFGGVTIHSKDI---LSRAAEHSYPVTQVSG- 119

Query:   223 VKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 281
              K G+     +  PDGYKF ++++   + +P+  V L V +L  +  ++     +++L +
Sbjct:   120 -KAGS----LLTSPDGYKFYVIDQASASSDPVQSVELNVSNLQNSRKYWHDLLQLKVLEE 174

Query:   282 RDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKL 341
              +          + YG  ++ A LE+T         K  G    AI         EA+K 
Sbjct:   175 NE------ASVRLSYG--EQQASLEITQISEPINRAKAYGRIAFAIPAAQQPPLQEAVKA 226

Query:   342 SGGKITREPGPL--PGINTKITACL-DPDGWKSVFVDNLDF--LKELE 384
             +GG I      L  PG  T     L DPDG +  FVD   F  L ++E
Sbjct:   227 AGGAILTPLITLDTPGKATVTVVILGDPDGHEICFVDEEGFGQLSQVE 274

GO:0022008 "neurogenesis" evidence=IMP

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 247 (92.0 bits), Expect = 5.5e-21, P = 5.5e-21
 Identities = 81/286 (28%), Positives = 135/286 (47%)

Query:   113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI----------PED-RYTN 161
             RR LH V++VG+  +T++        F+ + LGM++LR  +           P D +++ 
Sbjct:     4 RRALHFVFKVGNRFQTVH--------FFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSK 55

Query:   162 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG 221
               +G+GPED HFV ELTYNYG+  Y +G  F   G+ +   A +  +  A+     R   
Sbjct:    56 TMVGFGPEDDHFVAELTYNYGIGDYKLGNDF--MGLTL---ASSQAVSNAR-----RLEW 105

Query:   222 PVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
             P+      +   E P GYKF L +R P+  +P+ +V L V DL +++N++    GM++  
Sbjct:   106 PLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYE 165

Query:   281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
             + +   +    A++GY   D    LEL    G  ++    G    +    ++    + +K
Sbjct:   166 QDEEKKW----ALLGYA--DDQCKLELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMK 219

Query:   341 LSGGKITREPGPL--PGINT-KITACLDPDGWKSVFVDNLDFLKEL 383
                  I      L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   220 RESQSILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 264

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|E1BBM1 GLOD4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 9.4e-21, P = 9.4e-21
 Identities = 85/286 (29%), Positives = 129/286 (45%)

Query:   113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI----------PED-RYTN 161
             RR LH V++VG+  +T     C    FY + LGMK+LR  +           P D +++ 
Sbjct:     4 RRALHFVFKVGNRFET----AC----FYRDVLGMKILRHEEFQDGCKAACNGPHDGKWSK 55

Query:   162 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG 221
                GYGPED HFV +LTY +G+  Y +G  F   GI V       +  K K         
Sbjct:    56 TMAGYGPEDDHFVTKLTYYFGIGSYQLGNDF--LGITVASRQAVSNARKLKW-------- 105

Query:   222 PVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
             P+      +   + P GYKF L +  P   +P+ +V L V DL +++N++    GM++  
Sbjct:   106 PLSEMGDGVFETKAPGGYKFYLQDCSPPQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYE 165

Query:   281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
             +    D K   A++GY   D    LEL    G  ++  G G    +    ++    + +K
Sbjct:   166 E----DEKKQRALLGYA--DNQCKLELRAIPGKVDHATGFGRIAFSCPQKELSDLEDLMK 219

Query:   341 LSGGKITREPGPL--PGINT-KITACLDPDGWKSVFVDNLDFLKEL 383
                 KI      L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   220 RENQKILTPLVSLDTPGKATVQVIILADPDGHEICFVGDEAF-REL 264

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7703	0.8515	0.9342	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	384
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-81
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-55
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	4e-51
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	4e-45
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-39
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-38
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-28
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	8e-25
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-22
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-21
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-15
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	8e-15
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	9e-14
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-13
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	3e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	4e-12
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	8e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	6e-11
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	4e-10
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	5e-09
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	2e-07
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	5e-07
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	1e-06
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	2e-06
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-06
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	2e-06
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-06
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	6e-06
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	6e-06
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	6e-06
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	6e-06
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	2e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	6e-05
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	7e-05
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	1e-04
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	3e-04
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	6e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.002
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	0.002
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	0.003
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	0.003
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  594 bits (1533), Expect = 0.0
 Identities = 245/294 (83%), Positives = 268/294 (91%), Gaps = 8/294 (2%)

Query: 91  NMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR 150
             A  S     +++L+W K DKRRMLHVVYRVGDLD+TI        +FYTECLGMKLLR
Sbjct: 1   ASAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTI--------KFYTECLGMKLLR 52

Query: 151 KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVK 210
           KRDIPE++YTNAFLGYGPEDS+FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV+LVK
Sbjct: 53  KRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVK 112

Query: 211 AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFY 270
           AKGGKVTREPGPVKGG +VIAF++DPDGYKFEL++RGPTPEPLCQVMLRVGDLDR+I FY
Sbjct: 113 AKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFY 172

Query: 271 KKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD 330
           +KAFGM+LLRKRDNP+YKYTIA+MGYGPEDK  VLELTYN+GVTEY KGN YAQIAIGTD
Sbjct: 173 EKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTD 232

Query: 331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 384
           DVYKTAEAIKL GGKITREPGPLPGINTKITACLDPDGWK+VFVDN+DFLKELE
Sbjct: 233 DVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  245 bits (626), Expect = 3e-81
 Identities = 87/149 (58%), Positives = 107/149 (71%), Gaps = 8/149 (5%)

Query: 107 WVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGY 166
             K+ KRR+LH + RVGDLDK++         FYTE LGMKLLRKRD PE +++ AFLGY
Sbjct: 10  DPKTKKRRLLHTMLRVGDLDKSL--------DFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 167 GPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG 226
           G E S  V+ELT+N+G +KYD+G GFGH  I V+DV K  + V+A GG V REPGPVKGG
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 227 NTVIAFIEDPDGYKFELLERGPTPEPLCQ 255
            TVIAF+EDPDGYK EL++R  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  176 bits (450), Expect = 3e-55
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 11/131 (8%)

Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
            LH + RV DL+K++         FYT+ LGMKLLR++D PE ++T  FLGY  EDS  V
Sbjct: 1   FLHTMLRVKDLEKSL--------DFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGV 52

Query: 175 VELTYNYGVD-KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           +ELTYN+G +  YD G GFGH   AV+DV    + ++  G +VT+ PG        IAFI
Sbjct: 53  LELTYNWGTEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFI 110

Query: 234 EDPDGYKFELL 244
           +DPDGY  EL+
Sbjct: 111 KDPDGYWIELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  167 bits (425), Expect = 4e-51
 Identities = 63/124 (50%), Positives = 84/124 (67%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           L   MLRVGDLD++++FY +  GM+LLRKRD P+ K+++A +GYG E   AV+ELT+N G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 372
             +YD GNG+  IAIG DDVYK  E ++  GG + REPGP+ G  T I    DPDG+K  
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIE 137

Query: 373 FVDN 376
            +  
Sbjct: 138 LIQR 141

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  151 bits (382), Expect = 4e-45
 Identities = 70/125 (56%), Positives = 92/125 (73%), Gaps = 8/125 (6%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
           RVGDL ++I+        FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN
Sbjct: 3   RVGDLQRSID--------FYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN 54

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
           +GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK
Sbjct: 55  WGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYK 114

Query: 241 FELLE 245
            EL+E
Sbjct: 115 IELIE 119

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  136 bits (345), Expect = 1e-39
 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 3/115 (2%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
             MLRV DL+++++FY    GM+LLR++D P+ K+T+  +GY  ED   VLELTYN G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 315 E-YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           E YD GNG+  +A   DDVY   E ++  G ++T+ PG   G    I    DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPG--DGGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  133 bits (336), Expect = 3e-38
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
           MLRVGDL R+I+FY    GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 376
           + G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++ 
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 120

Query: 377 LD 378
            D
Sbjct: 121 KD 122

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  106 bits (267), Expect = 3e-28
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+ HV  RVGDL+K+++        FYT+ LG KL+ + D  E    +AF          
Sbjct: 1   RIDHVALRVGDLEKSLD--------FYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGR 48

Query: 174 VVELTYNYGVDKYDIGT---GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 230
           V+EL  N        G           +V+DV    D +KA G ++ REPG    G    
Sbjct: 49  VLELLLNETPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS 108

Query: 231 AFIEDPDGYKFEL 243
            +  DPDG   EL
Sbjct: 109 -YFRDPDGNLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 97.8 bits (244), Expect = 8e-25
 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 29/145 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI----------PED-RYTN 161
           RR LH V++VG+ +KTI        +FY E LGMK+LR  +           P D +++ 
Sbjct: 1   RRALHFVFKVGNRNKTI--------KFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSK 52

Query: 162 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG 221
             +GYGPED HFVVELTYNYG+  Y++G  F    I  +                 +   
Sbjct: 53  TMIGYGPEDDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS----------NAKKHNW 102

Query: 222 PVKGGNTVIAFIEDPDGYKFELLER 246
           PV      +  ++ P GYKF L+++
Sbjct: 103 PVTEVEDGVYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 91.3 bits (227), Expect = 1e-22
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            V LRVGDL+++++FY    G +L+ + D+ +     A    G      VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNETPP 59

Query: 315 EYDKG---NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 370
               G   +  A IA   DDV    + +K +G +I REPG   G   + +   DPDG  
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGR-HGWGGRYSYFRDPDGNL 117

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 87.5 bits (217), Expect = 3e-21
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           HV   V DL+  +         FY + LG ++L +     +    AFL  G       +E
Sbjct: 1   HVGLTVPDLEAAV--------AFYEDVLGFEVLERDGGGAEF---AFLRLG----GTRLE 45

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 236
           L +         G G  H    V+DV   V+ +KA G ++   P     G  V A+  DP
Sbjct: 46  L-FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDP 103

Query: 237 DGYKFEL 243
           DG   EL
Sbjct: 104 DGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 39/160 (24%)

Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPE 169
           M   ++R+ D   +++        FY+  LGM LL++ D PE +++  FLGY      P 
Sbjct: 28  MQQTMFRIKDPKASLD--------FYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPT 79

Query: 170 DS----------HFVVELTYNYGVDK------YDIG----TGFGHFGIAVEDVAKTVDLV 209
           D              +ELT+N+G +       Y  G     GFGH GI V+DV K  +  
Sbjct: 80  DPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF 139

Query: 210 KAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELLERG 247
           +  G +  ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 140 EKLGVEFVKKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 73.1 bits (179), Expect = 8e-15
 Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 39/158 (24%)

Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPE 169
           M   +YR+ D   +++        FY+  LGM LL++ D PE +++  F+GY      P 
Sbjct: 76  MQQTMYRIKDPKASLD--------FYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPT 127

Query: 170 D----------SHFVVELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVDLV 209
           D              +ELT+N+G +       Y  G     GFGH GI V+DV K  +  
Sbjct: 128 DPTERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 187

Query: 210 KAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELLE 245
           +  G +  ++P  G +KG    IAFI+DPDGY  E+ +
Sbjct: 188 EELGVEFVKKPNDGKMKG----IAFIKDPDGYWIEIFD 221

Length = 233

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 67.4 bits (165), Expect = 9e-14
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRD---------NPDY--KYTIAVMGYGPEDKNAVLE 306
            +VG+ ++ I FY++  GM++LR  +         N  Y  K++  ++GYGPED + V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 307 LTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDP 366
           LTYN+G+ +Y+ GN +  I I +      A+              P+  +   +     P
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNW----------PVTEVEDGVYEVKAP 117

Query: 367 DGWKSVFVD 375
            G+K   +D
Sbjct: 118 GGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 65.5 bits (160), Expect = 2e-13
 Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 9/114 (7%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            V L V DL+ A+ FY+   G E+L +          A +  G       LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
               G G   +A   DDV    E +K +G +I   P   P    ++    DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 31/149 (20%), Positives = 47/149 (31%), Gaps = 27/149 (18%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYG----- 167
             + HV   V DL+ +I         FYT+ LG++L++      D      L +      
Sbjct: 1   MGIHHVTLAVPDLEASI--------DFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGG 52

Query: 168 ------PEDSHFVVELTYNYGV-DKYDIGT-GFGHFGIAVEDVA---KTVDLVKAKGGKV 216
                            +   V      G  G GH    V+D A     +  +   G ++
Sbjct: 53  PGELLAFFGFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRI 112

Query: 217 TREPGPVKGGNTVIAFIEDPDGYKFELLE 245
                   G   V  +  DPDG   EL  
Sbjct: 113 ELGEPGRGG---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 65.4 bits (159), Expect = 3e-12
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 34/148 (22%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-----GPED--------- 300
           Q M R+ D   +++FY +  GM LL++ D P+ K+++  MGY      P D         
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 301 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 348
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVK 196

Query: 349 EP--GPLPGINTKITACLDPDG-WKSVF 373
           +P  G + G    I    DPDG W  +F
Sbjct: 197 KPNDGKMKG----IAFIKDPDGYWIEIF 220

Length = 233

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 16/123 (13%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
            V DL+            FY E LG ++       +  Y    LG       F+  +   
Sbjct: 2   PVSDLEAAR--------AFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP 49

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
              +    G G  H    V+D+   V  +KA GG +   P     G     ++ DPDG  
Sbjct: 50  ---EPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNL 105

Query: 241 FEL 243
            EL
Sbjct: 106 IEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 34/148 (22%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-----GPED--------- 300
           Q M R+ D   +++FY +  GM LL++ D P+ K+++  +GY      P D         
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTF 89

Query: 301 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 348
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 90  GRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVK 148

Query: 349 EP--GPLPGINTKITACLDPDG-WKSVF 373
           +P  G + G    +    DPDG W  +F
Sbjct: 149 KPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 58.6 bits (142), Expect = 6e-11
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 317
           L V DL+ A  FY++  G E+  + ++ +Y                 +EL          
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--EEEDGEY---AEFRLGLVLALGGFIELI--GLPEPDA 53

Query: 318 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
            G G   +    DD+      +K +GG I   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTE- 315
           L V DL+RA  FY+K FG       D  + +Y      G G              G    
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGA------------GGGLMA 62

Query: 316 ---YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                 G G   I    DD+  T E +  +GGK+ R     PG    I   +DP+G
Sbjct: 63  RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 54.0 bits (129), Expect = 5e-09
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 19/130 (14%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH--- 311
            V L V DL+ +I+FY    G+ L++   N         + +   D      L +     
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 312 ----------GVTEYDKGNGYAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINT 358
                      +       G   +A   DD          +   G +I        G+  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV-- 122

Query: 359 KITACLDPDG 368
                 DPDG
Sbjct: 123 -HVYFRDPDG 131

Length = 138

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 317
           L   D +RA  FY   FG        +    Y +   G G      +++           
Sbjct: 6   LPTTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA--VGGLMKAP-----EPAA 57

Query: 318 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                  +    DDV   A  ++ +GGK+   P  +PG+  +     DP+G
Sbjct: 58  GSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 197 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 245
            AV+DV      V+A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 67  FAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 45/181 (24%), Positives = 59/181 (32%), Gaps = 44/181 (24%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSH 172
           R  HV  RV DLDK+          FY + LG +               +L G      H
Sbjct: 4   RTGHVELRVTDLDKSRE--------FYVDLLGFRETESDK------EYIYLRGIEEFQHH 49

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
            +V                  + G  V   ED+ K  D  +  G  V        GG   
Sbjct: 50  SLVLTKAPS--------AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPE 98

Query: 230 IAFIEDPDGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 274
              +EDP GY  E                  RG +P  L    + V D+ RA+ FYK+  
Sbjct: 99  ALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEEL 158

Query: 275 G 275
           G
Sbjct: 159 G 159

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 23/136 (16%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLG-MKLLRKRDIPEDR-YTNAFLGYGPEDSHFV 174
           HV   V DL+++          FY   LG +     ++  + R +     G      + V
Sbjct: 4   HVELTVRDLERSR--------AFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLV 50

Query: 175 VELTYNYGVDKYDI-GTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPGPVK--GGN 227
           ++        ++D    G  H           VD     +  +G ++   P      G  
Sbjct: 51  LQQADGESAGRHDRRNPGLHHLAFRAPSREA-VDELYARLAKRGAEILYAPREPYAGGPG 109

Query: 228 TVIAFIEDPDGYKFEL 243
               F EDPDG + EL
Sbjct: 110 YYALFFEDPDGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 21/130 (16%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVV 175
           HV  RV DL+ +          FYT+ LG++   +   P   +  A+L  G     H + 
Sbjct: 3   HVALRVPDLEASR--------AFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLHLIE 51

Query: 176 ELTYNYGVDKYDIGTG-FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA-FI 233
           E       D    G G   H    V+D+      +KA G   T    P  G   V   F+
Sbjct: 52  E----DPPDALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFV 104

Query: 234 EDPDGYKFEL 243
            DPDG + EL
Sbjct: 105 RDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 25/140 (17%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVV 175
           H+   V DL+  +        +FY + LG+    R+    E     AFLG G  +    +
Sbjct: 3   HIGIAVPDLEAAL--------KFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--I 50

Query: 176 EL--------TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 227
           EL             ++K   G G  H    V+D+   +  +KA+G ++ +E   +  G 
Sbjct: 51  ELIEPLDDDSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGG 108

Query: 228 TVIAFIEDPDGYKF--ELLE 245
             +AF+   D      EL+E
Sbjct: 109 KRVAFLHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 34/138 (24%), Positives = 50/138 (36%), Gaps = 27/138 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED------ 170
           HV     D  +T+         FYT+ LG++L++K    +D  T   L +G         
Sbjct: 4   HVTLVTRDAQETV--------DFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTL 54

Query: 171 -SHFVVELTYNYGVDKYDIGTG-FGHFGIAVEDVAKTVDLVK---AKGGKVTREPGPVKG 225
            + F        G      G G   H   +V   A      +   A G  V+      + 
Sbjct: 55  LTFFEWPDAGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRF 108

Query: 226 GNTVIAFIEDPDGYKFEL 243
           G   + F EDPDG + EL
Sbjct: 109 GERSLYF-EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 35/136 (25%), Positives = 49/136 (36%), Gaps = 19/136 (13%)

Query: 113 RRMLHVVY---RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE 169
                +V+    V DL++           FY +  G       D+ E RY   F   G  
Sbjct: 5   GEKGTIVWFELPVSDLERAK--------AFYEKVFGWTFEDYFDMGEMRYA-VFPADGAG 55

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
               ++             G G      AV+D+  T++ V A GGKV R      GG   
Sbjct: 56  AGGGLMA------RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR- 108

Query: 230 IAFIEDPDGYKFELLE 245
           IA   DP+G +F L  
Sbjct: 109 IAHFVDPEGNRFGLWS 124

Length = 127

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 11/118 (9%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H+   V DLD            F+ + LG+               AF   G +     VE
Sbjct: 2   HIGIVVPDLDAAA--------AFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVE 52

Query: 177 LTYNYGVDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
           L      + +    G G  H    V+D+   V  ++A+G +V  +          +AF
Sbjct: 53  LIQPLDGESFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.8 bits (107), Expect = 6e-06
 Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 256 VMLRVGDLDRAINFYKKAFG-MELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
           V L V DL+RA  FY      + + R  ++         +GYG         +T      
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-----GAVGYGKGGGGPDFWVTKPFDGE 58

Query: 315 EYDKGNGYAQIAI------GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDP 366
               GNG   +A         D  +  A A+   GG     PG  P       A    DP
Sbjct: 59  PATAGNG-THVAFAAPSREAVDAFH--AAALAA-GGTDEGAPGLRPHYGPGYYAAYVRDP 114

Query: 367 DGWK 370
           DG K
Sbjct: 115 DGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.8 bits (107), Expect = 6e-06
 Identities = 34/135 (25%), Positives = 44/135 (32%), Gaps = 26/135 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           HV   V DL++           FY      LG+K +              +GYG      
Sbjct: 3   HVTLGVNDLERAR--------AFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGP 47

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPG--PVKGGN 227
              +T  +  +    G G  H   A       VD       A GG     PG  P  G  
Sbjct: 48  DFWVTKPFDGEPATAGNGT-HVAFAAPSRE-AVDAFHAAALAAGGTDEGAPGLRPHYGPG 105

Query: 228 TVIAFIEDPDGYKFE 242
              A++ DPDG K E
Sbjct: 106 YYAAYVRDPDGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRD-NPDYK-YTIAVMGYGPEDKNAVLELTYNHG 312
            V L V D D+A+ FY +  G E+         ++  T+A     P      L L     
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAP----PGSPETSLVLAPPAN 56

Query: 313 VTEYDKGN---GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                 G    G   + + TDD+  T E +K  G + T EP  +P     +    DPDG
Sbjct: 57  PAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYG--TVAVFRDPDG 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.8 bits (99), Expect = 6e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDN 284
            V LRV DL+R++ FY+   G+E+L + D+
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 30/137 (21%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             +  V   V DL             FY E  G+ ++       +     +L       H
Sbjct: 2   TALRGVGLGVPDLAAAA--------AFYREVWGLSVV------AEDDGIVYLR-ATGSEH 46

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIA----VEDVAKTVDLVKAKGGKVTREPGPVK--GG 226
            ++ L  +   D+  +      F +A    V+ +A+ V    A+GG V  EPG     GG
Sbjct: 47  HILRLRRS---DRNRLDVV--SFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGG 98

Query: 227 NTVIAFIEDPDGYKFEL 243
                F  DPDG   E 
Sbjct: 99  GYGFRFF-DPDGRLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 46/197 (23%), Positives = 69/197 (35%), Gaps = 48/197 (24%)

Query: 189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE----------DPDG 238
           G G       V+D A   +    +G +  + P  +  G   +A I+          D  G
Sbjct: 70  GDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGG 129

Query: 239 YK-------FELLERGPTPEPLCQVMLRV----------GDLDRAINFYKKAFGMELLRK 281
           YK       FE L      EP   V L            G ++    FY+K FG   +R 
Sbjct: 130 YKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRS 189

Query: 282 RD--------------NPDYKYTIAVM-GYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA 326
            D              +PD K  I +      +DK+ + E    +       G G   IA
Sbjct: 190 FDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYN------GAGVQHIA 243

Query: 327 IGTDDVYKTAEAIKLSG 343
           + TDD+ +T  A++  G
Sbjct: 244 LNTDDIVRTVRALRARG 260

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 20/147 (13%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           HVV  V DL+  +        RFY + LG  +      P       FL   P++ H +  
Sbjct: 4   HVVLYVRDLEAMV--------RFYRDVLGFTV--TDRGPLGGL--VFLSRDPDEHHQIAL 51

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLV---KAKGGKVTREPGPVKGGNTVIAFI 233
           +T            G  H    V+ +    DL    +A G        PV  GN    + 
Sbjct: 52  ITGRPAAPPPG-PAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYF 107

Query: 234 EDPDGYKFEL-LERGPTPEPLCQVMLR 259
            DPDG + EL ++           ML 
Sbjct: 108 RDPDGNRLELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 35/136 (25%), Positives = 49/136 (36%), Gaps = 33/136 (24%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDS 171
             + HV +   DLDK          RF T+  G+++  + D         +  GYG +  
Sbjct: 2   TDIAHVRFEHPDLDKAE--------RFLTD-FGLEVAARTD------DELYYRGYGTD-- 44

Query: 172 HFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK---GGKVTREPGPVKGGNT 228
            FV      Y   K +    F          A   DL KA    G  V  +     GG  
Sbjct: 45  PFV------YVARKGE-KARFVGAAFEAASRA---DLEKAAALPGASVIDDLEAPGGGKR 94

Query: 229 VIAFIEDPDGYKFELL 244
           V   + DPDG+  EL+
Sbjct: 95  VT--LTDPDGFPVELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 260 VGDLDRAINFYKKAFGMELL-RKRDNPDYKYTIAVMGYGPEDKNAVLEL----TYNHGVT 314
           V DL+ A+ FY+   G+    R+    +    +A +G G    N  +EL      +  + 
Sbjct: 8   VPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG----NVQIELIEPLDDDSPIA 63

Query: 315 EY--DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 367
           ++   +G G   IA   DD+      +K  G ++  + GP  G   K  A L P 
Sbjct: 64  KFLEKRGEGLHHIAFEVDDIDAALARLKAQGVRLL-QEGPRIGAGGKRVAFLHPK 117

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 34/134 (25%)

Query: 122 VGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 181
           V DL ++          FY    G K         D    AF   G      V+ L   +
Sbjct: 6   VADLARSR--------AFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---F 44

Query: 182 GVDKY--DIG-----TGFGHFGIA-----VEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
             ++   D G      GF    +A      ++V   +    A G  + + P  V  G   
Sbjct: 45  PREELAKDAGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-Y 103

Query: 230 IAFIEDPDGYKFEL 243
             +  DPDG+ +E+
Sbjct: 104 SGYFADPDGHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 29/122 (23%)

Query: 138 RFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE-DSH-FVVELTYNYGVD----------- 184
            FY E LG+ L+R+              Y PE  S+   + L   Y ++           
Sbjct: 19  EFYVEVLGLTLIRET-------------YRPERKSYKLDLALNGEYQIELFSFPNPPPRP 65

Query: 185 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFIEDPDGYKFEL 243
            Y    G  H   AVED+   V  +KA G +V  EP  V         F  DPDG   EL
Sbjct: 66  SYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFTGKRFTFFYDPDGLPLEL 123

Query: 244 LE 245
            E
Sbjct: 124 YE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 8/41 (19%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRD 153
           +R+ HVV  V D++ T          FYT  LGM+++R  +
Sbjct: 2   KRIDHVVLTVADIEAT--------LDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 286
           V+L V D++  ++FY +  GME++R  +   
Sbjct: 7   VVLTVADIEATLDFYTRVLGMEVVRFGEEVG 37

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
PLN02300	286	lactoylglutathione lyase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.98
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.97
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.97
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.86
PLN02367	233	lactoylglutathione lyase	99.83
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.83
PRK10291	129	glyoxalase I; Provisional	99.81
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.8
PLN02367	233	lactoylglutathione lyase	99.8
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.79
PLN03042	185	Lactoylglutathione lyase; Provisional	99.79
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.78
PRK10291	129	glyoxalase I; Provisional	99.78
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
PLN02300	286	lactoylglutathione lyase	99.75
PLN03042	185	Lactoylglutathione lyase; Provisional	99.75
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.74
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.73
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.73
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.73
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.72
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.72
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.72
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.72
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.71
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.71
PRK11478	129	putative lyase; Provisional	99.71
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.71
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.71
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.7
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.7
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.7
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.69
PRK11478	129	putative lyase; Provisional	99.68
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.68
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.68
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.68
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.68
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.68
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.68
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.67
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.67
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.67
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.66
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.66
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.64
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.64
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.64
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.64
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.64
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.64
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.64
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.64
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.63
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.63
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.63
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.63
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.63
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.62
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.62
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.62
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.62
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.62
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.62
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.62
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.61
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.61
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.61
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.61
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.61
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.61
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.6
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.6
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.6
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.6
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.59
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.59
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.59
PRK06724	128	hypothetical protein; Provisional	99.59
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.58
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.58
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.58
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.58
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.58
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.57
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.57
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.57
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.57
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.57
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.57
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.56
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.56
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.56
PRK06724	128	hypothetical protein; Provisional	99.56
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.56
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.56
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.55
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.55
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.55
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.55
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.55
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.54
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.54
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.54
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.53
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.53
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.53
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.53
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.53
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.52
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.52
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.52
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.52
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.51
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.51
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.51
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.51
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.51
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.51
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.5
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.5
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.5
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.5
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.49
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.49
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.49
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.49
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.48
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.48
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.48
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.48
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.48
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.48
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.47
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.47
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.46
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.46
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.46
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.46
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.45
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.45
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.44
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.43
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.43
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.42
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.42
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.4
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.4
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.39
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.38
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.36
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.35
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.32
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.28
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.26
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.07
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.06
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.02
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.95
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.92
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.85
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.84
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.83
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.81
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.79
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.79
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.73
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.7
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.7
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.49
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.44
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.36
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.34
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.33
PRK10148	147	hypothetical protein; Provisional	97.99
PRK10148	147	hypothetical protein; Provisional	97.78
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.66
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.54
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.52
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.49
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.16
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	95.59
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.15
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	95.03
PF15067	236	FAM124: FAM124 family	94.74
PF15067	236	FAM124: FAM124 family	93.57
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	89.86

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=9e-44  Score=338.99  Aligned_cols=281  Identities=87%  Similarity=1.448  Sum_probs=235.6

Q ss_pred             cccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEE
Q 016689           96 SNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV  175 (384)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l  175 (384)
                      +.+...+.+++|.++++.++.|+.|.|+|+++++        +||+++|||++..+...++..+..+|+..++...++.+
T Consensus         6 ~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~--------~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l   77 (286)
T PLN02300          6 STAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTI--------KFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVV   77 (286)
T ss_pred             ccChhhhhhhcCCccccceEEEEEEEeCCHHHHH--------HHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEE
Confidence            3345667899999899999999999999999999        99999999999876655556667788877655556678


Q ss_pred             EEEecCCCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCCcee
Q 016689          176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQ  255 (384)
Q Consensus       176 el~~~~~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~~~h  255 (384)
                      ++..+.+......+.|+.|++|.|+|+++++++|+++|+++..+|...+++..+.+|++|||||.|||+++.+.+.++.|
T Consensus        78 el~~~~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~  157 (286)
T PLN02300         78 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQ  157 (286)
T ss_pred             EEeccCCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCccee
Confidence            88765554444556789999999999999999999999999988877766666788999999999999999999999999


Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  335 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~  335 (384)
                      +.|.|+|++++.+||+++|||++......++.++...++..+.......+++..+.+...+..+++.+|++|.|+|++++
T Consensus       158 ~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~  237 (286)
T PLN02300        158 VMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKT  237 (286)
T ss_pred             EEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHH
Confidence            99999999999999999999999765544555576666654333334567776655544455678999999999999999


Q ss_pred             HHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccccccC
Q 016689          336 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE  384 (384)
Q Consensus       336 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~~~~  384 (384)
                      +++++++|+++..+|...|+..++.++|+||||+.|+|+++.+|+||||
T Consensus       238 ~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        238 AEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             HHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence            9999999999999988888654578999999999999999999999997

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-41  Score=298.77  Aligned_cols=259  Identities=51%  Similarity=0.876  Sum_probs=229.4

Q ss_pred             hhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----------CceEEEEEeeCCCCc
Q 016689          103 NVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDS  171 (384)
Q Consensus       103 ~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~  171 (384)
                      .++.|.+.+..|+.|+++.|.|.++++        +||+++|||++++..++++           ++|+..++++||+++
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti--------~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEds   77 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTI--------DFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDS   77 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHH--------HHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcc
Confidence            478999999999999999999999999        9999999999999999888           789999999999999


Q ss_pred             cEEEEEEecCCCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCC
Q 016689          172 HFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE  251 (384)
Q Consensus       172 ~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~  251 (384)
                      |+.+||++|+++..|+.|+++.||.|.++|+-..++.++..|.+         +++...++++||||+.|+|+++.+.+.
T Consensus        78 hFViELTYNYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~  148 (299)
T KOG2943|consen   78 HFVIELTYNYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSD  148 (299)
T ss_pred             cEEEEEEeccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCC
Confidence            99999999999999999999999999999999999988887763         234557789999999999999999999


Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      ++..|+|.|.|+++|+.||.++|||++.+.    +.+++.++++++++  +..||++++++......+.+...+++..++
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~  222 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDD  222 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccc
Confidence            999999999999999999999999999864    33467788888866  699999999888777777777777777789


Q ss_pred             HHHHHHHHHHCCCeEecCCccC--CCCC-ceEEEEECCCCCeEEEEecCccccccC
Q 016689          332 VYKTAEAIKLSGGKITREPGPL--PGIN-TKITACLDPDGWKSVFVDNLDFLKELE  384 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~--~~~~-~~~~~~~DPdG~~iElve~~~f~~~~~  384 (384)
                      +..+.+.++..+.++..+....  |++. .+++-+.||||+.|+|+.+++|+|+++
T Consensus       223 ~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  223 LPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             cccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            9999999999987776665432  4432 367889999999999999999999875

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.98  E-value=8.6e-30  Score=243.49  Aligned_cols=234  Identities=26%  Similarity=0.310  Sum_probs=169.3

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+++||.|.|+|+++++        +||+++|||++..+..      ..+++.......++.+.+...       ...+
T Consensus         2 i~~i~hv~l~v~Dl~~s~--------~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~   60 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSR--------EFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAA   60 (294)
T ss_pred             CceeeEEEEEeCCHHHHH--------HHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcC
Confidence            568999999999999999        9999999999875421      134454222222334444432       2347


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC---------------CCCCc
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPL  253 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~---------------~~~~~  253 (384)
                      +.|++|.|+   |+++++++|+++|+++...+..   +..+.+||+|||||.|||++...               .+.++
T Consensus        61 ~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~---~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i  137 (294)
T TIGR02295        61 LSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDG---GQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRL  137 (294)
T ss_pred             ccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCC---CCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceee
Confidence            889999997   7889999999999998865432   34578899999999999987331               12368


Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC--
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD--  331 (384)
                      +||.|.|+|++++++||+++|||++..+...+.+.....++....  .++.+.+..       ..+++++|+||.|+|  
T Consensus       138 ~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~Hiaf~v~d~~  208 (294)
T TIGR02295       138 DHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG--GVHDIALTN-------GNGPRLHHIAYWVHDPL  208 (294)
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC--CcCceEeec-------CCCCceeeEEEEcCCHH
Confidence            999999999999999999999999876543333333334443221  133343322       124688999999988  


Q ss_pred             -HHHHHHHHHHCCCe--EecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          332 -VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 -vd~~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                       ++++.++|+++|++  +..+|+.+..+...++|++||+||.||++....
T Consensus       209 ~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       209 NIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             HHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence             55568999999998  666676544433467999999999999988654

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.97  E-value=9.1e-30  Score=244.46  Aligned_cols=235  Identities=21%  Similarity=0.244  Sum_probs=167.4

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++++|+.|.|+|+++++        +||+++|||++..+..   .   .+++.......++.+.+...       ...|
T Consensus         2 i~~i~Hi~l~V~Dle~s~--------~FY~~~LG~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~-------~~~g   60 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESL--------KHYTDVLGLEETGRDG---Q---RVYLKAWDEWDHYSVILTEA-------DTAG   60 (303)
T ss_pred             cceeeEEEEEeCCHHHHH--------HHHHHhcCCEEeeecC---c---eEEEEeccccccceEeeccC-------CCCc
Confidence            358999999999999999        9999999999875432   1   33444321112334444321       2347


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC-------------------
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------------------  249 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~-------------------  249 (384)
                      +.|++|.|+   |+++++++|+++|+++...+.....+.++.+||+|||||.|||.+....                   
T Consensus        61 ~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~  140 (303)
T TIGR03211        61 LDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRG  140 (303)
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCC
Confidence            899999998   7889999999999998876542222345678999999999999985431                   


Q ss_pred             --CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcE-EEEEeecCCCCcceEEEEeccCCCccccCCCceeEEE
Q 016689          250 --PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA  326 (384)
Q Consensus       250 --~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hia  326 (384)
                        +.+++||.|.|+|++++++||+++|||++..+...+++.. ...++..+.  ..+.+.+...      ....++.|+|
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~g~~~Hia  212 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN--KAHDIAFVGD------PEPGKLHHVS  212 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC--CCcccceecC------CCCCceEEEE
Confidence              1258999999999999999999999999875543333322 233343221  1222222211      1122388999


Q ss_pred             EEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          327 IGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       327 f~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      |.|+|   ++++.++|+++|+++..+|..+....++++||+|||||.||+..
T Consensus       213 f~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       213 FFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            99986   55578899999999988887655433579999999999999984

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.97  E-value=8e-29  Score=236.09  Aligned_cols=234  Identities=18%  Similarity=0.246  Sum_probs=169.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .++.|++|.|+|+++|+        +||+++|||++....+  +   ...|+..+.  .++.+.+....       ..++
T Consensus         2 ~~i~~v~l~V~Dl~~s~--------~FY~~~LGl~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~~-------~~~~   59 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWR--------EFATEVLGMMVASEGE--N---DALYLRLDS--RAHRIAVHPGE-------SDDL   59 (286)
T ss_pred             ceeeEEEEEeCCHHHHH--------HHHHhccCcccccCCC--C---ceEEEEcCC--CceEEEEEECC-------cCCe
Confidence            48999999999999999        9999999999754321  1   234555532  23444443321       2367


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecCCC------------------
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------  249 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~~~------------------  249 (384)
                      .|++|.|+|   +++++++|+++|+++...|...  ..+....++|+|||||.+||+.....                  
T Consensus        60 ~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~  139 (286)
T TIGR03213        60 AYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTG  139 (286)
T ss_pred             eeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccC
Confidence            899999998   8889999999999988765321  22456788999999999999863211                  


Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC--C-cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEE
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD--Y-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA  326 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hia  326 (384)
                      +.+++||.|.|+|++++.+||+++|||++..+...+.  + .+...++.+++  .++.+.+...      ....+++|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~l~~~------~~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNE--RHHSLAFAAG------PSEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECC--CcceEEEecC------CCCCceEEEE
Confidence            2268999999999999999999999999876532221  1 12344555432  2444444321      1246789999


Q ss_pred             EEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          327 IGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       327 f~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |.|+|+++   +.++|+++|+ ....|+.++.+..+++|++||+|+.||+....
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            99988666   7999999999 56666665544468899999999999998743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.86  E-value=2.6e-19  Score=175.56  Aligned_cols=221  Identities=23%  Similarity=0.369  Sum_probs=149.8

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC------Cc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YD  187 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~  187 (384)
                      +++|+.+.|+|+++++        +||++.|||+.........+. ..+.+..|    ...+++........      ..
T Consensus         2 ~i~hi~~~V~D~~~a~--------~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~   68 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAA--------YYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAK   68 (353)
T ss_pred             ceEEEEEEeCCHHHHH--------HHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHh
Confidence            6899999999999999        999999999987663222222 22223332    34566654322211      13


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC-------------------
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------------------  248 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~-------------------  248 (384)
                      .|.|..|++|.|+|+++++++++++|+++..+|.....|.....-+..+.|..+-|+++..                   
T Consensus        69 hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  148 (353)
T TIGR01263        69 HGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALH  148 (353)
T ss_pred             CCCceEEEEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccc
Confidence            5789999999999999999999999999987765431122222223334444444443210                   


Q ss_pred             --CC----CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCC--CcE-EEEEeecCCCCcceEEEEeccCCC---c
Q 016689          249 --TP----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKY-TIAVMGYGPEDKNAVLELTYNHGV---T  314 (384)
Q Consensus       249 --~~----~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~--~~~-~~~~l~~~~~~~~~~lel~~~~~~---~  314 (384)
                        .+    ..++||++.|.  |++++++||+++|||++..+.+...  ... ..++.. .  .....+++..+...   .
T Consensus       149 ~~~~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~-~--~g~~~i~L~ep~~~~~~s  225 (353)
T TIGR01263       149 EPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS-P--DGKVKIPLNEPASGKDKS  225 (353)
T ss_pred             cCCCCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC-C--CCcEEEEEeccCCCCCCC
Confidence              01    14999999999  9999999999999999876654322  122 222222 1  22466777764211   1


Q ss_pred             ------cccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC
Q 016689          315 ------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       315 ------~~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p  350 (384)
                            ....+.|++||||.|+|+++++++|+++|+++..+|
T Consensus       226 ~i~~fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       226 QIEEFLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHHHHHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence                  123478999999999999999999999999998877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=1.9e-19  Score=163.42  Aligned_cols=129  Identities=36%  Similarity=0.667  Sum_probs=106.8

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCC---------------ccEEE
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVV  175 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~l  175 (384)
                      ....+.|+.|+|+|+++++        +||+++|||++..+.+.++.++..+|+++++..               ....+
T Consensus        72 ~~~~~~HtmlRVkDle~Sl--------~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~L  143 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASL--------DFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATI  143 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHH--------HHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEE
Confidence            3468999999999999999        999999999999999999888999999764311               13589


Q ss_pred             EEEecCCCCC------CcCC----CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          176 ELTYNYGVDK------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       176 el~~~~~~~~------~~~g----~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ||+++.+.+.      +..+    .|+.|+||.|+|+++++++|+++|+++..+|...  ...+.+|++|||||+|||+|
T Consensus       144 ELt~n~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g--~~~riaFIkDPDGn~IEL~e  221 (233)
T PLN02367        144 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDG--KMKGIAFIKDPDGYWIEIFD  221 (233)
T ss_pred             EEecCCCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccC--CceEEEEEECCCCCEEEEEe
Confidence            9998776442      4433    4899999999999999999999999999877543  23567899999999999999


Q ss_pred             cCCC
Q 016689          246 RGPT  249 (384)
Q Consensus       246 ~~~~  249 (384)
                      ....
T Consensus       222 ~~~~  225 (233)
T PLN02367        222 LKTI  225 (233)
T ss_pred             cccc
Confidence            7653

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.83  E-value=3.9e-19  Score=153.17  Aligned_cols=138  Identities=63%  Similarity=1.077  Sum_probs=108.1

Q ss_pred             cccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          108 VKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       108 ~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      .++.++++.||.|.|.|+++++        +||+++|||++..+.+.++.++..++++.+....+..+++..+....+..
T Consensus        11 ~~~~~~~i~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   82 (150)
T TIGR00068        11 PKTKKRRLLHTMLRVGDLDKSL--------DFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYD   82 (150)
T ss_pred             cccCCceEEEEEEEecCHHHHH--------HHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCccc
Confidence            4556789999999999999999        99999999998766555555556677765443334556665544333334


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCCc
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  253 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~~  253 (384)
                      .+.++.|++|.|+|+++++++|+++|+++..+|...+++..+.+|++||||++|||++..+...++
T Consensus        83 ~~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  148 (150)
T TIGR00068        83 LGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGL  148 (150)
T ss_pred             CCCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhc
Confidence            456899999999999999999999999998877666666677889999999999999987654443

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PRK10291 glyoxalase I; Provisional

Probab=99.81  E-value=8.5e-19  Score=146.94  Aligned_cols=124  Identities=56%  Similarity=1.057  Sum_probs=99.6

Q ss_pred             EEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEE
Q 016689          119 VYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  198 (384)
Q Consensus       119 ~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~  198 (384)
                      .|.|.|+++|+        +||+++|||++..+...++..+..+|++.++......++++.+.+..+...+.++.|++|.
T Consensus         1 ~l~V~Dle~s~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~   72 (129)
T PRK10291          1 MLRVGDLQRSI--------DFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALS   72 (129)
T ss_pred             CEEecCHHHHH--------HHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEE
Confidence            37899999999        9999999999877665565567788887665444556777755444444556789999999


Q ss_pred             ECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCC
Q 016689          199 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  250 (384)
Q Consensus       199 v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  250 (384)
                      |+|+++++++|+++|+++..++.+..++..+.+|++|||||+|||++....+
T Consensus        73 V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         73 VDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             eCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            9999999999999999998776666556667888999999999999987543

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.9e-18  Score=144.21  Aligned_cols=115  Identities=45%  Similarity=0.896  Sum_probs=92.1

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----------CceEEEEEeeCCCCccEEEEEEecC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNY  181 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~  181 (384)
                      +++.|+.|+|+|+++|+        +||+++|||++.++.+.++           +.+..++++++++..+..+||++++
T Consensus         1 ~~~~Hv~irV~DlerSi--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~   72 (127)
T cd08358           1 RRALHFVFKVGNRNKTI--------KFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNY   72 (127)
T ss_pred             CceEEEEEEeCCHHHHH--------HHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecC
Confidence            47899999999999999        9999999999988776665           4455677776555557799999988


Q ss_pred             CCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          182 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       182 ~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      +..+++.|.+  |++|.|++. ++.++|+++|+++...|.    +   ++|++||||+.|||+.
T Consensus        73 ~~~~~~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          73 GIGDYELGND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCCCCCCC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            7666666666  566666666 456999999999987654    1   7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=1.7e-18  Score=157.17  Aligned_cols=126  Identities=33%  Similarity=0.573  Sum_probs=104.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCC---------------cceEEEEeccCCCcc-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE-  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~lel~~~~~~~~-  315 (384)
                      .+.|++|+|.|+++|++||+++|||++..+.+.++.++.++++++++..               ....|||.++++... 
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            5999999999999999999999999999988888888999998653311               145899998776542 


Q ss_pred             -----ccCC----CceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          316 -----YDKG----NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       316 -----~~~g----~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                           +..+    .|+.||+|.|+|+++++++++++|+++..+|...++  .+++|++|||||+|||+|....
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccc
Confidence                 3333    489999999999999999999999999987764333  4789999999999999997643

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.79  E-value=2.1e-17  Score=150.49  Aligned_cols=194  Identities=24%  Similarity=0.360  Sum_probs=138.4

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC-CCCcC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDI  188 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~  188 (384)
                      +..+.+.-++|.|+|++++.        .||+++||+++..+.+      ..+-++.+  + ...+.|.+.... .....
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~--------~FY~~ilGL~v~~~~~------~~v~L~vg--g-~~LL~L~q~~~a~~~~~~   68 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMT--------SFYQEILGLQVLEETD------GSVTLGVG--G-TPLLTLEQFPDARRPPPR   68 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHH--------HHHHHhhCCeeeeccC------ceEEEeeC--C-EEEEEEEeCCCCCCCCcc
Confidence            44568999999999999999        9999999999986643      24556654  2 246666554332 22235


Q ss_pred             CCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC----------------
Q 016689          189 GTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------  249 (384)
Q Consensus       189 g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~----------------  249 (384)
                      ..|+.|++|.+++   +.++..++.+.|..+. ...++  .....+|+.||+||-||++..+|.                
T Consensus        69 ~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~-Ga~DH--~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~  145 (265)
T COG2514          69 AAGLYHTAFLLPTREDLARVLNHLAEEGIPLV-GASDH--LVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEP  145 (265)
T ss_pred             ccceeeeeeecCCHHHHHHHHHHHHhcCCccc-ccCcc--hhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccc
Confidence            5799999999995   7778899999998886 22232  345688999999999999988642                


Q ss_pred             --------------------CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEec
Q 016689          250 --------------------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY  309 (384)
Q Consensus       250 --------------------~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~  309 (384)
                                          ...|.||.|.|.|++++.+||+++|||++..+  .+    ...|+..+  +.++.+....
T Consensus       146 ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~--~~----~A~F~a~G--~YHHHia~N~  217 (265)
T COG2514         146 LDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR--GP----SALFLASG--DYHHHLAANT  217 (265)
T ss_pred             cCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec--CC----cceEEecC--CcceeEEEec
Confidence                                01489999999999999999999999999765  22    22455554  3466665543


Q ss_pred             -cCCCccc--cCCCceeEEEEEcCC
Q 016689          310 -NHGVTEY--DKGNGYAQIAIGTDD  331 (384)
Q Consensus       310 -~~~~~~~--~~g~g~~hiaf~VdD  331 (384)
                       +......  ....|+..+.+.+++
T Consensus       218 W~s~~~~~~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         218 WNSRGARPRNANASGLAWLEIHTPD  242 (265)
T ss_pred             cccCCCCCCCCCCCCcceEEEEcCC
Confidence             2111111  223577777777766

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.79  E-value=5.6e-18  Score=150.56  Aligned_cols=129  Identities=35%  Similarity=0.671  Sum_probs=102.3

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCC---------------ccEE
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFV  174 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~  174 (384)
                      +...++.|+.|+|.|+++|+        +||+++|||++..+...++..+..+|++++...               ....
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si--------~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~   94 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASL--------DFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKAT   94 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHH--------HHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCE
Confidence            34578999999999999999        999999999998887777777888898753211               1347


Q ss_pred             EEEEecCCCCC------Cc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          175 VELTYNYGVDK------YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       175 lel~~~~~~~~------~~----~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      +||+.+.+...      +.    .+.|+.|++|.|+|+++++++|+++|+++...|..  +...+++|++||||++|||+
T Consensus        95 lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~--~~~~~~~fi~DPdG~~IEl~  172 (185)
T PLN03042         95 IELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDD--GKMKGLAFIKDPDGYWIEIF  172 (185)
T ss_pred             EEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCcc--CCceeEEEEECCCCCEEEEE
Confidence            89987654321      22    22489999999999999999999999999876643  22356788999999999999


Q ss_pred             ecCC
Q 016689          245 ERGP  248 (384)
Q Consensus       245 ~~~~  248 (384)
                      +...
T Consensus       173 e~~~  176 (185)
T PLN03042        173 DLKR  176 (185)
T ss_pred             ECCC
Confidence            9764

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.78  E-value=5.6e-19  Score=160.67  Aligned_cols=158  Identities=23%  Similarity=0.354  Sum_probs=120.3

Q ss_pred             Ccchhhhhhhcccccccccc---------------cch------hhhhhcccCCceeecc----------CCCcccCccc
Q 016689           50 TSRRLALFQLGAAIPQSHFF---------------GAK------ALKLLRAEGSTIEAST----------SGNMAPTSNT   98 (384)
Q Consensus        50 ~~~~~~~~~~~~~~p~~~~~---------------g~~------~~~l~~~~g~~~~~~~----------~~~~~~~~~~   98 (384)
                      +.+..||||+|+++|+|++|               |++      |+||.||+||+||+|.          ++.+.|.+.+
T Consensus        66 ~~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~  145 (265)
T COG2514          66 PPRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEP  145 (265)
T ss_pred             CccccceeeeeeecCCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccc
Confidence            36789999999999999998               444      9999999999999994          4678888889


Q ss_pred             CCcchhhccccc-------ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCc
Q 016689           99 VTEQNVLDWVKS-------DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS  171 (384)
Q Consensus        99 ~~~~~~~~~~~~-------~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~  171 (384)
                      +|++.++..+..       ....|+||+|.|.|++++.        +||+++|||++..+  .+    +..|++.|  ++
T Consensus       146 ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~--------~fY~~~LG~~~~~~--~~----~A~F~a~G--~Y  209 (265)
T COG2514         146 LDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAE--------QFYEDVLGLEVTAR--GP----SALFLASG--DY  209 (265)
T ss_pred             cCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHH--------HHHHHhcCCeeeec--CC----cceEEecC--Cc
Confidence            999998877662       2357999999999999999        99999999999765  22    47889877  45


Q ss_pred             cEEEEE-EecCCC--CCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          172 HFVVEL-TYNYGV--DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       172 ~~~lel-~~~~~~--~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |+++.. +|+...  .+.....|+..+.+.+++-........                     ..+||.|+.|.++
T Consensus       210 HHHia~N~W~s~~~~~~~~~~~GLa~~~i~~~~~~~l~~~~~---------------------~~~Dp~G~~i~~~  264 (265)
T COG2514         210 HHHLAANTWNSRGARPRNANASGLAWLEIHTPDPEKLDATGT---------------------RLTDPWGIVIRVV  264 (265)
T ss_pred             ceeEEEeccccCCCCCCCCCCCCcceEEEEcCCccccccccc---------------------ceecCCCceEEEe
Confidence            556555 564332  222345689889998887443221100                     0289999999874

>PRK10291 glyoxalase I; Provisional

Probab=99.78  E-value=6.1e-18  Score=141.72  Aligned_cols=121  Identities=49%  Similarity=0.930  Sum_probs=94.7

Q ss_pred             eeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHH
Q 016689          257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  336 (384)
Q Consensus       257 ~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~  336 (384)
                      +|.|.|+++|++||+++|||++..+...++..+.+.++..++......+++..+.+...+..+.+..|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999987665555556677777654433345667765444334445568899999999999999


Q ss_pred             HHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          337 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       337 ~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ++|+++|+++..++.+.+++..+.+||+|||||.|||++..
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            99999999998777666554346788999999999999966

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.78  E-value=1.2e-17  Score=143.81  Aligned_cols=134  Identities=47%  Similarity=0.846  Sum_probs=101.2

Q ss_pred             CCCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEE
Q 016689          248 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       248 ~~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      ....+++||.|.|.|++++++||+++|||++..+...++..+.+.+++.+.......+++..+.+..+...+.+..|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            34568999999999999999999999999987655444444555566543332345566654333323334568899999


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcccc
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  381 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~  381 (384)
                      .|+|+++++++++++|+++..+|...+++..+.+||+|||||.|||++...-.|
T Consensus        93 ~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  146 (150)
T TIGR00068        93 GVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKD  146 (150)
T ss_pred             ecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhh
Confidence            999999999999999999988876656554578899999999999999775433

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=3.8e-17  Score=134.46  Aligned_cols=120  Identities=53%  Similarity=0.924  Sum_probs=93.6

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC-CCCcCCCCce
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFG  193 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~  193 (384)
                      |.|++|.|+|+++++        +||+++|||++......+++.+..+++.......+..+++....+. .....+.+..
T Consensus         1 ~~hv~i~v~d~~~a~--------~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   72 (121)
T cd07233           1 FLHTMLRVKDLEKSL--------DFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFG   72 (121)
T ss_pred             CeeEEEEecCcHHHH--------HHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeE
Confidence            579999999999999        9999999999877655444456677887542113456666654332 2334456889


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |++|.++|+++++++++++|+++..+|...  ++.+.+|++|||||+|||+
T Consensus        73 ~i~~~v~did~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          73 HLAFAVDDVYAACERLEEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            999999999999999999999999887655  4567889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN02300 lactoylglutathione lyase

Probab=99.75  E-value=2.5e-17  Score=157.02  Aligned_cols=129  Identities=50%  Similarity=0.874  Sum_probs=104.5

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..++.|+.|.|+|++++.        +||+++|||++......++..|..+++.+++......+++..+.+..++..+++
T Consensus       152 ~~~~~~~~l~~~d~~~a~--------~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~  223 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSI--------KFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNA  223 (286)
T ss_pred             CCcceeEEEEeCCHHHHH--------HHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCc
Confidence            357899999999999999        999999999997655555556777887654333334567666555444556789


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +.|++|.|+|+++++++++++|+++..+|...++.+++.++++||||+.++|++...
T Consensus       224 ~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        224 YAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             eeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccch
Confidence            999999999999999999999999999888777555678889999999999998753

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.75  E-value=4.2e-17  Score=144.94  Aligned_cols=125  Identities=30%  Similarity=0.563  Sum_probs=98.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCC---------------cceEEEEeccCCCcc-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE-  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~lel~~~~~~~~-  315 (384)
                      ++.|++|.|.|+++|++||+++|||++..+...++..+.+.+++.+...               ....++|.++.+... 
T Consensus        27 ~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~  106 (185)
T PLN03042         27 IMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESD  106 (185)
T ss_pred             EEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCccc
Confidence            6999999999999999999999999998887766767788887643211               235788887554321 


Q ss_pred             -----cc----CCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          316 -----YD----KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       316 -----~~----~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                           +.    .+.|+.|++|.|+|+++++++|+++|+++...|....+  .+++|++||||+.|||++...
T Consensus       107 p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        107 PEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             ccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCC
Confidence                 21    12489999999999999999999999999876653222  467889999999999999653

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1e-16  Score=136.32  Aligned_cols=122  Identities=27%  Similarity=0.346  Sum_probs=90.7

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----------CceEEEEEeeCCCCccEEEEEEecC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNY  181 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~  181 (384)
                      .+++||+|.|+|+++++        +||++ |||++..+...++           .....+++...  .....+||....
T Consensus         2 ~~i~Hi~i~v~Dl~~s~--------~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~   70 (142)
T cd08353           2 SRMDNVGIVVRDLEAAI--------AFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFH   70 (142)
T ss_pred             ceeeeEEEEeCCHHHHH--------HHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEec
Confidence            58999999999999999        99998 9999865543322           12334555421  234577876532


Q ss_pred             CCC-------CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          182 GVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       182 ~~~-------~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .+.       ....+.|+.|+||.|+|+++++++|+++|+++..++.... ++.+.+|++||||+.|||+|.
T Consensus        71 ~~~~~~~~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          71 HPAVIADHRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCcCcCCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence            211       1123468999999999999999999999999987654443 467788999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.73  E-value=1.3e-16  Score=131.17  Aligned_cols=120  Identities=41%  Similarity=0.760  Sum_probs=91.6

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC-ccccCCCceeEEEEEcCC
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV-TEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~~~~~g~g~~hiaf~VdD  331 (384)
                      +.||.|.|+|++++++||+++|||++......++..+.++++..........+++....+. .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876654444445556666533113456666543322 223344578899999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      +++++++++++|+++..+|....+  ++.+||+|||||.||++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDGGM--KGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccCCC--ceEEEEECCCCCEEEeC
Confidence            999999999999999988775532  57899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.73  E-value=1.5e-15  Score=148.79  Aligned_cols=222  Identities=23%  Similarity=0.310  Sum_probs=154.3

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ceEEEEEeeCCCCccEEEEEEecCCC---------
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGV---------  183 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~---------  183 (384)
                      ++||.+.|+|..++.        .||+..|||+.+.......+  ......+.-|    ...+.++....+         
T Consensus         1 ~dhvef~v~da~~~~--------~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~   68 (398)
T PLN02875          1 FHHVEFWCGDATNTA--------RRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDP   68 (398)
T ss_pred             CeEEEEEcCCHHHHH--------HHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccc
Confidence            589999999999999        99999999998765442111  1222223322    223333322111         


Q ss_pred             ----------CC------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccC----CCEEEEEEECCCCCEEEE
Q 016689          184 ----------DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       184 ----------~~------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~----g~~~~~~~~DPdG~~iel  243 (384)
                                ..      ...|.|..-++|.|+|++++++++.++|++...+|.....    |...+.-+.-+.|..+-|
T Consensus        69 ~~~~~~~~~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~l  148 (398)
T PLN02875         69 ASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRY  148 (398)
T ss_pred             cccccccccCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEE
Confidence                      00      1356788899999999999999999999998877655422    223455567777888777


Q ss_pred             eecCC---------------C-----C---CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC-----cEEEEEee
Q 016689          244 LERGP---------------T-----P---EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-----KYTIAVMG  295 (384)
Q Consensus       244 ~~~~~---------------~-----~---~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~  295 (384)
                      +++..               .     +   ..++||++.|.+++.++.||+++|||+..+..+.++.     +.....+.
T Consensus       149 Vdr~~~~~~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~  228 (398)
T PLN02875        149 VSYKGFDGAKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLA  228 (398)
T ss_pred             EccCCCCCCccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEE
Confidence            77531               0     0   1599999999999999999999999998865543321     23344444


Q ss_pred             cCCCCcceEEEEeccCCC---c----c---ccCCCceeEEEEEcCCHHHHHHHHHHC----CCeEecCC
Q 016689          296 YGPEDKNAVLELTYNHGV---T----E---YDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKITREP  350 (384)
Q Consensus       296 ~~~~~~~~~lel~~~~~~---~----~---~~~g~g~~hiaf~VdDvd~~~~~l~~~----G~~i~~~p  350 (384)
                      .+  +....++|..+...   .    .   ...|+|++||||.|+||.+++++|+++    |+++...|
T Consensus       229 sp--~g~v~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        229 SN--NEMVLLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             cC--CCcEEEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            33  22467777765321   1    1   245789999999999999999999999    99998854

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.73  E-value=1.7e-16  Score=134.45  Aligned_cols=120  Identities=21%  Similarity=0.273  Sum_probs=91.7

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc------ccCCCceeEEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE------YDKGNGYAQIA  326 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~------~~~g~g~~hia  326 (384)
                      ++|+.|.|.|++++++||+++|||++..+...++  ....++..+    ...+.+........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5899999999999999999999999876543321  233334322    34555554222111      12456889999


Q ss_pred             EEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          327 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       327 f~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      |.|+|+++++++++++|++++.+|...+++ .+.++++||||+.|||++.++.
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCCC
Confidence            999999999999999999999988875654 5899999999999999997754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.8e-16  Score=132.37  Aligned_cols=114  Identities=29%  Similarity=0.580  Sum_probs=87.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-----------CcEEEEEeecCCCCcceEEEEeccCCCccccCCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGN  320 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~  320 (384)
                      ++.|++|.|.|+++|++||+++|||++.++.+.++           +.+..+++...++..+..++|.++++..+++.+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68899999999999999999999999887765554           3444455554333457789999887766666555


Q ss_pred             ceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          321 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       321 g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +  |++|.|++. ++.++|+++|+++...|.       .+++++||||+.|||++
T Consensus        82 ~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  566666666 566999999998886543       27899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.72  E-value=2.8e-16  Score=133.03  Aligned_cols=120  Identities=21%  Similarity=0.250  Sum_probs=91.3

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC------CcC
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDI  188 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~  188 (384)
                      ++|+.|.|+|+++++        +||+++|||++......+  ....+++..+    ...+++........      ...
T Consensus         1 ~~Hi~i~V~D~e~s~--------~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~   66 (136)
T cd08342           1 FDHVEFYVGNAKQLA--------SWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKH   66 (136)
T ss_pred             CeEEEEEeCCHHHHH--------HHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhc
Confidence            589999999999999        999999999987654322  1223444422    33555543221111      124


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      +.+..|++|.|+|+++++++|+++|+++..+|... .++.+.++++||||+.|||+|+...
T Consensus        67 ~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~-~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          67 GDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEE-PGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHcCCeEccCceec-CCeEEEEEEeccCCcEEEEEecCCC
Confidence            56889999999999999999999999999888764 3567889999999999999998765

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.72  E-value=2.5e-16  Score=134.74  Aligned_cols=118  Identities=18%  Similarity=0.258  Sum_probs=87.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc-eEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      .++|+||+|.|+|+++++        +||+++|||++..+...+++. ...+|+..+. . ++.+.+...       .+.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~--------~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~-~-~h~~~~~~~-------~~~   66 (143)
T cd07243           4 AHRLDHCLLTGEDIAETT--------RFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN-K-PHDIAFVGG-------PDG   66 (143)
T ss_pred             CceeCEEEEecCCHHHHH--------HHHHHhcCCEEEEEEecCCCCeEEEEEEecCC-C-cceEEEecC-------CCC
Confidence            458999999999999999        999999999986654332222 2345665432 2 334444321       135


Q ss_pred             CceEEEEEECCHHH---HHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          191 GFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       191 g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ++.|+||.|+|+++   +.++|+++|+++...|..+..+..+.+||+|||||+|||.+.
T Consensus        67 ~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          67 KLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             CceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            89999999999877   568999999999877765543456678999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.72  E-value=1.4e-16  Score=153.09  Aligned_cols=156  Identities=17%  Similarity=0.239  Sum_probs=105.0

Q ss_pred             hhhhhhcccCCceeeccCCCcccCcc-cCCcchh-hcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEE
Q 016689           72 KALKLLRAEGSTIEASTSGNMAPTSN-TVTEQNV-LDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLL  149 (384)
Q Consensus        72 ~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~  149 (384)
                      ..+++.||+|+.+|++.......... ...+... ..+..+..++|+||.|.|+|+++++        +||+++|||++.
T Consensus       101 ~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~--------~FY~~~LG~~~~  172 (303)
T TIGR03211       101 RRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENT--------RFFTEVLGFRLT  172 (303)
T ss_pred             eEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEEEeEEeCCHHHHH--------HHHHHhcCCEEE
Confidence            46789999999999986443221100 0011111 1122233578999999999999999        999999999987


Q ss_pred             eeeeCCCCce-EEEEEeeCCCCccEEEEEEecCCCCCCcCCCC-ceEEEEEECC---HHHHHHHHHHcCCeeeeCCcccc
Q 016689          150 RKRDIPEDRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       150 ~~~~~~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~  224 (384)
                      .....+.+.. ..+|+..+. . ++.+.+...       .+.| +.|+||.|+|   +++++++|+++|+++..+|....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~-------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~  243 (303)
T TIGR03211       173 EQVVLGDGKEQAAAWLSVSN-K-AHDIAFVGD-------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHG  243 (303)
T ss_pred             eeEEcCCCcEEEEEEEEcCC-C-CcccceecC-------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccC
Confidence            6543333322 345665432 1 223332211       1234 8999999997   55578899999999988876654


Q ss_pred             CCCEEEEEEECCCCCEEEEe
Q 016689          225 GGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~~iel~  244 (384)
                      .+..+++||+|||||+||+.
T Consensus       244 ~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       244 ITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             CCCceEEEEECCCCCEEEEe
Confidence            44567899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.71  E-value=1.7e-16  Score=151.62  Aligned_cols=172  Identities=23%  Similarity=0.312  Sum_probs=117.2

Q ss_pred             hhhhhhcccccccccc---------------------cchhhhhhcccCCceeeccCCCcccCcccCCcchhhccccccc
Q 016689           54 LALFQLGAAIPQSHFF---------------------GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDK  112 (384)
Q Consensus        54 ~~~~~~~~~~p~~~~~---------------------g~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (384)
                      -++.|+++.+++.+++                     +..++++.||+|+.+|+.........  .  ............
T Consensus        59 ~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~~--~--~~~~~~~~~~~~  134 (294)
T TIGR02295        59 AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFEMEKVER--L--LRRYHRHRGVSP  134 (294)
T ss_pred             cCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEchhhccc--c--cccccccCCccc
Confidence            3577888777765554                     22477999999999999864322110  0  000000112245


Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ++++||+|.|+|+++++        +||+++|||++......+.+.....|+...  ..++.+.+...       .+.++
T Consensus       135 ~~i~Hv~l~v~dl~~a~--------~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~  197 (294)
T TIGR02295       135 VRLDHFNVFVPDVQRAL--------RFYKEELGFRVTEYTEDDEGNLAAAWLHRK--GGVHDIALTNG-------NGPRL  197 (294)
T ss_pred             eeeeeEEEEeCCHHHHH--------HHHHHhcCCEEEEEeccCCCcEEEEEEecC--CCcCceEeecC-------CCCce
Confidence            78999999999999999        999999999987654333344345565432  22334444321       23689


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCe--eeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~--~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .|+||.|+|   ++++.++|+++|++  +...|.....+...++|++||+||+||++..
T Consensus       198 ~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       198 HHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             eeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            999999998   55578999999998  6666665544556789999999999999874

The enzyme from Bacillus brevis contains manganese.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=2.5e-16  Score=133.95  Aligned_cols=121  Identities=20%  Similarity=0.282  Sum_probs=89.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCC-----------CCcEEEEEeecCCCCcceEEEEeccCCCcc-----
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-----------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE-----  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-----  315 (384)
                      +++||.|.|.|++++++||++ |||++..+...+           .....+.++...  .....+++.....+..     
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP--DGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC--CCCceEEEEEecCCCCcCcCC
Confidence            689999999999999999998 999886543221           123445555432  2255677765322111     


Q ss_pred             --ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          316 --YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       316 --~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                        ...+.|+.|+||.|+|+++++++|+++|+++..++...+++ .+++||+||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~-~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENS-YRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCC-eEEEEEECCCCCEEEeeec
Confidence              12345789999999999999999999999998766554443 4789999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.71  E-value=3.3e-16  Score=130.62  Aligned_cols=122  Identities=21%  Similarity=0.303  Sum_probs=85.5

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-CceEEEEEeeCCCCccEEEEEEecCCC---CCCc
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGV---DKYD  187 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~  187 (384)
                      ..+++||+|.|+|+++++        +||+++|||++..+...++ ..+.. .+..+  + +..+++.....+   ....
T Consensus         4 i~~i~hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~--~-~~~l~l~~~~~~~~~~~~~   71 (129)
T PRK11478          4 LKQVHHIAIIATDYAVSK--------AFYCDILGFTLQSEVYREARDSWKG-DLALN--G-QYVIELFSFPFPPERPSRP   71 (129)
T ss_pred             cceecEEEEEcCCHHHHH--------HHHHHHhCCEeccccccccccccee-eEecC--C-CcEEEEEEecCCCCCCCCC
Confidence            457999999999999999        9999999999864322221 12211 22221  1 346666542211   1112


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ...|+.|++|.|+|+++++++|+++|+++...+.. ..++.+++|++|||||.|||+|.
T Consensus        72 ~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         72 EACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             CCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEeC
Confidence            34578999999999999999999999998643322 22346788999999999999873

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.71  E-value=9.2e-17  Score=138.98  Aligned_cols=119  Identities=26%  Similarity=0.377  Sum_probs=90.0

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC-CCceEEEEEeeCCCC---ccEEEEEEecCCCCCCcCC
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPED---SHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~-~~~~~~~~l~~g~~~---~~~~lel~~~~~~~~~~~g  189 (384)
                      +|+||+|.|+|+++++        +||+++|||++......+ .+....+|+..+...   .++.+.+...       .+
T Consensus         1 ri~Hv~l~V~Dle~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------~~   65 (153)
T cd07257           1 RLGHVVLEVPDFAASF--------DWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQG-------PE   65 (153)
T ss_pred             CccEEEEecCCHHHHH--------HHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcC-------CC
Confidence            5899999999999999        999999999987654333 233456777653211   1112222211       14


Q ss_pred             CCceEEEEEECCHHHHH---HHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          190 TGFGHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~~~---~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .|+.|+||.|+|++++.   ++|+++|+++.+.|+....+...++|++|||||+|||....
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            68999999999999986   99999999999888766656677889999999999998654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.71  E-value=3.6e-16  Score=136.63  Aligned_cols=126  Identities=28%  Similarity=0.321  Sum_probs=89.6

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeee----eC--------------CCCceEEEEEeeCCCCccEE
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKR----DI--------------PEDRYTNAFLGYGPEDSHFV  174 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~----~~--------------~~~~~~~~~l~~g~~~~~~~  174 (384)
                      ++++||+|.|+|+++|+        +||+++|||++..+.    ..              ....+..+++..+.   +..
T Consensus         3 ~~i~Hv~i~V~Dle~s~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~   71 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAV--------KFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIG   71 (162)
T ss_pred             ceEEEEEEEeCCHHHHH--------HHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCc
Confidence            57999999999999999        999999999885321    00              01124566776432   335


Q ss_pred             EEEEecCCCCCC-----cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC-ccc-cC-CCEEEEEEECCCCCEEEEeec
Q 016689          175 VELTYNYGVDKY-----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP-GPV-KG-GNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       175 lel~~~~~~~~~-----~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p-~~~-~~-g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ++|.....+...     ..+.|+.|++|.|+|+++++++|+++|+++...+ ... ++ ...+.+|++|||||.|||+++
T Consensus        72 ieL~~~~~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  151 (162)
T TIGR03645        72 VELFEFKNQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSH  151 (162)
T ss_pred             EEEEeccCCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEc
Confidence            777654332111     1246899999999999999999999998765432 111 11 124688999999999999998


Q ss_pred             CCC
Q 016689          247 GPT  249 (384)
Q Consensus       247 ~~~  249 (384)
                      ...
T Consensus       152 ~~~  154 (162)
T TIGR03645       152 SYE  154 (162)
T ss_pred             Chh
Confidence            643

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.70  E-value=4.8e-16  Score=131.27  Aligned_cols=118  Identities=25%  Similarity=0.323  Sum_probs=90.5

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .+++|++|.|+|+++++        +||+++|||++.....  .   ..+|+..+....++.+.+.....     ...|+
T Consensus         2 ~~l~hi~l~v~dl~~s~--------~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~   63 (134)
T cd08360           2 RRLGHVVLFVPDVEAAE--------AFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGF   63 (134)
T ss_pred             ceeeEEEEEcCCHHHHH--------HHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcc
Confidence            47999999999999999        9999999999865432  1   25566654323355666643211     14689


Q ss_pred             eEEEEEECCHHHHH---HHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          193 GHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~---~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .|++|.|+|++++.   ++|+++|+++...|.....++.+++|++||+|++|||.....
T Consensus        64 ~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          64 HHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            99999999988766   699999999887776665566678899999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.70  E-value=4.5e-16  Score=128.83  Aligned_cols=116  Identities=28%  Similarity=0.320  Sum_probs=85.5

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++++|+.|.|+|+++++        +||+++|||++.....  ++   .+++.......++.+.+...       ...+
T Consensus         2 ~~~l~hv~l~v~Dl~~s~--------~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~   61 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAI--------KHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAG   61 (122)
T ss_pred             cceEeEEEEEeCCHHHHH--------HHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCC
Confidence            368999999999999999        9999999999865421  11   34454322222344444321       2347


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +.|++|.|+   |+++++++|+++|+++...|.....+.++.+||+|||||+||+.+..
T Consensus        62 ~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          62 LDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            889999997   78999999999999988765433334456889999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.6e-16  Score=129.10  Aligned_cols=119  Identities=23%  Similarity=0.372  Sum_probs=86.9

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC---CcCCC
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGT  190 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~~g~  190 (384)
                      +++|++|.|+|+++++        +||+++|||++..+...+...+..+|+..++   +..+++........   .....
T Consensus         1 ~~~Hi~l~v~dl~~s~--------~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~   69 (125)
T cd07241           1 KIEHVAIWTKDLERMK--------AFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERT   69 (125)
T ss_pred             CceEEEEEecCHHHHH--------HHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCC
Confidence            5899999999999999        9999999999865443333444556776542   34566654322111   12335


Q ss_pred             CceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          191 GFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       191 g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |+.|++|.|+|   +++++++|+++|+++..+|.... .+.+.++++|||||.|||.
T Consensus        70 g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~-~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          70 GWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTG-DGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             ceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecC-CCeEEEEEECCCCCEEEeC
Confidence            89999999964   89999999999999987665443 2344577999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.69  E-value=8.9e-16  Score=146.28  Aligned_cols=156  Identities=22%  Similarity=0.330  Sum_probs=108.0

Q ss_pred             hhhhhhcccCCceeeccCCCcc-cCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           72 KALKLLRAEGSTIEASTSGNMA-PTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        72 ~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      .++++.||+||.+|.+.+.... ..... .|.....+ .....+|+||+|.|+|+++++        +||+++|||++..
T Consensus       101 ~~~~f~DPdGn~lEl~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~Hv~l~v~Dle~s~--------~FY~~~LGf~~~~  170 (286)
T TIGR03213       101 GLIKFTDPGGNPLEIYYGAVEDFEKPFV-SPRAVSGF-VTGDQGLGHIVLRVPDVDAAL--------AFYTEVLGFQLSD  170 (286)
T ss_pred             EEEEEECCCCCEEEEEEcccccCCCCCC-CCCCCCcc-ccCCccccEEEEEcCCHHHHH--------HHHHHccCCeEEE
Confidence            4688999999999998653321 11111 11111112 233578999999999999999        9999999999876


Q ss_pred             eeeCCC--C-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCcccc
Q 016689          151 KRDIPE--D-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       151 ~~~~~~--~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~  224 (384)
                      +...+.  + .+..+|+..++  .++.+.+....      ...++.|++|.|+|.++   ++++|+++|+ ....|....
T Consensus       171 ~~~~~~~~g~~~~~~~l~~~~--~~~~~~l~~~~------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~  241 (286)
T TIGR03213       171 VIDLPAGPGVTVRPYFLHCNE--RHHSLAFAAGP------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHT  241 (286)
T ss_pred             eEcccCCCCCcceEEEEEECC--CcceEEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCC
Confidence            532221  1 12356776643  24444443211      23589999999998666   7999999999 566666665


Q ss_pred             CCCEEEEEEECCCCCEEEEeec
Q 016689          225 GGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .++..++|++||||++||+...
T Consensus       242 ~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       242 NDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             CCCeEEEEEECCCCcEEEeecC
Confidence            5678899999999999999763

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PRK11478 putative lyase; Provisional

Probab=99.68  E-value=1.1e-15  Score=127.57  Aligned_cols=121  Identities=15%  Similarity=0.131  Sum_probs=83.2

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-CcEEEEEeecCCCCcceEEEEeccCCCc---cccCCCceeEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVT---EYDKGNGYAQIA  326 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~lel~~~~~~~---~~~~g~g~~hia  326 (384)
                      .+++||.|.|+|++++++||+++|||++..+...+. ..+.. .+...   ....+++.......   ......+..|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN---GQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC---CCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999864321111 11111 12111   13456654322111   112235788999


Q ss_pred             EEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          327 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       327 f~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |.|+|+++++++|++.|+++...+.....+ .+++||+|||||.|||++.
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQ-KRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCC-CEEEEEECCCCCEEEEEeC
Confidence            999999999999999999987543322233 4789999999999999873

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.68  E-value=4.3e-16  Score=134.78  Aligned_cols=121  Identities=17%  Similarity=0.194  Sum_probs=88.3

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCC-CCcEEEEEeecCCCC---cceEEEEeccCCCccccCCCceeEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPED---KNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      +++||.|.|+|++++++||+++||+++..+...+ .......++..+...   .++.+.+..       ..++++.|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999987554333 222344555442210   011111111       11468999999


Q ss_pred             EcCCHHHHH---HHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          328 GTDDVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       328 ~VdDvd~~~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      .|+|++++.   ++|+++|+++.++|+.+..+...++||+|||||.|||......
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~  128 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDL  128 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCcee
Confidence            999999986   9999999999988887665544678999999999999976543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.1e-15  Score=126.27  Aligned_cols=119  Identities=24%  Similarity=0.325  Sum_probs=84.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc---ccCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE---YDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~---~~~g~g~~hiaf~  328 (384)
                      +++||.|.|.|++++++||+++|||++..+...+...+...++..++   +..+++........   .....+..|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999865433333333444454321   34566654322211   1233578999999


Q ss_pred             cC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          329 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       329 Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      |+   |+++++++|+++|+++..+|...+.+ .+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEeC
Confidence            95   58999999999999998777544432 24578999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.6e-15  Score=124.88  Aligned_cols=120  Identities=31%  Similarity=0.409  Sum_probs=86.0

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-ceEEEEEeeCCCCccEEEEEEecCCC---CCCcC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGV---DKYDI  188 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~  188 (384)
                      ++++|++|.|.|+++++        +||+++|||++......++. .+. +.+...  + ...+++......   .....
T Consensus         2 ~~~~hi~l~v~d~~~a~--------~fy~~~lG~~~~~~~~~~~~~~~~-~~~~~~--~-~~~i~l~~~~~~~~~~~~~~   69 (125)
T cd08352           2 FGIHHVAIICSDYEKSK--------EFYVEILGFKVIREVYRPERGSYK-LDLLLN--G-GYQLELFSFPNPPERPSYPE   69 (125)
T ss_pred             CccceEEEEcCCHHHHH--------HHHHHhcCCEEeeeeecCCCCcEE-EEEecC--C-CcEEEEEEcCCCCCCCCCCc
Confidence            47999999999999999        99999999998755332222 222 223221  1 235555432221   11123


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      +.|+.|++|.|+|+++++++|+++|+++..++.... ++...+|++||+||.|||+|
T Consensus        70 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          70 ACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEF-TGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCccccccccCC-CceEEEEEECCCCCEEEecC
Confidence            468899999999999999999999999887653332 34667899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.68  E-value=1.8e-15  Score=129.46  Aligned_cols=118  Identities=11%  Similarity=0.129  Sum_probs=85.7

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcE-EEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      +.+++||.|.|+|++++.+||+++|||++..+...+++.. ...++..+..  .+.+.+...       ..+++.|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEecC-------CCCCceEEEEE
Confidence            4579999999999999999999999999866543322222 2334443322  334444321       13578999999


Q ss_pred             cCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          329 TDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       329 VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |+|+++   +.++|+++|+++..+|..+..+.++.+||+|||||.|||+..
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            999777   568999999998877765543335789999999999999763

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.68  E-value=1.7e-15  Score=128.81  Aligned_cols=118  Identities=23%  Similarity=0.412  Sum_probs=88.1

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |..++.|+.|.|+|+++++        +||+++|||++..+..      ..+++..+    +..+.+......+....+.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~--------~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~   62 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSI--------EFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQ   62 (139)
T ss_pred             CCCcEEEEEEEecCHHHHH--------HHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCC
Confidence            4568999999999999999        9999999999864321      24555543    2344443322222222345


Q ss_pred             CceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          191 GFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       191 g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ++.|++|.++  |+++++++|+++|+++..+|..... ..+.+|++|||||+|||.+..
T Consensus        63 ~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         63 SYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             CeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            7889999998  9999999999999998766654433 557889999999999998765

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.68  E-value=1.7e-15  Score=127.87  Aligned_cols=120  Identities=19%  Similarity=0.227  Sum_probs=89.8

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      |.++.||.|.|.|++++++||+++||+++..+..  .   ...++..+....++.+.+.....     ...++.|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            4579999999999999999999999999865432  1   12344433222345666654221     246899999999


Q ss_pred             CCHHHHH---HHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          330 DDVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       330 dDvd~~~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      +|++++.   ++|+++|+++..+|...+.+..+++||+||+||.|||......
T Consensus        71 ~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~  123 (134)
T cd08360          71 GDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDY  123 (134)
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccccc
Confidence            9888776   5999999998877776665545779999999999999986643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.67  E-value=1.8e-15  Score=131.10  Aligned_cols=122  Identities=23%  Similarity=0.351  Sum_probs=92.4

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC---CCceEEEEEeeCCCCccEEEEEEecCCCCCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP---EDRYTNAFLGYGPEDSHFVVELTYNYGVDKY  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~  186 (384)
                      +..++|+||+|.|+|+++++        +||+++|||++......+   +.....+|+..++  .++.+.+....     
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~--------~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~~-----   69 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAH--------AFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEGP-----   69 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHH--------HHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcCC-----
Confidence            34568999999999999999        999999999986543322   1234567776642  23345543321     


Q ss_pred             cCCCCceEEEEEECCHH---HHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          187 DIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       187 ~~g~g~~hi~~~v~Dv~---~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                       .+.++.|++|.|+|.+   +++++|+++|+++..++...+.++.+.+|++||||++|||....
T Consensus        70 -~~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          70 -GPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             -CCceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence             1368999999998755   68999999999998877766656778899999999999998664

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.67  E-value=9.5e-16  Score=127.35  Aligned_cols=119  Identities=30%  Similarity=0.504  Sum_probs=86.6

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC------Cc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YD  187 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~  187 (384)
                      +++|++|.|+|+++++        +||+++|||++......++..+..+++..+    ...++|........      ..
T Consensus         1 ~i~hv~l~v~D~~~s~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~   68 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAA--------KLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEK   68 (128)
T ss_pred             CCCEEEEEeCCHHHHH--------HHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhc
Confidence            5899999999999999        999999999987554333334556666643    23566654322110      11


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeC-CccccCCCEEEEEE--ECCCCCEEEEee
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  245 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~-p~~~~~g~~~~~~~--~DPdG~~iel~~  245 (384)
                      .+.|..|++|.|+|+++++++|+++|+++..+ |.... ++.+..|+  +||||+.||++|
T Consensus        69 ~~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        69 NGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGA-GGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCC-CCCEEEEecccccCcEEEEecC
Confidence            24588899999999999999999999998764 43332 34456666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.67  E-value=1.9e-15  Score=132.10  Aligned_cols=126  Identities=23%  Similarity=0.242  Sum_probs=88.2

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeee----cC--------------CCCcEEEEEeecCCCCcceEEEEeccC
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR----DN--------------PDYKYTIAVMGYGPEDKNAVLELTYNH  311 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~~~~~~~~~lel~~~~  311 (384)
                      +.+++||.|.|.|+++|++||+++|||++..+.    ..              ....+.+.++..+.   +..+++....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            357999999999999999999999999875321    10              11124556665432   3446776543


Q ss_pred             CCccc-----cCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC-cc-CCCC-CceEEEEECCCCCeEEEEecCc
Q 016689          312 GVTEY-----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP-GP-LPGI-NTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       312 ~~~~~-----~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p-~~-~~~~-~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +....     ..+.|..|++|.|+|+++++++++++|+++..++ .. .++. ..+.+||+|||||.|||++...
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            32211     1246899999999999999999999998765432 11 1221 1378999999999999999763

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.66  E-value=3.3e-15  Score=130.35  Aligned_cols=118  Identities=25%  Similarity=0.384  Sum_probs=84.6

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ++|+||.|.|+|+++++        +||+++|||++......+.+....+|+..+.  .++.+.+...       .+.++
T Consensus         2 ~~l~Hv~l~V~Dl~~s~--------~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~~-------~~~~~   64 (161)
T cd07256           2 QRLDHFNLRVPDVDAGL--------AYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTGG-------NGPRL   64 (161)
T ss_pred             ceEEEEEEecCCHHHHH--------HHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEecC-------CCCce
Confidence            58999999999999999        9999999999865433323333345665332  2334444321       23578


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCee--eeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~--~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .|++|.|+|   +++++++|+++|+..  ...|.....++..++|++|||||.||+++..
T Consensus        65 ~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          65 HHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            999999986   777889999999863  3344433334556899999999999998643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=2.9e-15  Score=123.38  Aligned_cols=119  Identities=18%  Similarity=0.286  Sum_probs=83.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-CcEEEEEeecCCCCcceEEEEeccCCC--c-cccCCCceeEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGV--T-EYDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~lel~~~~~~--~-~~~~g~g~~hiaf  327 (384)
                      .++||.|.|.|++++++||+++|||+.......++ ..+.+ .+....   ...+++......  . ....+.+..|++|
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            68999999999999999999999999875432222 22222 222111   234444322111  1 1123468899999


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      .|+|++++.+++++.|+++..++....++ .+++|++||+||.|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEFTG-KRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCc-eEEEEEECCCCCEEEecC
Confidence            99999999999999999987765433333 468999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.64  E-value=7e-15  Score=119.89  Aligned_cols=114  Identities=25%  Similarity=0.305  Sum_probs=83.8

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCH
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDv  332 (384)
                      +.|+.|.|+|++++++||+++||+++..... +...+  .++..++   ...+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999864432 12223  3344332   1223333221111  2234667999999999


Q ss_pred             HHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          333 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       333 d~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      ++++++++++|+++..+|...+++ ++.++|+|||||.|+|+|
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCc-EEEEEEECCCCCEEEeEC
Confidence            999999999999999888776644 589999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.64  E-value=3.9e-15  Score=123.65  Aligned_cols=119  Identities=23%  Similarity=0.349  Sum_probs=85.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc-c---c--cCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---Y--DKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~---~--~~g~g~~hi  325 (384)
                      +++|+.|.|.|++++++||+++|||++......++.+..+.++..+    ...+++....... .   +  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999987544333334455555432    2455554421111 1   1  124578899


Q ss_pred             EEEcCCHHHHHHHHHHCCCeEecC-CccCCCCCceEEEE--ECCCCCeEEEEe
Q 016689          326 AIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVD  375 (384)
Q Consensus       326 af~VdDvd~~~~~l~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iElve  375 (384)
                      +|.|+|+++++++++++|+++..+ |...+++ .+.+|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGG-KPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCC-CEEEEecccccCcEEEEecC
Confidence            999999999999999999998864 4443443 245566  799999999985

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.64  E-value=4.7e-15  Score=122.68  Aligned_cols=116  Identities=18%  Similarity=0.174  Sum_probs=83.4

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .++.|+.|.|+|++++++||+++|||++.....  +.  . +++.......++.+.+...       ...+..|++|.|+
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~-~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v~   70 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--R-VYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKVL   70 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--e-EEEEccCCCcccEEEeccC-------CCCCeeEEEEEeC
Confidence            478999999999999999999999999865421  11  1 2232211112344444321       2346789999996


Q ss_pred             ---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          331 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       331 ---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                         |++++.++++++|+++...|.....+.++.+||+|||||.||+....+
T Consensus        71 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          71 DDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence               899999999999999887654333322578999999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.64  E-value=4.5e-15  Score=126.70  Aligned_cols=113  Identities=22%  Similarity=0.300  Sum_probs=87.6

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEE
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  195 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  195 (384)
                      +||.|.|+|+++++        +||+++|||++..+..   .  ..+|+...+...++.+.+...       ...++.|+
T Consensus         1 ~Hv~l~V~Dle~s~--------~Fy~~vLG~~~~~~~~---~--~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hi   60 (141)
T cd07258           1 GHVVIGSENFEASR--------DSLVEDFGFRVSDLIE---D--RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHV   60 (141)
T ss_pred             CcEEEecCCHHHHH--------HHHHhcCCCEeeeeeC---C--EEEEEEcCCCCCcceeeeccC-------CCCceEEE
Confidence            59999999999999        9999999999875532   1  467776543333444443211       23589999


Q ss_pred             EEEECCH---HHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          196 GIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       196 ~~~v~Dv---~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +|.|+|+   ++++++|+++|+++...|...+.+..+++|++||||+.||+.....
T Consensus        61 af~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          61 NFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             EEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence            9999864   5679999999999988887776667788899999999999987653

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.64  E-value=1.4e-15  Score=125.53  Aligned_cols=120  Identities=28%  Similarity=0.414  Sum_probs=84.3

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeC--CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcC---
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI---  188 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~---  188 (384)
                      +|+||++.|+|+++++        +||+++|||+++.....  ........++..+  ..++.+.............   
T Consensus         1 ~l~Hi~i~v~d~~~~~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~   70 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAI--------DFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG--EGHIELFLNPSPPPRASGHSFP   70 (128)
T ss_dssp             EEEEEEEEESCHHHHH--------HHHHHTTTSEEEEEEEEESTTEEEEEEEEEST--SSCEEEEEEESSSSSSEEEHHH
T ss_pred             CeEEEEEEcCCHHHHH--------HHHHHHhCCcEEeeeccccccccccceeeccc--ccceeeeeeccccccccccccc
Confidence            6899999999999999        99999999999887662  2223344555543  2233333332222221111   


Q ss_pred             CCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEE
Q 016689          189 GTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       189 g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel  243 (384)
                      ..+..|+++.+.   |+++++++|++.|+++..+|.....+....+|++||||+.|||
T Consensus        71 ~~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   71 EHGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SHTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             cccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            013455666655   6788999999999999998877777777777899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=6.7e-15  Score=121.19  Aligned_cols=117  Identities=29%  Similarity=0.463  Sum_probs=85.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---CCCCcCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIG  189 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g  189 (384)
                      ++++|+.|.|+|+++++        +||+++|||++....+.+  .  .+++..+.    ..+++.....   +.....+
T Consensus         2 ~~l~hi~l~v~d~~~s~--------~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~   65 (125)
T cd07253           2 KRIDHVVLTVADIEATL--------DFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPG   65 (125)
T ss_pred             cccceEEEEecCHHHHH--------HHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCC
Confidence            47999999999999999        999999999987543211  1  23344331    3455543222   1222345


Q ss_pred             CCceEEEEEECC-HHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEee
Q 016689          190 TGFGHFGIAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       190 ~g~~hi~~~v~D-v~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~  245 (384)
                      .|..|++|.+++ +++++++|+++|+++..+|....+  +..+.+|++|||||+||+.+
T Consensus        66 ~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          66 PGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             CCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            688999999985 999999999999999877654432  34578899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.64  E-value=6.4e-15  Score=121.77  Aligned_cols=113  Identities=20%  Similarity=0.304  Sum_probs=83.6

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+++|++|.|+|+++++        +||+++|||++..+.+      ..+|+.......++.+.+...       ...+
T Consensus         4 i~~i~hv~l~v~dl~~a~--------~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~   62 (121)
T cd09013           4 IAHLAHVELLTPKPEESL--------WFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAG   62 (121)
T ss_pred             ccEeeEEEEEeCCHHHHH--------HHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCc
Confidence            468999999999999999        9999999999875532      245665433223445555432       2358


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +.|++|.|+   |+++++++++++|+++...+...  +.+..+|++|||||+||+....
T Consensus        63 ~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          63 LGHIAWRASSPEALERRVAALEASGLGIGWIEGDP--GHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             eEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCC--CCcceEEEECCCCCEEEEEEec
Confidence            899999998   58889999999999875433222  2345779999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.64  E-value=4.6e-15  Score=122.35  Aligned_cols=114  Identities=27%  Similarity=0.354  Sum_probs=83.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+++.|+.|.|+|+++++        +||+++|||++....+      ..+|+.......++.+.+...       ...+
T Consensus         2 ~~~i~hi~l~v~d~~~~~--------~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~   60 (121)
T cd07266           2 ILRLGHVELRVTDLEKSR--------EFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAG   60 (121)
T ss_pred             cceeeEEEEEcCCHHHHH--------HHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCc
Confidence            468999999999999999        9999999999864421      234554221122334444321       2247


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ..|++|.|.   |+++++++++++|+++...|.....+....+|+.|||||+||+...
T Consensus        61 ~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          61 LGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             eeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            889999984   7899999999999998765444444455688999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.63  E-value=7.8e-15  Score=121.31  Aligned_cols=112  Identities=20%  Similarity=0.271  Sum_probs=83.9

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      +|.||+|.|+|+++|+        +||+++|||++..+..  .   ..+|+..++  .++.+.+...       ...++.
T Consensus         2 ~l~~v~l~v~Dl~~s~--------~FY~~~LG~~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~-------~~~~~~   59 (120)
T cd07252           2 SLGYLGVESSDLDAWR--------RFATDVLGLQVGDRPE--D---GALYLRMDD--RAWRIAVHPG-------EADDLA   59 (120)
T ss_pred             cccEEEEEeCCHHHHH--------HHHHhccCceeccCCC--C---CeEEEEccC--CceEEEEEeC-------CCCcee
Confidence            6899999999999999        9999999999864421  1   245555432  3455655432       124788


Q ss_pred             EEEEEECC---HHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecC
Q 016689          194 HFGIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       194 hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      |++|.+++   +++++++|+++|+++...|.+.  ..+....+|++|||||+|||+...
T Consensus        60 ~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          60 YAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             EEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            99999974   8889999999999998765322  234457889999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.63  E-value=8e-15  Score=125.14  Aligned_cols=117  Identities=17%  Similarity=0.256  Sum_probs=88.5

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC--
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD--  331 (384)
                      .||.|.|+|++++++||+++|||++..+...     ...++.+.....++.+.+..       ....++.|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998765321     24455543322234443322       124689999999976  


Q ss_pred             -HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccccc
Q 016689          332 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  382 (384)
Q Consensus       332 -vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~~  382 (384)
                       ++++.++++++|+++..+|+.++.+..+.+||+||||+.|||.-..+..+|
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~~  120 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFAE  120 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceecc
Confidence             457799999999999988887665556889999999999999887765554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=6.7e-15  Score=119.95  Aligned_cols=117  Identities=25%  Similarity=0.329  Sum_probs=86.1

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc--ccCCCceeEEEEEcCCH
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE--YDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~--~~~g~g~~hiaf~VdDv  332 (384)
                      ||.|.|.|++++++||+++|||++..+....+ ...++.+..... ....+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            79999999999999999999999986653222 234444443211 134555554332211  12345778999999999


Q ss_pred             HHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          333 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       333 d~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +++.++++++|+++..+|...++  ++.+||+|||||.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            99999999999999988754444  589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.63  E-value=1.1e-14  Score=122.22  Aligned_cols=116  Identities=30%  Similarity=0.438  Sum_probs=89.1

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEE
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  195 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  195 (384)
                      +||.|.|+|+++++        +||+++|||++......+ +....+|+..++  .++.+.+....      ...++.|+
T Consensus         1 ~Hv~l~V~dl~~a~--------~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl   63 (131)
T cd08343           1 DHVVLRTPDVAATA--------AFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHV   63 (131)
T ss_pred             CcEEEEcCCHHHHH--------HHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEE
Confidence            59999999999999        999999999987654433 333566776542  23455554321      14588999


Q ss_pred             EEEECCHH---HHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          196 GIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       196 ~~~v~Dv~---~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +|.|+|++   +++++|+++|+++..+|...+.+..++++++|||||+|||.+..+
T Consensus        64 ~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          64 AFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence            99999875   688999999999988776555456678899999999999998754

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.63  E-value=1.1e-14  Score=118.74  Aligned_cols=114  Identities=24%  Similarity=0.229  Sum_probs=84.1

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceE
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  194 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  194 (384)
                      +.|+.|.|+|+++++        +||+++|||++..... +..  ..+++..++   ...+.+.......  ....+..|
T Consensus         1 ~~hi~l~v~d~~~s~--------~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~   64 (114)
T cd07247           1 PVWFELPTTDPERAK--------AFYGAVFGWTFEDMGD-GGG--DYAVFSTGG---GAVGGLMKAPEPA--AGSPPGWL   64 (114)
T ss_pred             CEEEEeeCCCHHHHH--------HHHHhccCceeeeccC-CCC--ceEEEEeCC---ccEEEEecCCCCC--CCCCCeEE
Confidence            479999999999999        9999999999875542 122  234454432   1223333222111  12345678


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          195 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       195 i~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ++|.|+|+++++++|+++|+++..+|...+ +.++.++++|||||.|+|+|
T Consensus        65 ~~f~v~di~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          65 VYFAVDDVDAAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            999999999999999999999998886654 45678999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.62  E-value=1e-14  Score=126.25  Aligned_cols=122  Identities=16%  Similarity=0.183  Sum_probs=90.2

Q ss_pred             CCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC---CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          249 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP---DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       249 ~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                      .+.+++||.|.|+|++++++||+++|||++..+....   +....+.++..+.  .++.+.+...      ....++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEEE
Confidence            3568999999999999999999999999986543321   1133455555432  2344444332      124678999


Q ss_pred             EEEcCCHH---HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          326 AIGTDDVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       326 af~VdDvd---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +|.|+|++   ++.++|+++|+++..+|..++.+..+.+|++||+||.|||+....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            99997755   689999999999988877666544688999999999999987654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.1e-14  Score=118.94  Aligned_cols=118  Identities=24%  Similarity=0.401  Sum_probs=87.2

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC-CCCcCCCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTG  191 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g  191 (384)
                      ++|+|++|.|+|+++++        +||+++|||++....   +   ..+++..+.  ....+.+...... .......+
T Consensus         1 ~~i~hi~l~v~d~~~~~--------~Fy~~~lG~~~~~~~---~---~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~   64 (125)
T cd07255           1 TRIGAVTLRVADLERSL--------AFYQDVLGLEVLERT---D---STAVLGTGG--KRPLLVLEEDPDAPPAPPGATG   64 (125)
T ss_pred             CEEEEEEEEECCHHHHH--------HHHHhccCcEEEEcC---C---CEEEEecCC--CeEEEEEEeCCCCCcccCCCCc
Confidence            47999999999999999        999999999997552   1   245665432  2445666543322 12233468


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      ..|++|.|+|   +++++++|+++|+++... ...  +..+.+|++|||||+||+....+.
T Consensus        65 ~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~-~~~--~~~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          65 LYHFAILLPSRADLAAALRRLIELGIPLVGA-SDH--LVSEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             EEEEEEECCCHHHHHHHHHHHHHcCCceecc-ccc--cceeEEEEECCCCCEEEEEEecCc
Confidence            8999999984   889999999999987543 222  344678999999999999987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1.1e-14  Score=118.73  Aligned_cols=117  Identities=24%  Similarity=0.296  Sum_probs=85.0

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC--CCcCCCCceE
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGH  194 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~h  194 (384)
                      ||+|.|.|+++++        +||+++|||++..+.... +....+++... ......+.+.......  ......+..|
T Consensus         1 Hv~l~v~d~~~~~--------~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~   70 (119)
T cd07263           1 LVSLYVDDQDKAL--------AFYTEKLGFEVREDVPMG-GGFRWVTVAPP-GSPETSLVLAPPANPAAMSGLQPGGTPG   70 (119)
T ss_pred             CceEEeCCHHHHH--------HHHHhccCeEEEEeeccC-CCcEEEEEeCC-CCCeeEEEEeCCCCccccccccCCCceE
Confidence            8999999999999        999999999998665322 22334444422 1113455554332221  1123457889


Q ss_pred             EEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          195 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       195 i~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ++|.|+|+++++++|+++|+++..++...  +.++.+|++|||||+|||+|
T Consensus        71 ~~~~v~di~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          71 LVLATDDIDATYEELKARGVEFSEEPREM--PYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             EEEEehHHHHHHHHHHhCCCEEeeccccC--CCceEEEEECCCCCEEEEeC
Confidence            99999999999999999999999877433  34578899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.62  E-value=1.3e-14  Score=124.24  Aligned_cols=114  Identities=24%  Similarity=0.431  Sum_probs=86.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .+++|+.|.|.|+++++        +||+++|||++.....   .  ..+|+..+..  ++.+.+...       ...++
T Consensus         3 ~~l~Hv~i~V~Dle~s~--------~FY~~~LG~~~~~~~~---~--~~~~l~~~~~--~~~~~l~~~-------~~~~~   60 (144)
T cd07239           3 VKISHVVLNSPDVDKTV--------AFYEDVLGFRVSDWLG---D--QMAFLRCNSD--HHSIAIARG-------PHPSL   60 (144)
T ss_pred             ceeeEEEEECCCHHHHH--------HHHHhcCCCEEEEeeC---C--eEEEEECCCC--cceEEEccC-------CCCce
Confidence            47999999999999999        9999999999864321   1  2456765432  334444321       13578


Q ss_pred             eEEEEEECCHHHHH---HHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          193 GHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~---~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .|++|.|+|++++.   ++|+++|+++...+.....+...++||+||+||+|||++...
T Consensus        61 ~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          61 NHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             EEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            89999999987764   899999999987765544455667899999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.62  E-value=1.6e-14  Score=125.61  Aligned_cols=118  Identities=20%  Similarity=0.217  Sum_probs=86.0

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC-CcCCCCc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGF  192 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~  192 (384)
                      +++||+|.|+|+++++        +||+++|||++..+..   .  ...|...+. ..++.+++........ .....++
T Consensus         1 gl~HI~i~V~Dle~s~--------~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l   66 (157)
T cd08347           1 GLHGVTLTVRDPEATA--------AFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTV   66 (157)
T ss_pred             CcccEEEEeCCHHHHH--------HHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCce
Confidence            4799999999999999        9999999999876532   1  233433221 2345677765422221 2223578


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .|++|.|+|   +++++++|+++|+.+.. +..  .+..+.+|++|||||+||+.+..+
T Consensus        67 ~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~-~~~--~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          67 HHVAFRVPDDEELEAWKERLEALGLPVSG-IVD--RFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             EEEEEECCCHHHHHHHHHHHHHCCCCccc-ccc--cccEEEEEEECCCCcEEEEEECCC
Confidence            999999998   89999999999998643 322  234578899999999999998754

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.62  E-value=1.7e-14  Score=119.77  Aligned_cols=113  Identities=16%  Similarity=0.272  Sum_probs=83.3

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |.+++.|+.|.|+|+++|+        +||+++|||++....    +.+  +++..++   +..+++...  .    ...
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~--------~FY~~~lG~~~~~~~----~~~--~~~~~~~---~~~l~~~~~--~----~~~   57 (123)
T cd08351           1 MTVTLNHTIVPARDREASA--------EFYAEILGLPWAKPF----GPF--AVVKLDN---GVSLDFAQP--D----GEI   57 (123)
T ss_pred             CcceEeEEEEEcCCHHHHH--------HHHHHhcCCEeeecc----CCE--EEEEcCC---CcEEEEecC--C----CCC
Confidence            4578999999999999999        999999999986522    122  2233222   234554432  1    123


Q ss_pred             CceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccc------cCCCEEEEEEECCCCCEEEEeec
Q 016689          191 GFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       191 g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~------~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +..|++|.++  |+++++++|+++|+++..+|...      ..++++.+||+|||||.|||++.
T Consensus        58 ~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          58 PPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            4679999887  69999999999999987765433      12456899999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.62  E-value=1.4e-14  Score=119.57  Aligned_cols=120  Identities=23%  Similarity=0.304  Sum_probs=84.1

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-ceEEEEEeeCCCCccEEEEEEecCCCCC--CcCCC
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGT  190 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~  190 (384)
                      +++||+|.|.|+++++        +||+++|||++.......+. .....++.......+..+++........  .....
T Consensus         1 ~i~hv~l~v~d~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~   72 (126)
T cd08346           1 GLHHVTLITRDAQETV--------DFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPG   72 (126)
T ss_pred             CcccEEEEcCChhHhH--------HHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCC
Confidence            4789999999999999        99999999998766543221 1123344322112344666654322211  22234


Q ss_pred             CceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          191 GFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       191 g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      ++.|++|.|+   |+++++++++++|+++...+. .  ++.+.+|++|||||+|||+
T Consensus        73 ~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          73 QIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVD-H--FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEe-e--cceEEEEEECCCCCEEEeC
Confidence            7889999998   469999999999999875433 2  3567889999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.61  E-value=1.9e-14  Score=125.51  Aligned_cols=120  Identities=22%  Similarity=0.261  Sum_probs=83.3

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      |.+++||.|.|+|++++++||+++|||++......++......++....  ..+.+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            4578999999999999999999999999865433322322333443221  233444432       1245789999999


Q ss_pred             CC---HHHHHHHHHHCCCe--EecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          330 DD---VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       330 dD---vd~~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +|   ++++.++|+++|+.  +..+|+.+.....+++||+|||||.||+++...
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~  125 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDY  125 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCc
Confidence            75   77788999999986  334454433223467999999999999987543

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.61  E-value=2.4e-14  Score=125.59  Aligned_cols=122  Identities=22%  Similarity=0.351  Sum_probs=88.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+|+|++|.|+|+++++        +||+++|||++......+.+....+|+...+  .++.+.+...  ..  ....+
T Consensus         4 i~~i~Hi~l~V~Dle~a~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~--~~--~~~~~   69 (166)
T cd09014           4 VRRLDHVNLLASDVDANR--------DFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRD--PA--GARGR   69 (166)
T ss_pred             cceeeeEEEEcCCHHHHH--------HHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecC--CC--CCCCC
Confidence            468999999999999999        9999999999876543333333456665432  2333443321  11  12246


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +.|++|.|+|   +++++++|+++|+++..+|.....+...++|++|||||+|||.+..
T Consensus        70 ~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          70 LHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            8899999986   4578899999999987776655434555789999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.61  E-value=1.7e-14  Score=120.17  Aligned_cols=112  Identities=17%  Similarity=0.231  Sum_probs=83.8

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+|.||.|.|+|++++.        +||+++|||++..+.   +   ..+|+..+. . ++.+.+....        ++
T Consensus         4 ~~~l~~v~l~v~d~~~s~--------~FY~~vLG~~~~~~~---~---~~~~l~~~~-~-~~~i~l~~~~--------~~   59 (124)
T cd08361           4 LQDIAYVRLGTRDLAGAT--------RFATDILGLQVAERT---A---KATYFRSDA-R-DHTLVYIEGD--------PA   59 (124)
T ss_pred             EEEeeEEEEeeCCHHHHH--------HHHHhccCceeccCC---C---CeEEEEcCC-c-cEEEEEEeCC--------Cc
Confidence            458999999999999999        999999999986432   1   245666532 2 4445553211        35


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCcccc--CCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ..|++|.|+|   +++++++|+++|+++...+....  .+...++||+|||||+||+..+.
T Consensus        60 ~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          60 EQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             eEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            6789999986   99999999999999876553221  23456789999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.61  E-value=2e-14  Score=120.98  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=83.2

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc-eEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      |+.+++|+.|.|+|+++++        +||+++|||++..+....... ....++..+    ...+++......    ..
T Consensus         1 mi~~i~hv~l~V~dl~~s~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~----~~   64 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTT--------AFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGDSL----QE   64 (131)
T ss_pred             CcccEeEEEEEeCCHHHHH--------HHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCCCC----CC
Confidence            4568999999999999999        999999999876543211000 001122222    124555422111    12


Q ss_pred             CCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          190 TGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .++.|++|.|+  |+++++++|+++|+++.... +...+.++.+||+|||||.|||....
T Consensus        65 ~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          65 RTYNHIAFKISDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             CCceEEEEEcCHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            47899999998  79999999999999886432 33334567999999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.61  E-value=3.2e-14  Score=119.46  Aligned_cols=116  Identities=20%  Similarity=0.278  Sum_probs=86.1

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHH
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  333 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd  333 (384)
                      +||.|.|+|++++++||+++||+++......+ +.....++..+.  .++.+.+....      ..++..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            58999999999999999999999987554332 222334444332  23445554321      1468899999999875


Q ss_pred             ---HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          334 ---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       334 ---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                         +++++++++|+++..+|...+.+..++++|+|||||.|||.+...
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               688999999999988776655443578899999999999998663

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.61  E-value=1.5e-14  Score=119.90  Aligned_cols=119  Identities=29%  Similarity=0.519  Sum_probs=88.0

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC-CCceEEEEEeeCCCCccEEEEEEecCCC-CC-----Cc
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPEDSHFVVELTYNYGV-DK-----YD  187 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~-----~~  187 (384)
                      ++||.|.|+|+++++        +||+++|||+.......+ +.....+++..+    ...+++...... ..     ..
T Consensus         1 ~~hv~l~v~d~~~~~--------~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~   68 (128)
T cd07249           1 IDHIGIAVPDLEAAI--------KFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEK   68 (128)
T ss_pred             CcEEEEEeCCHHHHH--------HHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhc
Confidence            579999999999999        999999999987654332 233456677643    445666543221 11     13


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCC--CCEEEEee
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLE  245 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPd--G~~iel~~  245 (384)
                      .+.|..|++|.|+|+++++++++++|+++..+|.....++..+.++.|||  |+.|||+|
T Consensus        69 ~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          69 RGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            46789999999999999999999999999887764444555555555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=1e-14  Score=117.55  Aligned_cols=113  Identities=28%  Similarity=0.364  Sum_probs=82.7

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC-CcCCCCce
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFG  193 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~  193 (384)
                      |+|++|.|+|+++++        +||+++|||++..+...+   ...+++..++.   ..+++........ ...+.+..
T Consensus         1 i~Hi~l~v~d~~~~~--------~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~   66 (114)
T cd07245           1 LDHVALRVPDLEASR--------AFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDD   66 (114)
T ss_pred             CCeEEEecCCHHHHH--------HHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccc
Confidence            589999999999999        999999999986543222   12345554432   2445543322211 12345788


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEE
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel  243 (384)
                      |++|.|+|+++++++++++|+++..++..  ..+.+.++++||||++|||
T Consensus        67 ~~~~~v~d~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          67 HIAFRVDDLDAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             eEEEEeCCHHHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99999999999999999999999877654  2344578999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.60  E-value=2.2e-14  Score=121.93  Aligned_cols=116  Identities=22%  Similarity=0.290  Sum_probs=85.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .++.|+.|.|+|++++++||+++|||++..+.    .  ...++..+    +..+.+.............+..|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKG----R--KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeec----C--eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            36899999999999999999999999986432    1  12233322    34444433222211222356789999997


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        |+++++++++++|+++..+|...+++ ++.+||+|||||.|||.+..
T Consensus        73 ~~dv~~~~~~l~~~G~~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         73 EEDFDHWYQRLKENDVNILPGRERDERD-KKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHHHHCCceEcCCccccCCC-ceEEEEECCCCCEEEEEeCC
Confidence              99999999999999988776655543 58999999999999998743

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.60  E-value=3.2e-14  Score=116.20  Aligned_cols=111  Identities=27%  Similarity=0.431  Sum_probs=85.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ++++|+.|.|+|+++++        +||+++|||++....+      ..+|+..+. ..++.+.+...       ...+.
T Consensus         1 ~~l~hv~l~v~d~~~~~--------~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~   58 (117)
T cd07240           1 RRIAYAELEVPDLERAL--------EFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGV   58 (117)
T ss_pred             CceeEEEEecCCHHHHH--------HHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCc
Confidence            48999999999999999        9999999999876531      245665432 23445555432       12478


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .|++|.|+   |+++++++|+++|+++...+...+ ++.+.+|+.||+||++|++..
T Consensus        59 ~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          59 DALGFEVASEEDLEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             eeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEc
Confidence            89999998   588899999999999988765333 355678999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=5.4e-14  Score=116.23  Aligned_cols=115  Identities=24%  Similarity=0.262  Sum_probs=83.6

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc----cCCCceeEEEEEcCC
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY----DKGNGYAQIAIGTDD  331 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~----~~g~g~~hiaf~VdD  331 (384)
                      -.|.|.|++++++||+++||+++......+++......+..+    ...+.+.........    ...++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999997665333333333334432    223333322211111    233567899999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +++++++++++|+++..+|...+++ .+.++++|||||.|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            9999999999999999988877765 478999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.59  E-value=1.8e-14  Score=121.24  Aligned_cols=114  Identities=23%  Similarity=0.370  Sum_probs=82.1

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceE
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  194 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  194 (384)
                      |+||.|.|+|+++++        +||+++|||++....    .  ..+++..+    ...+.+......+......+..|
T Consensus         1 i~HV~l~V~Dl~~a~--------~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~h   62 (131)
T cd08363           1 INHMTFSVSNLDKSI--------SFYKHVFMEKLLVLG----E--KTAYFTIG----GTWLALNEEPDIPRNEIRQSYTH   62 (131)
T ss_pred             CceEEEEECCHHHHH--------HHHHHhhCCEEeccC----C--ccceEeeC----ceEEEEEccCCCCcCCcCccceE
Confidence            689999999999999        999999999986432    1  12344443    23444433222222222357889


Q ss_pred             EEEEECC--HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          195 FGIAVED--VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       195 i~~~v~D--v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ++|.|++  +++++++|+++|+++..++.... +..+.+|++|||||+|||.+..
T Consensus        63 iaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~-~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          63 IAFTIEDSEFDAFYTRLKEAGVNILPGRKRDV-RDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             EEEEecHHHHHHHHHHHHHcCCcccCCCcccc-CcceEEEEECCCCCEEEEecCc
Confidence            9999984  99999999999999875543332 3456889999999999998753

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=3.5e-14  Score=116.85  Aligned_cols=116  Identities=22%  Similarity=0.360  Sum_probs=83.8

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC---ccccCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~---~~~~~g~g~~hiaf~  328 (384)
                      +++|+.|.|.|++++++||+++|||+........  .+..  +..+    ...+++......   .......+..|++|.
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~--~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~   74 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKA--LRFG----SQKINLHPVGGEFEPAAGSPGPGSDDLCLI   74 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceE--EEeC----CEEEEEecCCCccCcCccCCCCCCceEEEE
Confidence            5899999999999999999999999987543221  2222  2222    234555432211   112234678999999


Q ss_pred             cCC-HHHHHHHHHHCCCeEecCCccCCC--CCceEEEEECCCCCeEEEEe
Q 016689          329 TDD-VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       329 VdD-vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElve  375 (384)
                      +++ +++++++++++|+++..+|...++  +.++.+||+|||||.||+.+
T Consensus        75 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          75 TEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             ecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            975 999999999999999887765432  22478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.59  E-value=6.6e-14  Score=117.64  Aligned_cols=120  Identities=27%  Similarity=0.435  Sum_probs=86.5

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      +|+|+.|.|+|+++++        +||+++|||++......    ...+|+..+. ..+..+.+.............++.
T Consensus         1 ~i~hv~l~v~D~~~s~--------~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~   67 (134)
T cd08348           1 RLSHVVLYVRDLEAMV--------RFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLN   67 (134)
T ss_pred             CeeEEEEEecCHHHHH--------HHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCCCCCCCCCCce
Confidence            5899999999999999        99999999998654321    1355665431 223456665443322122346889


Q ss_pred             EEEEEECCHH---HHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          194 HFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       194 hi~~~v~Dv~---~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      |++|.|+|++   +++++|+++|+++...+.   .+..+.+|++|||||+|||+...+.
T Consensus        68 h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~---~~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          68 HIAFEVDSLDDLRDLYERLRAAGITPVWPVD---HGNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCCccccCC---CCceeEEEEECCCCCEEEEEEcCCC
Confidence            9999999865   578999999999876542   2345778999999999999987653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PRK06724 hypothetical protein; Provisional

Probab=99.59  E-value=3.8e-14  Score=118.91  Aligned_cols=112  Identities=18%  Similarity=0.255  Sum_probs=78.5

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhcc---CCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~L---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      |..+++||.|.|+|+++|+        +||+++|   ||+.....         .+ ..+    ...+.+......  ..
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~--------~FY~~vlg~lg~~~~~~~---------~~-~~g----~~~l~l~~~~~~--~~   59 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESI--------SFYDMLFSIIGWRKLNEV---------AY-STG----ESEIYFKEVDEE--IV   59 (128)
T ss_pred             cCcccCEEEEEeCCHHHHH--------HHHHHHHhhCCcEEeeeE---------ee-eCC----CeeEEEecCCcc--cc
Confidence            5678999999999999999        9999966   66653211         11 101    111222111010  11


Q ss_pred             CCCCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCcccc--CCCEEEEEEECCCCCEEEEeec
Q 016689          188 IGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       188 ~g~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ...|..|+||.|   +|+++++++|+++|+++..+|...+  +++.+.+||+|||||.||+...
T Consensus        60 ~~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         60 RTLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             CCCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            234788999998   6899999999999999987775543  2455788999999999999876

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=6.1e-14  Score=116.73  Aligned_cols=117  Identities=22%  Similarity=0.364  Sum_probs=86.0

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhcc---CCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC---Cc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YD  187 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~L---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~  187 (384)
                      +|+||+|.|.|+++++        +||+++|   ||++..+.+  +   ...|...   ..+..+++........   ..
T Consensus         1 ~i~Hv~i~v~d~~~~~--------~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~---~~~~~i~l~~~~~~~~~~~~~   64 (128)
T cd07242           1 GIHHVELTVRDLERSR--------AFYDWLLGLLGFEEVKEWE--D---GRSWRAG---DGGTYLVLQQADGESAGRHDR   64 (128)
T ss_pred             CCceEEEEeCCHHHHH--------HHHHHHHhhcCCEEEEeec--c---CceEEec---CCceEEEEEecccCCCccccc
Confidence            4799999999999999        9999999   999876541  1   1233322   1245666654333221   12


Q ss_pred             CCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeec
Q 016689          188 IGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       188 ~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .+.|+.|++|.|+|   +++++++|+++|+++...+...  ..++.+.+|++|||||+|||+.+
T Consensus        65 ~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          65 RNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            34678999999974   8899999999999998876542  23467788999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.58  E-value=5.5e-15  Score=121.92  Aligned_cols=120  Identities=28%  Similarity=0.320  Sum_probs=81.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeec--CCCCcEEEEEeecCCCCcceEEEEeccCCCccccC---CCceeEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRD--NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK---GNGYAQIA  326 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~---g~g~~hia  326 (384)
                      +|+||.|.|.|++++++||+++|||++.....  ..........+..+.  ....+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            47999999999999999999999999987765  122233444444432  233333332221111110   01334555


Q ss_pred             EEc---CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          327 IGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       327 f~V---dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                      +.+   +|+++++++|++.|+++..+|.....+....+||+||+||.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            555   67888999999999999988876666544566899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=3.1e-14  Score=117.49  Aligned_cols=114  Identities=18%  Similarity=0.188  Sum_probs=79.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEE--e--cCCCCCCcC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT--Y--NYGVDKYDI  188 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~--~--~~~~~~~~~  188 (384)
                      +++.|+.|.|.|+++|+        +||+++|||++....  +  . ...+ ..+     ..+.+.  +  .........
T Consensus         1 ~~~~~~~l~v~D~~~a~--------~FY~~~lG~~~~~~~--~--~-~~~~-~~~-----~~l~~~~~~~~~~~~~~~~~   61 (120)
T cd09011           1 MKFKNPLLVVKDIEKSK--------KFYEKVLGLKVVMDF--G--E-NVTF-EGG-----FALQEGYSWLEGISKADIIE   61 (120)
T ss_pred             CEEEEEEEEECCHHHHH--------HHHHHhcCCEEeecc--C--c-eEEE-ecc-----ceeccchhhhccCCcccccc
Confidence            37899999999999999        999999999986432  1  1 1122 111     111110  0  011111223


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCC-eeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~-~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +.+..|++|.|+|+++++++|+++|+ ++..+|...++ +.+.++|+|||||+|||.+.
T Consensus        62 ~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          62 KSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             cCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            34567999999999999999999986 67777766654 45788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.58  E-value=3.9e-14  Score=116.88  Aligned_cols=120  Identities=19%  Similarity=0.233  Sum_probs=83.3

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC-cEEEEEeecCCCCcceEEEEeccCCCcc--ccCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-KYTIAVMGYGPEDKNAVLELTYNHGVTE--YDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~--~~~g~g~~hiaf~  328 (384)
                      .++||.|.|.|++++++||+++|||++..+....+. ....+++.......+..+++........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            378999999999999999999999998766543221 1122333322112345666654332211  1223467899999


Q ss_pred             cC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          329 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       329 Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      |+   |+++++++++++|+++..++.. .+  ++.+||+||+||.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH-FG--ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee-cc--eEEEEEECCCCCEEEeC
Confidence            97   5799999999999998754432 22  58899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4.3e-14  Score=116.62  Aligned_cols=113  Identities=13%  Similarity=0.195  Sum_probs=79.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEec----cCCCccccCCCceeEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY----NHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~----~~~~~~~~~g~g~~hiaf  327 (384)
                      ++.++.|.|.|+++|++||+++||+++....  +.  . .. +..     ...+.+..    .........+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~~--~-~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--GE--N-VT-FEG-----GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeecc--Cc--e-EE-Eec-----cceeccchhhhccCCcccccccCCceEEEE
Confidence            4678999999999999999999999985322  11  1 11 111     11111110    001111223345579999


Q ss_pred             EcCCHHHHHHHHHHCCC-eEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          328 GTDDVYKTAEAIKLSGG-KITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~-~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      .|+|+++++++++++|+ ++..+|...+++ .+.++|+|||||.|||.+.
T Consensus        71 ~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            99999999999999986 788888777775 4899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=7.4e-14  Score=115.50  Aligned_cols=115  Identities=21%  Similarity=0.308  Sum_probs=80.2

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccC--------CC--ccccCCCce
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH--------GV--TEYDKGNGY  322 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~--------~~--~~~~~g~g~  322 (384)
                      +.|+.|.|+|++++++||+++|||++.....  +..+..  +..+    ...+.+....        ..  ......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4789999999999999999999999864321  112211  2111    1122221100        00  011122344


Q ss_pred             eEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          323 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       323 ~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      .|++|.|+|+++++++++++|+++..+|...+++ .+.++++|||||.||++++
T Consensus        73 ~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            6999999999999999999999998888777775 3788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=3.6e-14  Score=114.27  Aligned_cols=113  Identities=25%  Similarity=0.224  Sum_probs=80.9

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-ccCCCceeEEEEEcCC
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTDD  331 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~g~g~~hiaf~VdD  331 (384)
                      ++|+.|.|.|++++++||+++|||++..+...+. ..  .++..++   ...+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~--~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF-PG--AWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC-Cc--eEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            6899999999999999999999999865432221 11  2233222   12445543322211 1234567899999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                      +++++++++++|+++..++...++  ++.+||+||+||.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCC--ccEEEEECCCCCEEeC
Confidence            999999999999999887754233  4789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.57  E-value=7.3e-14  Score=121.41  Aligned_cols=117  Identities=15%  Similarity=0.095  Sum_probs=84.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-ccCCCceeEEEEEcC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTD  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~g~g~~hiaf~Vd  330 (384)
                      .++||.|.|+|++++.+||+++|||++..+..   ..  +.+...+. ..++.+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~--~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DR--VRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CE--EEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            37899999999999999999999999875532   11  22222211 2256677765322211 122357889999998


Q ss_pred             C---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |   +++++++|++.|+++. ++...++  ++.+||+|||||.|||+...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~-~~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVS-GIVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCcc-ccccccc--EEEEEEECCCCcEEEEEECC
Confidence            8   9999999999999864 3333333  57899999999999999855

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.57  E-value=4.4e-14  Score=118.86  Aligned_cols=114  Identities=24%  Similarity=0.280  Sum_probs=81.6

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC--
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--  330 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd--  330 (384)
                      |+||.|.|+|++++++||+++|||++.....    ..  .++..+    +..+.+......+......+..|++|.|+  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----KT--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----cc--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999864321    11  122222    24444543322211222357789999997  


Q ss_pred             CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+++++++++++|+++..++.....+ ++.+||+|||||.|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRD-RKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCc-ceEEEEECCCCCEEEEecCc
Confidence            49999999999999987655433332 58899999999999999865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.57  E-value=6.9e-14  Score=115.84  Aligned_cols=118  Identities=25%  Similarity=0.400  Sum_probs=84.8

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCC-CCcEEEEEeecCCCCcceEEEEeccCCCc-c-----ccCCCceeEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPEDKNAVLELTYNHGVT-E-----YDKGNGYAQI  325 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~-----~~~g~g~~hi  325 (384)
                      ++||.|.|.|++++++||+++|||+........ +.....+++..+    ...+++..+.... .     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 233445555542    4555655432211 1     1345788999


Q ss_pred             EEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCC---CCeEEEEe
Q 016689          326 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD---GWKSVFVD  375 (384)
Q Consensus       326 af~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPd---G~~iElve  375 (384)
                      +|.|+|+++++++++++|+++..+|...+.+ ++.+++.||+   |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAG-GKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCC-CCEEEEEecCCCceEEEEecC
Confidence            9999999999999999999999887633333 3445555554   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=2.3e-13  Score=112.42  Aligned_cols=115  Identities=21%  Similarity=0.217  Sum_probs=82.6

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC----CcCCCCce
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFG  193 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~~~g~g~~  193 (384)
                      -.|.|+|+++++        +||+++||+++......+++....+.+..+  +  ..+.+........    .....+..
T Consensus         3 p~l~v~d~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~~   70 (122)
T cd08355           3 PTLRYRDAAAAI--------DWLTDAFGFEERLVVPDDDGGVAHAELRFG--D--GGVMVGSVRDDYRASSARAGGAGTQ   70 (122)
T ss_pred             EEEEECCHHHHH--------HHHHHhcCCEEEEEEeCCCCcEEEEEEEEC--C--EEEEEecCCCcccccccccCCCceE
Confidence            478999999999        999999999997665333333334445543  1  1333332211111    12335667


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      |++|.|+|+++++++++++|+++..+|...+.| .+.++++|||||+|+|.+
T Consensus        71 ~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          71 GVYVVVDDVDAHYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             EEEEEECCHHHHHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            899999999999999999999999888766544 567789999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.9e-13  Score=112.32  Aligned_cols=115  Identities=25%  Similarity=0.240  Sum_probs=85.1

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--cccCCCceeEEEEEcCCHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGTDDVY  333 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~~~~g~g~~hiaf~VdDvd  333 (384)
                      ..|.|.|++++++||+++||+++......+++......+..+    ...+.+.......  ......+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            468899999999999999999998665544444444444432    2345554321110  1123456789999999999


Q ss_pred             HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          334 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       334 ~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      ++++++.+.|+++..+|...+++ .+.++++|||||.|+|.+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCccccccc-ceEEEEECCCCCEEEEec
Confidence            99999999999999888766665 489999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.56  E-value=8.9e-14  Score=114.29  Aligned_cols=113  Identities=26%  Similarity=0.339  Sum_probs=82.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .+|+|+.|.|+|+++++        +||+++|||+......    .  .+++..+. ..++.+.+...       ..+++
T Consensus         2 ~~i~hv~l~v~d~~~s~--------~FY~~~lG~~~~~~~~----~--~~~~~~~~-~~~~~~~~~~~-------~~~~~   59 (120)
T cd08362           2 TALRGVGLGVPDLAAAA--------AFYREVWGLSVVAEDD----G--IVYLRATG-SEHHILRLRRS-------DRNRL   59 (120)
T ss_pred             ceeeEEEEecCCHHHHH--------HHHHhCcCcEEEEecC----C--EEEEECCC-CccEEEEeccC-------CCCCC
Confidence            47999999999999999        9999999999864321    2  34554322 22334443221       12367


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeeeeCCcccc-CCCEEEEEEECCCCCEEEEeecC
Q 016689          193 GHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       193 ~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~-~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .|++|.++   |+++++++|+++|+++..+|.... .++.+.++++||+||+|||+...
T Consensus        60 ~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          60 DVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            89999994   689999999999999887664332 23466789999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.8e-13  Score=113.89  Aligned_cols=117  Identities=23%  Similarity=0.288  Sum_probs=84.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhh---CCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc---ccCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAF---GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE---YDKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~---~~~g~g~~hi  325 (384)
                      +++||.|.|.|++++++||+++|   ||++..+..  + ...+...     ..+..+.+........   ...+.+..|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-----DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-----CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   999876541  1 1122211     1145566654332211   1234678899


Q ss_pred             EEEcC---CHHHHHHHHHHCCCeEecCCccC--CCCCceEEEEECCCCCeEEEEec
Q 016689          326 AIGTD---DVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       326 af~Vd---Dvd~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +|.|+   |+++++++++++|+++..++...  ....++++||+|||||.|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99996   58899999999999998877642  12235899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.56  E-value=8.9e-14  Score=116.68  Aligned_cols=112  Identities=19%  Similarity=0.214  Sum_probs=77.6

Q ss_pred             CCceeeeeecCChHHHHHHHHHhh---CCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAF---GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      ..++||.|.|+|+++|++||+++|   |++.........+              ...+.+.....  ......+..|+||
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g--------------~~~l~l~~~~~--~~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTG--------------ESEIYFKEVDE--EIVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCC--------------CeeEEEecCCc--cccCCCCceeEEE
Confidence            469999999999999999999966   6665321111111              11122211111  0112346789999


Q ss_pred             Ec---CCHHHHHHHHHHCCCeEecCCccCCC-CCc-eEEEEECCCCCeEEEEecCc
Q 016689          328 GT---DDVYKTAEAIKLSGGKITREPGPLPG-INT-KITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~V---dDvd~~~~~l~~~G~~i~~~p~~~~~-~~~-~~~~~~DPdG~~iElve~~~  378 (384)
                      .|   +|++++.++++++|+++..+|...+. +.+ +.+||+|||||.||++..++
T Consensus        70 ~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~~  125 (128)
T PRK06724         70 QAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTPN  125 (128)
T ss_pred             ecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCCC
Confidence            98   78999999999999999888765442 223 67899999999999987643

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.56  E-value=1.2e-13  Score=118.38  Aligned_cols=114  Identities=16%  Similarity=0.292  Sum_probs=83.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .++.||.|.|.|++++++||+++|||++.....   .  ...++..+..  .+.+.+...       ..+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---D--QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---C--eEEEEECCCC--cceEEEccC-------CCCceEEEEEECC
Confidence            468999999999999999999999999864321   1  1234444322  344454321       1357889999999


Q ss_pred             CHHHHH---HHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          331 DVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       331 Dvd~~~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      |++++.   ++|+++|+++..+|.....+..+++||+||+||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            887775   899999999887765433332467899999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.56  E-value=1.6e-13  Score=112.24  Aligned_cols=109  Identities=21%  Similarity=0.282  Sum_probs=79.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .+++|+.|.|+|+++++        +||++ |||++..+.  +    ..+|+..+. ..++.+.+...       ..+++
T Consensus         2 ~~l~hv~l~v~Dl~~s~--------~FY~~-lGl~~~~~~--~----~~~~~~~~~-~~~~~~~~~~~-------~~~~~   58 (113)
T cd07267           2 TDIAHVRFEHPDLDKAE--------RFLTD-FGLEVAART--D----DELYYRGYG-TDPFVYVARKG-------EKARF   58 (113)
T ss_pred             cEEEEEEEccCCHHHHH--------HHHHH-cCCEEEEec--C----CeEEEecCC-CccEEEEcccC-------CcCcc
Confidence            58999999999999999        99999 999986442  1    134554321 22323222111       12578


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .|++|.|+|.+++.+.++++|..+...+. .+ ++.+.+||+|||||.|||+..
T Consensus        59 ~~~af~v~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          59 VGAAFEAASRADLEKAAALPGASVIDDLE-AP-GGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             cEEEEEECCHHHHHHHHHcCCCeeecCCC-CC-CCceEEEEECCCCCEEEEEec
Confidence            89999999999999999999998775432 22 345688999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.55  E-value=1.3e-14  Score=133.74  Aligned_cols=253  Identities=21%  Similarity=0.349  Sum_probs=166.5

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ceEEEEEeeCCCCccEEEEEEecCCC-----CC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGV-----DK  185 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~-----~~  185 (384)
                      .+++||.+.|+|...+.        +||+..|||+....++...+  .+...-+..|  +.-+.+.-.++++-     .-
T Consensus        16 l~f~Hi~F~vgna~q~A--------~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l   85 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAA--------RWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHL   85 (381)
T ss_pred             eeeeEEEEEecCcHHHH--------HHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhh
Confidence            58999999999999999        99999999998765433221  1111111111  11111111111111     11


Q ss_pred             CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecCCC--------------
Q 016689          186 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT--------------  249 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~~~--------------  249 (384)
                      ...|.|..-+||+|+|++++...++++|+++..+|.....  |..+++.+..+-.....++++...              
T Consensus        86 ~~HgdgvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~  165 (381)
T KOG0638|consen   86 VKHGDGVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSD  165 (381)
T ss_pred             hhcccchhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccc
Confidence            2356678889999999999999999999999998876653  556777777776666666666531              


Q ss_pred             ---C-------CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCCCc-----EEEEEeecCCCCcceEEEEeccCC
Q 016689          250 ---P-------EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYK-----YTIAVMGYGPEDKNAVLELTYNHG  312 (384)
Q Consensus       250 ---~-------~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~lel~~~~~  312 (384)
                         |       .+++|++..++  .++.+.+||.+.|||.-.+..+++.-.     .+.+.+...  +....+.+.++..
T Consensus       166 ~~fp~l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~--~esi~mpinEp~~  243 (381)
T KOG0638|consen  166 ALFPKLPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANY--EESIKMPINEPAP  243 (381)
T ss_pred             cccCCCCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcC--CccEEEeccCCCC
Confidence               1       25899999999  688999999999999988766543211     011112211  1123333433221


Q ss_pred             -Cc---------cccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccC--------C--CC----------CceEEE
Q 016689          313 -VT---------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--------P--GI----------NTKITA  362 (384)
Q Consensus       313 -~~---------~~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~--------~--~~----------~~~~~~  362 (384)
                       ..         .+..|+|++||++.++||-.+.+.++++|+++..+|...        .  ..          .-.+..
T Consensus       244 G~k~ksQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILv  323 (381)
T KOG0638|consen  244 GKKKKSQIQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILV  323 (381)
T ss_pred             CCccHHHHHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEE
Confidence             11         135688999999999999999999999999999888431        0  00          012344


Q ss_pred             EECCCCCeEEEEecC
Q 016689          363 CLDPDGWKSVFVDNL  377 (384)
Q Consensus       363 ~~DPdG~~iElve~~  377 (384)
                      =.|-.|.++.|+..+
T Consensus       324 D~De~gyLLQIFTKp  338 (381)
T KOG0638|consen  324 DFDENGYLLQIFTKP  338 (381)
T ss_pred             ecCCCcEEeeeeccc
Confidence            577888888887743

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.55  E-value=1.4e-13  Score=120.64  Aligned_cols=120  Identities=20%  Similarity=0.174  Sum_probs=84.4

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++|+.|.|+|++++++||+++|||++......+.+.....++....  ....+.+....    ....+++.|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~----~~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRDP----AGARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecCC----CCCCCCceEEEEECC
Confidence            468999999999999999999999999876543332222233443321  13334443211    112346789999998


Q ss_pred             C---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |   +++++++++++|+++..+|.........++|++|||||.|||++.
T Consensus        79 ~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            5   557889999999998777765443334578999999999999997

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.55  E-value=9.2e-14  Score=114.81  Aligned_cols=112  Identities=19%  Similarity=0.197  Sum_probs=81.1

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++|+.|.|+|++++.+||+++|||++..+.+    .  .+++...+....+.+.+...       ..++..|++|.|+
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~v~   71 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWRAS   71 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCCCccEEEEeeC-------CCCceEEEEEEcC
Confidence            468999999999999999999999999875432    1  22343222222444555431       2357899999996


Q ss_pred             ---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 ---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                         |++++.++++++|+++...+.....  ++.+||+|||||.||++...
T Consensus        72 ~~~~v~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          72 SPEALERRVAALEASGLGIGWIEGDPGH--GKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             CHHHHHHHHHHHHHcCCccccccCCCCC--cceEEEECCCCCEEEEEEec
Confidence               6889999999999987543332222  46789999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=3.7e-13  Score=110.59  Aligned_cols=116  Identities=22%  Similarity=0.205  Sum_probs=85.3

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC--CCCcCCCCceEE
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKYDIGTGFGHF  195 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~~~g~g~~hi  195 (384)
                      ..|.|.|+++++        +||+++||+++......+++.+..+.+..+.    ..+.+......  .....+.+..|+
T Consensus         5 ~~l~v~d~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd07246           5 PYLIVRDAAAAI--------DFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSL   72 (122)
T ss_pred             EEEEECCHHHHH--------HHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEE
Confidence            468999999999        9999999999987765444544455555431    23444432111  011233467799


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          196 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       196 ~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +|.|+|++++++++.++|+++..+|.... .+.+.++++||||++|+|.+.
T Consensus        73 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          73 HLYVEDVDATFARAVAAGATSVMPPADQF-WGDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             EEEeCCHHHHHHHHHHCCCeEecCccccc-ccceEEEEECCCCCEEEEecC
Confidence            99999999999999999999988876554 456788999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.55  E-value=1.5e-13  Score=114.04  Aligned_cols=111  Identities=14%  Similarity=0.187  Sum_probs=80.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      ++.|+.|.|.|+++|++||+++|||++....    +.+..+.+.  +   +..+.+...      ....+..|++|.|+ 
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~------~~~~~~~h~a~~v~~   68 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQP------DGEIPPQHYAFLVSE   68 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecC------CCCCCcceEEEEeCH
Confidence            5789999999999999999999999986422    122222222  1   344555432      11234579999886 


Q ss_pred             -CHHHHHHHHHHCCCeEecCCccCC------CCCceEEEEECCCCCeEEEEecC
Q 016689          331 -DVYKTAEAIKLSGGKITREPGPLP------GINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 -Dvd~~~~~l~~~G~~i~~~p~~~~------~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       |+++++++++++|+++..+|...+      ...++.+||+|||||.|||++.+
T Consensus        69 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          69 EEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence             699999999999999877665321      12258999999999999999863

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.54  E-value=1.2e-13  Score=113.89  Aligned_cols=114  Identities=25%  Similarity=0.261  Sum_probs=82.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V-  329 (384)
                      .++.|+.|.|+|++++++||+++|||++.....    .+  +++........+.+.+...       ..++..|++|.| 
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCCceEEEEEeeC-------CCCceeEEEEECC
Confidence            368999999999999999999999999864321    12  2233211112334444321       235788999999 


Q ss_pred             --CCHHHHHHHHHHCCCeEecCCcc-CCCCCceEEEEECCCCCeEEEEecCc
Q 016689          330 --DDVYKTAEAIKLSGGKITREPGP-LPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       330 --dDvd~~~~~l~~~G~~i~~~p~~-~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                        +|+++++++++++|+++...|.. .++. ++.+|++|||||.||++...+
T Consensus        70 ~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~DPdG~~ve~~~~~~  120 (121)
T cd07266          70 SEEDLDKAEAFFQELGLPTEWVEAGEEPGQ-GRALRVEDPLGFPIEFYAEMD  120 (121)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCcCCCC-ccEEEEECCCCCEEEEEeccc
Confidence              57899999999999998766443 3443 478999999999999987543

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.54  E-value=1.7e-14  Score=120.51  Aligned_cols=124  Identities=34%  Similarity=0.551  Sum_probs=88.4

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCC-------C--------CccEEEEE
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGP-------E--------DSHFVVEL  177 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~-------~--------~~~~~lel  177 (384)
                      .++.|..++|.|+.+++        .||++++||.+..+.++++..+...|+++..       .        ..+..+||
T Consensus        21 ~~~~~t~~rvkd~~~Sl--------~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~EL   92 (170)
T KOG2944|consen   21 YLLQQTMLRVKDPTGSL--------KFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLEL   92 (170)
T ss_pred             hhhhhceeecccchhhh--------hhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceee
Confidence            35678888888888888        8888888888776655554444444443310       0        01346788


Q ss_pred             EecCCCCC-----Cc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          178 TYNYGVDK-----YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       178 ~~~~~~~~-----~~----~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +.+.+...     +.    .+.|++||||.|+|+++++++|+++|+++...+.+  +-...++|+.|||||+||+...
T Consensus        93 thn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~d--Gk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen   93 THNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKD--GKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             ecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCC--ccccceeEEECCCCCeEEEeec
Confidence            87766432     21    22599999999999999999999999998776542  2234689999999999999765

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.54  E-value=2.2e-13  Score=114.57  Aligned_cols=116  Identities=17%  Similarity=0.191  Sum_probs=80.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC--cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      .++||.|.|+|++++++||+++||+++..+......  ....++. .+    ...+.+.....    ...++..|++|.|
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~----~~~i~l~~~~~----~~~~~~~Hiaf~v   74 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-IG----GLWIAIMEGDS----LQERTYNHIAFKI   74 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-cC----CeEEEEecCCC----CCCCCceEEEEEc
Confidence            689999999999999999999999987544321110  0011111 11    23455543211    1224678999999


Q ss_pred             C--CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 D--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 d--Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +  |++++.++|+++|+++..+. +...+.++.+||+|||||.|||....
T Consensus        75 ~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          75 SDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             CHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            7  79999999999999876432 22332368999999999999998643

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=2.6e-13  Score=111.43  Aligned_cols=112  Identities=20%  Similarity=0.182  Sum_probs=79.6

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc-c---ccCCCceeEEEEEcC
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---YDKGNGYAQIAIGTD  330 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~---~~~g~g~~hiaf~Vd  330 (384)
                      +..|.|.|+++|++||+++|||++....    ..+.  .+..+..  ...+.+....... +   ........|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~~--~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWYV--SLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcEE--EEecCCC--ceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            5689999999999999999999987431    1122  2322211  2444443211110 0   111223359999999


Q ss_pred             CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       331 Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      |+++++++++++|+++..+|...+++ .+.++++|||||.|||+|
T Consensus        76 did~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            99999999999999988888776664 488999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.53  E-value=1.8e-13  Score=113.08  Aligned_cols=112  Identities=13%  Similarity=0.122  Sum_probs=81.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      ++.||.|.|+|+++|++||+++|||++..+..   ...  +++..+.  .++.+.+...       ..++..|++|.|+ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~--~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DGA--LYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---CCe--EEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            58899999999999999999999999864421   112  2333322  2455555432       1246789999996 


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccC--CCCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        |+++++++|+++|+++...|.+.  ..+.++.+||+|||||.||++...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              58899999999999998755321  222247899999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=3e-13  Score=111.84  Aligned_cols=115  Identities=20%  Similarity=0.287  Sum_probs=78.5

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecC--------C--CC
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--------G--VD  184 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~--------~--~~  184 (384)
                      +.|+.|.|+|+++++        +||+++|||++.....  .+.|.  .+..+    ...+.+....        .  +.
T Consensus         1 ~~~~~l~v~D~~~s~--------~FY~~~lG~~~~~~~~--~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   64 (125)
T cd07264           1 FGYTIIYVEDVEKTL--------EFYERAFGFERRFLHE--SGDYG--ELETG----ETTLAFASHDLAESNLKGGFVKA   64 (125)
T ss_pred             CceEEEEEcCHHHHH--------HHHHHhhCCeEEeecC--CCcEE--EecCC----cEEEEEEcccccccccccCccCC
Confidence            479999999999999        9999999999864321  22221  12111    1111111100        0  01


Q ss_pred             CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          185 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ......+..|++|.|+|+++++++++++|+++..+|...++| .+.++++|||||.||++++
T Consensus        65 ~~~~~~~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          65 DPAQPPAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             ccccCCCcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            111122345899999999999999999999998887666544 4578899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=2.8e-13  Score=111.22  Aligned_cols=111  Identities=19%  Similarity=0.220  Sum_probs=79.3

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC--C---CCcCCCC
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--D---KYDIGTG  191 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~---~~~~g~g  191 (384)
                      ++.|.|+|+++++        +||+++|||++....    ..  .+.+..+  +....+.+......  +   ....+.+
T Consensus         4 ~~~l~v~D~~~s~--------~FY~~~lG~~~~~~~----~~--~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~   67 (119)
T cd08359           4 YPVIVTDDLAETA--------DFYVRHFGFTVVFDS----DW--YVSLRSP--DGGVELAFMLPGHETVPAAQYQFQGQG   67 (119)
T ss_pred             eeEEEECCHHHHH--------HHHHHhhCcEEEecc----Cc--EEEEecC--CCceEEEEccCCCCCCcchhcccCCce
Confidence            6789999999999        999999999987542    11  2334332  11234444322111  1   1122334


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          192 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       192 ~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      . |++|.|+|+++++++++++|+++..+|...+. +.+.++++|||||.|||+|
T Consensus        68 ~-~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          68 L-ILNFEVDDVDAEYERLKAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             E-EEEEEECCHHHHHHHHHhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            4 89999999999999999999998877765554 4577889999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.53  E-value=1.5e-13  Score=114.38  Aligned_cols=110  Identities=16%  Similarity=0.204  Sum_probs=81.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .++.||.|.|+|++++.+||+++|||++..+.  +  .  ..++..+.  .++.+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~--~--~--~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERT--A--K--ATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCC--C--C--eEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            36899999999999999999999999986432  1  1  23344432  2444555321        135679999997


Q ss_pred             C---HHHHHHHHHHCCCeEecCCccC---CCCCceEEEEECCCCCeEEEEecC
Q 016689          331 D---VYKTAEAIKLSGGKITREPGPL---PGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~i~~~p~~~---~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |   +++++++++++|+++..++...   .++ ++++||+|||||.||++..+
T Consensus        69 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATELEQYGHEVRRGTAEECELRKV-KAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCHHHhhcCCc-ceEEEEECcCCCEEEEEEee
Confidence            5   9999999999999987765321   222 46789999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.52  E-value=4.3e-13  Score=112.69  Aligned_cols=119  Identities=18%  Similarity=0.222  Sum_probs=83.3

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      +++||.|.|+|++++++||+++|||++......  .  .+.++..+ ......+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRD-PDEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEec-CCCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999998654321  1  22333332 112445555543222111234578899999987


Q ss_pred             HH---HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          332 VY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 vd---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ++   ++++++.++|+++..++. .++  ++.+|++||+||.|||+...+
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~~~--~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-HGN--AWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-CCc--eeEEEEECCCCCEEEEEEcCC
Confidence            65   578999999998876542 232  478999999999999998653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.52  E-value=2e-13  Score=112.88  Aligned_cols=109  Identities=29%  Similarity=0.482  Sum_probs=78.7

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      ++.|+.|.|+|+++++        +||+++|||++....+  +    .+++..+  .  ..+.+......   ....+..
T Consensus         1 ~i~hv~l~v~d~~~~~--------~FY~~vLG~~~~~~~~--~----~~~~~~~--~--~~~~l~~~~~~---~~~~~~~   59 (121)
T cd07244           1 GINHITLAVSDLERSV--------AFYVDLLGFKLHVRWD--K----GAYLEAG--D--LWLCLSVDANV---GPAKDYT   59 (121)
T ss_pred             CcceEEEEECCHHHHH--------HHHHHhcCCEEEEecC--C----ceEEecC--C--EEEEEecCCCC---CCCCCee
Confidence            4789999999999999        9999999999865432  1    2344432  1  22333221111   1235788


Q ss_pred             EEEEEE--CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          194 HFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       194 hi~~~v--~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      |++|.+  +|+++++++|+++|+++..++..    ....+||+|||||+|||.+..
T Consensus        60 hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          60 HYAFSVSEEDFASLKEKLRQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             eEEEEeCHHHHHHHHHHHHHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence            999998  57999999999999998654432    235789999999999998753

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3.3e-13  Score=110.98  Aligned_cols=113  Identities=28%  Similarity=0.386  Sum_probs=80.8

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC------CCcC
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD------KYDI  188 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~------~~~~  188 (384)
                      +.||+|.|.|+++++        +||+++|||++..+   +++.  .+++..+..   ..+.+.......      ....
T Consensus         1 ~~~~~l~v~d~~~s~--------~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~   64 (122)
T cd08354           1 ILETALYVDDLEAAE--------AFYEDVLGLELMLK---EDRR--LAFFWVGGR---GMLLLFDPGATSTPGGEIPPHG   64 (122)
T ss_pred             CeEEEEEeCCHHHHH--------HHHHhccCCEEeec---CCCc--eEEEEcCCC---cEEEEEecCCcccccCCCCCCC
Confidence            478999999999999        99999999998754   2222  455555432   233333221110      1122


Q ss_pred             CCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          189 GTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       189 g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ..+..|++|.++  |++++++++.++|+++...+.  ..++.+.+|++||||++||+++
T Consensus        65 ~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          65 GSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQ--WPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             CCCccEEEEEcCHHHHHHHHHHHHhcCCceecccc--CCCCeeEEEEECCCCCEEEEec
Confidence            357889999984  799999999999999876543  2345567899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3.9e-13  Score=111.27  Aligned_cols=116  Identities=24%  Similarity=0.325  Sum_probs=84.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc-cccCCCceeEEEEEcC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EYDKGNGYAQIAIGTD  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~~~~g~g~~hiaf~Vd  330 (384)
                      +++||.|.|.|++++++||+++|||++....   + .  ...+..+.  ....+.+....... ......+..|++|.|+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            5789999999999999999999999997552   1 1  23344322  24556665533221 1223457889999996


Q ss_pred             ---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          331 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       331 ---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                         ++++++++++++|+++.. +...+.  ++.+||+|||||.|||.....
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          74 SRADLAAALRRLIELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CHHHHHHHHHHHHHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence               589999999999998754 333333  478999999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.51  E-value=2.1e-13  Score=110.84  Aligned_cols=109  Identities=24%  Similarity=0.399  Sum_probs=77.1

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEE
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  196 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  196 (384)
                      ||.|.|+|+++++        +||+++|||++..+.+      ..+++..+    ...+.+.......  ..+.++.|++
T Consensus         1 Hv~l~v~d~~~s~--------~Fy~~~lg~~~~~~~~------~~~~~~~~----~~~l~~~~~~~~~--~~~~~~~hia   60 (113)
T cd08345           1 HITLIVKDLNKSI--------AFYRDILGAELIYSSS------KEAYFELA----GLWICLMEEDSLQ--GPERTYTHIA   60 (113)
T ss_pred             CeeEEECCHHHHH--------HHHHHhcCCeeeeccC------ceeEEEec----CeEEEeccCCCcC--CCCCCccEEE
Confidence            8999999999999        9999999999865431      12344432    2233333221111  1235778999


Q ss_pred             EEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          197 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       197 ~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      |.|+  |+++++++++++|+++...+... .+.++.+|++|||||+||+...
T Consensus        61 f~v~~~d~~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          61 FQIQSEEFDEYTERLKALGVEMKPERPRV-QGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             EEcCHHHHHHHHHHHHHcCCccCCCcccc-CCCceEEEEECCCCCEEEEEeC
Confidence            9995  79999999999999987543222 2345688999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.51  E-value=4.6e-13  Score=108.30  Aligned_cols=109  Identities=27%  Similarity=0.360  Sum_probs=80.0

Q ss_pred             eeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHH
Q 016689          257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  336 (384)
Q Consensus       257 ~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~  336 (384)
                      .|.|+|++++++||+++|||++.....  +..+  .++..+    +..+.+......... ...+..|++|.|+|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            688999999999999999999875542  1222  334322    345555543322111 3456679999999999999


Q ss_pred             HHHHHCCCe-EecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          337 EAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       337 ~~l~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      ++++++|++ +..++...+++ .+.++++||+|+.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            999999999 66666655554 378999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=3.1e-13  Score=112.15  Aligned_cols=113  Identities=22%  Similarity=0.214  Sum_probs=77.6

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC-----Cccc--cCCCceeEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG-----VTEY--DKGNGYAQI  325 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~-----~~~~--~~g~g~~hi  325 (384)
                      +.+|.|.|.|+++|++||++ |||+.......+.  ...+..+  +   ...+.+.....     ....  ....+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            46899999999999999976 9999764332222  2222221  1   23344432110     0000  123455799


Q ss_pred             EEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          326 AIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       326 af~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +|.|+   |+++++++++++|+++..+|...++  ++.+||+|||||.||++.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99997   5889999999999999988876665  467899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=4.6e-13  Score=110.68  Aligned_cols=114  Identities=25%  Similarity=0.288  Sum_probs=80.1

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhc---cCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~---LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      +.|+.|.|+|+++|+        +||+++   |||++..+.  . +.  .+++..+.  ....+.+......... ...+
T Consensus         1 l~hv~l~v~d~~~s~--------~FY~~~f~~lg~~~~~~~--~-~~--~~~~~~~~--~~~~~~l~~~~~~~~~-~~~~   64 (123)
T cd07262           1 IDHVTLGVNDLERAR--------AFYDAVLAPLGIKRVMED--G-PG--AVGYGKGG--GGPDFWVTKPFDGEPA-TAGN   64 (123)
T ss_pred             CcEEEEecCcHHHHH--------HHHHHHHhhcCceEEeec--C-Cc--eeEeccCC--CCceEEEeccccCCCC-CCCC
Confidence            579999999999999        999998   699886442  1 11  23333221  2334555443221111 2234


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEe
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~  244 (384)
                      ..|++|.|+|   +++++++++++|+++..+|...+.  +..+.+|++|||||.|||+
T Consensus        65 ~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          65 GTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            5799999997   788999999999999887765543  3455789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=4.1e-13  Score=110.43  Aligned_cols=114  Identities=24%  Similarity=0.305  Sum_probs=79.2

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc------cccCCCceeEEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT------EYDKGNGYAQIA  326 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~------~~~~g~g~~hia  326 (384)
                      +.+|.|.|.|++++++||+++|||++..+   ++..+  .++..+..   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998753   12222  33333321   223332211110      111234778999


Q ss_pred             EEc--CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          327 IGT--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       327 f~V--dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |.|  +|++++++++.++|+++..++. .+++ ++.+||+|||||.||++++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~-~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRG-GRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCC-eeEEEEECCCCCEEEEecC
Confidence            998  5899999999999999876554 2322 5889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.51  E-value=6.2e-13  Score=109.64  Aligned_cols=120  Identities=26%  Similarity=0.329  Sum_probs=90.0

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      +..+.|..|.|.|++++++||+++|||+.....+..+..+..+.... ... ...+.-..     ...+++..+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~-~~~-gG~l~~~~-----~~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADG-AGA-GGGLMARP-----GSPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCC-ccc-cceeccCC-----cCCCCCCCEEEEEec
Confidence            46789999999999999999999999998765444334443332221 111 22221111     122235668999999


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|++++.+++.++|++++.++.+.|++ ++++.|.||+||.|.|.+..
T Consensus        80 ~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            999999999999999999999988864 69999999999999998754

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.50  E-value=4.9e-13  Score=109.14  Aligned_cols=111  Identities=23%  Similarity=0.349  Sum_probs=83.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      +++|+.|.|.|++++++||+++|||++..+..    ..  .++..+. ..+..+.+...       ...+..|++|.|+ 
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~~   67 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GS--VYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVAS   67 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC----Ce--EEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcCC
Confidence            58999999999999999999999999875431    12  2333321 12444544432       1246789999997 


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        +++++.++++++|+++...|...+++ ++.+||+||+||.||++...
T Consensus        68 ~~~v~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          68 EEDLEALAAHLEAAGVAPEEASDPEPGV-GRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHHHHcCCceEEcCccCCCC-ceEEEEECCCCCEEEEEEcc
Confidence              68899999999999998877644544 58899999999999998754

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=5.5e-13  Score=108.71  Aligned_cols=108  Identities=28%  Similarity=0.354  Sum_probs=78.7

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-ccCCCceeEEEEEcCC---
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTDD---  331 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~g~g~~hiaf~VdD---  331 (384)
                      +.|.|.|+++|++||+++||+++....    ..+..+...  +   ...+.+........ .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            678999999999999999999976432    223332222  1   23445544332211 1223467899999975   


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      +++++++++++|+++..+|...++  ++.++|+|||||.||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            888999999999999988877666  46789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=7e-13  Score=107.81  Aligned_cols=110  Identities=21%  Similarity=0.238  Sum_probs=79.7

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEE
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  196 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  196 (384)
                      +..|.|+|+++++        +||+++|||++...    .+  ..+++..+. ..++.+.+.....     .+....|++
T Consensus         3 ~~~l~v~Dl~~s~--------~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~   62 (112)
T cd07238           3 VPNLPVADPEAAA--------AFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLS   62 (112)
T ss_pred             cceEecCCHHHHH--------HHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEE
Confidence            3578999999999        99999999998532    11  234444322 2234455442211     123456999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          197 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       197 ~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      |.|+|+++++++|+++|+++..+|....+ +.+.+|+.|||||+|++++++
T Consensus        63 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~~  112 (112)
T cd07238          63 IEVDDVDAALARAVAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTHR  112 (112)
T ss_pred             EEeCCHHHHHHHHHhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999999887765543 446779999999999999763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=8.4e-13  Score=107.34  Aligned_cols=108  Identities=20%  Similarity=0.233  Sum_probs=79.1

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  335 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~  335 (384)
                      ..|.|+|++++++||+++|||+....    .+ . ...+.... ..+..+.+.....     .+....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            47889999999999999999998532    11 1 22233222 1234455543211     123456999999999999


Q ss_pred             HHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          336 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       336 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      ++++++.|+++..+|...+++ .+.+|++|||||.|+|.++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHhcCCeEecCCccCCCc-eEEEEEECCCCCEEEEEEc
Confidence            999999999998887766654 3789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.49  E-value=5.3e-13  Score=107.43  Aligned_cols=108  Identities=24%  Similarity=0.285  Sum_probs=75.7

Q ss_pred             EEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEE
Q 016689          120 YRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  199 (384)
Q Consensus       120 l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v  199 (384)
                      |.|+|+++++        +||+++|||++....+    .  .+.+..+.........+....  .......+..|++|.|
T Consensus         1 l~v~d~~~a~--------~FY~~~lg~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v   64 (108)
T PF12681_consen    1 LPVSDLEAAA--------AFYEDVLGFEVVFDDP----D--YVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEV   64 (108)
T ss_dssp             EEESSHHHHH--------HHHHHTTTSEEEEEET----S--EEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEE
T ss_pred             CccCCHHHHH--------HHHHHhcCCEEEEeCC----C--eEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEE
Confidence            6899999999        9999999999987321    2  233333211101122232221  1222356888999999


Q ss_pred             CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          200 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       200 ~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      +|+++++++++++|+++..+|...++ +.+.+++.|||||+|||+
T Consensus        65 ~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   65 EDVDALYERLKELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SHHHHHHHHHHHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             cCHHHHHHHHHHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99999999999999999888776544 567899999999999986

...

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.49  E-value=4.5e-13  Score=108.82  Aligned_cols=108  Identities=21%  Similarity=0.328  Sum_probs=75.7

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc--CCH
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--DDV  332 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V--dDv  332 (384)
                      ||.|.|+|++++++||+++|||++..+.+  .  ...  +..+    ...+.+.......  ....+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~~~--~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--EAY--FELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--eeE--EEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            79999999999999999999999864431  1  111  2211    2344443322111  1234678999999  579


Q ss_pred             HHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          333 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       333 d~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      ++++++++++|+++...+...+.. ++.+|++|||||.||+..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGE-GRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCC-ceEEEEECCCCCEEEEEe
Confidence            999999999999986543222222 578999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.49  E-value=5e-13  Score=109.77  Aligned_cols=112  Identities=26%  Similarity=0.398  Sum_probs=82.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V-  329 (384)
                      .+|+|+.|.|+|++++++||+++|||+......    .+.  ++..+. ...+.+.+...       ..++..|++|.| 
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIV--YLRATG-SEHHILRLRRS-------DRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEE--EEECCC-CccEEEEeccC-------CCCCCceEEEEeC
Confidence            368999999999999999999999999864321    232  333221 22344444321       124678999999 


Q ss_pred             --CCHHHHHHHHHHCCCeEecCCccC--CCCCceEEEEECCCCCeEEEEecC
Q 016689          330 --DDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 --dDvd~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        +++++++++++++|+++..+|...  +++ ++.++|+||+||.|||+...
T Consensus        68 ~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQVAARGGTVLSEPGATDDPGG-GYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccCCCCC-ceEEEEECCCCCEEEEEecc
Confidence              578999999999999998776433  333 57899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.49  E-value=9.4e-13  Score=106.46  Aligned_cols=109  Identities=28%  Similarity=0.332  Sum_probs=79.3

Q ss_pred             EEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEE
Q 016689          119 VYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  198 (384)
Q Consensus       119 ~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~  198 (384)
                      .|.|+|+++++        +||+++|||++.....  ..  ..+++..+    +..+.+......... ...+..|++|.
T Consensus         3 ~i~v~d~~~s~--------~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~   65 (112)
T cd08349           3 VLPVSDIERSL--------AFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIE   65 (112)
T ss_pred             EEEECCHHHHH--------HHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEE
Confidence            68999999999        9999999999876542  12  24555532    345555443222211 23466689999


Q ss_pred             ECCHHHHHHHHHHcCCe-eeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          199 VEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       199 v~Dv~~~~~~l~~~G~~-~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ++|+++++++++++|++ +..++.... ++.+.++++||+|+.|||+|
T Consensus        66 ~~~~~~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          66 VEDVDALYAELKAKGADLIVYPPEDQP-WGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             eCCHHHHHHHHHHcCCcceecCccCCC-cccEEEEEECCCCCEEEecC
Confidence            99999999999999999 555555444 34567889999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=5.7e-13  Score=110.05  Aligned_cols=113  Identities=24%  Similarity=0.341  Sum_probs=74.7

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecC-C----CCCCcCCCC
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY-G----VDKYDIGTG  191 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~-~----~~~~~~g~g  191 (384)
                      ||.|.|+|+++++        +||+++|||++.....    .  .+.+..+  +....+.+.... .    ........+
T Consensus         2 Hi~l~v~Dl~~s~--------~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~   65 (125)
T cd08357           2 HLAIPVRDLEAAR--------AFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVP   65 (125)
T ss_pred             eEEEEeCCHHHHH--------HHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccC
Confidence            9999999999999        9999999999854321    1  2223221  112222222111 0    000111235


Q ss_pred             ceEEEE--EECCHHHHHHHHHHcCCeeeeCCcccc---CCCEEEEEEECCCCCEEEEee
Q 016689          192 FGHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVK---GGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       192 ~~hi~~--~v~Dv~~~~~~l~~~G~~~~~~p~~~~---~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ..|+++  .++|+++++++|+++|+++..+|....   .+..+.+|++|||||+|||..
T Consensus        66 ~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          66 VPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             CceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            667654  568999999999999999987765432   234678899999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.48  E-value=6.5e-13  Score=109.61  Aligned_cols=108  Identities=20%  Similarity=0.217  Sum_probs=76.3

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHH
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  334 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~  334 (384)
                      ...|.|.|+++|++||++ |||++..+...   .  ++.+..+    +..+.+......   .......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            357899999999999999 99998654321   2  3334332    345555543211   112234689999999999


Q ss_pred             HHHHHHHCCCeEe-------cCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          335 TAEAIKLSGGKIT-------REPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       335 ~~~~l~~~G~~i~-------~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      ++++++++|+++.       .+|...+++ .+.++|+|||||.|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            9999999999853       233333454 4889999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=1e-12  Score=108.63  Aligned_cols=114  Identities=24%  Similarity=0.235  Sum_probs=79.2

Q ss_pred             ceeeeeecCChHHHHHHHHHh---hCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          253 LCQVMLRVGDLDRAINFYKKA---FGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      +.||.|.|+|+++|++||+++   ||+++..+.  .+ .+  +.+....  ....+.+..+...... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~~--~~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-GA--VGYGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-ce--eEeccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999999   588876432  11 11  2233221  2344555443221111 223456999999


Q ss_pred             CC---HHHHHHHHHHCCCeEecCCccCCC--CCceEEEEECCCCCeEEEE
Q 016689          330 DD---VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFV  374 (384)
Q Consensus       330 dD---vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElv  374 (384)
                      ++   +++++++++++|+++..+|...++  ...+.+||+|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998887766553  2245789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.48  E-value=8.3e-13  Score=107.67  Aligned_cols=108  Identities=21%  Similarity=0.323  Sum_probs=74.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ++|+||+|.|.|+++++        +||+ .|||++..+.   +   ...+...+  ..+..+.+...       ...+.
T Consensus         1 ~~i~hv~l~v~d~~~s~--------~FY~-~lG~~~~~~~---~---~~~~~~~~--~~~~~~~~~~~-------~~~~~   56 (112)
T cd08344           1 HSIDHFALEVPDLEVAR--------RFYE-AFGLDVREEG---D---GLELRTAG--NDHRWARLLEG-------ARKRL   56 (112)
T ss_pred             CceeEEEEecCCHHHHH--------HHHH-HhCCcEEeec---C---ceEEEecC--CCceEEEeecC-------CCCce
Confidence            36999999999999999        9997 6999986432   1   12233322  22333444321       12234


Q ss_pred             eE--EEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          193 GH--FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       193 ~h--i~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .|  +.+.++|+++++++|+++|+++..++.  + +..+.+||+|||||+|||....
T Consensus        57 ~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~--~-~~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          57 AYLSFGIFEDDFAAFARHLEAAGVALAAAPP--G-ADPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             eeEEEEeEhhhHHHHHHHHHHcCCceecCCC--c-CCCCEEEEECCCCCEEEEecCC
Confidence            45  455568999999999999999876652  2 2334689999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=1.4e-12  Score=107.31  Aligned_cols=113  Identities=24%  Similarity=0.305  Sum_probs=79.5

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC--
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD--  331 (384)
                      .|+.|.|+|++++++||+++||++...+.  + . +..+... +   ....+.+..+...    ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~--~-~-~~~~~~~-~---~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR--D-D-YAKFLLE-D---PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc--C-C-eeEEEec-C---CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            58999999999999999999999875442  1 1 2222222 1   1233333332111    11578899999987  


Q ss_pred             -HHHHHHHHHHCCCeEecCCccCC-CCCceEEEEECCCCCeEEEEecCc
Q 016689          332 -VYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 -vd~~~~~l~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                       +++++++++++|+++..+|.... ++.++.+|++||+||.|||+...+
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  119 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTLG  119 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEeec
Confidence             78899999999999887664332 222478999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.48  E-value=2.5e-13  Score=109.30  Aligned_cols=108  Identities=26%  Similarity=0.365  Sum_probs=75.7

Q ss_pred             eecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHHH
Q 016689          258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAE  337 (384)
Q Consensus       258 L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~~  337 (384)
                      |.|+|++++++||+++|||++.....    .+.....+.  ........+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGF--RFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETE--EEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEecc--chhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            67999999999999999999986322    222222211  0001112222211  112235678899999999999999


Q ss_pred             HHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          338 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       338 ~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      +++++|+++..+|...+++ .+.++++|||||.|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            9999999999888876664 48999999999999985

...

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.47  E-value=1.1e-12  Score=104.32  Aligned_cols=112  Identities=32%  Similarity=0.426  Sum_probs=84.3

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEE
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  196 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  196 (384)
                      |+++.|+|+++++        +||+++|||++......  .....+++..+    +..+++...........+.+..|++
T Consensus         1 Hi~i~~~d~~~~~--------~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~   66 (112)
T cd06587           1 HVGLTVSDLEAAV--------AFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLA   66 (112)
T ss_pred             CcceeeCCHHHHH--------HHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEE
Confidence            8999999999999        99999999998766432  12245555543    3466665543322223456788999


Q ss_pred             EEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEE
Q 016689          197 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       197 ~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel  243 (384)
                      |.|+|+++++++|+++|+.+...+.. ..++...+++.||+|+.|||
T Consensus        67 ~~v~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          67 FEVDDVDAAYERLKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             EECCCHHHHHHHHHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            99999999999999999998876642 23456788999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=1.8e-12  Score=106.66  Aligned_cols=112  Identities=27%  Similarity=0.413  Sum_probs=79.0

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEE
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  195 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  195 (384)
                      .|+.|.|+|+++++        +||+++||++.....  + +  ...|...+   ....+.+......    ..++..|+
T Consensus         3 ~hv~l~v~d~~~a~--------~FY~~~lG~~~~~~~--~-~--~~~~~~~~---~~~~~~~~~~~~~----~~~~~~h~   62 (120)
T cd07254           3 FHVALNVDDLEASI--------AFYSKLFGVEPTKVR--D-D--YAKFLLED---PRLNFVLNERPGA----PGGGLNHL   62 (120)
T ss_pred             EEEEEEeCCHHHHH--------HHHHHHhCCeEeccc--C-C--eeEEEecC---CceEEEEecCCCC----CCCCeeEE
Confidence            59999999999999        999999999875442  1 1  12333221   1233333322111    11588999


Q ss_pred             EEEECC---HHHHHHHHHHcCCeeeeCCcccc-CCCEEEEEEECCCCCEEEEeecC
Q 016689          196 GIAVED---VAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       196 ~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~-~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +|.|+|   +++++++|+++|+++...|.... .+..+.+|++|||||+|||++..
T Consensus        63 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          63 GVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence            999988   78899999999999887654332 22356789999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.46  E-value=6.5e-13  Score=109.63  Aligned_cols=113  Identities=18%  Similarity=0.180  Sum_probs=75.7

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC-----CccccCCCceeEEEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG-----VTEYDKGNGYAQIAI  327 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~-----~~~~~~g~g~~hiaf  327 (384)
                      ++||.|.|.|+++|++||++ |||++......  ..+  ..+..+.   ...+.+.....     ........+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPH--VEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCc--EEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99997533211  111  1122111   12222221100     000112334568888


Q ss_pred             EcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          328 GTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       328 ~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      .++   |+++++++++++|+++..+|...+++ .+.++|+|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            764   89999999999999998888777765 37899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.46  E-value=1.7e-12  Score=103.38  Aligned_cols=112  Identities=31%  Similarity=0.440  Sum_probs=83.5

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHH
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  334 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~  334 (384)
                      |+.+.|.|++++++||+++||++.......  ......++..+    +..+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            789999999999999999999998765432  12344445432    456666654332211235678899999999999


Q ss_pred             HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          335 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       335 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                      +.++++++|+.+..++....+ .++.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPW-GGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCC-CcEEEEEECCCCcEEeC
Confidence            999999999998877652222 25899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.46  E-value=1.3e-12  Score=106.74  Aligned_cols=108  Identities=21%  Similarity=0.258  Sum_probs=78.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      ++.|+.|.|+|++++++||++ |||++..+.  .+  .  +++..+.. ....+.+..       ...+++.|++|.|+|
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~--~~--~--~~~~~~~~-~~~~~~~~~-------~~~~~~~~~af~v~~   67 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTD-FGLEVAART--DD--E--LYYRGYGT-DPFVYVARK-------GEKARFVGAAFEAAS   67 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHH-cCCEEEEec--CC--e--EEEecCCC-ccEEEEccc-------CCcCcccEEEEEECC
Confidence            689999999999999999999 999986542  11  1  23332211 123332221       113577899999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      .+++.+.+++.|+++..++. .+++ ++.+||+|||||.|||+..
T Consensus        68 ~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          68 RADLEKAAALPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHHHHcCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEec
Confidence            99999999999998775443 3443 4789999999999999764

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.46  E-value=1.3e-12  Score=107.93  Aligned_cols=109  Identities=25%  Similarity=0.345  Sum_probs=77.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc--
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V--  329 (384)
                      ++.||.|.|+|++++++||+++|||++....+  +  .  .++..+    ...+.+.....   ....++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~----~~~~~l~~~~~---~~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--G--AYLEAG----DLWLCLSVDAN---VGPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--c--eEEecC----CEEEEEecCCC---CCCCCCeeeEEEEeCH
Confidence            47899999999999999999999999864432  1  1  122222    12233322111   12245678999998  


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|+++++++++++|+++..++.. +   ++.+||+|||||.|||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCC
Confidence            68999999999999998755432 2   36899999999999998743

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.5e-12  Score=107.97  Aligned_cols=113  Identities=24%  Similarity=0.227  Sum_probs=77.0

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC-----C-CCC-c
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----V-DKY-D  187 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~-----~-~~~-~  187 (384)
                      +.+|.|.|+|+++++        +||++ |||++......+  .  .+++..++   ...+.+.....     . ... .
T Consensus         1 ~~~v~l~V~Dl~~s~--------~FY~~-lGf~~~~~~~~~--~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~   64 (124)
T cd09012           1 MIFINLPVKDLEKST--------AFYTA-LGFEFNPQFSDE--K--AACMVISD---NIFVMLLTEDFFQTFTPKPIADT   64 (124)
T ss_pred             CEEEEeecCCHHHHH--------HHHHH-CCCEEccccCCC--C--eEEEEECC---ceEEEEEcHHHHhhccCCCcccC
Confidence            468999999999999        99976 999976432221  1  12232221   23444432110     0 100 1


Q ss_pred             CCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          188 IGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       188 ~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      .+.+..|++|.|+   |+++++++++++|+++..+|...+  ..+.+|++|||||+||++.
T Consensus        65 ~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          65 KKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHG--FMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCC--ceEEEEEECCCCCEEEEEE
Confidence            2345679999998   588999999999999988776554  3456799999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.1e-12  Score=108.28  Aligned_cols=113  Identities=19%  Similarity=0.220  Sum_probs=73.3

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC---c-c-ccCCCceeEEE--E
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---T-E-YDKGNGYAQIA--I  327 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~---~-~-~~~g~g~~hia--f  327 (384)
                      ||.|.|+|+++|++||+++|||++.....    .+  ..+....  ....+.+......   . . .....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--ccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999854321    11  1222111  1222222211100   0 0 01112345665  5


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCC-C--CCceEEEEECCCCCeEEEEe
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLP-G--INTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~-~--~~~~~~~~~DPdG~~iElve  375 (384)
                      .++|+++++++|+++|+++..+|.... +  +.++.+||+|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            678999999999999999987775321 1  22488999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.44  E-value=2.3e-12  Score=106.30  Aligned_cols=108  Identities=21%  Similarity=0.168  Sum_probs=76.0

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEE
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  196 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  196 (384)
                      ...|.|+|+++|+        +||++ |||++..+...     ..+++..+    ...+.+.......   ......|++
T Consensus         5 ~~~l~v~Dl~~s~--------~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~   63 (120)
T cd08350           5 IPNLPSRDLDATE--------AFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPDLD---PATSPFGCC   63 (120)
T ss_pred             cceeEcCCHHHHH--------HHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCcCC---CCCCcceEE
Confidence            3589999999999        99999 99998754321     23444433    2355555432211   112335799


Q ss_pred             EEECCHHHHHHHHHHcCCeee-------eCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          197 IAVEDVAKTVDLVKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       197 ~~v~Dv~~~~~~l~~~G~~~~-------~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      |.|+|+++++++|+++|+++.       .++...+ .+.+.++++|||||+|||.|.
T Consensus        64 ~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          64 LRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQP-WGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             EEeCCHHHHHHHHHHhCccccccCCCcccCCcCCC-CceeEEEEECCCCCEEEeecC
Confidence            999999999999999999853       2333222 456788999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.43  E-value=4.6e-12  Score=104.49  Aligned_cols=122  Identities=26%  Similarity=0.313  Sum_probs=88.8

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCC-CCccEEEEEEecCCCCCCc
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGP-EDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~lel~~~~~~~~~~  187 (384)
                      .++...+.|..|.|+|+++++        +||.++|||+.....+..+.  ..+.+..+. ...+.   +...   +...
T Consensus         4 ~~~~~~i~w~Ei~~~D~~ra~--------~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~~gG~---l~~~---~~~~   67 (127)
T COG3324           4 AGEKGTIVWFELPVSDLERAK--------AFYEKVFGWTFEDYFDMGEM--RYAVFPADGAGAGGG---LMAR---PGSP   67 (127)
T ss_pred             cccCCccEEEeeecCCHHHHH--------HHHHHhhCceecccccCCCc--eEEEEECCCccccce---eccC---CcCC
Confidence            455668999999999999999        99999999998765444333  333443221 22221   1111   1111


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ++.+..++.|.|+|++++.+|++++|+++++++.+.++ .++++.+.||+||+|.|++..
T Consensus        68 p~~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          68 PGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CCCCCEEEEEecCChHHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            22344568999999999999999999999999988874 677888999999999998754

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.43  E-value=2.6e-12  Score=106.01  Aligned_cols=113  Identities=19%  Similarity=0.151  Sum_probs=75.2

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecC-----CCCCCcCC
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY-----GVDKYDIG  189 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~-----~~~~~~~g  189 (384)
                      |+||.|.|+|+++|+        +||+. |||++......    ...+.+..+.   ...+.+....     .......+
T Consensus         1 ~~~i~l~V~D~~~a~--------~FY~~-LGf~~~~~~~~----~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~   64 (122)
T cd07235           1 LDAVGIVVADMAKSL--------DFYRR-LGFDFPEEADD----EPHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTG   64 (122)
T ss_pred             CceEEEEeccHHHHH--------HHHHH-hCceecCCcCC----CCcEEEEeCC---CEEEEEEcccceeeecCCCCCCC
Confidence            579999999999999        99975 99997533211    1123333221   1222221110     01111123


Q ss_pred             CCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          190 TGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       190 ~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      .+..|++|.+.   |+++++++|+++|+++..+|...+. +.+.++++|||||.|||+
T Consensus        65 ~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          65 GHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            35567888865   7999999999999998887766654 446788999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=4.4e-12  Score=103.31  Aligned_cols=108  Identities=25%  Similarity=0.342  Sum_probs=77.2

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC-CCcCCCCceEEE
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KYDIGTGFGHFG  196 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-~~~~g~g~~hi~  196 (384)
                      +.|.|+|+++++        +||+++|||++....    ..+.  .+..+.   ...+.+....... ......+..|++
T Consensus         2 ~~l~v~d~~~a~--------~FY~~~lg~~~~~~~----~~~~--~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~   64 (114)
T cd07261           2 VLLYVEDPAASA--------EFYSELLGREPVELS----PTFA--LFVLGS---GVKLGLWSRHTVEPASDATGGGSELA   64 (114)
T ss_pred             EEEEECCHHHHH--------HHHHHHcCCCccCCC----CceE--EEEeCC---CcEEEEeeccccCCCCCCCCCceEEE
Confidence            679999999999        999999999976431    2232  233211   2344554332221 112345778999


Q ss_pred             EEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          197 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       197 ~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |.|+|   +++++++++++|+++..+|...+.|  +.++|+|||||+|||+
T Consensus        65 ~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          65 FMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            99986   8889999999999999887666543  4678999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.42  E-value=8.2e-13  Score=117.41  Aligned_cols=119  Identities=37%  Similarity=0.713  Sum_probs=102.9

Q ss_pred             CCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-----------CcEEEEEeecCCCCcceEEEEeccCCCcccc
Q 016689          249 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYD  317 (384)
Q Consensus       249 ~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~  317 (384)
                      ...++-|+.+.|.|.++++.||+++|||++.+..++++           ++|+-.|+++++++.|+++||++++++..+.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            34588999999999999999999999999998877765           6778899999999999999999999999999


Q ss_pred             CCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          318 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       318 ~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      -|+++.||.+.++|+-..++.+..-|.+        ..+ .-++++.||||+.+++++.
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g-~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVNAPGGK--------GSG-CGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccc-eEEEEEECCCCcEEEEecc
Confidence            9999999999999988888887765542        111 3568899999999999973

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.40  E-value=9.5e-13  Score=110.17  Aligned_cols=123  Identities=31%  Similarity=0.414  Sum_probs=78.8

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCC---------------CCcceEEEEeccCCCccc
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP---------------EDKNAVLELTYNHGVTEY  316 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~---------------~~~~~~lel~~~~~~~~~  316 (384)
                      .+.|.++++.|+.+|..||++++|+.+......++..+...+++...               ...+..++++++++....
T Consensus        22 ~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~  101 (170)
T KOG2944|consen   22 LLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESP  101 (170)
T ss_pred             hhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCCC
Confidence            35666666666666666666666665554332221111111111100               012567888888776432


Q ss_pred             -----cC----CCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          317 -----DK----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       317 -----~~----g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                           .+    +.|.+||||+|+|++++.+++++.|+++...|.+  |..-.++++.||||+.|||...
T Consensus       102 ~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~d--Gk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  102 PDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKD--GKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             cchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCC--ccccceeEEECCCCCeEEEeec
Confidence                 12    2389999999999999999999999997765432  2212679999999999999864

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=7.6e-12  Score=102.56  Aligned_cols=111  Identities=22%  Similarity=0.213  Sum_probs=76.4

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC------CccccCCCceeEEEEEc
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG------VTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~------~~~~~~g~g~~hiaf~V  329 (384)
                      |.|.|.|++++.+||+++|||++..+.   +..+.  ++..+    +..+.+.....      ......+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~~--~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGVA--FFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCceE--EEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986541   12232  23321    34454443211      11111222334566654


Q ss_pred             ---CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          330 ---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       330 ---dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                         +|++++++++++.|+++..+|...+++ ++.++++||+||.|||..+
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~~  121 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAHN  121 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEeeC
Confidence               689999999999999998887766654 5889999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.39  E-value=8.2e-12  Score=101.75  Aligned_cols=106  Identities=23%  Similarity=0.231  Sum_probs=73.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeE--EEEEc
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQ--IAIGT  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~h--iaf~V  329 (384)
                      .+.||.|.|.|++++++||+ .|||++..+.   +  . ..+...+.  .+..+.+....       ..+..|  +++.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~--~-~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D--G-LELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C--c-eEEEecCC--CceEEEeecCC-------CCceeeEEEEeEh
Confidence            58999999999999999997 6999986432   1  1 12222111  23344443211       223344  45556


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +|+++++++++++|+++..++  .+.+ .+.+||+|||||.|||...
T Consensus        66 ~d~~~~~~~l~~~Gi~~~~~~--~~~~-~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHLEAAGVALAAAP--PGAD-PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHHHHcCCceecCC--CcCC-CCEEEEECCCCCEEEEecC
Confidence            899999999999999987665  2222 3578999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.38  E-value=5.6e-12  Score=102.55  Aligned_cols=95  Identities=27%  Similarity=0.335  Sum_probs=76.8

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC--CcCCCCce
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFG  193 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~g~~  193 (384)
                      +||+|.|+|+++|+        +||+++||++.......+......+++..+..  ...+||.+......  ...+.|+.
T Consensus         1 dHv~i~V~Dl~~a~--------~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~   70 (109)
T PF13669_consen    1 DHVGIVVPDLDAAA--------AFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIH   70 (109)
T ss_dssp             EEEEEEES-HHHHH--------HHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEE
T ss_pred             CEEEEEcCCHHHHH--------HHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEE
Confidence            69999999999999        99999999998776666666677777776532  26889887655432  23678999


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCC
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREP  220 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p  220 (384)
                      |+||.|+|++++.++|+++|+++..++
T Consensus        71 Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   71 HIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             EEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence            999999999999999999999988764

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=1.4e-11  Score=100.74  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=71.9

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEE
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  197 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~  197 (384)
                      ..|.|+|+++|+        +||++ |||++....    .  ..+++..+    ...+.+....... .   .+-.+++|
T Consensus         5 ~~l~v~Dl~~s~--------~FY~~-LGf~~~~~~----~--~~~~l~~~----~~~l~l~~~~~~~-~---~~~~~~~~   61 (113)
T cd08356           5 PFIPAKDFAESK--------QFYQA-LGFELEWEN----D--NLAYFRLG----NCAFYLQDYYVKD-W---AENSMLHL   61 (113)
T ss_pred             eccccccHHHHH--------HHHHH-hCCeeEecC----C--CEEEEEcC----CEEEEeecCCCcc-c---ccCCEEEE
Confidence            468899999999        99987 999997653    1  24556543    2233333211111 1   22347899


Q ss_pred             EECCHHHHHHHHHHcCCeeee-----CCccccCCCEEEEEEECCCCCEEEEee
Q 016689          198 AVEDVAKTVDLVKAKGGKVTR-----EPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       198 ~v~Dv~~~~~~l~~~G~~~~~-----~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      .|+|+++++++|+++|+++..     ++...+ .+.+.++++|||||+|+|.|
T Consensus        62 ~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~-~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          62 EVDDLEAYYEHIKALGLPKKFPGVKLPPITQP-WWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             EECCHHHHHHHHHHcCCcccccceecCccccC-CCcEEEEEECCCccEEEeeC
Confidence            999999999999999987532     233222 35678899999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=1.4e-11  Score=100.75  Aligned_cols=104  Identities=20%  Similarity=0.159  Sum_probs=72.0

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  335 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~  335 (384)
                      ..|.|+|+++|++||++ |||++..+.    ..+  .++..+    ...+.+......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~--~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN----DNL--AYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC----CCE--EEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHHH
Confidence            46889999999999987 999997542    123  334432    233334321111    112345789999999999


Q ss_pred             HHHHHHCCCeEe-----cCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          336 AEAIKLSGGKIT-----REPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       336 ~~~l~~~G~~i~-----~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +++|+++|+++.     .++...+++ .+.++|+|||||.|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence            999999998743     233333444 489999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.32  E-value=3.6e-11  Score=98.51  Aligned_cols=110  Identities=25%  Similarity=0.322  Sum_probs=75.4

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC------CCCCcCCCC
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------VDKYDIGTG  191 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~------~~~~~~g~g  191 (384)
                      |.|.|.|++++.        +||+++|||++..+   ++.  ..+++..+    ...+++.....      ......+.+
T Consensus         2 i~l~v~d~~~a~--------~FY~~~lg~~~~~~---~~~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~   64 (121)
T cd07251           2 ITLGVADLARSR--------AFYEALLGWKPSAD---SND--GVAFFQLG----GLVLALFPREELAKDAGVPVPPPGFS   64 (121)
T ss_pred             eeEeeCCHHHHH--------HHHHHhcCceeccc---CCC--ceEEEEcC----CeEEEEecchhhhhhcCCCCCCCCcc
Confidence            689999999999        99999999998654   122  23445432    23455543211      111112223


Q ss_pred             ceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          192 FGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       192 ~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ..|+++.+   +|+++++++++++|+++..++...+. +++.++++||+||+||+..
T Consensus        65 ~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          65 GITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             ceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence            34566655   57999999999999999877765543 4677889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.28  E-value=1.9e-11  Score=99.33  Aligned_cols=95  Identities=23%  Similarity=0.277  Sum_probs=75.7

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc--cCCCceeEEEEEcCC
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY--DKGNGYAQIAIGTDD  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~--~~g~g~~hiaf~VdD  331 (384)
                      +||.|.|+|+++|++||+++||++.......+.......++..+..  ...+||.++......  ..+.|++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            6999999999999999999999998776666666667666665432  267888876554322  467899999999999


Q ss_pred             HHHHHHHHHHCCCeEecCC
Q 016689          332 VYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p  350 (384)
                      ++++.++++++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987653

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.26  E-value=5.5e-10  Score=105.38  Aligned_cols=219  Identities=21%  Similarity=0.273  Sum_probs=138.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC------
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------  185 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------  185 (384)
                      ..++.+|.+.|.|.+.+.        .=|-..|||+...+.-..   -..+|-. |  +    +.+.-+..+..      
T Consensus        20 ~~GfeFvEf~~~d~~~~l--------~~l~~~lGF~~~~~Hrsk---~v~l~rQ-G--d----inlvvn~~~~s~a~~f~   81 (363)
T COG3185          20 TDGFEFVEFAVPDPQEAL--------GALLGQLGFTAVAKHRSK---AVTLYRQ-G--D----INLVVNAEPDSFAAEFL   81 (363)
T ss_pred             CCceeEEEEecCCHHHHH--------HHHHHHhCcccccccccc---ceeEEEe-C--C----EEEEEcCCCcchhhHHH
Confidence            458999999999995555        455567999976543211   1222222 1  1    12222211111      


Q ss_pred             CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc-----ccc---CCCEEEEEEECCCCC-E---EEEeec--CCCC-
Q 016689          186 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG-----PVK---GGNTVIAFIEDPDGY-K---FELLER--GPTP-  250 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~-----~~~---~g~~~~~~~~DPdG~-~---iel~~~--~~~~-  250 (384)
                      ...|++..-++|.|+|.+.++++..+.|.+....+.     .++   +-++..+||.|.+|. -   .++...  ...+ 
T Consensus        82 ~~Hgps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~  161 (363)
T COG3185          82 DKHGPSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASG  161 (363)
T ss_pred             HhcCCchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCccccccccccccccccc
Confidence            235677888999999999999999999995443321     111   223446788888831 1   122211  1111 


Q ss_pred             ----CCceeeeeec--CChHHHHHHHHHhhCCeEeeeecCCCCc---EEEEEeecCCCCcceEEEEeccCCCcc------
Q 016689          251 ----EPLCQVMLRV--GDLDRAINFYKKAFGMELLRKRDNPDYK---YTIAVMGYGPEDKNAVLELTYNHGVTE------  315 (384)
Q Consensus       251 ----~~~~hV~L~V--~Dle~s~~FY~~vLG~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~lel~~~~~~~~------  315 (384)
                          ..++|+...|  ..++.+..||+++|||+.....+.++..   .+-++..   ......|.+........      
T Consensus       162 ~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S---p~G~vrlplN~s~~~~sqi~efl  238 (363)
T COG3185         162 GVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS---PCGKVRLPLNESADDKSQIGEFL  238 (363)
T ss_pred             ccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec---CCCcEEeecccCCCchhHHHHHH
Confidence                2689998776  5899999999999999998777655432   1222222   12234444443222221      


Q ss_pred             -ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCc
Q 016689          316 -YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  351 (384)
Q Consensus       316 -~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~  351 (384)
                       ...|.|++||||.++||.++++++++.|+++...|.
T Consensus       239 ~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         239 REYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             HHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence             135789999999999999999999999999988774

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.07  E-value=1.3e-09  Score=97.80  Aligned_cols=99  Identities=26%  Similarity=0.399  Sum_probs=73.7

Q ss_pred             ceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC--CceEEEEEeeCCCCccEEEEEEecCCC-C---
Q 016689          113 RRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGV-D---  184 (384)
Q Consensus       113 ~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~-~---  184 (384)
                      .+++||++.|+  |+++++        +||+++|||+.....+.++  .......+...  .....++|...... .   
T Consensus         2 ~~iDHv~i~V~~~dl~~a~--------~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~   71 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWV--------DFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQ   71 (191)
T ss_pred             ceeeEEEeecChhHHHHHH--------HHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccH
Confidence            47999999999  999999        9999999999877654433  23334445432  23456666543321 1   


Q ss_pred             -----CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc
Q 016689          185 -----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  221 (384)
Q Consensus       185 -----~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~  221 (384)
                           ....|.|+.|+||.|+|+++++++|+++|+++...|.
T Consensus        72 ~~~fl~~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          72 IQEFLEYYGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             HHHHHHHhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence                 1234789999999999999999999999999887664

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.06  E-value=1.2e-09  Score=97.90  Aligned_cols=98  Identities=24%  Similarity=0.367  Sum_probs=74.4

Q ss_pred             CceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCC--CcEEEEEeecCCCCcceEEEEeccCCC--c-------cccC
Q 016689          252 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKYTIAVMGYGPEDKNAVLELTYNHGV--T-------EYDK  318 (384)
Q Consensus       252 ~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~lel~~~~~~--~-------~~~~  318 (384)
                      +++||.+.|.  |++++++||+++|||+.......++  .......+..+.  ....+++..+...  .       ....
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            5899999999  9999999999999999887654433  234444454322  3566777764431  1       1134


Q ss_pred             CCceeEEEEEcCCHHHHHHHHHHCCCeEecCCc
Q 016689          319 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  351 (384)
Q Consensus       319 g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~  351 (384)
                      ++|++||||.|+|+++++++++++|+++..+|.
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            789999999999999999999999999988774

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.02  E-value=3.7e-09  Score=83.89  Aligned_cols=119  Identities=31%  Similarity=0.346  Sum_probs=76.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC---CC-CcC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DK-YDI  188 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~-~~~  188 (384)
                      +.+-|.++.|.|+++++        +||.++||++.-+..+      .++-+..-  .+...+.+......   .+ ...
T Consensus         3 ~~~FHLA~pV~Dl~~tr--------~FYgevlG~~~GRstd------~wvdfDfy--GHQ~v~Hl~~q~~~~~~g~V~~~   66 (138)
T COG3565           3 PVPFHLAIPVNDLDETR--------RFYGEVLGCKEGRSTD------TWVDFDFY--GHQVVAHLTPQPDSQGSGKVDGH   66 (138)
T ss_pred             ccceEEeeeccccHHHH--------hhhhhhcccccccccc------eEEEeeec--ccEEEEEecCCcccccCcccCCC
Confidence            45789999999999999        9999999999754432      22322221  11222223221110   00 111


Q ss_pred             CCCceEEE--EEECCHHHHHHHHHHcCCeeeeCCccc-c--CCCEEEEEEECCCCCEEEEeecC
Q 016689          189 GTGFGHFG--IAVEDVAKTVDLVKAKGGKVTREPGPV-K--GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       189 g~g~~hi~--~~v~Dv~~~~~~l~~~G~~~~~~p~~~-~--~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +--.-|++  +.++|--++.++|+++|+...-+|.-. +  .|..+.+|+.||.||.+|+-.-+
T Consensus        67 ~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          67 GVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             CCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            22334544  457799999999999999877665322 2  25678899999999999996543

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.95  E-value=7.5e-09  Score=83.60  Aligned_cols=115  Identities=21%  Similarity=0.210  Sum_probs=75.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEecc-C-CCc----cccCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-H-GVT----EYDKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~-~-~~~----~~~~g~g~~hi  325 (384)
                      ....|.|.|.|+++|++||+. |||+......++...  ......    .-.++-|... . ...    .......-..|
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~a~--~mi~~~----ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDEDAA--CMIISD----NIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccccce--eEEEec----cEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            356789999999999999965 999987665444322  221221    1222222221 0 000    01223455688


Q ss_pred             EEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          326 AIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       326 af~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      ++.+.   ++|+..+++.++|++...+|.+...  .+...|+|||||.||++-
T Consensus        76 ~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          76 SLSAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EeccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEE
Confidence            89884   6899999999999999777665433  355679999999999976

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.92  E-value=4.2e-08  Score=82.01  Aligned_cols=110  Identities=16%  Similarity=0.106  Sum_probs=72.1

Q ss_pred             eeec-CChHHHHHHHHHhhCCeEeeeecCC----------CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          257 MLRV-GDLDRAINFYKKAFGMELLRKRDNP----------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       257 ~L~V-~Dle~s~~FY~~vLG~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                      -|.+ .|.++|++||+++||+++......+          .+.+....+..+    +..+-+......... ......++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            4566 8999999999999999998654321          122222333322    223333322111111 12334588


Q ss_pred             EEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          326 AIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       326 af~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                      ++.|+|   +++++++|.+.| ++..+|...+++ .+..+++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWS-PLFGWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcc-cccEEEECCCCCEEEe
Confidence            999886   777889987655 888888877776 4789999999999997

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.85  E-value=9.1e-09  Score=84.18  Aligned_cols=122  Identities=25%  Similarity=0.413  Sum_probs=74.0

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc---eEEEEEeeCCCCccEEEE--------EEecC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR---YTNAFLGYGPEDSHFVVE--------LTYNY  181 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~---~~~~~l~~g~~~~~~~le--------l~~~~  181 (384)
                      +++.||.+.|+|+++++        +||+++|||++..........   ....+.............        .....
T Consensus         1 ~~l~hv~l~v~dl~~s~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (138)
T COG0346           1 MGIHHVTLAVPDLEASI--------DFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVG   72 (138)
T ss_pred             CceEEEEEeeCCHhHhH--------HHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeeccccccccccccc
Confidence            37899999999999999        999999999998765432221   112222211000000000        00000


Q ss_pred             CCC-CCcCC-CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          182 GVD-KYDIG-TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       182 ~~~-~~~~g-~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ... ....+ .+..|+++.++|   ...........|..+...+. ..  ....+|++||||+.||+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~--~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          73 DVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GR--GGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             ceEEeecCchhccCceeEecccccccceEEEeeCCCCCEEEeecC-CC--cceEEEEECCCCcEEEeeC
Confidence            000 01111 357799999998   66677777788888765433 21  1228899999999999964

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.84  E-value=1.6e-07  Score=78.93  Aligned_cols=116  Identities=18%  Similarity=0.170  Sum_probs=82.2

Q ss_pred             eeecC-ChHHHHHHHHHhhCCeEeeeecCCC----------CcEEEEEeecCCCCcceEEEEeccCCCccccCC-CceeE
Q 016689          257 MLRVG-DLDRAINFYKKAFGMELLRKRDNPD----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG-NGYAQ  324 (384)
Q Consensus       257 ~L~V~-Dle~s~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g-~g~~h  324 (384)
                      -|..+ |.++|++||+++||.++..+....+          +...-..+..+    ...+-+...........+ +.-..
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            35566 9999999999999999987766554          23333333332    222323222211112222 23457


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |.+.++|++++.+++.+.|+++..++....++ .++..++||.|+.|-|....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCc
Confidence            77888899999999999999999999988887 48899999999999998755

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.83  E-value=5.4e-08  Score=85.95  Aligned_cols=147  Identities=22%  Similarity=0.316  Sum_probs=86.1

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---C---CC---
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---V---DK---  185 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~---~~---  185 (384)
                      |+|+++.|+|++++.        ++|++.|||++......+..+..+..+.++.   . .||+....+   .   ..   
T Consensus         1 lDH~v~~v~dl~~a~--------~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~   68 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAV--------ERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFG   68 (175)
T ss_dssp             EEEEEEE-TTGGG------------GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TT
T ss_pred             CCEEEEEcCCHHHHH--------HhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCccccccccccee
Confidence            689999999999999        9998899999998877776555666666642   3 788865322   1   11   


Q ss_pred             ---CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCC--EEEEEEECC----CCCEEEEeecCCC-C-----
Q 016689          186 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDP----DGYKFELLERGPT-P-----  250 (384)
Q Consensus       186 ---~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~--~~~~~~~DP----dG~~iel~~~~~~-~-----  250 (384)
                         ...+.|+.++|+.++|+++..++++++|+.... +...+++.  ...++..|+    .+..-.+++..+. +     
T Consensus        69 ~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~~~~-r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h  147 (175)
T PF13468_consen   69 LDRLAGGEGLYGWALRTDDIEAVAARLRAAGLDAGS-RVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARH  147 (175)
T ss_dssp             THHHHT--EEEEEEEE-S-HHHHHHHHHTTT-EEEE-EEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT
T ss_pred             chhhcCCCCeEEEEEecCCHHHHHHHHHhcCCCCCC-cCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccC
Confidence               124679999999999999999999999986211 11111111  234455664    2455566654332 1     


Q ss_pred             ----CCceeeeeecCChHHHHHHHHHhh
Q 016689          251 ----EPLCQVMLRVGDLDRAINFYKKAF  274 (384)
Q Consensus       251 ----~~~~hV~L~V~Dle~s~~FY~~vL  274 (384)
                          ..|.+|.+.++|.+++.++|.++|
T Consensus       148 ~ng~~~i~~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  148 PNGALGITRVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             --TTEEEEEEEEEETTHHHHHHHHHHH-
T ss_pred             CCccceEEEEEEEeCCHHHHHHHHHhhC
Confidence                259999999999999999999875

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.81  E-value=1.9e-07  Score=77.96  Aligned_cols=111  Identities=11%  Similarity=0.122  Sum_probs=72.2

Q ss_pred             EEEEe-CCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC----------CCceEEEEEeeCCCCccEEEEEEecCCCCCC
Q 016689          118 VVYRV-GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP----------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKY  186 (384)
Q Consensus       118 v~l~V-~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~----------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~  186 (384)
                      ..|.+ .|.++|+        +||+++||+++......+          .+....+.+..+    +..+.+.........
T Consensus         3 p~L~~~~~~~eAi--------~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~   70 (128)
T cd06588           3 PYLWFNGNAEEAL--------EFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF   70 (128)
T ss_pred             eEEeeCCCHHHHH--------HHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC
Confidence            35677 9999999        999999999988765321          122334444443    123333222111111


Q ss_pred             cCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEE
Q 016689          187 DIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       187 ~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel  243 (384)
                       .+.+-.++++.|+|   +++++++|++.| ++..++...+. +.+..+++||+|+.|+|
T Consensus        71 -~~~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          71 -TFGNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQI  127 (128)
T ss_pred             -CCCCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCc-ccccEEEECCCCCEEEe
Confidence             12234468999887   667889987766 88777776654 45677899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.79  E-value=2.2e-08  Score=81.84  Aligned_cols=121  Identities=21%  Similarity=0.269  Sum_probs=73.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCc---EEEEEeecCCCCcceEEEE--------eccCCCc-cccCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK---YTIAVMGYGPEDKNAVLEL--------TYNHGVT-EYDKG  319 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~lel--------~~~~~~~-~~~~g  319 (384)
                      .+.||.|.|+|+++|++||+++||+++..........   ....+..............        ....... .....
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5789999999999999999999999998665432221   1111111110000000000        0000000 01111


Q ss_pred             -CceeEEEEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          320 -NGYAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       320 -~g~~hiaf~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                       .+..|+++.+++   ...........|..+...+. ...  +..+||+||||+.||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             246899999988   66777777888888765443 223  238999999999999974

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.79  E-value=7.6e-08  Score=76.52  Aligned_cols=117  Identities=22%  Similarity=0.265  Sum_probs=75.2

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc--cCC----CceeEEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY--DKG----NGYAQIA  326 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~--~~g----~g~~hia  326 (384)
                      +-|+.+.|+|++++++||.++||.+.-++.+      .|+.+..-.  .+.+..+.........  -.+    ....-+.
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyG--HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYG--HQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecc--cEEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            5689999999999999999999999865432      122222111  1222223222111110  011    1223345


Q ss_pred             EEcCCHHHHHHHHHHCCCeEecCCccC----CCCCceEEEEECCCCCeEEEEecCc
Q 016689          327 IGTDDVYKTAEAIKLSGGKITREPGPL----PGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       327 f~VdDvd~~~~~l~~~G~~i~~~p~~~----~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +.++|--++.++|+++|+....+|.-.    ++- .+.+++.||.||.+|+-.-.+
T Consensus        77 l~~edW~alaerlea~gi~~~i~P~vRF~Ge~gE-q~TlFl~DP~gN~lEfK~fR~  131 (138)
T COG3565          77 LPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGE-QRTLFLFDPSGNALEFKGFRD  131 (138)
T ss_pred             EEHHHHHHHHHHHHHcCCCcccCceEEecCCccc-eEEEEEECCCCCeeeeecccc
Confidence            667888899999999999988887532    332 378999999999999976543

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.73  E-value=3.2e-07  Score=90.16  Aligned_cols=121  Identities=22%  Similarity=0.249  Sum_probs=84.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc----c--cCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE----Y--DKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~----~--~~g~g~~hi  325 (384)
                      .++||.+.|+|++++++||.+.|||+........... ..+.+..+    ...+++..+.....    +  ..++++.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~i   76 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKDV   76 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEEE
Confidence            5789999999999999999999999987652222222 22223322    45677765433221    1  357899999


Q ss_pred             EEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|+|+++++++++++|++++.+|.....+.-+..-++-++|..+-|+++.
T Consensus        77 af~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~  128 (353)
T TIGR01263        77 AFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRG  128 (353)
T ss_pred             EEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCC
Confidence            9999999999999999999998877643111123444666777777777643

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.70  E-value=2e-07  Score=75.39  Aligned_cols=118  Identities=25%  Similarity=0.320  Sum_probs=75.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEec--CC-----CCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN--YG-----VDK  185 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~--~~-----~~~  185 (384)
                      .++..|.|.|+|++++.        +||+ .|||+.-....  +.. ....+-.+    ...+-|...  +.     +-.
T Consensus         2 ~~mIFvNLPVkDL~~S~--------~Fy~-alGfk~Npq~s--de~-a~~mi~~~----ni~vMLL~~~~fq~F~~~~i~   65 (133)
T COG3607           2 TQMIFVNLPVKDLEASK--------AFYT-ALGFKFNPQFS--DED-AACMIISD----NIFVMLLEEARFQTFTKRQIA   65 (133)
T ss_pred             ceEEEEecchhhHHHHH--------HHHH-HhCcccCCCcc--ccc-ceeEEEec----cEEEEEeccHHhhhhcccccc
Confidence            36778999999999999        9997 59999864432  221 22232211    222222211  00     001


Q ss_pred             CcCCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          186 YDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ......-.-+++.+.   ++++++++..++|++...++.+.  |..+...|.||||+.||++.-.+
T Consensus        66 dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~--gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          66 DTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDE--GFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCcccc--ccccceeeeCCCCCeEEEEEeCH
Confidence            111223334778776   48889999999999997776654  34555669999999999987543

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.70  E-value=9.9e-07  Score=74.11  Aligned_cols=117  Identities=20%  Similarity=0.188  Sum_probs=80.6

Q ss_pred             EEEeC-CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC----------CceEEEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          119 VYRVG-DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       119 ~l~V~-Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      -|.+. |-++|+        +||+++||.++..+...++          +....+-+..+    ...+-+....+.....
T Consensus         5 Yl~f~gn~~~Al--------~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~   72 (136)
T COG2764           5 YLFFNGNAREAL--------AFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGAT   72 (136)
T ss_pred             EEEECCCHHHHH--------HHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcc
Confidence            46677 999999        9999999999988776655          34444444443    1122222221111112


Q ss_pred             CCC-CceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          188 IGT-GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       188 ~g~-g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .++ .-.-+.+.++|++++++++.+.|+++..++....+| .++..++||.|+.|-|....+
T Consensus        73 ~~~~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          73 EGGGTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             cCCCeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCcc
Confidence            222 222377778899999999999999999988777654 456679999999999976654

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.49  E-value=7.4e-07  Score=87.89  Aligned_cols=99  Identities=17%  Similarity=0.249  Sum_probs=72.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-----ceEEEEEeeCCCCccEEEEEEecCC---C
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-----RYTNAFLGYGPEDSHFVVELTYNYG---V  183 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~lel~~~~~---~  183 (384)
                      ..+|+||++.|++++.++        .||+++|||+..+..+.++.     ......+..+  .....++|.....   .
T Consensus       178 l~~IDHi~iaV~~ld~a~--------~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v~ipLnEP~~~~~~  247 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAV--------NYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMVLLPLNEPTFGTKR  247 (398)
T ss_pred             cceeCcceechhhHHHHH--------HHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcEEEEeccCCCCCCC
Confidence            458999999999999999        99999999998765443221     1234444432  2245666654321   1


Q ss_pred             -C------CCcCCCCceEEEEEECCHHHHHHHHHHc----CCeeeeCC
Q 016689          184 -D------KYDIGTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREP  220 (384)
Q Consensus       184 -~------~~~~g~g~~hi~~~v~Dv~~~~~~l~~~----G~~~~~~p  220 (384)
                       .      ....|.|+.||||.++|+.+++++|+++    |+++...|
T Consensus       248 ~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        248 KSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             cChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence             1      1345689999999999999999999999    99988754

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.44  E-value=1.8e-06  Score=82.58  Aligned_cols=106  Identities=25%  Similarity=0.347  Sum_probs=72.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      ....||.|.|.|+++|++||+++|++..   +..  +..  ..+  +  +....+-+.+.     .........+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~---Fsd--e~a--~cm--~--dtI~vMllt~~-----D~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC---WDG--DKL--FLL--G--KTSLYLQQTKA-----EKKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC---CCC--Ccc--ccc--c--CcEEEEEecCC-----CCCCcceEEEEeccC
Confidence            4688999999999999999999988874   211  111  112  1  12333333332     112334567888886


Q ss_pred             ---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 ---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                         ++|+.+++..++|++...+|.++..    .--|+|||||.||++-.
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEEE
Confidence               5889999999999977665554433    34689999999999853

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.36  E-value=6.1e-07  Score=83.51  Aligned_cols=126  Identities=18%  Similarity=0.255  Sum_probs=84.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEe--ccCCCcc-----ccCCCceeE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT--YNHGVTE-----YDKGNGYAQ  324 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~--~~~~~~~-----~~~g~g~~h  324 (384)
                      +++||.+.|.|..+++.||+..|||+.....+.+.+...+........  ..++.+.  ++++...     ..+|.++--
T Consensus        17 ~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l~~Hgdgvkd   94 (381)
T KOG0638|consen   17 RFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHLVKHGDGVKD   94 (381)
T ss_pred             eeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhhhhcccchhc
Confidence            699999999999999999999999999865433221111111111011  1222222  2222211     135678889


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccCCCC--CceEEEEECCCCCeEEEEecCcc
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      +||+|+|.+++.+.+.++|+++..+|......  .-+++.++.+.-....+++..++
T Consensus        95 vafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y  151 (381)
T KOG0638|consen   95 VAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGY  151 (381)
T ss_pred             eEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccc
Confidence            99999999999999999999999998765332  23677788877666666665543

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.34  E-value=3e-06  Score=81.08  Aligned_cols=106  Identities=19%  Similarity=0.319  Sum_probs=71.2

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      -+.-||+|.|+|+++|+        +||+++||+.. ..    ++. . +-+  +  +.-+.+-++..   +..  ...-
T Consensus       246 ~~~IfVNLpV~DL~rS~--------~FYt~LF~~n~-Fs----de~-a-~cm--~--dtI~vMllt~~---D~~--~~~e  301 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAK--------KFYSKMFGLEC-WD----GDK-L-FLL--G--KTSLYLQQTKA---EKK--NRGT  301 (357)
T ss_pred             CceEEEEeeeCCHHHHH--------HHHHHHhCCCC-CC----CCc-c-ccc--c--CcEEEEEecCC---CCC--Ccce
Confidence            46889999999999999        99999988874 22    211 1 111  1  22222222322   111  1233


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .-+|+.+++   +++++++..++|++...++.++.  .  .--|.||||+.||++..
T Consensus       302 vLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~G--f--~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        302 TTLSLELECEHDFVRFLRRWEMLGGELGEQADGHF--P--LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             EEEEeccCCHHHHHHHHHHHHHcCCCCCCCccccc--C--cceeECCCCCEEEEEEE
Confidence            348888885   88899999999998766666553  2  33489999999999865

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.33  E-value=2.5e-05  Score=63.15  Aligned_cols=113  Identities=26%  Similarity=0.365  Sum_probs=63.8

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEE
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  195 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  195 (384)
                      .+-+|+|.|-+..+        +||++.|||+++....      ..++++.......+.+|-.............-++++
T Consensus         2 ~~PvlRVnnR~~ni--------~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~i   67 (125)
T PF14506_consen    2 IIPVLRVNNRDLNI--------DFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRI   67 (125)
T ss_dssp             EEEEEEESSHHHHH--------HHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEE
T ss_pred             cCceEEEcCHHHhH--------HHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEE
Confidence            46789999999999        9999999999986542      367777543333444443322222233344578899


Q ss_pred             EEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          196 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       196 ~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .+.|++..+ .+.|.++|.++..   -..+..++.+-..+|+|.+|.+...
T Consensus        68 vIkv~~~~E-Ie~LLar~~~~~~---l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   68 VIKVPNPKE-IEALLARGAQYDR---LYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             EEEESSHHH-HHHHHHC-S--SE---EEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             EEEcCCHHH-HHHHHhcccccce---eEEcCCceEEEEECCCCCEEEEEEc
Confidence            999999777 4555666665432   2333344555567999999988654

>PRK10148 hypothetical protein; Provisional

Probab=97.99  E-value=0.00038  Score=59.65  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=71.8

Q ss_pred             eeec-CChHHHHHHHHHhhCCeEeeeec---CC-----------------CCcEEEEEeecCCCCcceEEEEeccCCCcc
Q 016689          257 MLRV-GDLDRAINFYKKAFGMELLRKRD---NP-----------------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE  315 (384)
Q Consensus       257 ~L~V-~Dle~s~~FY~~vLG~~~~~~~~---~~-----------------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~  315 (384)
                      -|.. .|.++|++||+++||.++.....   .+                 ++.+....+..+    ...+-+..... ..
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~-~~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIP-SG   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCC-Cc
Confidence            3455 48999999999999998864431   10                 122223333332    12232222110 01


Q ss_pred             ccCCCceeEEEEEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          316 YDKGNGYAQIAIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       316 ~~~g~g~~hiaf~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ...+ .-.++.+.++|.++   ++++| +.|+++..++.+.+++ .++..++||.|+.|.|...+
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~~  142 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVVK  142 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchh-hccEEEECCCCCEEEEEecC
Confidence            1111 24578888888776   55666 5888999999888876 37899999999999998754

>PRK10148 hypothetical protein; Provisional

Probab=97.78  E-value=0.0017  Score=55.68  Aligned_cols=117  Identities=16%  Similarity=0.123  Sum_probs=72.8

Q ss_pred             EEEEe-CCHHHHHhhcCCChhHHhhhccCCEEEeeee---CC-----------------CCceEEEEEeeCCCCccEEEE
Q 016689          118 VVYRV-GDLDKTINSLGCGYCRFYTECLGMKLLRKRD---IP-----------------EDRYTNAFLGYGPEDSHFVVE  176 (384)
Q Consensus       118 v~l~V-~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~---~~-----------------~~~~~~~~l~~g~~~~~~~le  176 (384)
                      .-|.. .|.++|+        +||+++||.++.....   .+                 ++....+-+..+    ...+-
T Consensus         5 pyL~f~g~a~eAi--------~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm   72 (147)
T PRK10148          5 PYLSFAGNCADAI--------AYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIM   72 (147)
T ss_pred             EEEEeCCCHHHHH--------HHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEE
Confidence            45566 4899999        9999999998764431   11                 123334444443    11222


Q ss_pred             EEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCC
Q 016689          177 LTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  250 (384)
Q Consensus       177 l~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  250 (384)
                      +... .+.....++ -.++++.++|+++   ++++| +.|+++..++.+..+ +.++..++||.|+.|.|...+..|
T Consensus        73 ~sD~-~~~~~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         73 MSDA-IPSGKAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             EECC-CCCcCCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEecCCCC
Confidence            2211 111111222 3467888889776   55666 688999988877664 445778999999999998765443

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.66  E-value=0.00017  Score=68.80  Aligned_cols=96  Identities=25%  Similarity=0.393  Sum_probs=69.7

Q ss_pred             ceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc---eEEEEEeeCCCCccEEEEEEecCCCCC--
Q 016689          113 RRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR---YTNAFLGYGPEDSHFVVELTYNYGVDK--  185 (384)
Q Consensus       113 ~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~---~~~~~l~~g~~~~~~~lel~~~~~~~~--  185 (384)
                      ..|+|++..|.  .++.+.        .||+++|||+.....++++..   .+-+..+  |.+   .+.+.-|...+.  
T Consensus       166 ~~IDHl~~nv~~~~md~w~--------~FY~~if~~~~~~~fdi~~p~tgl~Sram~S--p~G---~vrlplN~s~~~~s  232 (363)
T COG3185         166 TAIDHLTHNVKAGQMDTWV--------LFYESLFGFREIQYFDIPGPITGLRSRAMVS--PCG---KVRLPLNESADDKS  232 (363)
T ss_pred             eeechhhhhcchhhHHHHH--------HHHHHHhCccceeeEeccCCcccEEEeeEec--CCC---cEEeecccCCCchh
Confidence            47999998886  899999        999999999998877766532   2223332  212   233433322111  


Q ss_pred             -------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc
Q 016689          186 -------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  221 (384)
Q Consensus       186 -------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~  221 (384)
                             ...|.|+.||+|.++|+-+++++++++|+++...|.
T Consensus       233 qi~efl~~y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         233 QIGEFLREYRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             HHHHHHHHhCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence                   235689999999999999999999999999986554

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.54  E-value=0.0014  Score=53.09  Aligned_cols=113  Identities=24%  Similarity=0.364  Sum_probs=61.9

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--cccCCCceeEEEEEcCC
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~~~~g~g~~hiaf~VdD  331 (384)
                      .+-.|+|.|-+.-++||++.|||++..+..      .+++++..  .....+.+.+.++..  .....-.+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~--~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQ--QKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-T--T--EEEEEEE--TTT-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCC--CCceEEEEecCCccccccccCcceeeEEEEEcCC
Confidence            455899999999999999999999985532      23455543  334455555433322  12223478899999988


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ..++ +.|.++|.++..   -.-+-+|+.+-..+|+|..|.+....+
T Consensus        74 ~~EI-e~LLar~~~~~~---l~kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   74 PKEI-EALLARGAQYDR---LYKGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             HHHH-HHHHHC-S--SE---EEE-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             HHHH-HHHHhcccccce---eEEcCCceEEEEECCCCCEEEEEEcCC
Confidence            5443 455556655321   122333566778899999999987653

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.52  E-value=0.00091  Score=56.54  Aligned_cols=116  Identities=22%  Similarity=0.253  Sum_probs=75.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--c--ccCCCceeEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--E--YDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~--~~~g~g~~hiaf  327 (384)
                      .+.+|++.++|.++...++ +.|||+...+-  .+....++..+      ...+.+...+...  .  ...|+++.-++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~h--rsk~v~l~rQG------~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLF-TALGFQPVARH--RSKDVTLYRQG------DINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHH-CCCCEEEECCE--CCCSEEEEEET------TEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHH-HHhCcceEEec--CCcceEEEEeC------CEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            5889999999988888888 46999988653  23334443222      3344443322211  1  135789999999


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      .|+|..++++++.+.|.+...+|.. ++. -.+.-++-++|.++.|+++.+
T Consensus        80 rV~Da~~A~~rA~~~GA~~~~~~~~-~~e-~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   80 RVDDAAAAYERAVALGAEPVQEPTG-PGE-LNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             EES-HHHHHHHHHHTT--EEEEEEE-TT--BEEEEEE-CCC-EEEEEE--S
T ss_pred             EeCCHHHHHHHHHHcCCcCcccCCC-CCc-EeeeeEEccCCCEEEEEecCC
Confidence            9999999999999999988776532 221 367789999999999999764

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.49  E-value=0.0003  Score=61.94  Aligned_cols=87  Identities=23%  Similarity=0.379  Sum_probs=51.0

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcE--EEEEeecCCCCcceEEEEeccCCCccc------------cC
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY--TIAVMGYGPEDKNAVLELTYNHGVTEY------------DK  318 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~lel~~~~~~~~~------------~~  318 (384)
                      |+|+.+.|+|++++.++|++.+||++......+..+.  .+++++      ...||+.........            ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~------~~YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG------DGYLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S------SSEEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC------CceEEEEEeCCcccccccccceechhhcC
Confidence            6899999999999999998889999987776665222  334443      237777653211110            23


Q ss_pred             CCceeEEEEEcCCHHHHHHHHHHCCCe
Q 016689          319 GNGYAQIAIGTDDVYKTAEAIKLSGGK  345 (384)
Q Consensus       319 g~g~~hiaf~VdDvd~~~~~l~~~G~~  345 (384)
                      +.|...+++.++|+++..+++++.|+.
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            678899999999999999999999986

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.16  E-value=0.0081  Score=50.80  Aligned_cols=118  Identities=18%  Similarity=0.218  Sum_probs=73.9

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC----CCcC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD----KYDI  188 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~----~~~~  188 (384)
                      ..+.||.+.|+|.+++.        .++ +.|||+.+.+...   +-..+| .-|  +  ..+-+.......    ....
T Consensus         8 ~G~dFvEFa~~~~~~l~--------~~~-~~lGF~~~a~hrs---k~v~l~-rQG--~--I~~vln~ep~s~a~~~~~~H   70 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALA--------QLF-TALGFQPVARHRS---KDVTLY-RQG--D--INFVLNSEPDSFAAEFAAQH   70 (139)
T ss_dssp             EEEEEEEEE-SSTTSCH--------HHH-CCCCEEEECCECC---CSEEEE-EET--T--EEEEEEEESTSCHHHHHHHH
T ss_pred             CCeEEEEEecCCHHHHH--------HHH-HHhCcceEEecCC---cceEEE-EeC--C--EEEEEeCCCcchHHHHHHhc
Confidence            47999999999976666        766 5799998765421   112233 323  2  233333221111    1235


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      |++..-++|.|+|.++++++..++|++...+|.  ..+...+.-++.+.|.++-|+++...
T Consensus        71 G~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~--~~~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   71 GPSVCAIAFRVDDAAAAYERAVALGAEPVQEPT--GPGELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             SSEEEEEEEEES-HHHHHHHHHHTT--EEEEEE--ETT-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             CCEEEEEEEEeCCHHHHHHHHHHcCCcCcccCC--CCCcEeeeeEEccCCCEEEEEecCCC
Confidence            789999999999999999999999999877653  22345566789999999999998654

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=95.59  E-value=0.52  Score=38.54  Aligned_cols=96  Identities=20%  Similarity=0.395  Sum_probs=53.5

Q ss_pred             CCHHHHHhhcCCChhHHhhhccCC-EEEeeeeCCC------CceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEE
Q 016689          123 GDLDKTINSLGCGYCRFYTECLGM-KLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  195 (384)
Q Consensus       123 ~Dl~~a~~~~~~~~~~FY~~~LG~-~~~~~~~~~~------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  195 (384)
                      .+.++|+        +||+++||- ++......++      +....+.+..+    +..+-.... + +....++++ .+
T Consensus        11 g~a~eA~--------~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~-~-~~~~~~~~~-sl   75 (116)
T PF06983_consen   11 GNAEEAL--------EFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDG-G-PDFPFGNNI-SL   75 (116)
T ss_dssp             S-HHHHH--------HHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEE-S-TS----TTE-EE
T ss_pred             CCHHHHH--------HHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECC-C-CCCCCCCcE-EE
Confidence            6899999        999999995 3333333332      22333344433    112222222 1 233334443 58


Q ss_pred             EEEECCH---HHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          196 GIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       196 ~~~v~Dv---~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      ++.++|.   ++++++|.+-|-          ... .+..+.|.-|..|.|+
T Consensus        76 ~i~~~~~ee~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   76 CIECDDEEEIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEESSHHHHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             EEEcCCHHHHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence            8899885   456788888775          123 5778999999999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.15  E-value=0.046  Score=43.35  Aligned_cols=92  Identities=18%  Similarity=0.241  Sum_probs=42.2

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC--
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--  330 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd--  330 (384)
                      +..+.|+|+| +++.+||+++||-+..         ..+.+.....++      +.-     +....=++..+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G~D------L~~-----~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQGPD------LTI-----ENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---CC------GSS------TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccCCc------ccc-----CCCcEEeeEEEEEEecCc
Confidence            4568999999 8899999998873321         011111111000      000     0011126678889997  


Q ss_pred             -CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          331 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       331 -Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                       |+.++.+++.+.+  +.-+     .. .+++.+.||+|..|.+
T Consensus        65 ~Dl~~L~~~le~~~--~fid-----Kk-~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHLEEQE--FFID-----KK-EKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHTTTS---EE-------TT--SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHhcccc--eEec-----CC-ceEEEEECCcceEEEe
Confidence             6777888888733  2222     11 5889999999998876

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=95.03  E-value=0.66  Score=37.94  Aligned_cols=96  Identities=25%  Similarity=0.334  Sum_probs=51.4

Q ss_pred             CChHHHHHHHHHhhCCeEe-eeecCCC------CcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC--
Q 016689          261 GDLDRAINFYKKAFGMELL-RKRDNPD------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  331 (384)
Q Consensus       261 ~Dle~s~~FY~~vLG~~~~-~~~~~~~------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD--  331 (384)
                      .+.++|.+||+++||-... .....++      .......+..+    +..+-.... + .....+++ ..+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~-~-~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDG-G-PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEE-S-TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECC-C-CCCCCCCc-EEEEEEcCCHH
Confidence            7999999999999995332 2222221      12222223221    122211111 1 22233344 577777776  


Q ss_pred             -HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          332 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       332 -vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                       +++++++|.+.|-         +.  +.+..++|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~---------~~--~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ---------WF--SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE---------TC--CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC---------cc--ceeEEEEeCCCCEEEeC
Confidence             5567788887774         22  36789999999999886

>PF15067 FAM124: FAM124 family

Probab=94.74  E-value=0.22  Score=45.25  Aligned_cols=106  Identities=11%  Similarity=0.142  Sum_probs=63.4

Q ss_pred             CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc-cCCCceeEEEE
Q 016689          251 EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY-DKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~-~~g~g~~hiaf  327 (384)
                      ..+-.++|.|+  |.+.+++||+-+|+-+......    ++-++.+- ...  +..+++.-..-+... .....-.-+.|
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~FC~F~ly-s~~--~~~iQlsLK~lp~~~~p~p~esavLqF  199 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DFCFFTLY-SQP--GLDIQLSLKQLPPGMSPEPTESAVLQF  199 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----CcEEEEEe-cCC--CeEEEEEeccCCCCCCcccccceEEEE
Confidence            35778899998  9999999999999988754432    13222222 222  455555442221111 11223457899


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEE
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  373 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iEl  373 (384)
                      .|.|+-+++.-|-.--         .|.+ ...+-.+|||||.|-+
T Consensus       200 ~V~~igqLvpLLPnpc---------~PIS-~~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLLPNPC---------SPIS-ETRWQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccCCCCc---------cccc-CCcceeeCCCCCEecc
Confidence            9999887765432111         1222 1336789999999853

>PF15067 FAM124: FAM124 family

Probab=93.57  E-value=0.57  Score=42.69  Aligned_cols=103  Identities=20%  Similarity=0.311  Sum_probs=61.2

Q ss_pred             eeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEec---CCCCCCcC
Q 016689          114 RMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---YGVDKYDI  188 (384)
Q Consensus       114 ~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~---~~~~~~~~  188 (384)
                      .+.-+.+.|+  |.+.++        +||+-+|+-+...+..    ++ .+|.-+..  .+..+.+...   .+..+.. 
T Consensus       128 EilRftly~~~~N~~d~v--------r~Yelil~~~~~~~k~----~F-C~F~lys~--~~~~iQlsLK~lp~~~~p~p-  191 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMV--------RFYELILQREPTQQKE----DF-CFFTLYSQ--PGLDIQLSLKQLPPGMSPEP-  191 (236)
T ss_pred             cEEEEEEEecCCCHHHHH--------HHHHHHhccCcceeeC----Cc-EEEEEecC--CCeEEEEEeccCCCCCCccc-
Confidence            4777889999  999999        9999999988754321    12 23333322  2445555432   2222111 


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEE
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  243 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel  243 (384)
                       .--.-+.|.|.|+..++..|=.--..+.        .+.|  -.+|||||.|-|
T Consensus       192 -~esavLqF~V~~igqLvpLLPnpc~PIS--------~~rW--qT~D~DGNkILL  235 (236)
T PF15067_consen  192 -TESAVLQFRVEDIGQLVPLLPNPCSPIS--------ETRW--QTEDYDGNKILL  235 (236)
T ss_pred             -ccceEEEEEecchhhhcccCCCCccccc--------CCcc--eeeCCCCCEecc
Confidence             1223488999999987755433222221        1222  379999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=89.86  E-value=0.71  Score=36.66  Aligned_cols=92  Identities=16%  Similarity=0.220  Sum_probs=41.3

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      .+.-+.|.|+| +++.        +||+++||-++      +   ....|.....++  ..+         ..+..-++.
T Consensus         5 ~~e~i~LNV~d-~~~~--------~fy~~~f~~~~------~---~~l~f~ea~G~D--L~~---------~~~~twDLe   55 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQ--------SFYQSIFGGQL------P---FFLTFQEAQGPD--LTI---------ENNETWDLE   55 (101)
T ss_dssp             EE-EEEEEE-T--T-----------S--H---HHH------T---TTEEEEE---CC--GSS----------TTSBSSEE
T ss_pred             EEEEEEEeCCC-hhHH--------HHHHhccccCC------C---ceEEEeeccCCc--ccc---------CCCcEEeeE
Confidence            46778999999 8899        99999886221      0   112222211000  000         011123566


Q ss_pred             EEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEE
Q 016689          194 HFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE  242 (384)
Q Consensus       194 hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~ie  242 (384)
                      -+-|.|+   |+.++.+++.+.+.-+-        ....+..+.||++.-+-
T Consensus        56 ~Lkf~V~~~~Dl~~L~~~le~~~~fid--------Kk~k~l~~~Dps~IElW   99 (101)
T PF14507_consen   56 MLKFQVPKDFDLAALKSHLEEQEFFID--------KKEKFLVTSDPSQIELW   99 (101)
T ss_dssp             EEEEEES-S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEE
T ss_pred             EEEEEecCcccHHHHHHHhcccceEec--------CCceEEEEECCcceEEE
Confidence            6888888   68888899888543221        13346778999986553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	384
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		8e-39
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		1e-31
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		1e-27
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-20
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		4e-22
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-11
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		8e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		5e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		7e-10
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		6e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-10
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-10
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-09

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  157 bits (397), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 98/132 (74%), Gaps = 8/132 (6%)
Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I+        FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSID--------FYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53
Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113
Query: 234 EDPDGYKFELLE 245
           EDPDGYK EL+E
Sbjct: 114 EDPDGYKIELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 84/126 (66%)
Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           L   MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 372
           V +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K  
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122
Query: 373 FVDNLD 378
            ++  D
Sbjct: 123 LIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 82/132 (62%), Gaps = 13/132 (9%)
Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           RRMLH + RVGDLD++I        +FYTE LGMK+LRK D+PED+YT  FLGYGPE S 
Sbjct: 7   RRMLHTMIRVGDLDRSI--------KFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS 58
Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            V+ELTYNYGV  Y     +GH  I VEDV + V  ++     +  E       +  +AF
Sbjct: 59  TVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAF 113
Query: 233 IEDPDGYKFELL 244
           + DPDGY  ELL
Sbjct: 114 VVDPDGYYIELL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           +   M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+G
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW 369
           VT Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGY 120

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 126/285 (44%), Gaps = 45/285 (15%)
Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-----------RYTN 161
           RR LH V++VG+  +T         RFY + LGMK+LR  +  E            +++ 
Sbjct: 26  RRALHFVFKVGNRFQT--------ARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSK 77
Query: 162 AFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG 221
             +G+GPED HFV ELTYNYGV  Y +G  F   GI +       +  K +         
Sbjct: 78  TMVGFGPEDDHFVAELTYNYGVGDYKLGNDF--MGITLASSQAVSNARKLE--------W 127
Query: 222 PVKGGNTVIAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR 280
           P+      +   E P GYKF L  R  P  +P+ +V L V DL +++N++    GM++  
Sbjct: 128 PLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYE 187
Query: 281 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK 340
                D +   A++GY   D    LEL    G  ++    G    +    ++    + +K
Sbjct: 188 N----DEEKQRALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLEDLMK 241
Query: 341 LSGGKITREPGPLPGINT------KITACLDPDGWKSVFVDNLDF 379
               KI     PL  ++T      ++    DPDG +  FV +  F
Sbjct: 242 RENQKILT---PLVSLDTPGKATVQVVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 38/156 (24%)
Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----PE 169
           +   + R+ D  K+++        FYT  LG+ LL+K D P  +++  FL Y      P+
Sbjct: 32  LQQTMLRIKDPKKSLD--------FYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83
Query: 170 DS----------HFVVELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVK 210
           D              +ELT+N+G +  +  +         GFGH GIAV DV       +
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFE 143
Query: 211 AKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELL 244
             G K  ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 144 ELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 219 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 275
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 276 MELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 315
           + LL+K D P  K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAY--EDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDET 112
Query: 316 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 367
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 113 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 168
Query: 368 GW 369
           G+
Sbjct: 169 GY 170

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
           +   + RV D  K+++        FYT  LGM L++K D P  +++  FL Y  ED + +
Sbjct: 31  LQQTMLRVKDPKKSLD--------FYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDI 80
Query: 175 -----------------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDL 208
                            +ELT+N+G +  +  +         GFGH GIAV DV      
Sbjct: 81  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 140
Query: 209 VKAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELL 244
            +  G K  ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 141 FEELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 46/190 (24%)
Query: 219 EPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 275
           EP P  GG T    ++   D D    + L        L Q MLRV D  ++++FY +  G
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 276 MELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 315
           M L++K D P  K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 316 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 367
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 167
Query: 368 G-WKSVFVDN 376
           G W  +   N
Sbjct: 168 GYWIEILNPN 177

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
           +   + RV D  K+++        FYT  LGM L++K D P  +++  FL Y  ED + +
Sbjct: 35  LQQTMLRVKDPKKSLD--------FYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDI 84
Query: 175 -----------------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDL 208
                            +ELT+N+G +  +  +         GFGH GIAV DV      
Sbjct: 85  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 144
Query: 209 VKAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELL 244
            +  G K  ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 145 FEELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 46/195 (23%)
Query: 214 GKVTREPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFY 270
           G    EP P  GG T    ++   D D    + L        L Q MLRV D  ++++FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 271 KKAFGMELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGV 313
            +  GM L++K D P  K+++  + Y  EDKN                 A LELT+N G 
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGT 110
Query: 314 TE-----YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITA 362
            +     Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +  
Sbjct: 111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAF 166
Query: 363 CLDPDG-WKSVFVDN 376
             DPDG W  +   N
Sbjct: 167 IQDPDGYWIEILNPN 181

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
           +   + RV D  K+++        FYT  LGM L++K D P  +++  FL Y  ED + +
Sbjct: 31  LQETMLRVKDPKKSLD--------FYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDI 80
Query: 175 -----------------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDL 208
                            +ELT+N+G +  +  +         GFGH GIAV DV      
Sbjct: 81  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 140
Query: 209 VKAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELL 244
            +  G K  ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 141 FEELGVKFVKKPDDGKMKG----LAFIQDPDGYWIQIL 174

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 80/192 (41%), Gaps = 50/192 (26%)
Query: 219 EPGPVKGGNTVIAFIE-----DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKA 273
           EP P  GG T  A +      DP    F L E           MLRV D  ++++FY + 
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFLLQE----------TMLRVKDPKKSLDFYTRV 51
Query: 274 FGMELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE- 315
            GM L++K D P  K+++  + Y  EDKN                 A LELT+N G  + 
Sbjct: 52  LGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD 109
Query: 316 ----YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLD 365
               Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    D
Sbjct: 110 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQD 165
Query: 366 PDG-WKSVFVDN 376
           PDG W  +   N
Sbjct: 166 PDGYWIQILNPN 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-60
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-39
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	6e-60
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-41
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-42
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-33
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-36
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	9e-24
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	4e-04
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-35
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-10
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	3e-10
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-33
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	4e-23
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-31
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	4e-20
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-30
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-19
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	1e-29
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	6e-21
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	6e-27
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-20
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	8e-25
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-14
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-24
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-18
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-22
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-22
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	5e-16
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-20
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-17
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-19
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	8e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-19
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-09
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	7e-18
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-16
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	4e-09
3ghj_A	141	Putative integron gene cassette protein; integron	5e-16
3ghj_A	141	Putative integron gene cassette protein; integron	9e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	3e-15
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-15
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	4e-10
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	3e-15
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	4e-15
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	8e-09
3huh_A	152	Virulence protein STM3117; structural genomics, ny	4e-15
3huh_A	152	Virulence protein STM3117; structural genomics, ny	6e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	6e-15
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-08
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-13
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	8e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-13
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-13
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	6e-08
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-13
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-12
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	5e-13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-09
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	8e-13
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-12
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-12
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-10
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-12
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-12
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-04
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	3e-12
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-12
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	3e-12
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	3e-12
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	9e-08
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	3e-11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	5e-11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	7e-04
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	8e-11
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	1e-10
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	4e-10
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	7e-10
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-10
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	5e-10
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-05
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	9e-10
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	3e-09
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-09
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	7e-09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	3e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	7e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	7e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	8e-08
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	7e-05
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	5e-07
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	5e-07
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	1e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	6e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-06
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	4e-06
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	5e-05
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-05
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	5e-05
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-05
1xy7_A	166	Unknown protein; structural genomics, protein stru	9e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-04
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	8e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  191 bits (486), Expect = 2e-60
 Identities = 69/151 (45%), Positives = 84/151 (55%), Gaps = 13/151 (8%)

Query: 112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS 171
            RRMLH + RVGDLD++I        +FYTE LGMK+LRK D+PED+YT  FLGYGPE S
Sbjct: 6   SRRMLHTMIRVGDLDRSI--------KFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMS 57

Query: 172 HFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 231
             V+ELTYNYGV  Y     +GH  I VEDV + V  ++     +  E          +A
Sbjct: 58  STVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMA 112

Query: 232 FIEDPDGYKFELLERGPTPEPLCQVMLRVGD 262
           F+ DPDGY  ELL      E     M   G 
Sbjct: 113 FVVDPDGYYIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  135 bits (342), Expect = 5e-39
 Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 5/130 (3%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
             M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+GVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 374
            Y     Y  IAIG +DV +    ++     I  E          +   +DPDG+    +
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYYIELL 125

Query: 375 DNLDFLKELE 384
           +    +++ E
Sbjct: 126 NEKTMMEKAE 135

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  189 bits (482), Expect = 6e-60
 Identities = 74/140 (52%), Positives = 98/140 (70%), Gaps = 8/140 (5%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I         FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSI--------DFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query: 234 EDPDGYKFELLERGPTPEPL 253
           EDPDGYK EL+E       L
Sbjct: 114 EDPDGYKIELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  140 bits (356), Expect = 3e-41
 Identities = 62/129 (48%), Positives = 85/129 (65%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
             MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 374
           +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   +
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELI 124

Query: 375 DNLDFLKEL 383
           +  D  + L
Sbjct: 125 EEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  145 bits (367), Expect = 3e-42
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 39/189 (20%)

Query: 94  PTSNTVTEQNVLDWVKS-----DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKL 148
           P S+ +T++                 +   + R+ D  K++         FYT  LG+ L
Sbjct: 6   PASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSL--------DFYTRVLGLTL 57

Query: 149 LRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNYGVD-----KYDI 188
           L+K D P  +++  FL Y  ++                   +ELT+N+G +      Y  
Sbjct: 58  LQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHN 117

Query: 189 G----TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 244
           G     GFGH GIAV DV       +  G K  ++P    G    +AFI+DPDGY  E+L
Sbjct: 118 GNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEIL 175

Query: 245 ERGPTPEPL 253
                   +
Sbjct: 176 NPNKIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  121 bits (304), Expect = 4e-33
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 37/179 (20%)

Query: 219 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 275
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 276 MELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE----- 315
           + LL+K D P  K+++  + Y  ++               + A LELT+N G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 316 YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 370
           Y  GN    G+  I I   DVY   +  +  G K  ++P    G    +    DPDG+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 171

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  129 bits (327), Expect = 1e-36
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 14/145 (9%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           ++ H+   V  +   +         FY   L +KLL   D+P      AFL  G      
Sbjct: 8   KLDHIGIAVTSIKDVL--------PFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIEL 59

Query: 174 VVELTYNYGVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKV-TREPGPVKGGNTVI 230
           +  L+    + K+    G G  H  I V+ + + +  VK  G ++   EP P   G   +
Sbjct: 60  LEPLSEESPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-V 118

Query: 231 AFI--EDPDGYKFELLERGPTPEPL 253
           AF+      G  +E  E+    E L
Sbjct: 119 AFLHPRSARGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 95.3 bits (237), Expect = 9e-24
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 15/132 (11%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            + + V  +   + FY  +  ++LL   D P     IA +  G      +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 315 EYDKGNGYA--QIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKS 371
           ++ +  G     IAIG   + +  + +K +G + I  EP P               G + 
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVP------------GARGAQV 118

Query: 372 VFVDNLDFLKEL 383
            F+        L
Sbjct: 119 AFLHPRSARGVL 130

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE-------- 245
           H GIAV  +   +                +      IAF+E  +  K ELLE        
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES-KIELLEPLSEESPI 69

Query: 246 ---RGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 281
                   E +  + + V  ++  I   K+  G++++  
Sbjct: 70  AKFIQKRGEGIHHIAIGVKSIEERIQEVKEN-GVQMIND 107

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  130 bits (329), Expect = 1e-35
 Identities = 51/259 (19%), Positives = 76/259 (29%), Gaps = 40/259 (15%)

Query: 122 VGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTY 179
             D             +FYT   G        +P     Y+ A L         V  +  
Sbjct: 40  TTDQSAAK--------KFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAP 85

Query: 180 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 239
                   +   +  + IAV+DV   VD V   GG+V      + G    ++FI DP G 
Sbjct: 86  MPPGAPEGMPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGA 143

Query: 240 KFELLERGP--------TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTI 291
              L +               L    L     D A+ FY+   G+            Y +
Sbjct: 144 AVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRV 203

Query: 292 AVMGYGPEDKNAVLELTYNHGVTEYDKGNG--YAQIAIGTDDVYKTAEAIKLSGGKITRE 349
              G                G  E        +  +    DD   TA     +GG++  E
Sbjct: 204 LKAGDAEV-----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAE 252

Query: 350 PGPLPGINTKITACLDPDG 368
           P  +P +  +     DP G
Sbjct: 253 PADIPSV-GRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 10/113 (8%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           L+  D   A  FY   FG         P     Y++A +         V  +        
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAP 91

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                 +    I  DDV    + +   GG++      +     +++   DP G
Sbjct: 92  EGMPPIWN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 59.2 bits (143), Expect = 3e-10
 Identities = 25/150 (16%), Positives = 46/150 (30%), Gaps = 22/150 (14%)

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT 160
            +++   + ++   ++         D  +         FY   +G+            Y 
Sbjct: 151 NRHIGATLVNETGTLIWNELLTDKPDLAL--------AFYEAVVGLTHSSMEIAAGQNYR 202

Query: 161 NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI--AVEDVAKTVDLVKAKGGKVTR 218
               G                G  +  +     H+ +  AV+D   T     A GG+V  
Sbjct: 203 VLKAGDAEV-----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIA 251

Query: 219 EPGPVKGGNTVIAFIEDPDGYKFELLERGP 248
           EP  +       A + DP G  F +L+  P
Sbjct: 252 EPADIPSV-GRFAVLSDPQGAIFSVLKAAP 280

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  120 bits (302), Expect = 3e-33
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 13/138 (9%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R+ HV   V DL+K           FY   LG ++     +PE   +  F+  G     
Sbjct: 4   GRLNHVAIAVPDLEKAA--------AFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKME 55

Query: 173 FVVELTYNYGVDKY---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
            +  L  +  +  +   +   G  H  I V+++   V  +K K  +   E   +      
Sbjct: 56  LLHPLGLDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP 115

Query: 230 IAFI--EDPDGYKFELLE 245
           + F+  +D  G   EL +
Sbjct: 116 VIFLHPKDCGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 92.9 bits (231), Expect = 4e-23
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            V + V DL++A  FYK   G ++      P++  ++  +  G      +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 315 EY---DKGNGYAQIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACL--DPDG 368
            +   +K  G   I I  D++      +K    + ++ E          +      D  G
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAH-GKPVIFLHPKDCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  113 bits (285), Expect = 6e-31
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 18/141 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + + HV   V D DK+          FY   LG +++R+   P+       L  G  +  
Sbjct: 4   KAVHHVALIVSDYDKSY--------EFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELE 55

Query: 173 F----VVELTYNYGVDKYDI---GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 225
                + +  Y    ++        G  H    VEDV  +   + A G  +  E      
Sbjct: 56  IFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDD 113

Query: 226 GN-TVIAFIEDPDGYKFELLE 245
                +AF  DPDG   EL E
Sbjct: 114 YTGKKMAFFFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 84.4 bits (209), Expect = 4e-20
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 16/124 (12%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V L V D D++  FY    G E++R+   P        +  G    +  LE+  N     
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDS 64

Query: 316 Y-----------DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 364
                        +  G   +A   +DV  + + +   G ++            K+    
Sbjct: 65  NYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 365 DPDG 368
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  111 bits (280), Expect = 3e-30
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 12/134 (8%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + + HV     +   T          FY E LG ++LR+   PE       L  G ++  
Sbjct: 4   KEIHHVAINASNYQATK--------NFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELE 55

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV-IA 231
                        Y    G  H    VE + + +  +  +G  +  EP  V       + 
Sbjct: 56  I-FISDQFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMT 112

Query: 232 FIEDPDGYKFELLE 245
           F  DPDG   EL E
Sbjct: 113 FFFDPDGLPLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 81.3 bits (201), Expect = 5e-19
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH---G 312
           V +   +     NFY +  G E+LR+   P+       +  G    +  LE+  +     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG----SQELEIFISDQFPA 64

Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-PGINTKITACLDPDG 368
              Y +  G   +A   + + +    +   G  I  EP  +      K+T   DPDG
Sbjct: 65  RPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  110 bits (277), Expect = 1e-29
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 22/141 (15%)

Query: 114 RMLHVVYR--VGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS 171
           ++L ++ R  V DL+  +         FY E L   +  + +IP+     A +      +
Sbjct: 4   KILQILSRLYVADLNPAL--------EFYEELLETPVAMRFEIPQTGVELAQISTILLIA 55

Query: 172 HFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 231
                     G ++             V+ + K    ++  G ++ R P  V  G     
Sbjct: 56  ----------GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--M 103

Query: 232 FIEDPDGYKFELLERGPTPEP 252
            +   DG   E +E       
Sbjct: 104 TVRHSDGSVIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 87.2 bits (216), Expect = 6e-21
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 12/113 (10%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
             L V DL+ A+ FY++     +  + + P     +A +         +L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLIA---GSEE 59

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             K     Q     D + K    ++ +G +I R P  +P            DG
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMT--VRHSDG 110

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  102 bits (257), Expect = 6e-27
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 18/139 (12%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           ++ H+ Y V ++D  +        + +     ++          +    F+  G     +
Sbjct: 7   KVHHIGYAVKNIDSAL--------KKFKRLGYVEESEVVRDEVRKVYIQFVING----GY 54

Query: 174 VVELTYNYGVDK-----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GN 227
            VEL    G D         G+   H    VED+ K+++ +   G  + ++        N
Sbjct: 55  RVELVAPDGEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDN 114

Query: 228 TVIAFIEDPDGYKFELLER 246
             +AF+   D    ELLE+
Sbjct: 115 RKVAFLFSTDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 85.2 bits (211), Expect = 2e-20
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 10/119 (8%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           +   V ++D A+  +K+   +E      +   K  I  +  G       +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDS 66

Query: 316 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA-CLDPDG 368
                  KG+    I    +D+ K+ E +   G  + ++    P I+ +  A     D 
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 98.0 bits (244), Expect = 8e-25
 Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 20/148 (13%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--------RYTNAFL 164
           R++ H+   V D+  +          FY   LG+  L   ++P          +  N   
Sbjct: 18  RKVHHIALNVQDMQASR--------YFYGTILGLHELTDDEVPATLTELVASGKVANFIT 69

Query: 165 GYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--VAKTVDLVKAKGGKVTREPGP 222
             G     F          +     T   H    ++     + V ++      +    GP
Sbjct: 70  PDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGP 127

Query: 223 VKGGNTVIAFIEDPDGYKFELLERGPTP 250
           V        +  DPDG+  E+       
Sbjct: 128 VTRPTGRGVYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 68.0 bits (166), Expect = 5e-14
 Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 8/121 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNP--------DYKYTIAVMGYGPEDKNAVLEL 307
           + L V D+  +  FY    G+  L   + P          K    +   G          
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 308 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 367
                            +A   D          +   KI    GP+     +     DPD
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPD 142

Query: 368 G 368
           G
Sbjct: 143 G 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 96.3 bits (239), Expect = 3e-24
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 13/141 (9%)

Query: 108 VKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYG 167
            +S+  R+      V D  K           FYT  LG  +     +  DR+        
Sbjct: 20  FQSNAMRIHLTNVFVDDQAKAE--------SFYTGKLGFLVKADVPVGADRWLTVVSPEA 71

Query: 168 PEDSHFVVELTYNYGVDKYD---IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK 224
           P+ +  ++E + +  V  +    +  G      AV+D+A   + + A G + T+EP  + 
Sbjct: 72  PDGTQLLLEPSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMG 131

Query: 225 GGNTVIAFIEDPDGYKFELLE 245
               V A ++D  G   +L++
Sbjct: 132 PV--VTAILDDTCGNLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 5/119 (4%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           +    + V D  +A +FY    G  +         ++   V    P+    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 313 VTEYDK---GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           VT + +    +G    +   DD+    E +   G + T+EP  +           D  G
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 90.8 bits (225), Expect = 2e-22
 Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           ++ HV     +L++          +FY    G       +     + + FL +   +   
Sbjct: 3   KIEHVALWTTNLEQMK--------QFYVTYFGATANDLYENKTKGFNSYFLSF---EDGA 51

Query: 174 VVELTYNYGVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNT 228
            +E+     V         G+ H  I+    E V +  + ++  G  +  EP    G   
Sbjct: 52  RLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGY 110

Query: 229 VIAFIEDPDGYKFEL 243
             + + DP+G + E+
Sbjct: 111 YESVVLDPEGNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 75.0 bits (184), Expect = 1e-16
 Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V L   +L++   FY   FG       +N    +    + +   +  A LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRTDVTG 63

Query: 316 YDKGN--GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
              G   G+A IAI     + V +  E ++  G  I  EP    G     +  LDP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 91.4 bits (227), Expect = 2e-22
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 28/151 (18%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE--- 169
            RM +V   V  LD  I         F+ E +G+ L  + ++ E  +     G G +   
Sbjct: 10  LRMDNVSIVVESLDNAI--------SFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVE 59

Query: 170 -------DSHFVVELTYNYGVDKYDI-------GTGFGHFGIAVEDVAKTVDLVKAKGGK 215
                  D H  +EL+                   G+      VED+ + V  +   G +
Sbjct: 60  IAMMVTPDGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE 119

Query: 216 VTREPGPVKGGNTVIAFIEDPDGYKFELLER 246
           +  E       +  + +I   +G    L E 
Sbjct: 120 LVGEV-VQYENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 73.7 bits (181), Expect = 5e-16
 Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 22/131 (16%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAV 304
           V + V  LD AI+F++   G+ L  + +                  IA+M     D ++ 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP--DGHSR 71

Query: 305 LELT-YNHGVTEYDKGN------GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGIN 357
           +EL+ +    T  D         GY ++    +D+ +    +   G ++  E       +
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-S 130

Query: 358 TKITACLDPDG 368
            ++      +G
Sbjct: 131 YRLCYIRGVEG 141

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 85.1 bits (210), Expect = 4e-20
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVE 176
              D++ +          F+ + LG ++  +R  P++ +   +L     D          
Sbjct: 12  YCFDINVSQ--------SFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKS 59

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIA-- 231
             +  G  ++ +G+G  +F   V D+      V                 + G+++    
Sbjct: 60  RKWLSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK 118

Query: 232 --FIEDPDGYKFELLE 245
              ++ PDGY F   +
Sbjct: 119 QFMVQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 76.6 bits (188), Expect = 4e-17
 Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 8/129 (6%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
            L   D++ + +F+    G E+  +R + ++ Y          +  A     +  G  E+
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEF 69

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP-------GINTKITACLDPDGW 369
             G+G         D+    + +  S                       K      PDG+
Sbjct: 70  PLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGY 128

Query: 370 KSVFVDNLD 378
              F  ++ 
Sbjct: 129 LFRFCQDIH 137

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 83.4 bits (206), Expect = 2e-19
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 249 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 308
               +    +   D DRA  FY+ AFG  +    + PD  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 309 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
            N G+ +  +      + +  + +    E I+  GGK      P+  +        D +G
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 78.4 bits (193), Expect = 8e-18
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 122 VGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 181
             D D+           FY +  G  +    +IP+  Y+    G   E          N 
Sbjct: 33  FDDGDRAR--------AFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYING 81

Query: 182 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 241
           G+ +    T      + VE +   ++ +++ GGK      PV G     A+  D +G   
Sbjct: 82  GMMQRGEVTTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVV 139

Query: 242 ELLERG 247
            L E  
Sbjct: 140 GLWETA 145

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 82.1 bits (203), Expect = 5e-19
 Identities = 24/142 (16%), Positives = 38/142 (26%), Gaps = 22/142 (15%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             ++       DLD            FY +  G++++ K           F   G +   
Sbjct: 7   SAIMETALYADDLDAAE--------AFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLL 53

Query: 173 FVVE----LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKG 225
                                 G GHF        +V +     +A    V        G
Sbjct: 54  LFDPQESSRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNG 113

Query: 226 GNTVIAFIEDPDGYKFELLERG 247
             +V  +I DP G   E+ E  
Sbjct: 114 SYSV--YIRDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 21/118 (17%), Positives = 31/118 (26%), Gaps = 10/118 (8%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAV----LELTYNH 311
             L   DLD A  FY+  FG+E++ K         +     G +               +
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRADAN 66

Query: 312 GVTEYDKGNGYAQIAIGTDDVYKTAEAIK-LSGGKITREPGPLPGINTKITACLDPDG 368
                    G        DD  +  E        +I  E        +      DP G
Sbjct: 67  NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAG 124

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 78.4 bits (193), Expect = 7e-18
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 20/136 (14%)

Query: 116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 175
           + +    G LD+ I        RFY E L +K + +     + Y     G     + + +
Sbjct: 13  IRIARPTGQLDEII--------RFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHL 61

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVI 230
           E T   G     +          V    ++A     +K  G +      P    GG T  
Sbjct: 62  EFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT-- 119

Query: 231 AFIEDPDGYKFELLER 246
             IEDPDG++   +  
Sbjct: 120 --IEDPDGWRIVFMNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 71.1 bits (174), Expect = 4e-15
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 259 RVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK 318
             G LD  I FY++   ++ + +    +  Y   + G      +  LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLP--HADYHLEFTQYEGGSTAPV 74

Query: 319 GNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF 373
            +  + +        ++      +K  G +      P            DPDGW+ VF
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIE--DPDGWRIVF 130

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 74.5 bits (183), Expect = 2e-16
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 175
           + V   VG  ++           FY E +GM+ + K +  + R    +   G ++ H  V
Sbjct: 14  VQVAAPVGCEEEAR--------AFYGETIGMEEIPKPEELKKRGG-CWFKCGNQEIHIGV 64

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 235
           E  +N             H    V  + +    +  +G +V  +            ++ D
Sbjct: 65  EQNFNPA--------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSD 113

Query: 236 PDGYKFELLER 246
           P G + E +E 
Sbjct: 114 PFGNRIEFMEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 53.3 bits (128), Expect = 4e-09
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
           QV   VG  + A  FY +  GME + K +    +          E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           +       A  A     + +  + +   G ++  +    P +        DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFG 116

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 73.5 bits (181), Expect = 5e-16
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 27/135 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + +  V  +V +L+K+         +FYTE LG +          R+   ++  G     
Sbjct: 27  KGLFEVAVKVKNLEKSS--------QFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMV 75

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVI 230
            + E   N+            HF   VE  ++      +++KG  V    GPV       
Sbjct: 76  VLQEEKENWQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQA 123

Query: 231 A--FIEDPDGYKFEL 243
              +  DP+G+  E 
Sbjct: 124 VSLYFADPNGHALEF 138

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 44.2 bits (105), Expect = 9e-06
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 15/115 (13%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V ++V +L+++  FY +  G E         +             +  ++ L       E
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRW------NFLWVSGRAGMVVL------QE 79

Query: 316 YDKGNGYAQIAIG--TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             +       +      ++    +A++  G  +   P     +        DP+G
Sbjct: 80  EKENWQQQHFSFRVEKSEIEPLKKALESKGVSV-HGPVNQEWMQAVSLYFADPNG 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 71.1 bits (174), Expect = 3e-15
 Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 20/134 (14%)

Query: 115 ML----HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPE 169
           M+    H+ + V DL++          R        + +   D  +   +   F   G  
Sbjct: 1   MIEGLSHMTFIVRDLERMT--------RILEGVFDAREVYASDTEQFSLSREKFFLIGD- 51

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
                + +    G    +       F I   D  +  + V   G  +      V+G    
Sbjct: 52  -----IWVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRS 106

Query: 230 IAFIEDPDGYKFEL 243
           I F  D D + FEL
Sbjct: 107 IYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 8/114 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNHGVT 314
           +   V DL+R     +  F    +   D   +          G       + +    G  
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGEK 61

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             ++   +    I   D  + AE +   G  + R P P      +     D D 
Sbjct: 62  LAERSYNHIAFKIDDADFDRYAERVGKLGLDM-RPPRPRVEGEGRSIYFYDDDN 114

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 75.8 bits (185), Expect = 3e-15
 Identities = 43/289 (14%), Positives = 78/289 (26%), Gaps = 59/289 (20%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           HV     D               ++  LG  L  + D+      +A L        F+  
Sbjct: 34  HVELWCADAASAA--------GRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFT 85

Query: 177 LTYNYGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE 219
             Y +G D                     G       + V D         A G +    
Sbjct: 86  APYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFG 145

Query: 220 PGPVKG----------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVML 258
           P  +            G+ V+ ++  PDG         FE +      +        ++ 
Sbjct: 146 PVDLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVG 205

Query: 259 RVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYG-PEDKNAVLELTYNHGVT--- 314
            V +L  A  ++    G     +    D     + +      + +  + L  N  V    
Sbjct: 206 NVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTK 265

Query: 315 ---------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP 354
                    ++  G G   +A+ +DDV +T   ++        E    P
Sbjct: 266 RRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP 314

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 71.1 bits (174), Expect = 4e-15
 Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 21/139 (15%)

Query: 113 RRML-HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS 171
           + ML HV   V  L+++I         F+   LG                    Y    +
Sbjct: 18  QGMLHHVEINVDHLEESI--------AFWDWLLGELGYEDYQSWSR-----GKSYKHGKT 64

Query: 172 HFVVELTYNYGVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVK 224
           + V   T +       +   TG  H        E V +    +K +G  +  E       
Sbjct: 65  YLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAG 124

Query: 225 GGNTVIAFIEDPDGYKFEL 243
           G N    F EDP+  K E+
Sbjct: 125 GPNHYAVFCEDPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 53.0 bits (127), Expect = 8e-09
 Identities = 20/120 (16%), Positives = 32/120 (26%), Gaps = 12/120 (10%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V + V  L+ +I F+    G        +           Y       V   T +   T 
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDRFQTP 78

Query: 316 YDKGN--GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDG 368
                  G   +A      + V +  + +K  G  I  E            A    DP+ 
Sbjct: 79  TFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 71.2 bits (174), Expect = 4e-15
 Identities = 27/133 (20%), Positives = 41/133 (30%), Gaps = 16/133 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R+ H+V  V D+  TI        RFY E LG   +  +           L +G +  +
Sbjct: 22  DRIDHLVLTVSDISTTI--------RFYEEVLGFSAVTFKQ------NRKALIFGAQKIN 67

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA- 231
              +                    I    +   V  +   G  +   P    G    I  
Sbjct: 68  LHQQEMEFEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMS 127

Query: 232 -FIEDPDGYKFEL 243
            +I DPDG   E+
Sbjct: 128 IYIRDPDGNLIEI 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 56.6 bits (136), Expect = 6e-10
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           ++L V D+   I FY++  G   +  + N         + +G +  N   +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA------LIFGAQKINLHQQEMEFEPKAS 80

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 368
                      I +  +      I  +G  I   P    G   +I +    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 69.7 bits (171), Expect = 6e-15
 Identities = 26/134 (19%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
            + H+   V D+             F  +  G+              NAF      D  F
Sbjct: 3   GIKHLNLTVADVVAAR--------EFLEKYFGLTC-------SGTRGNAFAVMRDND-GF 46

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 230
           ++ L     V          H G      E V K    +K  G     EP       T  
Sbjct: 47  ILTLMKGKEVQY----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF- 99

Query: 231 AFIEDPDGYKFELL 244
            ++E P G+  E++
Sbjct: 100 -YVEAPGGFTIEVM 112

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           + L V D+  A  F +K FG+     R N              ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 370
           Y K           + V K  + +K  G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 73.1 bits (179), Expect = 1e-14
 Identities = 38/239 (15%), Positives = 69/239 (28%), Gaps = 42/239 (17%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H+     + ++           FY   LG++ ++     +D      L YG +      E
Sbjct: 33  HISMVTKNANENN--------HFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTE 83

Query: 177 LTYNY--GVDKYDIGTG-FGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVI 230
           L++     V +   GT      G+ V          +  +     V             +
Sbjct: 84  LSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPAL 141

Query: 231 AFIEDPDGYKFELLERGPTPEPLCQ------------------VMLRVGDLDRAINFYKK 272
            F ED +G +  LL          +                  V L V  LD+  +   +
Sbjct: 142 QF-EDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTE 200

Query: 273 AFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD 331
            FG   + + D        A+      +    + + Y  G TE         +AI   +
Sbjct: 201 IFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKN 253

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 16/135 (11%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           HV   V DLD +         R+YTE L  K L +     D  + A        S  + E
Sbjct: 8   HVSLTVRDLDISC--------RWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLRE 57

Query: 177 LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
                     +   G  H   +V    D+    + +   G      P        ++AF 
Sbjct: 58  HDGGGTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAG--AAFTPTQELPFGWILAF- 114

Query: 234 EDPDGYKFELLERGP 248
            D D    E +    
Sbjct: 115 RDADNIALEAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 10/117 (8%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY--NHGV 313
           V L V DLD +  +Y +    + L +       +   V+  G       + L      G 
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGG-----LSIVLREHDGGGT 63

Query: 314 TEYDKGN-GYAQIAIGTDDVYKTAEAI-KLSGGKITREPGPLPGINTKITACLDPDG 368
             +D+   G   ++   + +        +L+       P         I A  D D 
Sbjct: 64  DLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADN 119

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 19/131 (14%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + + H+   V DL K++         F+ E LG+ L  + +      T A+L  G     
Sbjct: 3   QSLNHLTLAVSDLQKSV--------TFWHELLGLTLHARWN------TGAYLTCGDLWVC 48

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
              +      V   +       F +A ED       ++  G  VT        G +   +
Sbjct: 49  LSYDEARQ-YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--Y 103

Query: 233 IEDPDGYKFEL 243
             DPDG+K EL
Sbjct: 104 FLDPDGHKLEL 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDN 284
           + L V DL +++ F+ +  G+ L  + + 
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 69.5 bits (170), Expect = 2e-13
 Identities = 46/287 (16%), Positives = 86/287 (29%), Gaps = 60/287 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R  HV  RV D+ K +          Y E LG+  + + D  + R    +L    E   
Sbjct: 6   MRPGHVQLRVLDMSKAL--------EHYVELLGLIEMDRDD--QGR---VYLKAWTEVDK 52

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNT 228
           F + L       + D   G    G  V   + + +    + A G  V + P G +     
Sbjct: 53  FSLVLR------EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR 105

Query: 229 VIAFIEDPDGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRA 266
            + F + P G+ FEL                        +G         ++   +L   
Sbjct: 106 RVRF-QAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPAT 164

Query: 267 INFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA 326
            + + K  G  L  +  + +       +    +  +             + +      ++
Sbjct: 165 YDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAF--------IHHPEKGRLHHVS 216

Query: 327 IGT---DDVYKTAEAIKLSGGKITREPGP-LPGINTKITACLDPDGW 369
                 +D+ + A+ I ++   I   P          I    DP G 
Sbjct: 217 FHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 25/137 (18%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPE 169
            R  H +    +L  T           +T+ LG  L    +            FL     
Sbjct: 149 VRFDHALMYGDELPAT--------YDLFTKVLGFYL---AEQVLDENGTRVAQFLSLST- 196

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGG 226
            +H V           +       H    +   ED+ +  DL+      +   P      
Sbjct: 197 KAHDVA-------FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLT 249

Query: 227 NTVIAFIEDPDGYKFEL 243
           +    +  DP G + E+
Sbjct: 250 HGKTIYFFDPSGNRNEV 266

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 66.0 bits (161), Expect = 2e-13
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVV 175
           H+   V DL+KT          F       + +              F           +
Sbjct: 7   HITLIVKDLNKTT--------AFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------L 52

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 235
            +    G    +       F I  E+V +  + +KA G ++ +   P   G     +  D
Sbjct: 53  WICIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYD 111

Query: 236 PDGYKFEL 243
            D + FEL
Sbjct: 112 FDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 50.2 bits (120), Expect = 6e-08
 Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 12/116 (10%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNHGVT 314
           + L V DL++   F +  F  E +    +  +                  + +     + 
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIA----GLWICIMEGDSLQ 63

Query: 315 EYDKGNGYAQIAIGT--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           E      Y  IA     ++V +  E IK  G ++ +   P      +     D D 
Sbjct: 64  E----RTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 64.9 bits (158), Expect = 5e-13
 Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 7/117 (5%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNH 311
               +  V D++R+ +FY+   G+++L   D   +  +      +        +  T + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL--EDFGSFVLFETGFAIHEGRSLEETIWRTSSD 66

Query: 312 GVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
              +   G     +     DV    + I     ++            ++    DPDG
Sbjct: 67  --AQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAW-GQRVFRFYDPDG 119

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 63.8 bits (155), Expect = 1e-12
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R ++ +  V D++++          FY + LG+K+L         +     G+   +   
Sbjct: 8   RFVNPIPFVRDINRSK--------SFYRDRLGLKILED----FGSFVLFETGFAIHEGRS 55

Query: 174 VVELTYNYGVDKYDI-GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
           + E  +    D  +  G           DV      +     ++         G  V   
Sbjct: 56  LEETIWRTSSDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-R 113

Query: 233 IEDPDGYKFELLE 245
             DPDG+  E+ E
Sbjct: 114 FYDPDGHAIEVGE 126

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 65.0 bits (158), Expect = 5e-13
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 17/134 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           +++  +   +GDL+ +         RFY E  G        +  +     +   G   + 
Sbjct: 4   QQVAVITLGIGDLEASA--------RFYGEGFGWAP-----VFRNPEIIFYQMNGFVLAT 50

Query: 173 FVVE-LTYNYGVDKYDIGTGF--GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
           ++V+ L  + GV            H   A  +VA  ++ + A GG++ R          +
Sbjct: 51  WLVQNLQEDVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGL 109

Query: 230 IAFIEDPDGYKFEL 243
             ++ DPDG+ +E+
Sbjct: 110 RGYVADPDGHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 55.8 bits (134), Expect = 1e-09
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT--IAVMGYGPEDKNAVLELTYNHGV 313
           + L +GDL+ +  FY + FG   + +     +       +  +  ++    L+      V
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQN----LQEDVGVAV 64

Query: 314 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           T        A       +V    E +  +GG++ R     P    +     DPDG
Sbjct: 65  TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYV-ADPDG 118

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 67.6 bits (165), Expect = 8e-13
 Identities = 44/271 (16%), Positives = 75/271 (27%), Gaps = 63/271 (23%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R  H   RV +L++ I         FY   LG+     RD     Y   F  +   D  
Sbjct: 7   LRPGHAQVRVLNLEEGI--------HFYRNVLGLVET-GRDDQGRVY---FKCWDERDHS 54

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNT 228
             +       + + D   G   FG  V     + K    ++A G   TR P G +     
Sbjct: 55  CYI-------IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGE 106

Query: 229 VIAFIEDPDGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRA 266
            + F E P G+  EL                       E G  P  L   +L   ++   
Sbjct: 107 RVRF-ELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEV 165

Query: 267 INFYKKAFGMEL-LRKRDNPDYKYTIAVMGYGPEDKNAVLELT-----YNHGVTEYDKGN 320
              + +  G  L  R             +    +  +            +H     +   
Sbjct: 166 QKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPEKGKLHHCSFLLE--- 222

Query: 321 GYAQIAIGTDDVYKTAEAIKLSGGKITREPG 351
                    + V +  + + ++   +   P 
Sbjct: 223 -------SWEQVLRAGDIMSMNEVNVDIGPT 246

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 63.4 bits (154), Expect = 2e-12
 Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 20/137 (14%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPE 169
             + +V     D+             FY +  G + +     P  R      + +G+   
Sbjct: 7   ADLSYVNIFTRDIVAMS--------AFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAH 58

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGG 226
           +++ +++L         +           V   E V K V +  A G  + + P      
Sbjct: 59  EAYELMQLA-----QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YY 112

Query: 227 NTVIAFIEDPDGYKFEL 243
           +   A + DP+   F +
Sbjct: 113 HWYQAVLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 6/116 (5%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V +   D+     FY++ FG + +    +P ++           + +   EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 316 YDKGNGYAQIAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                    +    D    V K       +G  + + P      +      LDP+ 
Sbjct: 72  T--SGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 20/133 (15%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
            +  +      L   +         FY   +G +    +         A           
Sbjct: 6   LITSITINTSHLQGML--------GFY-RIIGFQFTASKVDKGSEVHRAVHN------GV 50

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV-DLVKAKGGKVTREPGPVKGGNTVIAF 232
              L Y+    +          G  + D+ KTV +LVK  G     +P  +  G    A 
Sbjct: 51  EFSL-YSIQNPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AI 106

Query: 233 IEDPDGYKFELLE 245
           + DPDG+  EL E
Sbjct: 107 VLDPDGHSIELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 12/115 (10%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            + +    L   + FY +  G +    + +   +   AV             L       
Sbjct: 9   SITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ--N 59

Query: 315 EYDKGNGYAQIAIGTDDVYKT-AEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                    Q+     D+ KT  E +K+ G     +P  +P     I   LDPDG
Sbjct: 60  PQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 22/131 (16%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             + H+   V DL  +I         FY + LG +L  + D        A+L  G     
Sbjct: 3   TGLNHLTLAVADLPASI--------AFYRDLLGFRLEARWD------QGAYLELGSLWLC 48

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
              E  Y      Y        FGIA  D A+    ++A G  V         G++   +
Sbjct: 49  LSREPQYGGPAADYT----HYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--Y 100

Query: 233 IEDPDGYKFEL 243
             DPDG++ E 
Sbjct: 101 FLDPDGHRLEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 287
           + L V DL  +I FY+   G  L  + D   Y
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAY 39

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 66.5 bits (162), Expect = 2e-12
 Identities = 44/282 (15%), Positives = 73/282 (25%), Gaps = 58/282 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R  ++   V DL K+          FY + LG+ +  + +         +L    E  H
Sbjct: 16  VRCAYMEIVVTDLAKSR--------EFYVDVLGLHVTEEDE------NTIYLRSLEEFIH 61

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP-VKGGNT 228
             + L       +         F   V    +V       K  G +  R      KG   
Sbjct: 62  HNLVLR------QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD 114

Query: 229 VIAFIEDPDGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKA 273
            +   EDP G+ +E                L        L        D+ R   +  + 
Sbjct: 115 SVRV-EDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-ED 172

Query: 274 FGMELLRKRDNPDYKYTIAVMGYGPEDKNAVL----ELTYNHGVTEYDKGNGYAQIAIGT 329
            G  +     + D     A M       +  L        +H                  
Sbjct: 173 LGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATH----------EK 222

Query: 330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDGW 369
            ++ +  + +         E GP     +       LDPDG 
Sbjct: 223 HNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 29/139 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPE 169
            R+ H      D+ +          R Y E LG ++    +     +     A++     
Sbjct: 151 VRLDHFNQVTPDVPRG---------RAYLEDLGFRV---SEDIKDSDGVTYAAWMHRKQ- 197

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGG 226
             H       N        G    H   A     ++ +  D + A       E GP + G
Sbjct: 198 TVHDTALTGGN--------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHG 249

Query: 227 NTVIAFI--EDPDGYKFEL 243
            +   ++   DPDG++ E+
Sbjct: 250 VSNAFYLYILDPDGHRIEI 268

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 66.6 bits (162), Expect = 3e-12
 Identities = 47/282 (16%), Positives = 76/282 (26%), Gaps = 58/282 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R  +    V DL K+          FY + LG+ +  + +         +L    E  H
Sbjct: 16  LRCAYAELVVTDLAKSR--------NFYVDVLGLHVSYEDE------NQIYLRSFEEFIH 61

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKGGNT 228
             + LT      K             V   EDV K     +  G +  R + G VKG   
Sbjct: 62  HNLVLT------KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGD 114

Query: 229 VIAFIEDPDGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKA 273
            +   EDP G+ +E                L        L        D+ R   + +  
Sbjct: 115 ALRV-EDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED- 172

Query: 274 FGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT----YNHGVTEYDKGNGYAQIAIGT 329
            G  +     + +     A M       +  L        +H                  
Sbjct: 173 LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTH----------EK 222

Query: 330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDGW 369
            ++ +  + +         E GP     +       LDPD  
Sbjct: 223 HNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNH 264

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 62.4 bits (151), Expect = 3e-12
 Identities = 27/137 (19%), Positives = 39/137 (28%), Gaps = 19/137 (13%)

Query: 110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE 169
            +   + H+     DLD+           FY   LG KL R+     DR T  F G    
Sbjct: 5   RNPNDVFHLAIPARDLDEAY--------DFYVTKLGCKLARR---YPDRITLDFFGD--- 50

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP---GPVKGG 226
               V  L+  +  +       FG      +       L K +G     +          
Sbjct: 51  --QLVCHLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIE 108

Query: 227 NTVIAFIEDPDGYKFEL 243
                F+ DP     E 
Sbjct: 109 EHETFFLIDPSNNLLEF 125

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 11/116 (9%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           + +   DLD A +FY    G +L R+  +      I +  +G +    V  L+       
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLARRYPDR-----ITLDFFGDQL---VCHLSDRWDREV 64

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP---GPLPGINTKITACLDPDG 368
                 +              +  K  G     +            +    +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 65.8 bits (160), Expect = 3e-12
 Identities = 24/193 (12%), Positives = 54/193 (27%), Gaps = 50/193 (25%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             +           +T+         F+T+ LGM +  +         + +L    +   
Sbjct: 10  AHLARAELFSPKPQETL--------DFFTKFLGMYVTHREG------QSVYLRGYEDPYP 55

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
           + +++T            G GH  +     E + +    +       T        G T 
Sbjct: 56  WSLKITE-------APEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF 108

Query: 230 IAFIEDPDGYKFELL------------------------ERGPTPEPLCQVMLRVGDLDR 265
               + PDG+  +LL                         +G   + +  + L   D+  
Sbjct: 109 --EYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTA 166

Query: 266 AINFYKKAFGMEL 278
             + +++  G   
Sbjct: 167 VKDSFERHLGFRT 179

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 62.8 bits (152), Expect = 3e-12
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 22/142 (15%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFL--GYGPEDSHFV 174
           HV Y   D D+          ++Y E  G   L + + PE       +       +    
Sbjct: 12  HVAYACPDADEAS--------KYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQ 63

Query: 175 VELTYNYG--------VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG- 225
           V++             + K++   G  H    V+D+      ++ +G ++  +  P  G 
Sbjct: 64  VQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGT 122

Query: 226 GNTVIAFI--EDPDGYKFELLE 245
           G   I F+  +   G   EL +
Sbjct: 123 GGNRINFMHPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 21/135 (15%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM--GYGPEDKNAVLELTYNHG 312
            V     D D A  +Y++ FG   L + +NP+      +M       +    +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 313 --------VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 364
                   + +++   G   +A   DD+   +  ++  G ++  +  P  G         
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLG--------- 121

Query: 365 DPDGWKSVFVDNLDF 379
              G +  F+     
Sbjct: 122 -TGGNRINFMHPKSG 135

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 39/184 (21%), Positives = 61/184 (33%), Gaps = 41/184 (22%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDS 171
             + +V Y V D D            FY +  G++ + +         NA+    G  D 
Sbjct: 7   TEIRYVGYGVKDFDAEK--------AFYADVWGLEPVGEDA------NNAWFKAQG-ADE 51

Query: 172 HFVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPV--KGG 226
           H VV+L       + D         +A     DV      V+A G KV  EP  +   GG
Sbjct: 52  HHVVQLR------RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGG 104

Query: 227 NTVIAFIEDPDGYKFEL------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 274
                F   PDG  FE+                  P  +  ++L   +    + F+    
Sbjct: 105 GYGFRF-FSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVL 163

Query: 275 GMEL 278
           G ++
Sbjct: 164 GFKV 167

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 12/116 (10%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           L Q+ + V ++ +     +     +      N  +    A    G    +  L L+ NH 
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKA--DYANDGF----AQFTIG----SHCLMLSQNHL 55

Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           V   +  +G   I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 56  VPLENFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 109

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 19/134 (14%), Positives = 34/134 (25%), Gaps = 22/134 (16%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRK-RDIPEDRYTNAFLGYGPEDSH 172
            +  +   V ++ +                L  K         +    +  L      +H
Sbjct: 5   NLNQLDIIVSNVPQVC--------ADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNH 54

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            V    +  G+             I VEDV +    +   G KV   P     G      
Sbjct: 55  LVPLENFQSGI----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LL 103

Query: 233 IEDPDGYKFELLER 246
           ++ P G   +    
Sbjct: 104 VQGPAGLVLDFYRM 117

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 63.3 bits (153), Expect = 3e-11
 Identities = 48/282 (17%), Positives = 80/282 (28%), Gaps = 54/282 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
            V + VG+  +           FY   +G + L  R +                  FV+ 
Sbjct: 14  SVTFWVGNAKQAA--------SFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLS 65

Query: 177 LTYN-----YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTV 229
              N      G      G G       VED    V   + +G K+ REP   +   G   
Sbjct: 66  SALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVK 125

Query: 230 IAFIEDPDGYKFELLERG-----------------PTPEPLCQVMLRV----------GD 262
            A ++        L+E+                  P    L +  L +           +
Sbjct: 126 FAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQE 185

Query: 263 LDRAINFYKKAFGMELLRKRDNPDYK------YTIAVMGYGPEDKNAVLELTYNHGVT-- 314
           +  A  +Y K          D+           +I V  Y    K  + E       +  
Sbjct: 186 MVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQI 245

Query: 315 ----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 352
               +Y+ G G   IA+ T+D+      ++  G +    P  
Sbjct: 246 QEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPST 287

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 61.6 bits (149), Expect = 5e-11
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 36/190 (18%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             +  +     +LD+ +         FYT  LG + + ++           +  G   S 
Sbjct: 25  TSIKQLTLYTAELDRML--------AFYTNMLGAQHVHEQA------DAFTIQLG--VSQ 68

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA- 231
                  +     Y I        IA     +    +   G  +T             A 
Sbjct: 69  IQFRAAADGTKPFYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAY 123

Query: 232 --FIEDPDGYKFELLERGPTPEP------------LCQVMLRVGDLDRAINFYKKAFGME 277
             ++EDP G   EL+ R                  + ++ +   D+++A    K+A    
Sbjct: 124 SCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPV 183

Query: 278 LLRKRDNPDY 287
            L + +    
Sbjct: 184 KLDQIEPAGL 193

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 40.0 bits (93), Expect = 7e-04
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 20/119 (16%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
           Q+ L   +LDR + FY    G + + ++ +         +  G     + ++        
Sbjct: 29  QLTLYTAELDRMLAFYTNMLGAQHVHEQADA------FTIQLG----VSQIQF-----RA 73

Query: 315 EYDKGNGYAQIA--IGTDDVYKTAEAIKLSGGKITREPGPL---PGINTKITACLDPDG 368
             D    +  IA  I  +   +    +   G  +T         P  N       DP G
Sbjct: 74  AADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSG 132

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 61.7 bits (149), Expect = 8e-11
 Identities = 34/234 (14%), Positives = 63/234 (26%), Gaps = 38/234 (16%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAF---LGYGPEDSHF 173
           H+   VG   +           FY   LG++L+++    +D  T         G   +  
Sbjct: 11  HITAIVGHPQENT--------DFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTII 62

Query: 174 VVELTYNYGVDKYDIGT-GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
                          G  G   + +    +A     ++      T      + G   + F
Sbjct: 63  TFFPWAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF 119

Query: 233 IEDPDGYKFELLERGPTPEPLCQ---------------VMLRVGDLDRAINFYKKAFGME 277
            +DP G   E++ER                          L     D+  +  +   G+E
Sbjct: 120 -DDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLE 178

Query: 278 LLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD 331
            + K  +              +  N +       G  +   G     IA   +D
Sbjct: 179 RVGKEGDFVR------YRSAGDIGNVIDLKLTPIGRGQMGAG-TVHHIAWRAND 225

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 51/213 (23%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           R + ++ + V D+             F T+ LG+      D               +   
Sbjct: 3   RSLGYMGFAVSDVAAWR--------SFLTQKLGLMEAGTTD------NGDLFRI--DSRA 46

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP---VKGG 226
           + + +                  G  V     +A+  D +K  G  VT         +G 
Sbjct: 47  WRIAVQQ-------GEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGV 99

Query: 227 NTVIAFIEDPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAIN 268
             +I F  DP G   E+                         + L   +  V D D+A+ 
Sbjct: 100 TGLITF-ADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALA 158

Query: 269 FYKKAFGM---ELLRKRDNPDYKYTIAVMGYGP 298
           FY    G    +++  +  PD       +    
Sbjct: 159 FYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE 191

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 22/133 (16%), Positives = 38/133 (28%), Gaps = 14/133 (10%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
              D D+ +         +     G +LL ++        +A L  G      +V  T  
Sbjct: 9   AYTDPDRAV--------DWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGE 57

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
                   G       + V DV +      A G  + +       G      + D +G+ 
Sbjct: 58  PYTVSCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHL 116

Query: 241 FELLE--RGPTPE 251
           +E     R   P 
Sbjct: 117 WEFTRHLRDVPPR 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 56.0 bits (135), Expect = 7e-10
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL--TYNHGV 313
           V L   D DRA+++  + FG  LL ++         A +  G      ++ +  T     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG----GGIVMVRRTGEPYT 60

Query: 314 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                G+   Q+ +   DV +       +G  I +     P    +     D +G
Sbjct: 61  VSCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYL-VRDLEG 114

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 56.6 bits (136), Expect = 5e-10
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 16/133 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           RR+ H+V  V  +  T          FY++ LGM+++  ++          L +G +  +
Sbjct: 26  RRLDHIVMTVKSIKDTT--------MFYSKILGMEVMTFKE------DRKALCFGDQKFN 71

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVI 230
                        + +        I    + + +  +KA    +   P P  G  G  + 
Sbjct: 72  LHEVGKEFEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMS 131

Query: 231 AFIEDPDGYKFEL 243
            +  DPD    E+
Sbjct: 132 IYFRDPDRNLIEV 144

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           +++ V  +     FY K  GME++  +++         + +G +  N             
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDRKA------LCFGDQKFNLHEVGKEFEPKAA 84

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 368
           +          I    + +  + +K     I   P P  G    I +    DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 56.1 bits (135), Expect = 5e-10
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 18/134 (13%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             + H+V  V D+  T          FY + LGMK +              L +G +  +
Sbjct: 9   SHLDHLVLTVADIPTTT--------NFYEKVLGMKAVSFGA------GRIALEFGHQKIN 54

Query: 173 FVVELTYNYGVDKYDIGTGFGHF-GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 231
              +L   +     ++  G      I    ++  +  V+ +G  +   P    G    I 
Sbjct: 55  LH-QLGNEFEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAIT 113

Query: 232 --FIEDPDGYKFEL 243
             +  DPDG   E+
Sbjct: 114 SFYFRDPDGNLIEV 127

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 24/115 (20%), Positives = 36/115 (31%), Gaps = 8/115 (6%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           ++L V D+    NFY+K  GM+ +                   +  N       N  V  
Sbjct: 14  LVLTVADIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGS 73

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 368
            D         I    +    + ++  G  I   P    G    IT+    DPDG
Sbjct: 74  ADL------CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDG 122

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 21/124 (16%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
              +  +           FY + LGM +        D          P ++H  V     
Sbjct: 14  ATPEPARAQ--------AFYGDILGMPVAM------DHGWIVTHA-SPLEAHAQVSFARE 58

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 240
            G      GT      I V++  +    +   G  +   P     G     F+ DP G  
Sbjct: 59  GGS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKL 112

Query: 241 FELL 244
             +L
Sbjct: 113 INIL 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 52.4 bits (126), Expect = 7e-09
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 13/112 (11%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
            +   +  RA  FY    GM +    D+        V    P + +A +         E 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVA--MDHGWI-----VTHASPLEAHAQVSF-----AREG 59

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             G     ++I  D+  +    I  +G  I   P        +     DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 110

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 18/142 (12%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGP----E 169
           R+      V D+ K++         FY + LG+++    +     +T A L  G     +
Sbjct: 4   RISLFAVVVEDMAKSL--------EFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWD 52

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
               V      +                    V K    +   G +   +P     G   
Sbjct: 53  TVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY 112

Query: 230 IAFIEDPDGYKFELLERGPTPE 251
            A ++DPDG   +L    P P 
Sbjct: 113 -AIVKDPDGNVVDLFA--PLPL 131

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL-TYNHGV 313
              + V D+ +++ FY +  G+E+    +     +T AV+  G       +E        
Sbjct: 7   LFAVVVEDMAKSLEFY-RKLGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 63

Query: 314 TEYDKGNGYAQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
            +   G     IA        V K    +  +G +   +P        +     DPDG
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 54.2 bits (130), Expect = 2e-08
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 45/188 (23%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           R + ++     D+             +  + LGM   +     E      +L      + 
Sbjct: 4   RSLGYLRIEATDMAAWR--------EYGLKVLGMVEGKGAP--EGA---LYLRMDDFPAR 50

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG---PVKGG 226
            VV                    G      E + +  + +  +G             +  
Sbjct: 51  LVVV---------PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRV 101

Query: 227 NTVIAFIEDPDGYKFEL-------LERGPTPEP---------LCQVMLRVGDLDRAINFY 270
           + +I F  DP G   E+         R  +P           +  V+L   D   A++FY
Sbjct: 102 DEMIRF-ADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFY 160

Query: 271 KKAFGMEL 278
           +   G  L
Sbjct: 161 RDVLGFRL 168

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 53.5 bits (128), Expect = 3e-08
 Identities = 30/264 (11%), Positives = 71/264 (26%), Gaps = 51/264 (19%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             + ++   V +LD            +    +GM++     + +      +L       H
Sbjct: 5   TELGYLGLSVSNLDAWR--------DYAAGIMGMQV-----VDDGEDDRIYLRMD--RWH 49

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGG 226
             + L         D      + G  V    ++ +  + +K  G             +  
Sbjct: 50  HRIVLH-------ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRV 102

Query: 227 NTVIAFIEDPDGYKFELL-------------------ERGPTPEPLCQVMLRVGDLDRAI 267
             ++    DP G   E+                    +     + L  +++R  D++ A 
Sbjct: 103 LGLVKL-HDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEAT 161

Query: 268 NFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI 327
            FY+       +  +           +     D++  L              N       
Sbjct: 162 RFYRLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPMDKRI---NHLMIEYT 218

Query: 328 GTDDVYKTAEAIKLSGGKITREPG 351
             DD+    + ++     +T + G
Sbjct: 219 HLDDLGYAHDLVRQQKIDVTLQIG 242

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 26/194 (13%), Positives = 60/194 (30%), Gaps = 25/194 (12%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRML 116
           F++ +    +       +KL    G+  E      +  +S     + +     ++ + + 
Sbjct: 89  FEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG 148

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFV 174
           H++ R  D+++          RFY        +  +    +       F+       H +
Sbjct: 149 HIIIREDDVEEAT--------RFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSL 199

Query: 175 VELTYNYGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG--PVKGGNTV 229
                        +     H  I      D+    DLV+ +   VT + G         +
Sbjct: 200 A-------FGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSN--DEAL 250

Query: 230 IAFIEDPDGYKFEL 243
             +  +P G+ +E 
Sbjct: 251 TFYCANPSGWLWEP 264

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 5e-08
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 109/318 (34%)

Query: 17  TYNKTSLPSQSSLK-LSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALK 75
             +K +   +SSL  L P              +    RL++F   A IP         L 
Sbjct: 351 NCDKLTTIIESSLNVLEP--------AEYRKMF---DRLSVFPPSAHIP------TILLS 393

Query: 76  LLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCG 135
           L+  +    +                  V++  K  K  ++          ++  S+   
Sbjct: 394 LIWFDVIKSD---------------VMVVVN--KLHKYSLV-----EKQPKESTISIPSI 431

Query: 136 YCRFYTECLGMKLLRKR-----------------DIPEDRYTNAFLGYGPEDSHFVVELT 178
           Y     +      L +                      D+Y  + +G+     H      
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-----HL----- 481

Query: 179 YNYGVDKYDIGTGFGH-FGIAVEDVAKTVDL--VKAKGGKVTREPGPVKGGNTVIAFIED 235
               ++  +  T F   F          +D   ++    K+  +        +++  ++ 
Sbjct: 482 --KNIEHPERMTLFRMVF----------LDFRFLEQ---KIRHDSTAWNASGSILNTLQQ 526

Query: 236 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT----I 291
              YK  + +  P  E L      V  +   ++F  K     L+        KYT    I
Sbjct: 527 LKFYKPYICDNDPKYERL------VNAI---LDFLPKI-EENLIC------SKYTDLLRI 570

Query: 292 AVMGYGPEDKNAVLELTY 309
           A+M     +  A+ E  +
Sbjct: 571 ALM----AEDEAIFEEAH 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 52/198 (26%)

Query: 199 VEDVAKTVDLVKAKGGKVTREPGPV------------KGGNTVIAFIED---PDGYKFEL 243
           V+D+ K++ L K +   +      V            K    V  F+E+    + YKF L
Sbjct: 38  VQDMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-YKF-L 94

Query: 244 LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR-KRDNPDY-KYTIAVMGYGPED- 300
           +             ++      ++    + +  +  R   DN  + KY +       +  
Sbjct: 95  MSP-----------IKTEQRQPSMM--TRMYIEQRDRLYNDNQVFAKYNV----SRLQPY 137

Query: 301 ---KNAVLELTYNHGVTEY-DKGNGYAQIAIGTDDVYKTAEAIKLSGGKI-------TRE 349
              + A+LEL     V      G+G   +A+   DV  + +       KI          
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVAL---DVCLSYKVQCKMDFKIFWLNLKNCNS 194

Query: 350 PGPLPGINTKITACLDPD 367
           P  +  +  K+   +DP+
Sbjct: 195 PETVLEMLQKLLYQIDPN 212

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 52.3 bits (125), Expect = 7e-08
 Identities = 25/212 (11%), Positives = 60/212 (28%), Gaps = 49/212 (23%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R+ ++ + V D+             F T+ +G+               A      +   
Sbjct: 3   ERLGYLGFAVKDVPAWD--------HFLTKSVGLMAAGSAG------DAALYRA--DQRA 46

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
           + + +                + G+ V     + +  D ++  G   TR    +     V
Sbjct: 47  WRIAVQP-------GELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKV 99

Query: 230 IAFI--EDPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINF 269
           +  +  +DP G   E+                         + +   +  V D  +A+ F
Sbjct: 100 MGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAF 159

Query: 270 YKKAFGM---ELLRKRDNPDYKYTIAVMGYGP 298
           Y +  G    +++  +  P+       +    
Sbjct: 160 YTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG 191

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 50.6 bits (121), Expect = 7e-08
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 31/152 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           R  + +   V D+++++        + Y E  G++  +     +    +      P  + 
Sbjct: 18  RNTVQIGIVVRDIEESL--------QNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKAR 69

Query: 173 FVVELTYNYGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGK 215
             +   +  G  + ++                 G G  H    V+D+ + V+ +  KG K
Sbjct: 70  AKLAF-FELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMK 128

Query: 216 VTREPGPVKGGNTVIAFI--EDPDGYKFELLE 245
           V ++ G  +GG    A+I          ELLE
Sbjct: 129 VIQK-GDFEGGR--YAYIDTLRALKVMIELLE 157

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 17/120 (14%)

Query: 252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK---------- 301
              Q+ + V D++ ++  Y + FG+E  +     DY          P             
Sbjct: 19  NTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG 78

Query: 302 NAVLELTYNHG----VTEY--DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 355
              LEL           E+    G G   IA    D+ +  E +   G K+ ++ G   G
Sbjct: 79  PLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDFEG 137

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 52.3 bits (125), Expect = 8e-08
 Identities = 34/270 (12%), Positives = 74/270 (27%), Gaps = 63/270 (23%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
             + ++   V D D            F T+ LG+++L + +  +DR    +L    +  H
Sbjct: 8   IELGYMGISVKDPDAWK--------SFATDMLGLQVLDEGE--KDR---FYLRM--DYWH 52

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGG 226
             + +        ++      + G  V    +       +   G K+          +  
Sbjct: 53  HRIVVH-------HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMV 105

Query: 227 NTVIAFIEDPDGYKFEL-------------------LERGPTPEPLCQVMLRVGDLDRAI 267
             ++   EDP G   E+                    +     + L   ++R  D+  A 
Sbjct: 106 LGLMKT-EDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAH 164

Query: 268 NFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH------GVTEYDKGNG 321
            FY         R             +  G   + + +             +    + N 
Sbjct: 165 KFYSLLG----FRGDV-----EYRIPLPNGMTAELSFMHCNARDHSIAFGAMPAAKRLNH 215

Query: 322 YAQIAIGTDDVYKTAEAIKLSGGKITREPG 351
                   +D+  T +    +   I  + G
Sbjct: 216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLG 245

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 52.3 bits (124), Expect = 1e-07
 Identities = 49/328 (14%), Positives = 94/328 (28%), Gaps = 70/328 (21%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H+ +  GD             R ++  LGM+   K D+      +A       D  F+  
Sbjct: 28  HIEFWCGDATNVA--------RRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFT 79

Query: 177 LTYNYGVDKYDI-----------------------GTGFGHFGIAVEDVAKTVDLVKAKG 213
             Y+  +   +I                       G G     I VED      +  A G
Sbjct: 80  APYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANG 139

Query: 214 GKVTREP---------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP-- 250
              +  P           VK  G+ V+ ++             P   + E     P    
Sbjct: 140 AIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYG 199

Query: 251 -EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMG----YGPEDKNAVL 305
              L   +  V +L  A+ +     G     +    D     + +        ++   + 
Sbjct: 200 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLP 259

Query: 306 ELTYNHGVT---------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI 356
                HG           E+++G G   +A+ ++D+++T   ++        +   +P  
Sbjct: 260 INEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFD--FMPSP 317

Query: 357 NTKITACLDPDGWKSVFVDNLDFLKELE 384
                  L       +  D +   +EL 
Sbjct: 318 PPTYYQNLKKRVGDVLSDDQIKECEELG 345

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 11/123 (8%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
           +    D+D+ + ++++  G        + +       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVD 375
            +        +  + +    + +K +G     +    P G   +  +    DG    F +
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG--ARECSITTTDGCILRFFE 143

Query: 376 NLD 378
           ++ 
Sbjct: 144 SIQ 146

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 41.6 bits (97), Expect = 7e-05
 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 18/135 (13%)

Query: 119 VYRVGDLDKTINSLGCGYCRFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVV 175
           VY   D+DKT+        +++ E LG       R  +   D             +H   
Sbjct: 26  VYFTKDMDKTV--------KWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTP 77

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 235
              ++    +           + +E +      VK  G     +      G    + I  
Sbjct: 78  FRGFHLFKGE---PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITT 133

Query: 236 PDGYK---FELLERG 247
            DG     FE ++ G
Sbjct: 134 TDGCILRFFESIQEG 148

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 50.2 bits (119), Expect = 5e-07
 Identities = 49/283 (17%), Positives = 83/283 (29%), Gaps = 56/283 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
            VV+ VG+  +           +Y+   GM+L+            A        + FV+ 
Sbjct: 25  AVVFAVGNAKQAA--------HYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLT 76

Query: 177 LTYNYGVDKYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP--GPVKGG 226
                               G G     I V D           G +   EP     + G
Sbjct: 77  SVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHG 136

Query: 227 NTVIAFIEDPDGYKFELLERG--------------PTPEPLCQVMLRV----------GD 262
             V+A I      +  L++R               P  EP      +           G 
Sbjct: 137 TVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGR 196

Query: 263 LDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTEYDK-- 318
           ++  + FY K  G   +++    D   +Y+ A+M     D    ++   N       K  
Sbjct: 197 MNEWVGFYNKVMGFTNMKEFVGDDIATEYS-ALMSKVVADGTLKVKFPINEPALAKKKSQ 255

Query: 319 ---------GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 352
                    G G   IA+ T D+ +T   ++ +G +    P  
Sbjct: 256 IDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS 298

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 47.7 bits (113), Expect = 5e-07
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 18/128 (14%)

Query: 246 RGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVL 305
           +G    P    +L V +   +  FYK   G++      +P +    ++           L
Sbjct: 20  QGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF----SLFVLAN---GMKL 69

Query: 306 ELTYNHGVT-EYDKGNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLP-GINTKI 360
            L   H V  +     G  ++A        V +T    K SG  + ++P  +  G     
Sbjct: 70  GLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTA 129

Query: 361 TACLDPDG 368
               DPD 
Sbjct: 130 A---DPDS 134

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 23/131 (17%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
             +  V +   +         +FY   LG+  +         ++   L  G       + 
Sbjct: 28  FTILYVDNPPAST--------QFYKALLGVDPVES----SPTFSLFVLANG-----MKLG 70

Query: 177 LTYNYGVD-KYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
           L   + V+ K  +  G G     VE+   V +T    KA G  + ++P  ++ G T    
Sbjct: 71  LWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--T 128

Query: 233 IEDPDGYKFEL 243
             DPD ++  +
Sbjct: 129 AADPDSHRLRV 139

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 23/141 (16%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
            V++ V +  K+          FY   L  + +         +    +  G       + 
Sbjct: 9   LVLFYVKNPAKSE--------EFYKNLLDTQPIES----SPTFAMFVMKTG-----LRLG 51

Query: 177 LTYNYGVD-KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
           L     ++ K     G       V   E V +       K   + + P  +  G T    
Sbjct: 52  LWAQEEIEPKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FV 109

Query: 233 IEDPDGYKFELLERGPTPEPL 253
             DPD ++  +     T E L
Sbjct: 110 GVDPDEHRLRIFCLKRTAENL 130

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 15/118 (12%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
            V+  V +  ++  FYK     +      +P +    A+           L L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQ--PIESSPTF----AMFVMKT---GLRLGLWAQEEIE 59

Query: 315 EY-DKGNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
               +  G  +++      + V +           I + P  +          +DPD 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDE 115

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 20/121 (16%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
             ++ V +++R+ +FY+  F  E       P Y                 L   ++ G  
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE--PVFVTPRY----VAFPSS----GDALFAIWSGGEE 65

Query: 315 EYDKGNGYAQIAIGT------DDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPD 367
              +   +++I I        D ++      K     + +EP     G    I+   DPD
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLIS---DPD 122

Query: 368 G 368
           G
Sbjct: 123 G 123

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 26/133 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
             +  V +++++          FY      + +        RY               + 
Sbjct: 16  LQLVYVSNVERST--------DFYRFIFKKEPVFVTP----RYVAFPSSGD------ALF 57

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVA------KTVDLVKAKGGKVTREPGPVKGGNTVI 230
             ++ G +       F   GI +                K+    V +EP     G T  
Sbjct: 58  AIWSGGEEPVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF- 116

Query: 231 AFIEDPDGYKFEL 243
             I DPDG+   +
Sbjct: 117 -LISDPDGHIIRV 128

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 18/116 (15%), Positives = 28/116 (24%), Gaps = 15/116 (12%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
            L + D+  A+  +    G EL  +  N    Y    +          L L         
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSN----YAYLELS------GCGLRLLEEPARKII 61

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIK----LSGGKITREPGPLPGINTKITACLDPDG 368
             G     I I   D+      +                 +P    +      PDG
Sbjct: 62  PDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMP-YGQREFQVRMPDG 116

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 23/129 (17%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
            + D+ + +          + + LG +L  +          A+L         + E    
Sbjct: 14  HIPDMQEAL--------TLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARK 59

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREPGPVKGGNTVIAFIEDP 236
              D    G       I V D+      +                 +  G      +  P
Sbjct: 60  IIPD----GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMP 114

Query: 237 DGYKFELLE 245
           DG       
Sbjct: 115 DGDWLNFTA 123

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 9/120 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT-------IAVMGYGPEDKNAVLELT 308
           +++    +  A+ FYK AFG         P  K          + +         V +++
Sbjct: 30  LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVS 88

Query: 309 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
              G +            +GT D          +G            +        DP G
Sbjct: 89  SLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELG-FKGKVTDPFG 147

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 38.9 bits (90), Expect = 9e-04
 Identities = 19/144 (13%), Positives = 32/144 (22%), Gaps = 19/144 (13%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLL-------RKRDIPEDRYTNAFLGYGPE 169
            ++     +   +         FY    G           RK D       ++ L     
Sbjct: 29  MLLVEAQKVGDAV--------TFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS 80

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
                   +          G+G   F +  +D    V      G                
Sbjct: 81  SFVVCDVSSLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK 139

Query: 230 IAFIEDPDGYKFELLERG--PTPE 251
              + DP G  +   E+    T E
Sbjct: 140 -GKVTDPFGVTWIFAEKKTVITDE 162

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 20/117 (17%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 317
           L   D D    FY++  G  ++    +  +     ++  G    + +LE   + G    D
Sbjct: 9   LPSRDFDSTAAFYER-LGFGIV--FRDAGW----MILQRG----DLMLEFFAHPG---LD 54

Query: 318 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI------NTKITACLDPDG 368
               +    +  DD+ +     K  G + T    P             + A +DPDG
Sbjct: 55  PLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 23/136 (16%), Positives = 39/136 (28%), Gaps = 28/136 (20%)

Query: 119 VYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 178
                D D T          FY   LG  ++ +            L  G     F     
Sbjct: 8   NLPSRDFDSTA--------AFYER-LGFGIVFRDA------GWMILQRGDLMLEF----- 47

Query: 179 YNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG------NTVIAF 232
             +     D    +    + ++D+A+     K+ G + T    P             +A 
Sbjct: 48  --FAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAA 105

Query: 233 IEDPDGYKFELLERGP 248
           + DPDG    L++   
Sbjct: 106 LVDPDGTLLRLIQNEL 121

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3 Length = 357

 Score = 40.1 bits (93), Expect = 8e-04
 Identities = 40/262 (15%), Positives = 67/262 (25%), Gaps = 52/262 (19%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVV 175
            + +                     E +G   +   R      Y          + + ++
Sbjct: 15  FIEFASPTPGTL---------EPIFEIMGFTKVATHRSKNVHLYRQG-------EINLIL 58

Query: 176 ELTYNYGVDKYDIGTGFG--HFGIAVEDVAKTVDLVKAKGGKVTRE---------PGPVK 224
               N     +    G         V+D  K  +     G +             P    
Sbjct: 59  NNEPNSIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKG 118

Query: 225 GGNTVIAFIEDPDGYK----FELLERGPTPEPLCQVMLRV----------GDLDRAINFY 270
            G   +  I+           + +             L+V          G +    NFY
Sbjct: 119 IGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGLKVIDHLTHNVYRGRMVYWANFY 178

Query: 271 KKAFGMELLRKRDNPDYKYTI---AVMGYGPEDKNAVLELTYNHG---VTEY---DKGNG 321
           +K F     R  D    +YT      M          L    + G   + E+     G G
Sbjct: 179 EKLFNFREARYFDIKG-EYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG 237

Query: 322 YAQIAIGTDDVYKTAEAIKLSG 343
              +A  TDD+ KT +A+K  G
Sbjct: 238 IQHVAFLTDDLVKTWDALKKIG 259

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.98
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.98
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.97
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.97
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.97
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.97
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.97
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.97
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.97
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.97
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.97
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.96
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.94
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.92
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.9
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.9
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.89
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.84
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.81
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.8
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.79
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.78
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.78
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.77
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.76
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.75
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.75
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.75
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.75
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.75
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.73
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.73
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.73
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.73
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.73
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.73
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.73
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.72
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.72
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.72
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.72
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.72
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.71
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.71
3ghj_A	141	Putative integron gene cassette protein; integron	99.71
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.71
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.7
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.69
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.69
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.69
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.69
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.68
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.68
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.68
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.67
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.67
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.67
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.67
2i7r_A	118	Conserved domain protein; structural genomics cons	99.67
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.67
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.67
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.66
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.66
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.66
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.66
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.66
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.66
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.65
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.65
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.65
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.65
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.65
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.65
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.65
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.65
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.64
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.64
2i7r_A	118	Conserved domain protein; structural genomics cons	99.64
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.64
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.64
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.64
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.63
3ghj_A	141	Putative integron gene cassette protein; integron	99.63
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.63
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.63
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.63
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.63
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.63
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.63
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.62
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.62
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.62
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.62
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.62
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.61
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.61
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.61
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.61
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.6
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.6
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.6
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.6
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.6
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.59
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.59
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.58
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.58
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.58
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.57
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.57
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.57
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.57
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.57
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.57
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.57
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.56
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.56
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.56
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.56
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.55
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.55
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.55
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.53
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.52
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.51
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.5
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.41
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.4
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.36
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.35
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.34
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.31
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.28
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.27
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.27
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.27
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.2
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.14
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.02
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.02
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.01
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.98
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.98
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.96
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.93
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.89
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.88
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.29
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.04
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.77
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.87
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.74
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	92.65

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=6.9e-35  Score=281.95  Aligned_cols=249  Identities=32%  Similarity=0.595  Sum_probs=197.8

Q ss_pred             cccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC-----------CCceEEEEEeeCCCCccEE
Q 016689          106 DWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFV  174 (384)
Q Consensus       106 ~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~  174 (384)
                      .|.+|+.+++.||+|.|+|+++++        +||+++|||++..+...+           ++++..++++++++.....
T Consensus        19 ~~~~M~~~~i~Hv~l~V~Dle~s~--------~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~   90 (330)
T 3zi1_A           19 YFQSMAARRALHFVFKVGNRFQTA--------RFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFV   90 (330)
T ss_dssp             CGGGCSCCEEEEEEEECSCHHHHH--------HHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCE
T ss_pred             eeeecccceeeEEEEEeCCHHHHH--------HHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccE
Confidence            355666789999999999999999        999999999998776655           4567788998877666778


Q ss_pred             EEEEecCCCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC-CCCCc
Q 016689          175 VELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPL  253 (384)
Q Consensus       175 lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~-~~~~~  253 (384)
                      ++|+.+.+...+..+.|+.|++|.|+|+   +++++++|+++...|.    +   .+|++|||||.|||++... .+.++
T Consensus        91 leL~~~~~~~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~----~---~~~~~DPdG~~iel~~~~~~~~~~i  160 (330)
T 3zi1_A           91 AELTYNYGVGDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE----G---VFETEAPGGYKFYLQNRSLPQSDPV  160 (330)
T ss_dssp             EEEEEETTCCCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET----T---EEEEECTTSCEEEEESSCCTTSCSE
T ss_pred             EEEeccCCCCccccCCCeeEEEEECchH---HHHHHHcCCceeccCC----c---eEEEECCCCCEEEEEecCCCCCCce
Confidence            9998876666666778999999999987   6788999999886542    1   6789999999999999864 56789


Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC--C
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--D  331 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd--D  331 (384)
                      .||.|.|.|++++++||+++|||++..+....+    ..++..++.  ...+++....+  ....+.+..|++|.|+  |
T Consensus       161 ~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~d  232 (330)
T 3zi1_A          161 LKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKE  232 (330)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGG
T ss_pred             eEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEccc
Confidence            999999999999999999999999986654322    234554432  55677655432  2233457789999994  7


Q ss_pred             HHHHHHHHHHCCCeEecCCccC--CC-CCceEEEEECCCCCeEEEEecCccc
Q 016689          332 VYKTAEAIKLSGGKITREPGPL--PG-INTKITACLDPDGWKSVFVDNLDFL  380 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~--~~-~~~~~~~~~DPdG~~iElve~~~f~  380 (384)
                      +++++++++++|+++..+|...  ++ ...+.+||+|||||.|||++..+|.
T Consensus       233 ld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          233 LPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             HHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence            9999999999999988776542  22 1248899999999999999987765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=3.7e-31  Score=256.61  Aligned_cols=240  Identities=13%  Similarity=0.138  Sum_probs=181.2

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      ..++++||.|.|+|+++++        +||+++|||++..+.+      ..+++.......++.+.+...       ...
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~   66 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETL--------DFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEA-------PEA   66 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHH--------HHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEEC-------SSC
T ss_pred             CCcEEEEEEEEeCCHHHHH--------HHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeC-------CCC
Confidence            3568999999999999999        9999999999976532      134444322222334555432       135


Q ss_pred             CceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC-------------------
Q 016689          191 GFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------------------  248 (384)
Q Consensus       191 g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~-------------------  248 (384)
                      ++.|++|.|+|   +++++++|+++|+++...+.  ..+..+.++|+|||||.|||+....                   
T Consensus        67 g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~--~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~  144 (339)
T 3lm4_A           67 GMGHAAMRTSSPEALERRAKSLTDGNVDGTWSED--QFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKK  144 (339)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECC--STTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCC
T ss_pred             CcceEEEEeCCHHHHHHHHHHHHHCCCceeeccC--CCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCccccc
Confidence            78999999998   88999999999999987664  2345667899999999999986421                   


Q ss_pred             -----CCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCcee
Q 016689          249 -----TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYA  323 (384)
Q Consensus       249 -----~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~  323 (384)
                           .+.+++||.|.|.|++++++||+++|||++..... +++.....++..+..  ++.+.+....    ....++++
T Consensus       145 ~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~----~~~~~~~~  217 (339)
T 3lm4_A          145 PLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDM----TGGHGKLH  217 (339)
T ss_dssp             CSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECT----TSCCSEEE
T ss_pred             CCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccC----CCCCCcee
Confidence                 12359999999999999999999999999987654 333344556665432  4455555421    12345789


Q ss_pred             EEEEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccc
Q 016689          324 QIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  380 (384)
Q Consensus       324 hiaf~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~  380 (384)
                      |++|.|+|   +++++++|+++|+++..+|+++..+..+++||+|||||.||+++..+..
T Consensus       218 Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  277 (339)
T 3lm4_A          218 HLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYL  277 (339)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCee
Confidence            99999999   8889999999999999888766555457899999999999999765543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=9.3e-31  Score=250.01  Aligned_cols=238  Identities=17%  Similarity=0.155  Sum_probs=175.6

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+++||.|.|+|+++++        +||+++|||++..+..  ++   .+++.......++.+.+...       ...+
T Consensus         6 i~~i~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~~~~l~l~~~-------~~~~   65 (309)
T 3hpy_A            6 VLRPGHAQVRVLNLEEGI--------HFYRNVLGLVETGRDD--QG---RVYFKCWDERDHSCYIIREA-------DTAG   65 (309)
T ss_dssp             EEEEEEEEEEESSHHHHH--------HHHHHTSCCEEEEECT--TS---CEEEECTTCCBSCSEEEEEC-------SSCE
T ss_pred             cceeeEEEEEcCCHHHHH--------HHHHhccCCEEEEEcC--CC---eEEEEeccCCCceEEEEEeC-------CCCc
Confidence            468999999999999999        9999999999876532  11   24454311122234444432       1247


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC-------------------
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------------------  249 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~-------------------  249 (384)
                      +.|++|.|+|   +++++++|+++|+++...+.....+..+.+||+|||||.|||++....                   
T Consensus        66 ~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~  145 (309)
T 3hpy_A           66 IDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREH  145 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGS
T ss_pred             eeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCC
Confidence            8999999997   899999999999998876543223456788999999999999975421                   


Q ss_pred             ---CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-CcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          250 ---PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       250 ---~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                         +..++||.|.|+|++++++||+++|||++......+. +.....++..+..  .+.+.+...      +...+.+|+
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hi  217 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHC  217 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEE
Confidence               2358999999999999999999999999876654332 3344555554332  333444331      123468999


Q ss_pred             EEEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|+|+++   ++++|+++|+++..+|..+..+..+++||+|||||.|||....
T Consensus       218 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          218 SFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            999987664   6789999999998888766554468899999999999999873

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=3.7e-30  Score=249.28  Aligned_cols=248  Identities=13%  Similarity=0.090  Sum_probs=175.7

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-CceEEEEEeeCCCCccEEEEEEecCCCCCC-c
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKY-D  187 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~  187 (384)
                      ++..+|+||.+.|+|+++++        +||+++|||+++.+....+ .....++++......+..+++......... .
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~--------~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~   75 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENT--------DFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVI   75 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHH--------HHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBC
T ss_pred             ccCCcccEEEEEeCCHHHHH--------HHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCC
Confidence            35678999999999999999        9999999999987653222 222234444322222346666543332222 2


Q ss_pred             CCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC---C------------
Q 016689          188 IGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---P------------  250 (384)
Q Consensus       188 ~g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~---~------------  250 (384)
                      ...++.|++|.|+  |+++++++|+++|+++..  ..  .++...+||+|||||.|||++..+.   +            
T Consensus        76 ~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~--~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i  151 (335)
T 3oaj_A           76 GDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IE--RFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAI  151 (335)
T ss_dssp             CBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EE--ETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHhCcceeee--ec--cCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhh
Confidence            2347899999999  999999999999999875  22  2456789999999999999997642   1            


Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCC-CceeEEEEEc
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG-NGYAQIAIGT  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g-~g~~hiaf~V  329 (384)
                      .+++||.|.|+|++++.+||+++|||++..+..    ....  +..+..  +..+.+....+......+ .+++|+||.|
T Consensus       152 ~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~--~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v  223 (335)
T 3oaj_A          152 KGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFVR--YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRA  223 (335)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TEEE--EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEE
T ss_pred             ccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CEEE--EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEc
Confidence            259999999999999999999999999986532    1222  222221  334455443322222223 4689999999


Q ss_pred             CC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec-Cccc
Q 016689          330 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN-LDFL  380 (384)
Q Consensus       330 dD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~-~~f~  380 (384)
                      +|   ++++.++|+++|+++.. +....+  .+.+||+|||||.|||... ++|.
T Consensus       224 ~d~~~l~~~~~~L~~~G~~~~~-~~~r~~--~~siYfrDP~G~~iEl~td~pgf~  275 (335)
T 3oaj_A          224 NDDEDQLDWQRYIASHGYGVTP-VRDRNY--FNAIYFREHGEILFEIATDPPGFA  275 (335)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCC-CEECSS--SEEEEEECTTSCEEEEEESCSCTT
T ss_pred             CCHHHHHHHHHHHHHCCCCccc-cccCCc--EEEEEEECCCCcEEEEEeCCCCCC
Confidence            88   66789999999998643 223333  4789999999999999997 4554

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.98  E-value=1.2e-30  Score=251.14  Aligned_cols=237  Identities=21%  Similarity=0.214  Sum_probs=178.0

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcC
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI  188 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~  188 (384)
                      .++.+++.|+.|.|+|+++++        +||+++|||++..+.   +   ..+++....+..++.+.+...       .
T Consensus        12 ~~~i~~l~hv~l~v~Dl~~a~--------~FY~~vlG~~~~~~~---~---~~~~l~~~~~~~~~~l~l~~~-------~   70 (323)
T 1f1u_A           12 APDIVRCAYMEIVVTDLAKSR--------EFYVDVLGLHVTEED---E---NTIYLRSLEEFIHHNLVLRQG-------P   70 (323)
T ss_dssp             CCCEEEEEEEEEEESCHHHHH--------HHHTTTTCCEEEEEC---S---SEEEEECTTCCSSCSEEEEEC-------S
T ss_pred             CcccceeeEEEEEeCCHHHHH--------HHHHhCCCCEEeeec---C---CEEEEEecCCCCcEEEEEEEC-------C
Confidence            345679999999999999999        999999999987543   1   134555322222345555442       1


Q ss_pred             CCCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC---------------C
Q 016689          189 GTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------P  250 (384)
Q Consensus       189 g~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~---------------~  250 (384)
                      ..++.|++|.|   +|+++++++|+++|+++...+.....+.++.++|+||+||.|||++....               +
T Consensus        71 ~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~  150 (323)
T 1f1u_A           71 IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGEL  150 (323)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCC
T ss_pred             CCCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCC
Confidence            24788999999   78999999999999998876652222344677899999999999976432               2


Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++||.|.|+|++++++|| ++|||++......+++.....++..+..  ++.+.+...       .+++++|++|.|+
T Consensus       151 ~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~  220 (323)
T 1f1u_A          151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATH  220 (323)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECS
T ss_pred             ceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECC
Confidence            35899999999999999999 9999999866554444444555554322  344444431       1238899999999


Q ss_pred             CHHH---HHHHHHHCCC--eEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 DVYK---TAEAIKLSGG--KITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 Dvd~---~~~~l~~~G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |+++   ++++|+++|+  ++..+|+.+..+.+.++||+|||||.||++..
T Consensus       221 d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          221 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            9988   9999999999  99877776654445789999999999999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.98  E-value=3.2e-30  Score=243.84  Aligned_cols=239  Identities=21%  Similarity=0.206  Sum_probs=171.3

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      ..+.|+.|.|+|+++++        +||+++|||++..... +.+  .|..+  ..+  . .....+.......+ ....
T Consensus        31 g~~~~v~l~v~D~~~a~--------~FY~~vlG~~~~~~~~-~~~~~~~~~~--~~~--g-~~~~~l~~~~~~~~-~~~~   95 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAK--------KFYTSLFGWGYDDNPV-PGGGGVYSMA--TLN--G-EAVAAIAPMPPGAP-EGMP   95 (282)
T ss_dssp             TSEEEEEEEESCHHHHH--------HHHHHHHCCEEEEEC------CCEEEE--EET--T-EEEEEEEECCSCC----CC
T ss_pred             CCcEEEEEecCCHHHHH--------HHHHHhcCcEEeecCC-CCCccCEEEE--EeC--C-eeeEeeccCCCCCC-CCCC
Confidence            37999999999999999        9999999999875432 122  34332  222  1 22233333221111 1223


Q ss_pred             CceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC--------CCCceeeeeecCC
Q 016689          191 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRVGD  262 (384)
Q Consensus       191 g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~--------~~~~~hV~L~V~D  262 (384)
                      +..+++|.|+|+++++++|+++|+++..+|.... +.++.++|+||+||.|||++..+.        +.++.|+.|.|.|
T Consensus        96 ~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~-~~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D  174 (282)
T 3oxh_A           96 PIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIG-DAGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDK  174 (282)
T ss_dssp             CEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEET-TTEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSC
T ss_pred             CcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecC-CCeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCC
Confidence            4567999999999999999999999988776664 356789999999999999998653        4579999999999


Q ss_pred             hHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHHHHHHHC
Q 016689          263 LDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLS  342 (384)
Q Consensus       263 le~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~~~l~~~  342 (384)
                      ++++++||+++|||++......+...+..+  ..+.   .....+... .   ....+..+|++|.|+|+++++++++++
T Consensus       175 ~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~-~---~~~~~~~~~~~~~v~dvd~~~~~~~~~  245 (282)
T 3oxh_A          175 PDLALAFYEAVVGLTHSSMEIAAGQNYRVL--KAGD---AEVGGCMEP-P---MPGVPNHWHVYFAVDDADATAAKAAAA  245 (282)
T ss_dssp             HHHHHHHHHHHHCCEEEEC-------CEEE--EETT---EEEEEEECC-S---STTCCSEEEEEEECSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCeeeeccCCCCcceEEE--EcCC---ccEeeecCC-C---CCCCCCeEEEEEEeCCHHHHHHHHHHc
Confidence            999999999999999875431222233333  2221   122222211 1   122346789999999999999999999


Q ss_pred             CCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          343 GGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       343 G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+++..+|...+++ ++.+||+|||||.|||++..
T Consensus       246 G~~~~~~p~~~~~~-~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          246 GGQVIAEPADIPSV-GRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             TCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CCEEecCCeEcCCC-eEEEEEECCCCCEEEEEecC
Confidence            99999888877764 58999999999999999965

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=2.9e-30  Score=246.07  Aligned_cols=239  Identities=18%  Similarity=0.244  Sum_probs=171.2

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      +.++++||.|.|+|+++++        +||+++|||++.....  .+   .+++..+....+..+.+...       ...
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~--------~FY~~~lG~~~~~~~~--~~---~~~l~~~~~~~~~~l~~~~~-------~~~   63 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKAL--------EHYVELLGLIEMDRDD--QG---RVYLKAWTEVDKFSLVLREA-------DEP   63 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEECT--TS---CEEEECTTCCBSCSEEEEEC-------SSC
T ss_pred             ccceeeeEEEEeCCHHHHH--------HHHHHccCCEEEeecC--CC---cEEEEecCCCCceEEEEccC-------CCC
Confidence            4578999999999999999        9999999999976532  11   24555432222222333211       124


Q ss_pred             CceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC-------------------
Q 016689          191 GFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------------------  248 (384)
Q Consensus       191 g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~-------------------  248 (384)
                      +..|++|.|   +|+++++++|+++|+++...|.....+..+.++|+|||||.|||++..+                   
T Consensus        64 ~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~  143 (307)
T 1mpy_A           64 GMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDL  143 (307)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCC
T ss_pred             CcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccC
Confidence            788999999   7899999999999999987664222234567889999999999998532                   


Q ss_pred             ---CCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCc-eeE
Q 016689          249 ---TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG-YAQ  324 (384)
Q Consensus       249 ---~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g-~~h  324 (384)
                         ...+++||.|.|.|++++++||+++|||++........+.....++..+..  +..+.+...       ...+ ..|
T Consensus       144 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-------~~~g~~~h  214 (307)
T 1mpy_A          144 KGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH-------PEKGRLHH  214 (307)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC-------SSSSEEEE
T ss_pred             CCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC-------CCCCcceE
Confidence               112489999999999999999999999998765432222122233443221  223333321       1234 799


Q ss_pred             EEEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          325 IAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       325 iaf~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ++|.|+   |+++++++|+++|+++..+|...+.+.++.+||+|||||.|||++...
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            999998   567778999999999887776655433578999999999999999653

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.97  E-value=3.3e-30  Score=244.95  Aligned_cols=236  Identities=13%  Similarity=0.129  Sum_probs=172.7

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe-eeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR-KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      +.++|.|+.|.|+|+++++        +||+++|||++.. +.   ++   .+++..+..  ...+.+...       ..
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~--------~FY~~~lG~~~~~~~~---~~---~~~~~~~~~--~~~l~l~~~-------~~   58 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWR--------EYGLKVLGMVEGKGAP---EG---ALYLRMDDF--PARLVVVPG-------EH   58 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHH--------HHHHHTSCCEECSSCC---SS---CEEEESSSS--SCSEEEEEC-------SS
T ss_pred             CcceEEEEEEEeCCHHHHH--------HHHHHccCCEEeccCC---CC---eEEEEeCCC--cEEEEEecC-------CC
Confidence            3568999999999999999        9999999999865 32   11   245554322  233444432       13


Q ss_pred             CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeec-CCC--------------
Q 016689          190 TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GPT--------------  249 (384)
Q Consensus       190 ~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~-~~~--------------  249 (384)
                      .++.|++|.|+|   +++++++|+++|+++...+...  ..+..+.+||+|||||.|||++. ...              
T Consensus        59 ~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~  138 (300)
T 2zyq_A           59 DRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVT  138 (300)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCccccc
Confidence            578899999975   8889999999999988766542  11345678899999999999997 221              


Q ss_pred             -CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--------CC-cEEEEEeecCCCCcceEEEEeccCCCccccCC
Q 016689          250 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--------DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG  319 (384)
Q Consensus       250 -~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--------~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g  319 (384)
                       +.+++||.|.|.|++++++||+++|||++......+        ++ .....++..+.  .++.+.+...      +..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~  210 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNP--RHHSLAFLPM------PTS  210 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSS--BSCSEEEESS------CCS
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECC--CccEEEEecC------CCC
Confidence             236899999999999999999999999987543221        11 22334444332  1334455432      123


Q ss_pred             CceeEEEEEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          320 NGYAQIAIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       320 ~g~~hiaf~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      .+..|++|.|+|+++   ++++|+++|+++..+|...+.+.++++||+|||||.|||++..
T Consensus       211 ~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          211 SGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            578999999998665   5999999999998877665554458899999999999999865

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.97  E-value=2e-29  Score=244.10  Aligned_cols=246  Identities=15%  Similarity=0.119  Sum_probs=170.5

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-CceEEEEEeeCCCCccEEEEEEecCCCCC-CcCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIG  189 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g  189 (384)
                      ..++.||.|.|+|+++++        +||+++|||++.......+ .....+++..+.......+.+........ ....
T Consensus        28 i~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~   99 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENN--------HFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGT   99 (338)
T ss_dssp             CCSEEEEEEEESCHHHHH--------HHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCB
T ss_pred             CccccEEEEEcCCHHHHH--------HHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCC
Confidence            568999999999999999        9999999999876542111 11122333322111234555543222111 1223


Q ss_pred             CCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC-----------------
Q 016689          190 TGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------  249 (384)
Q Consensus       190 ~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~-----------------  249 (384)
                      .++.|++|.|+   |+++++++|+++|+++...+. . .| .+.+||+|||||.|||++....                 
T Consensus       100 ~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~G-~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~  176 (338)
T 1zsw_A          100 NAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-Y-AN-RPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKH  176 (338)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-E-TT-EEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGG
T ss_pred             CCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-c-CC-cEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccc
Confidence            57899999999   689999999999999886544 2 33 4788999999999999987531                 


Q ss_pred             -CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          250 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       250 -~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                       ..++.||.|.|+|++++++||+++|||++.....    .+..+....+ ......+.+... .........+++|++|.
T Consensus       177 ~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~~~~~~hiaf~  250 (338)
T 1zsw_A          177 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKG-EAFGEIVVKYLD-GPTEKPGRGSIHHLAIR  250 (338)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTT-CSTTCEEEEECC-SSBCBCCBTCEEEEEEE
T ss_pred             cCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecCC-CCceEEEEeccC-CCCCCCCCCceEEEEEE
Confidence             1258899999999999999999999999876532    2322222111 110133444321 11111122467999999


Q ss_pred             cC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          329 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       329 Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+   |+++++++|+++|+++. +|....+  .+.+||+|||||.|||++..
T Consensus       251 v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~--~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          251 VKNDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHCCCcee-eeeecCc--eEEEEEECCCCCEEEEEEcC
Confidence            98   79999999999999985 5554433  58899999999999999854

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.97  E-value=6.5e-30  Score=242.52  Aligned_cols=234  Identities=18%  Similarity=0.204  Sum_probs=172.7

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++|+||.|.|+|+++++        +||+++|||++..+..  +    .+++..+.  ....+.+...       ...+
T Consensus         2 i~~i~hv~l~v~Dl~~s~--------~FY~~~LG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~-------~~~~   58 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWR--------SFLTQKLGLMEAGTTD--N----GDLFRIDS--RAWRIAVQQG-------EVDD   58 (297)
T ss_dssp             EEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEET--T----EEEEESSS--BSCSEEEEEC-------TTCE
T ss_pred             ceEEEEEEEEcCCHHHHH--------HHHHHccCCEEeecCC--C----eEEEEeCC--CcEEEEEecC-------CCCC
Confidence            358999999999999999        9999999999976531  1    34555432  1223333321       1357


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecCCC-----------------
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT-----------------  249 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~~~-----------------  249 (384)
                      +.|++|.|+   |+++++++|+++|+++...+...  ..+..+.+||+|||||.|||++....                 
T Consensus        59 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~  138 (297)
T 1lgt_A           59 LAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLT  138 (297)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCC
T ss_pred             ccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCccccccc
Confidence            889999999   89999999999999988766432  11355688999999999999986521                 


Q ss_pred             -CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecC---CCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          250 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN---PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       250 -~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                       +..++||.|.|+|++++++||+++|||++......   ++......++..+.  .++.+.+...      +...+..|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~------~~~~~~~hi  210 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLAIAAF------PLPKRIHHF  210 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------CCSSSEEEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEEEEcC------CCCCCceEE
Confidence             13699999999999999999999999998754221   11012334444322  1334455432      123578899


Q ss_pred             EEEcCCHHHHH---HHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDDVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdDvd~~~---~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|+|++++.   ++ +++|+++..+|.+.+.+..+++||+|||||.|||++..
T Consensus       211 af~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          211 MLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            99999988776   88 99999999888776655456799999999999999875

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.97  E-value=1e-29  Score=243.41  Aligned_cols=236  Identities=21%  Similarity=0.304  Sum_probs=177.3

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      ++..++.|+.|.|+|+++++        +||+++|||++.....    .  .+++..+....+..+.+...       ..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~--------~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~-------~~   62 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEK--------AFYADVWGLEPVGEDA----N--NAWFKAQGADEHHVVQLRRA-------DE   62 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHH--------HHHHHTTCCEEEEECS----S--EEEEECTTSCCSCSEEEEEC-------SS
T ss_pred             eecceeeEEEEecCCHHHHH--------HHHHhCcCCEEeeecC----C--eEEEEECCCCCCEEEEEEEC-------CC
Confidence            34568999999999999999        9999999999875431    1  34555432101234555432       13


Q ss_pred             CCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccc-cCCCEEEEEEECCCCCEEEEeecCCC------------CCCc
Q 016689          190 TGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPV-KGGNTVIAFIEDPDGYKFELLERGPT------------PEPL  253 (384)
Q Consensus       190 ~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~-~~g~~~~~~~~DPdG~~iel~~~~~~------------~~~~  253 (384)
                      .++.|++|.|   +|+++++++|+++|+++..++... ..++.+.++++||+||.|||++..+.            +.++
T Consensus        63 ~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l  142 (310)
T 3b59_A           63 NRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKI  142 (310)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEE
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEe
Confidence            5788999999   689999999999999998777541 12345677899999999999987531            2359


Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHH
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  333 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd  333 (384)
                      .||.|.|+|++++++||+++|||++..+..  + .  ..++..+.  .++.+.+...       . .++.|++|.|+|++
T Consensus       143 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~-~--~~fl~~~~--~~~~l~l~~~-------~-~g~~hi~f~v~d~d  207 (310)
T 3b59_A          143 SHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D-F--MCFLRCNS--AHHRIAILPG-------P-PCLNHVAYDMLSVD  207 (310)
T ss_dssp             EEEEEEETTHHHHHHHHHHTSCCEEEEEET--T-T--EEEEESSS--BSCSEEEEES-------S-SEEEEEEEECSSHH
T ss_pred             ceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C-e--EEEEecCC--CcceEEEECC-------C-CceEEEEEEcCCHH
Confidence            999999999999999999999999876542  1 1  23344322  2344555431       1 57899999999977


Q ss_pred             HH---HHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcccc
Q 016689          334 KT---AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  381 (384)
Q Consensus       334 ~~---~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~  381 (384)
                      ++   +++|+++|+++..+|++++.+.++++||+|||||.||+.+..+...
T Consensus       208 ~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d  258 (310)
T 3b59_A          208 DMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVD  258 (310)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBCC
T ss_pred             HHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEec
Confidence            76   9999999999988887765544688999999999999999765443

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.97  E-value=8.5e-30  Score=241.13  Aligned_cols=234  Identities=14%  Similarity=0.157  Sum_probs=170.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++++||.|.|+|+++++        +||+++|||++..+..  +    .+++..+..  ...+.+...       ...+
T Consensus         2 i~~i~hv~l~v~Dl~~a~--------~FY~~~lG~~~~~~~~--~----~~~l~~~~~--~~~l~~~~~-------~~~~   58 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWD--------HFLTKSVGLMAAGSAG--D----AALYRADQR--AWRIAVQPG-------ELDD   58 (292)
T ss_dssp             CCEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEET--T----EEEEESSSB--SCSEEEEEC-------TTCE
T ss_pred             ceeEEEEEEEeCCHHHHH--------HHHHhcCCCEEeecCC--C----eEEEEcCCc--eEEEEEccC-------CCCC
Confidence            468999999999999999        9999999999876531  1    244554321  222333221       1247


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecCCC-----------------
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT-----------------  249 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~~~-----------------  249 (384)
                      +.|++|.|+   |+++++++|+++|+++...|...  ..+..+.++|+|||||.|||++....                 
T Consensus        59 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~  138 (292)
T 1kw3_B           59 LAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVT  138 (292)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCC
T ss_pred             ccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCcccccc
Confidence            889999998   89999999999999998776531  11345678899999999999986421                 


Q ss_pred             -CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--CC-cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          250 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       250 -~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                       +.+++||.|.|+|++++++||+++|||++......+  ++ .....++..+..  ++.+.+....      ...+.+|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~hi  210 (292)
T 1kw3_B          139 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAFP------IPKRIHHF  210 (292)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECCS------CSSSEEEE
T ss_pred             CCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecCC------CCCceEEE
Confidence             125899999999999999999999999987543221  11 123344443221  2334444311      13578999


Q ss_pred             EEEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCC-eEEEEecC
Q 016689          326 AIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNL  377 (384)
Q Consensus       326 af~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iElve~~  377 (384)
                      +|.|+|+++   ++++|+ +|+++..+|+..+.+..+++||+||||| .|||++..
T Consensus       211 af~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          211 MLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            999998665   677899 9999988887666544578899999999 99999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.97  E-value=9.2e-30  Score=242.67  Aligned_cols=235  Identities=14%  Similarity=0.169  Sum_probs=172.0

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+++||.|.|+|+++++        +||+++|||++....  .+ .  .+++..+..  +..+.+...       ...+
T Consensus         4 i~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~--~~-~--~~~~~~~~~--~~~l~l~~~-------~~~~   61 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWR--------DYAAGIMGMQVVDDG--ED-D--RIYLRMDRW--HHRIVLHAD-------GSDD   61 (305)
T ss_dssp             CCEEEEEEEECSCHHHHH--------HHHTTTTCCEEECCS--CT-T--EEEEECSSB--SCSEEEECS-------SCCE
T ss_pred             cceeeEEEEEeCCHHHHH--------HHHHhccCCEEeecc--CC-C--eEEEEeCCC--eEEEEEEEC-------CCCC
Confidence            468999999999999999        999999999987521  12 2  345554421  234555432       1357


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeec-CC-----------------
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP-----------------  248 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~-~~-----------------  248 (384)
                      +.|++|.|+   |+++++++|+++|+++..+|...  ..+..+.+|++|||||.|||++. ..                 
T Consensus        62 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~  141 (305)
T 2wl9_A           62 LAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFV  141 (305)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBC
T ss_pred             eEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCccccee
Confidence            889999997   69999999999999998776543  23567788999999999999986 21                 


Q ss_pred             -CCCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--CC-cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeE
Q 016689          249 -TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQ  324 (384)
Q Consensus       249 -~~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~h  324 (384)
                       .+.+++||.|.|+|++++++|| ++|||++......+  ++ .....++..+..  ++.+.+...      ....+..|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceE
Confidence             0136999999999999999999 99999986432211  11 122234443221  233444321      12357899


Q ss_pred             EEEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          325 IAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       325 iaf~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ++|.|+|   +++++++|+++|+++..+|+..+.+..+++||+|||||.|||+...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999988   6668889999999998887766554457889999999999999865

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.97  E-value=1.9e-29  Score=246.89  Aligned_cols=236  Identities=19%  Similarity=0.177  Sum_probs=181.1

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      +++|+||.|.|+|+++++        +||+++|||+++.+.+      ..+++..+.+..++.+.+...       ...+
T Consensus        15 I~rl~hV~l~V~DLe~s~--------~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~g   73 (365)
T 4ghg_A           15 ILRCAYAELVVTDLAKSR--------NFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAA   73 (365)
T ss_dssp             EEEEEEEEEEESCHHHHH--------HHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCE
T ss_pred             CCEEEEEEEEeCCHHHHH--------HHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCC
Confidence            469999999999999999        9999999999986532      246666544444555666543       2358


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC---------------CCCc
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPL  253 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~---------------~~~~  253 (384)
                      +.|++|.|.+   ++++.++|+++|+++...+.....+.+..++|+|||||.|||+...+.               +.++
T Consensus        74 l~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rl  153 (365)
T 4ghg_A           74 LKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRL  153 (365)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEE
T ss_pred             cceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcce
Confidence            9999999985   788999999999998875544333455678999999999999864321               2369


Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHH
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  333 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd  333 (384)
                      .||.|.|.|++++.+||++ |||++......+++.....++.+...  ++.+.+...       ..++++|++|.|+|++
T Consensus       154 gHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~~-------~~~~lhHvaf~v~d~d  223 (365)
T 4ghg_A          154 DHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTGG-------NGPRLHHVAFSTHEKH  223 (365)
T ss_dssp             EEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHH
T ss_pred             eEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeecC-------CCCceeEEEEecCCHH
Confidence            9999999999999999965 99999877666665566667776432  444444431       2358999999998876


Q ss_pred             H---HHHHHHHCCCe--EecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          334 K---TAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       334 ~---~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +   +.++++++|+.  +.++|+++..++..++||+||+||.||+...-.
T Consensus       224 ~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          224 NIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             HHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            6   56788889984  678888877666688999999999999988654

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.97  E-value=1.5e-29  Score=240.90  Aligned_cols=237  Identities=15%  Similarity=0.104  Sum_probs=170.7

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      +..++++|+.|.|+|+++++        +||+++|||++..+..  +   ..+|+..+.  .++.+.+...       ..
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~~--~---~~~~~~~~~--~~~~l~l~~~-------~~   62 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWK--------SFATDMLGLQVLDEGE--K---DRFYLRMDY--WHHRIVVHHN-------GQ   62 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHH--------HHHHHTTCCEEECCSC--S---SEEEEESSS--BSCSEEEESS-------CC
T ss_pred             ccccEeeEEEEEeCCHHHHH--------HHHHhcCCCEEEeccC--C---cceEEEeCC--CceEEEEecC-------CC
Confidence            34578999999999999999        9999999999875421  1   134554422  2233444422       12


Q ss_pred             CCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCcccc--CCCEEEEEEECCCCCEEEEeecCC----C--------C--
Q 016689          190 TGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T--------P--  250 (384)
Q Consensus       190 ~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iel~~~~~----~--------~--  250 (384)
                      .++.|++|.|+   |+++++++|+++|+++...|....  .+..+.+||+|||||.|||++..+    .        +  
T Consensus        63 ~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~  142 (302)
T 2ehz_A           63 DDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGK  142 (302)
T ss_dssp             SEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSC
T ss_pred             CCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccc
Confidence            47889999995   689999999999999887765432  145678899999999999997531    1        1  


Q ss_pred             -----CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--CC-cEEEEEeecCCCCcceEEEEeccCCCccccCCCce
Q 016689          251 -----EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGY  322 (384)
Q Consensus       251 -----~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~  322 (384)
                           .+++||.|.|+|++++++|| ++|||++......+  ++ .....++..+..  .+.+.+...      ...++.
T Consensus       143 ~~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~  213 (302)
T 2ehz_A          143 FVTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRL  213 (302)
T ss_dssp             BCCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSE
T ss_pred             eecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCce
Confidence                 17899999999999999999 99999986432211  21 223344443321  233344321      113578


Q ss_pred             eEEEEEcCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          323 AQIAIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       323 ~hiaf~VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|++|.|+|+++   ++++|+++|+++..+|...+.+..+++||+|||||.|||+...
T Consensus       214 ~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          214 NHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            999999998765   6779999999998887766554457899999999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.96  E-value=1.1e-26  Score=226.70  Aligned_cols=250  Identities=17%  Similarity=0.227  Sum_probs=180.0

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC------
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------  185 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------  185 (384)
                      .++++||.+.|+|+++++        +||+++|||+++.+.....+  ..+.+..|    ...+.+.....+..      
T Consensus         3 i~~l~hv~~~v~D~~~a~--------~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~~~~~   68 (357)
T 2r5v_A            3 NFEIDYVEMYVENLEVAA--------FSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPAAAYL   68 (357)
T ss_dssp             CCEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHHHHHH
T ss_pred             CceEEEEEEEECCHHHHH--------HHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHHHHHH
Confidence            468999999999999999        99999999999876543322  23344433    34566665322211      


Q ss_pred             CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC----------------
Q 016689          186 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------  249 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~----------------  249 (384)
                      ...+.++.|++|.|+|+++++++++++|+++..+|.....|....+.++||+|..++|+++...                
T Consensus        69 ~~~g~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~  148 (357)
T 2r5v_A           69 QTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTN  148 (357)
T ss_dssp             HHHSSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCC
T ss_pred             HhcCCeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccc
Confidence            1235799999999999999999999999999877654333455677899999999999986310                


Q ss_pred             --C-----CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeec--CCCCcEEEEEeecCCCCcceEEEEeccCCC--cc-
Q 016689          250 --P-----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD--NPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TE-  315 (384)
Q Consensus       250 --~-----~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~lel~~~~~~--~~-  315 (384)
                        +     .+++||.|.|.  |++++++||+++|||++....+  .+.......++..+.  ....+++......  .. 
T Consensus       149 ~~~~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~  226 (357)
T 2r5v_A          149 HGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQ  226 (357)
T ss_dssp             TTCTTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCH
T ss_pred             cCCCCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCch
Confidence              1     14899999999  9999999999999999875432  122223444555432  2456666553211  01 


Q ss_pred             ---c---cCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccC-------CCCC---------ceEEEEECCCCCeEEE
Q 016689          316 ---Y---DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-------PGIN---------TKITACLDPDGWKSVF  373 (384)
Q Consensus       316 ---~---~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~-------~~~~---------~~~~~~~DPdG~~iEl  373 (384)
                         +   ..+.+++||+|.|+|+++++++|+++|+++...|...       .+..         ..++|++||||++|||
T Consensus       227 ~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi  306 (357)
T 2r5v_A          227 IDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQI  306 (357)
T ss_dssp             HHHHHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEE
T ss_pred             hHHHHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEE
Confidence               1   1357899999999999999999999999988776321       0000         1379999999999999


Q ss_pred             EecC
Q 016689          374 VDNL  377 (384)
Q Consensus       374 ve~~  377 (384)
                      ++.+
T Consensus       307 ~t~~  310 (357)
T 2r5v_A          307 FTAS  310 (357)
T ss_dssp             EBCC
T ss_pred             EccC
Confidence            9844

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=5.5e-25  Score=216.55  Aligned_cols=254  Identities=20%  Similarity=0.297  Sum_probs=182.1

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ceEEEEEeeCCCCccEEEEEEecCCCCCC-
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDKY-  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~~-  186 (384)
                      +..++++||.+.|+|+++++        +||+++|||+++.+...+.+  ....+++..+    ...+++.....+... 
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~--------~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~   85 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAA--------HYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPW   85 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHH--------HHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHH
T ss_pred             CcCceEEEEEEEECCHHHHH--------HHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcc
Confidence            34579999999999999999        99999999999876432211  2344555544    346667654222211 


Q ss_pred             ---------cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCcccc--CCCEEEEEEECCCCCEEEEeecC-------C
Q 016689          187 ---------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG-------P  248 (384)
Q Consensus       187 ---------~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iel~~~~-------~  248 (384)
                               ..+.|+.|++|.|+|+++++++++++|+++..+|....  .|....+.++||+|+.++|+++.       +
T Consensus        86 ~~~~~~~~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p  165 (381)
T 1t47_A           86 GHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLP  165 (381)
T ss_dssp             HHHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSST
T ss_pred             hhHHHHHHHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCC
Confidence                     22679999999999999999999999999998775432  23345788999999999999862       1


Q ss_pred             ------C----C-----CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeec-----CCCCcEEEEEeecCCCCcceEEE
Q 016689          249 ------T----P-----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD-----NPDYKYTIAVMGYGPEDKNAVLE  306 (384)
Q Consensus       249 ------~----~-----~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~le  306 (384)
                            .    +     .+++||.+.|.  |++++++||+++|||++....+     .+.......++..+.  ....++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~  243 (381)
T 1t47_A          166 GYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFP  243 (381)
T ss_dssp             TCEECCCSSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEE
T ss_pred             CCccccccccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEE
Confidence                  0    1     24899999999  9999999999999999876532     223334445554322  235566


Q ss_pred             EeccC--CCcc-------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCC--------C--------CceEE
Q 016689          307 LTYNH--GVTE-------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG--------I--------NTKIT  361 (384)
Q Consensus       307 l~~~~--~~~~-------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~--------~--------~~~~~  361 (384)
                      +..+.  ....       ...+.|++||||.|+|+++++++|+++|+++...|...-.        .        ...++
T Consensus       244 l~~~~~~~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il  323 (381)
T 1t47_A          244 INEPALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKIL  323 (381)
T ss_dssp             EEEECCSSSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCE
T ss_pred             EecCCcCCCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeE
Confidence            65543  1111       1246789999999999999999999999998877643210        0        01357


Q ss_pred             EEECCCCCeEEEEecC
Q 016689          362 ACLDPDGWKSVFVDNL  377 (384)
Q Consensus       362 ~~~DPdG~~iElve~~  377 (384)
                      |-+||+|.++++++.+
T Consensus       324 ~d~d~~g~llqift~~  339 (381)
T 1t47_A          324 ADRDEDGYLLQIFTKP  339 (381)
T ss_dssp             EEECSSCEEEEEEBCC
T ss_pred             EeeCCCCeEEEEeccC
Confidence            7899999888888755

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.92  E-value=2.4e-23  Score=207.18  Aligned_cols=224  Identities=19%  Similarity=0.283  Sum_probs=161.4

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC--CceEEEEEeeCCCCccEEEEEEecCCCC-----
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD-----  184 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~-----  184 (384)
                      .++++||.|.|+|+++|+        +||+++|||+++.+.+.+.  ..+..+++..+    ...++|.....+.     
T Consensus        23 i~~i~HV~i~V~Dle~a~--------~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~   90 (424)
T 1sqd_A           23 VKRFHHIEFWCGDATNVA--------RRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGE   90 (424)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTC
T ss_pred             CCeEEEEEEEECCHHHHH--------HHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccc
Confidence            468999999999999999        9999999999887654331  23444555543    3456665442211     


Q ss_pred             --------------C------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          185 --------------K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       185 --------------~------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                                    .      ...+.|+.|++|.|+|+++++++++++|+++..+|.... +......+++|+|+.++|+
T Consensus        91 ~~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~-~~~~~~~i~~~Gg~~~~lv  169 (424)
T 1sqd_A           91 IKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLN-EAVTIAEVKLYGDVVLRYV  169 (424)
T ss_dssp             CGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEET-TTEEEEEEEEETTEEEEEE
T ss_pred             cccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCC-CceEEEEEEcCCCcEEEEE
Confidence                          0      123468999999999999999999999999998876543 2345666777777777777


Q ss_pred             ecCCC--------------------C-----CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-----CcEEEEEe
Q 016689          245 ERGPT--------------------P-----EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----YKYTIAVM  294 (384)
Q Consensus       245 ~~~~~--------------------~-----~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l  294 (384)
                      ++...                    +     .+++||++.|.|++++++||+++|||++.++.+.++     .+....++
T Consensus       170 d~~g~~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l  249 (424)
T 1sqd_A          170 SYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVL  249 (424)
T ss_dssp             EECCC------CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEE
T ss_pred             ecCCCCCCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEE
Confidence            65321                    1     148999999999999999999999999987764332     23344445


Q ss_pred             ecCCCCcceEEEEeccCC---Cc----cc---cCCCceeEEEEEcCCHHHHHHHHHH----CCCeEecCC
Q 016689          295 GYGPEDKNAVLELTYNHG---VT----EY---DKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  350 (384)
Q Consensus       295 ~~~~~~~~~~lel~~~~~---~~----~~---~~g~g~~hiaf~VdDvd~~~~~l~~----~G~~i~~~p  350 (384)
                      ....  ....+++.++..   ..    .+   ..+.|++||||.|+|+++++++|++    .|+++...|
T Consensus       250 ~~~~--g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          250 ASND--EMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             ECTT--SCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             EcCC--CcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            4332  246677766431   11    11   3577999999999999999999999    899988765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.90  E-value=1.8e-22  Score=200.63  Aligned_cols=224  Identities=17%  Similarity=0.210  Sum_probs=160.0

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC--CceEEEEEeeCCCCccEEEEEEecCCCC-----
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD-----  184 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~-----  184 (384)
                      .++++||.|.|+|+++++        +||+++|||+++.+...+.  .....+++..|    ...++|.......     
T Consensus        29 i~~l~hV~i~V~Dle~a~--------~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~   96 (418)
T 1sp8_A           29 TLAFHHVELWCADAASAA--------GRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAAT   96 (418)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGG
T ss_pred             CceEEEEEEEeCCHHHHH--------HHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccc
Confidence            468999999999999999        9999999999887654332  23455666654    3456665442220     


Q ss_pred             --------C------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC-
Q 016689          185 --------K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-  249 (384)
Q Consensus       185 --------~------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~-  249 (384)
                              .      ...+.|+.|++|.|+|+++++++++++|+++..+|.... +..+...+++|.|..++|+++... 
T Consensus        97 ~p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~-~~~~~~~i~~~Gg~~~~lvd~~~~~  175 (418)
T 1sp8_A           97 AALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLG-RGFRLAEVELYGDVVLRYVSYPDGA  175 (418)
T ss_dssp             CSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEE-TTEEEEEEEEETTEEEEEEECCTTG
T ss_pred             cccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEecccccc-CceEEEEEecCCCEEEEEEccCCCC
Confidence                    0      123468999999999999999999999999988775432 234455566666666666655310 


Q ss_pred             ----------------C-----CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-----CcEEEEEeecCCCCcce
Q 016689          250 ----------------P-----EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----YKYTIAVMGYGPEDKNA  303 (384)
Q Consensus       250 ----------------~-----~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~  303 (384)
                                      +     .+++||++.|.|++++++||+++|||++.+....++     .+....++..+.  ...
T Consensus       176 ~~~~f~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i  253 (418)
T 1sp8_A          176 AGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENV  253 (418)
T ss_dssp             GGSSSSTTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCC
T ss_pred             CCcccCCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcE
Confidence                            1     148999999999999999999999999987654322     123334454332  246


Q ss_pred             EEEEeccCC---Cc----cc---cCCCceeEEEEEcCCHHHHHHHHHH----CCCeEecCC
Q 016689          304 VLELTYNHG---VT----EY---DKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  350 (384)
Q Consensus       304 ~lel~~~~~---~~----~~---~~g~g~~hiaf~VdDvd~~~~~l~~----~G~~i~~~p  350 (384)
                      .+++.++..   ..    .+   ..++|++||||.|+|+++++++|++    .|+++...|
T Consensus       254 ~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          254 LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             EEEEEEECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             EEEEeecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            677765421   11    11   3578999999999999999999999    799998775

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.90  E-value=8.5e-22  Score=193.46  Aligned_cols=225  Identities=20%  Similarity=0.290  Sum_probs=167.5

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-c-eEEEEEeeCCCCccEEEEEEecCCCCC----
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-R-YTNAFLGYGPEDSHFVVELTYNYGVDK----  185 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-~-~~~~~l~~g~~~~~~~lel~~~~~~~~----  185 (384)
                      .++++||.+.|+|+++++        +||+++|||++....+.+.+ + ...+++..|    ...+++.....+..    
T Consensus         9 i~~i~Hv~i~V~d~~~a~--------~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a   76 (393)
T 3isq_A            9 FLHFHSVTFWVGNAKQAA--------SFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMG   76 (393)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHH
T ss_pred             CceEeEEEEEECCHHHHH--------HHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHH
Confidence            468999999999999999        99999999999876543322 2 224455544    34566655322221    


Q ss_pred             ---CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecCC-----------C
Q 016689          186 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP-----------T  249 (384)
Q Consensus       186 ---~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~~-----------~  249 (384)
                         ...|.|+.|++|.|+|+++++++++++|+++..+|.....  |..+.+.+++|.|..+.|+++..           .
T Consensus        77 ~fl~~hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~  156 (393)
T 3isq_A           77 DHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAP  156 (393)
T ss_dssp             HHHHHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSC
T ss_pred             HHHHhcCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccc
Confidence               1246799999999999999999999999999988865543  34567789999999999998631           0


Q ss_pred             ----------C----CCceeeeeecCC--hHHHHHHHHHhhCCeEeeeec-----CCCCcEEEEEeecCCCCcceEEEEe
Q 016689          250 ----------P----EPLCQVMLRVGD--LDRAINFYKKAFGMELLRKRD-----NPDYKYTIAVMGYGPEDKNAVLELT  308 (384)
Q Consensus       250 ----------~----~~~~hV~L~V~D--le~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~lel~  308 (384)
                                +    .+++||.+.|.|  ++++++||+++|||+.....+     .+........+..+.  ....++|.
T Consensus       157 ~~~~~~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~  234 (393)
T 3isq_A          157 AFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPIN  234 (393)
T ss_dssp             SCCCTTGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEE
T ss_pred             ccccccccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEe
Confidence                      1    138999999998  999999999999999976643     122344555554322  35677776


Q ss_pred             ccCC--Ccc-------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC
Q 016689          309 YNHG--VTE-------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       309 ~~~~--~~~-------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p  350 (384)
                      .+..  ...       ...+.|++||||.|+|+++++++|+++|+++...|
T Consensus       235 ep~~~~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          235 EPAPGKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             EEECCSBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCCCCCCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            6432  111       12478999999999999999999999999998876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.89  E-value=4.3e-22  Score=194.23  Aligned_cols=244  Identities=15%  Similarity=0.083  Sum_probs=168.2

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC----C
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----Y  186 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~  186 (384)
                      ...+++||.+.|+|+++++        +|| ++|||+++.+...  ..  ..++..+    ...+.+....+...    .
T Consensus         9 ~i~~l~hV~~~V~D~~~~~--------~fy-~~LGf~~~~~~~~--~~--~~l~~~g----~~~l~l~~~~~~~~~~~~~   71 (357)
T 1cjx_A            9 GLMGFEFIEFASPTPGTLE--------PIF-EIMGFTKVATHRS--KN--VHLYRQG----EINLILNNEPNSIASYFAA   71 (357)
T ss_dssp             CEEEEEEEEEECSSTTSSH--------HHH-HHTTCEEEEEESS--SS--EEEEEET----TEEEEEECCSSSHHHHHHH
T ss_pred             ccceEEEEEEEeCCHHHHH--------HHH-HHCCCEEEEEeCC--ee--EEEEecC----CEEEEEECCCCchhhhhhh
Confidence            3568999999999999999        999 7999999865421  11  3334433    23444443221110    1


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC-----------------
Q 016689          187 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------  249 (384)
Q Consensus       187 ~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~-----------------  249 (384)
                      ..+.++.|++|.|+|+++++++++++|+++..+|..  .|......+++|+|..++|+++...                 
T Consensus        72 ~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~  149 (357)
T 1cjx_A           72 EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVER  149 (357)
T ss_dssp             HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCS
T ss_pred             hcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCcccc
Confidence            245799999999999999999999999998776532  2333455678888888888765421                 


Q ss_pred             -C-----CCceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCC--CcE--EEEEeecCCCCcceEEEEecc-CCCcc-
Q 016689          250 -P-----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKY--TIAVMGYGPEDKNAVLELTYN-HGVTE-  315 (384)
Q Consensus       250 -~-----~~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~--~~~--~~~~l~~~~~~~~~~lel~~~-~~~~~-  315 (384)
                       +     .+++||.+.|.  |++++++||+++|||++....+.++  ...  ...+..+    ....+++..+ ..... 
T Consensus       150 ~~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~  225 (357)
T 1cjx_A          150 NPVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQ  225 (357)
T ss_dssp             SCCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSH
T ss_pred             CCCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCCh
Confidence             1     14889999999  9999999999999999876543222  122  2222222    2456677654 21111 


Q ss_pred             ------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEec-CCcc-------CCCCCc---------eEEEEEC----CCC
Q 016689          316 ------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR-EPGP-------LPGINT---------KITACLD----PDG  368 (384)
Q Consensus       316 ------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~-~p~~-------~~~~~~---------~~~~~~D----PdG  368 (384)
                            ...+.|++||||.|+|+++++++|+++|+++.. .|..       ..+..+         .++|-+|    |+|
T Consensus       226 ~~~~~~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g  305 (357)
T 1cjx_A          226 IEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKR  305 (357)
T ss_dssp             HHHHHHHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEE
T ss_pred             HHHhHHhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCC
Confidence                  124678999999999999999999999999887 5511       011111         2477788    889


Q ss_pred             CeEEEEecC
Q 016689          369 WKSVFVDNL  377 (384)
Q Consensus       369 ~~iElve~~  377 (384)
                      ++++|++.+
T Consensus       306 ~llqift~~  314 (357)
T 1cjx_A          306 LLLQIFSET  314 (357)
T ss_dssp             EEEEEEBCC
T ss_pred             eEEEEeccC
Confidence            998888754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.84  E-value=6.1e-20  Score=152.19  Aligned_cols=129  Identities=57%  Similarity=1.062  Sum_probs=102.4

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      +++.|+.|.|+|+++++        +||+++|||++......+++.+..+++..+.......+++...........+.++
T Consensus         1 m~l~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~   72 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSI--------DFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAY   72 (135)
T ss_dssp             CCEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSE
T ss_pred             CcceEEEEEeCCHHHHH--------HHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCc
Confidence            47999999999999999        9999999999987665555567778887654323457777654443333455688


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .|++|.|+|+++++++|+++|+++..+|...+.|..+.+|++|||||.|||++..+.
T Consensus        73 ~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           73 GHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             cEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999999999999999999887766665656788999999999999997653

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.81  E-value=9.8e-19  Score=144.85  Aligned_cols=127  Identities=49%  Similarity=0.912  Sum_probs=99.0

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      +++|+.|.|.|++++++||+++|||++......+++.+.+.++..+.......+++...........+.+..|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            58999999999999999999999999987654444556666676544323566777654333233345688899999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +++++++++++|+++..+|...+++..+.+||+|||||.|||++...
T Consensus        82 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             HHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            99999999999999998877666654468999999999999999764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.80  E-value=1.2e-19  Score=155.54  Aligned_cols=128  Identities=21%  Similarity=0.197  Sum_probs=90.1

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC---
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---  185 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---  185 (384)
                      +...|||.|+.|.|+|+++|+        +||+++|||++......++.  ....+..........+.+.....+..   
T Consensus        21 ~~~~Mri~~v~I~V~Dle~A~--------~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   90 (155)
T 4g6x_A           21 QSNAMRIHLTNVFVDDQAKAE--------SFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPF   90 (155)
T ss_dssp             --CCCCCCEEEEEESCHHHHH--------HHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHH
T ss_pred             ccCceEEEEEEEEeCCHHHHH--------HHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCcccccc
Confidence            345569999999999999999        99999999998766544332  33333332222222222222211111   


Q ss_pred             --CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          186 --YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       186 --~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                        ...+.|..|++|.|+|+++++++|+++|+++..+|...++  ++.+||+|||||+|||+|..+
T Consensus        91 ~~~~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           91 KEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             HHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC--
T ss_pred             ccccccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEECC
Confidence              1123578899999999999999999999999988876653  467899999999999999653

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.80  E-value=8.9e-19  Score=144.23  Aligned_cols=124  Identities=26%  Similarity=0.361  Sum_probs=95.1

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCC----
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY----  186 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~----  186 (384)
                      |..+++|+.|.|+|+++++        +||+++|||++......++.....+++..+    ...+++.........    
T Consensus         2 m~~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~   69 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAA--------AFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGF   69 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHH--------HHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHH
T ss_pred             ccceeeeEEEEeCCHHHHH--------HHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhh
Confidence            5679999999999999999        999999999987665444445667788764    235566543332211    


Q ss_pred             ---cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEE--ECCCCCEEEEeec
Q 016689          187 ---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLER  246 (384)
Q Consensus       187 ---~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~--~DPdG~~iel~~~  246 (384)
                         ..+.|+.|++|.|+|+++++++|+++|+++..++.....++.+..|+  +|||||.|||+|.
T Consensus        70 ~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           70 LQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             HHHCTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             hhccCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence               23568999999999999999999999999887654444445556666  8999999999973

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.79  E-value=1.5e-18  Score=143.87  Aligned_cols=124  Identities=23%  Similarity=0.247  Sum_probs=95.4

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeee-eCCCCceEEEEEeeCCCCccEEEEEEecCCCCCC--
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKR-DIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~--  186 (384)
                      .|.++++||+|.|+|+++|+        +||+ +|||++.... ..+......+|+..+    ...+++.........  
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~--------~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~   69 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSAL--------KKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPIN   69 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHH--------HHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHH
T ss_pred             ccceeeCEEEEEECCHHHHH--------HHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHH
Confidence            46789999999999999999        9999 9999986542 233445567777764    346777654332211  


Q ss_pred             ---cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCcccc-CCCEEEEEEECCCCCEEEEeec
Q 016689          187 ---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       187 ---~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~-~g~~~~~~~~DPdG~~iel~~~  246 (384)
                         ..+.|+.|++|.|+|+++++++|+++|+++..+|.+.. .++.+.+|++|||||+|||+|.
T Consensus        70 ~~~~~~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           70 KTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             HHTTTSCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             HHHhcCCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence               11678999999999999999999999999887654322 2456789999999999999984

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.79  E-value=2.9e-18  Score=144.58  Aligned_cols=125  Identities=53%  Similarity=0.888  Sum_probs=96.4

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      ++.+++.|+.|.|+|+++++        +||+++|||++......+++.+..+++..+....+..+++...........+
T Consensus         4 m~~~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~   75 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSI--------KFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHD   75 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCC
T ss_pred             CccceeEEEEEEeCCHHHHH--------HHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCC
Confidence            44678999999999999999        9999999999987654444456677887654322457777665443333445


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          190 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .++.|++|.|+|+++++++|+++|+++..+     .|...++|++|||||.|||++..
T Consensus        76 ~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           76 EAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             SSEEEEEEEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             CCceEEEEEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            688999999999999999999999998764     33444558999999999999864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.78  E-value=4.9e-18  Score=139.73  Aligned_cols=122  Identities=27%  Similarity=0.361  Sum_probs=94.7

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEe-------cCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY-------NYGV  183 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~-------~~~~  183 (384)
                      +.++++||.|.|+|+++++        +||+++|||++..+...++.....+++..+    ...+++..       ....
T Consensus         2 ~i~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~   69 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSY--------EFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAP   69 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHH--------HHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCC
T ss_pred             ceeeEeEEEEEeCCHHHHH--------HHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCC
Confidence            4579999999999999999        999999999998776555555456777764    23666665       2221


Q ss_pred             C---CCc-CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          184 D---KYD-IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       184 ~---~~~-~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      .   ... .+.|+.|++|.|+|+++++++|+++|+++...+.... ++.+.+|++|||||.|||+|
T Consensus        70 ~~~~~~~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           70 PERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDY-TGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCCCCSSSCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTT-SCCEEEEEECTTCCEEEEEC
T ss_pred             ccccCCCCCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCC-CceEEEEEECCCCCEEEEeC
Confidence            1   111 4568899999999999999999999999986655433 34568899999999999986

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.78  E-value=3.2e-18  Score=150.75  Aligned_cols=128  Identities=37%  Similarity=0.612  Sum_probs=100.6

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCc---------------cEEE
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS---------------HFVV  175 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~l  175 (384)
                      ...+++|+.|.|+|+++++        +||+++|||++..+...++..+..++++.+....               +..+
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  102 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSL--------DFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATL  102 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEE
T ss_pred             ceeEEEEEEEEeCCHHHHH--------HHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceE
Confidence            3478999999999999999        9999999999988777677778889988653211               2467


Q ss_pred             EEEecCCCC-----CCcC----CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          176 ELTYNYGVD-----KYDI----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       176 el~~~~~~~-----~~~~----g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +|....+..     .+..    ..|+.|++|.|+|+++++++|+++|+++..+|.....+  .++|++|||||.|||++.
T Consensus       103 ~l~~~~~~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel~~~  180 (187)
T 3vw9_A          103 ELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNP  180 (187)
T ss_dssp             EEEEETTGGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST--TCEEEECTTCCEEEEECG
T ss_pred             EEEEecCCCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcc--eEEEEECCCCCEEEEEEc
Confidence            776543211     1222    24889999999999999999999999999887654432  367899999999999997


Q ss_pred             CC
Q 016689          247 GP  248 (384)
Q Consensus       247 ~~  248 (384)
                      ..
T Consensus       181 ~~  182 (187)
T 3vw9_A          181 NK  182 (187)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.77  E-value=8.2e-19  Score=150.26  Aligned_cols=124  Identities=15%  Similarity=0.104  Sum_probs=90.7

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--cc---cCCCceeE
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EY---DKGNGYAQ  324 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~~---~~g~g~~h  324 (384)
                      .-+|.|+.|.|+|+++|++||+++|||++..+...++  ..++.+..........+.+.......  +.   ..+.+..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            3479999999999999999999999999876543333  33444433222223333333221111  11   12357789


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ++|.|+|+++++++|+++|+++..+|...++  ++.+||+|||||.|||+|-.
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999999998887777  58899999999999999854

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.77  E-value=7.7e-18  Score=138.88  Aligned_cols=125  Identities=18%  Similarity=0.251  Sum_probs=94.8

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcC
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI  188 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~  188 (384)
                      .+|..+++|+.|.|+|+++++        +||+++|||++......+++ ...+.+..+  .....+.+...........
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~--~~~~~l~l~~~~~~~~~~~   76 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKAL--------DFYVNTLGFEKVFDNQLDPN-MRFVTVVPP--GAQTQVALGLPSWYEDGRK   76 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEEETT-EEEEEEECT--TCSCEEEEECGGGCSSCCC
T ss_pred             cccccceeEEEEEECCHHHHH--------HHHHhCcCCcEeeecccCCC-ceEEEEECC--CCceEEEEecCcccccccC
Confidence            456789999999999999999        99999999999876543222 234444432  2344566655432112223


Q ss_pred             CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       189 g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ..+..|++|.|+|+++++++|+++|+++..+|...+.|. +.++++|||||.|||+|
T Consensus        77 ~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           77 PGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEE
T ss_pred             CCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEe
Confidence            357889999999999999999999999988877766544 78899999999999987

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.77  E-value=7.7e-18  Score=156.26  Aligned_cols=146  Identities=16%  Similarity=0.253  Sum_probs=113.1

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      ...+++||.|.|+|+++++        +||+++|||++..+..      ..+++..+.    ..+.+.....     .+.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~--------~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~   79 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRML--------AFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTK   79 (252)
T ss_dssp             --CCEEEEEEEESCHHHHH--------HHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCC
T ss_pred             cCceEEEEEEEeCCHHHHH--------HHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCC
Confidence            3468999999999999999        9999999999876532      246666642    3555554321     234


Q ss_pred             CceEEEEEEC--CHHHHHHHHHHcCCeeeeC-Ccc---ccCCCEEEEEEECCCCCEEEEeecCCC------------CCC
Q 016689          191 GFGHFGIAVE--DVAKTVDLVKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEP  252 (384)
Q Consensus       191 g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~-p~~---~~~g~~~~~~~~DPdG~~iel~~~~~~------------~~~  252 (384)
                      +..|++|.|+  |+++++++|+++ +++..+ +..   ...++.+.+||+|||||.|||++....            +.+
T Consensus        80 ~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~g  158 (252)
T 3pkv_A           80 PFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLS  158 (252)
T ss_dssp             CCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCE
T ss_pred             CeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcE
Confidence            6889999986  599999999999 988652 221   123567889999999999999997542            236


Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeee
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRK  281 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~  281 (384)
                      +.||.|.|+|++++.+|| ++|||+...+
T Consensus       159 lghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          159 IGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             eeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            999999999999999999 9999998754

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.76  E-value=6e-18  Score=163.59  Aligned_cols=182  Identities=9%  Similarity=0.091  Sum_probs=129.5

Q ss_pred             cchhhhhhhcccccccccc----------------------cchhhhhhcccCCceeeccCCCcccCcc-----cC-Ccc
Q 016689           51 SRRLALFQLGAAIPQSHFF----------------------GAKALKLLRAEGSTIEASTSGNMAPTSN-----TV-TEQ  102 (384)
Q Consensus        51 ~~~~~~~~~~~~~p~~~~~----------------------g~~~~~l~~~~g~~~~~~~~~~~~~~~~-----~~-~~~  102 (384)
                      ..+-++.|+++.+++.+++                      ++..+++.||+|+.+|++.+........     .. .++
T Consensus        63 ~~~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~  142 (339)
T 3lm4_A           63 APEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPS  142 (339)
T ss_dssp             CSSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSS
T ss_pred             CCCCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCccc
Confidence            3345677777777764443                      3458899999999999987544322100     00 011


Q ss_pred             hhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC
Q 016689          103 NVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG  182 (384)
Q Consensus       103 ~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~  182 (384)
                      . .....+...+++|+.|.|+|+++++        +||+++|||++..... +++....+|+..+..  ++.+.+.....
T Consensus       143 ~-~~~~g~~~~~l~Hv~l~v~D~~~a~--------~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~  210 (339)
T 3lm4_A          143 K-KPLQGIPVKRIDHLNLMSSDVTAVK--------DSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT  210 (339)
T ss_dssp             C-CCSBSSCCCEEEEEEEEESCHHHHH--------HHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT
T ss_pred             c-cCCCCCCcceeeeEEEEcCCHHHHH--------HHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC
Confidence            1 0111225679999999999999999        9999999999987654 344445678876532  34566654211


Q ss_pred             CCCCcCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          183 VDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       183 ~~~~~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                          ....++.|++|.|+|   +++++++|+++|+++..+|.....+..+++|++|||||+||++....
T Consensus       211 ----~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          211 ----GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             ----SCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             ----CCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence                123479999999999   88899999999999988887666566788999999999999986543

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.75  E-value=9.4e-18  Score=137.39  Aligned_cols=120  Identities=18%  Similarity=0.313  Sum_probs=94.7

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC--CCCcCCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKYDIGT  190 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~~~g~  190 (384)
                      ++++|+.|.|+|+++++        +||+++|||++......++..+..+|+..+.   +..+++......  .+...+.
T Consensus         2 m~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~   70 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMK--------QFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENL   70 (127)
T ss_dssp             CCCCEEEEECSSHHHHH--------HHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCS
T ss_pred             CEEEEEEEEECCHHHHH--------HHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCC
Confidence            58999999999999999        9999999999976644444456777887642   356777654432  2222456


Q ss_pred             CceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          191 GFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       191 g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |+.|++|.|+|   +++++++|+++|+++..+|..... +.+.+|++|||||+|||+
T Consensus        71 g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           71 GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             ceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            88999999999   889999999999999887765543 456788999999999996

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.75  E-value=1.8e-17  Score=135.18  Aligned_cols=123  Identities=24%  Similarity=0.353  Sum_probs=90.2

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC---CCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKY  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~  186 (384)
                      ||..+++|+.|.|+|+++++        +||+++|||++......++.....+++..+.   . .+++......   +..
T Consensus         1 M~~~~i~hi~l~v~d~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~-~l~l~~~~~~~~~~~~   68 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATK--------NFYVEKLGFEVLRENHRPEKNDIKLDLKLGS---Q-ELEIFISDQFPARPSY   68 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHH--------HHHTTTTCCEEEEEEEEGGGTEEEEEEEETT---E-EEEEEECTTCCCCCCS
T ss_pred             CcccccceEEEEeCCHHHHH--------HHHHHhcCCEEEeeccCCCCcceEEEEecCC---e-EEEEEeccCCCCCCCC
Confidence            45678999999999999999        9999999999876533222222234455542   2 5666643221   112


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          187 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       187 ~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ..+.|..|++|.|+|+++++++|+++|+++...|.... ++.+.+|++|||||.|||+|
T Consensus        69 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           69 PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDF-TGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTT-TCCEEEEEECTTCCEEEEEC
T ss_pred             CCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCC-CCcEEEEEECCCCCEEEeeC
Confidence            23468889999999999999999999999876654333 34578899999999999985

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.75  E-value=1.7e-17  Score=146.00  Aligned_cols=129  Identities=29%  Similarity=0.500  Sum_probs=100.9

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCc---------------ceEEEEeccCCCc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK---------------NAVLELTYNHGVT-  314 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~lel~~~~~~~-  314 (384)
                      .+++||.|.|.|++++++||+++|||++..+...++..+.++++..+....               ...+++....+.. 
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  112 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  112 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCC
Confidence            479999999999999999999999999988766666678888887543211               3567775433221 


Q ss_pred             ----cccC----CCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcccc
Q 016689          315 ----EYDK----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  381 (384)
Q Consensus       315 ----~~~~----g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~  381 (384)
                          .+..    ..++.|++|.|+|+++++++++++|+++..+|...++  ++++||+|||||.|||++.....+
T Consensus       113 ~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  185 (187)
T 3vw9_A          113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  185 (187)
T ss_dssp             CTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSGG
T ss_pred             CCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccccc
Confidence                1111    2388999999999999999999999999988766555  357899999999999999876543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.75  E-value=4.9e-17  Score=154.72  Aligned_cols=180  Identities=14%  Similarity=0.151  Sum_probs=125.0

Q ss_pred             hhhhhhhcccccccccc------------------------cchhhhhhcccCCceeeccCCCcccCc-ccCCcchhh-c
Q 016689           53 RLALFQLGAAIPQSHFF------------------------GAKALKLLRAEGSTIEASTSGNMAPTS-NTVTEQNVL-D  106 (384)
Q Consensus        53 ~~~~~~~~~~~p~~~~~------------------------g~~~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~-~  106 (384)
                      .-++.|+++.+++..++                        ++.++++.||+|+.+|++......... -..+|.... .
T Consensus        63 ~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~  142 (309)
T 3hpy_A           63 TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQ  142 (309)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGG
T ss_pred             CCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccc
Confidence            34677777777654443                        334788999999999999754332110 001111100 0


Q ss_pred             cc-ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-CceEEEEEeeCCCCccEEEEEEecCCCC
Q 016689          107 WV-KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVD  184 (384)
Q Consensus       107 ~~-~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~  184 (384)
                      .. .....+|+||.|.|+|+++++        +||+++|||++......+. +.....|+..+..  ++.+.+....   
T Consensus       143 ~~~~~~~~~i~Hv~l~v~D~~~~~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---  209 (309)
T 3hpy_A          143 REHGIAPIQLDHCLLYGPNIAEVQ--------KIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEYP---  209 (309)
T ss_dssp             GGSSSCCSEEEEEEEEESCHHHHH--------HHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEECS---
T ss_pred             cCCCcccceeeeEEEEeCCHHHHH--------HHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecCC---
Confidence            11 245679999999999999999        9999999999876654333 3345677776432  3344443321   


Q ss_pred             CCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          185 KYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                         ...++.|++|.|+|+++   ++++|+++|+++..+|.....+..+++|++|||||+|||.....
T Consensus       210 ---~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~  273 (309)
T 3hpy_A          210 ---EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGY  273 (309)
T ss_dssp             ---STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECC
T ss_pred             ---CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCc
Confidence               13469999999998665   67899999999988887766667789999999999999998743

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.75  E-value=2e-17  Score=157.05  Aligned_cols=185  Identities=17%  Similarity=0.216  Sum_probs=122.1

Q ss_pred             chhhhhhcccCCceeeccCCCcccC--cccCCcchhh-cccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCE
Q 016689           71 AKALKLLRAEGSTIEASTSGNMAPT--SNTVTEQNVL-DWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMK  147 (384)
Q Consensus        71 ~~~~~l~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~  147 (384)
                      +..+++.||+|+.+++.........  ...+++.... ....+...+++|+.|.|+|+++++        +||+++|||+
T Consensus       104 ~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~--------~FY~~~LG~~  175 (307)
T 1mpy_A          104 GRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATY--------DLFTKVLGFY  175 (307)
T ss_dssp             CCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEEEEESCHHHHH--------HHHHHTTCCE
T ss_pred             eEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEEEEcCCHHHHH--------HHHHHHcCCe
Confidence            4577889999999999864332211  0011111100 011245679999999999999999        9999999999


Q ss_pred             EEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC-ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccc
Q 016689          148 LLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPV  223 (384)
Q Consensus       148 ~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~  223 (384)
                      +........+....+|+..+..  ++.+++...       ...| ..|++|.|+   |+++++++|+++|+++..+|...
T Consensus       176 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-------~~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~  246 (307)
T 1mpy_A          176 LAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH-------PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRH  246 (307)
T ss_dssp             EEEEEECTTCCEEEEEEESSSB--SCSEEEEEC-------SSSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred             eEeeeecCCCcEEEEEEEcCCC--ceeEEEecC-------CCCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccC
Confidence            8765432222122346655322  223444322       1234 789999999   56777899999999988777665


Q ss_pred             cCCCEEEEEEECCCCCEEEEeecCCCCC-CceeeeeecCChHHHHHHHHH
Q 016689          224 KGGNTVIAFIEDPDGYKFELLERGPTPE-PLCQVMLRVGDLDRAINFYKK  272 (384)
Q Consensus       224 ~~g~~~~~~~~DPdG~~iel~~~~~~~~-~~~hV~L~V~Dle~s~~FY~~  272 (384)
                      ..+.++.+|++|||||+|||.+...... ...-+.....++.+.+.||..
T Consensus       247 ~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          247 GLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             SSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             CCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence            4444668899999999999999753211 122234467788888888854

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.75  E-value=2e-17  Score=137.88  Aligned_cols=124  Identities=23%  Similarity=0.284  Sum_probs=93.0

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC--CCC-
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKY-  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~-  186 (384)
                      |+..++.|+.|.|+|+++++        +||+++|||++......++..+..+++. +    ...++|......  ... 
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~   67 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISC--------RWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFD   67 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCC
T ss_pred             CCCCcccEEEEEeCCHHHHH--------HHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCC
Confidence            35678999999999999999        9999999999976654333345556655 2    346777654322  111 


Q ss_pred             cCCCCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          187 DIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       187 ~~g~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      ..+.|..|++|.|   +|+++++++|+++|+++.. +...+.  ++.+|++|||||+|||++..+.
T Consensus        68 ~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~--g~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           68 ETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPF--GWILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             TTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETT--EEEEEEECTTCCEEEEEEECTT
T ss_pred             CCCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCC--ceEEEEECCCCCEEEEEEcCCC
Confidence            2346889999999   8899999999999999874 444332  3788999999999999997653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.74  E-value=1.7e-17  Score=142.93  Aligned_cols=126  Identities=25%  Similarity=0.438  Sum_probs=98.0

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC-----
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-----  185 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-----  185 (384)
                      +..+++||+|.|+|+++|+        +||+++|||++......++.....+++..+    ...++|........     
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~   72 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVL--------PFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKF   72 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHH--------HHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHH
T ss_pred             ccCcCCEEEEEECCHHHHH--------HHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHH
Confidence            4578999999999999999        999999999998765555555677888765    34677765433221     


Q ss_pred             -CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeC-CccccCCCEEEEEE--ECCCCCEEEEeecCCC
Q 016689          186 -YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLERGPT  249 (384)
Q Consensus       186 -~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~-p~~~~~g~~~~~~~--~DPdG~~iel~~~~~~  249 (384)
                       ...+.|+.|++|.|+|+++++++|+++|+++..+ |.... ++.+.+|+  +|||||.|||++..+.
T Consensus        73 ~~~~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~-~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           73 IQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGA-RGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             HHHHCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECG-GGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             hhcCCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCC-CCcEEEEEeccCCCeEEEEEEecCCc
Confidence             1235789999999999999999999999999776 44333 34556777  4999999999998764

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.73  E-value=7e-17  Score=135.18  Aligned_cols=128  Identities=20%  Similarity=0.321  Sum_probs=94.2

Q ss_pred             cccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC
Q 016689          106 DWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK  185 (384)
Q Consensus       106 ~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~  185 (384)
                      .|.+ |...+.||.|.|+|+++++        +||+++|||++..+... ++.+..++++.+  ..++.+++....+...
T Consensus         4 ~~~~-m~~~~~~i~l~v~Dl~~s~--------~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~l~~~~~~~~   71 (139)
T 1twu_A            4 RFSS-FQAAQIRIARPTGQLDEII--------RFYEEGLCLKRIGEFSQ-HNGYDGVMFGLP--HADYHLEFTQYEGGST   71 (139)
T ss_dssp             BCSS-CBCSCEEEEEECSCHHHHH--------HHHTTTSCCCEEEEEEE-ETTEEEEEEESS--SSSEEEEEEEETTCCC
T ss_pred             cCCC-CCcceeEEeeEeCCHHHHH--------HHHHhcCCcEEEEeccC-CCCeeEEEEecC--CCceEEEEeecCCCCC
Confidence            3665 6677899999999999999        99999999998765432 234567788754  2244577765443333


Q ss_pred             CcCCCCceEEEEEECCH---HHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          186 YDIGTGFGHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~Dv---~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ...+.++.|++|.|+|+   ++++++|+++|+++...+.+.....+ . |++|||||.|||+++.
T Consensus        72 ~~~~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g-~-~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           72 APVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG-V-TIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE-E-EEECTTCCEEEEESSC
T ss_pred             CCCCCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC-e-EEECCCCCEEEEEEcC
Confidence            34456889999999999   99999999999998832211111122 2 6999999999999874

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.73  E-value=4.1e-17  Score=137.17  Aligned_cols=129  Identities=19%  Similarity=0.319  Sum_probs=96.1

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCC--CccEEEEEEecCCCCCC-
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE--DSHFVVELTYNYGVDKY-  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~lel~~~~~~~~~-  186 (384)
                      .|..+++|+.|.|+|+++++        +||+++|||++......++.....+++..+..  ..+..++|......... 
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~   76 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEAS--------KYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTV   76 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHH
T ss_pred             CccceeeEEEEEeCCHHHHH--------HHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChH
Confidence            35679999999999999999        99999999999776544444556777776532  11246777654332111 


Q ss_pred             -----cCC--CCceEEEEEECCHHHHHHHHHHcCCeee-eCCccccCCCEEEEEE--ECCCCCEEEEeecC
Q 016689          187 -----DIG--TGFGHFGIAVEDVAKTVDLVKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  247 (384)
Q Consensus       187 -----~~g--~g~~hi~~~v~Dv~~~~~~l~~~G~~~~-~~p~~~~~g~~~~~~~--~DPdG~~iel~~~~  247 (384)
                           ..+  .|+.|++|.|+|+++++++|+++|+++. ..|.... ++.+.+|+  +|||||.|||++..
T Consensus        77 ~~~~~~~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~-~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           77 AKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGT-GGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             HHHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECS-SSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             HHHHHhCCCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCC-CceEEEEEeecCCCcEEEEEEecC
Confidence                 233  6889999999999999999999999988 3454322 34456667  99999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.73  E-value=5.4e-17  Score=155.68  Aligned_cols=155  Identities=17%  Similarity=0.191  Sum_probs=112.9

Q ss_pred             chhhhhhcccCCceeeccCCCcccCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           71 AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        71 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      +..+++.||+|+.++++........    .++...........+|+|+.|.|+|+++++        +|| ++|||++..
T Consensus       113 g~~~~~~DP~G~~iel~~~~~~~~~----~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~--------~FY-~~LGf~~~~  179 (323)
T 1f1u_A          113 GDSVRVEDPLGFPYEFFYETEHVER----LTQRYDLYSAGELVRLDHFNQVTPDVPRGR--------AYL-EDLGFRVSE  179 (323)
T ss_dssp             CSEEEEECTTSCEEEEECCBCCCCC----CTTCGGGCCTTCCCEEEEEEEEESCHHHHH--------HHH-HHTTCEEEE
T ss_pred             ceEEEEECCCCCEEEEEEecccccc----cccccccCCCCCCceeeeEEEecCCHHHHH--------HHH-HhCCCeEEE
Confidence            3467889999999999864332210    111111011234679999999999999999        999 999999977


Q ss_pred             eeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCC--eeeeCCccccC
Q 016689          151 KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGG--KVTREPGPVKG  225 (384)
Q Consensus       151 ~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~--~~~~~p~~~~~  225 (384)
                      ....+.+.....|+..++  .++.+++...       .+.++.|++|.|+|+++   ++++|+++|+  ++..+|..+..
T Consensus       180 ~~~~~~g~~~~~f~~~~~--~~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~  250 (323)
T 1f1u_A          180 DIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGV  250 (323)
T ss_dssp             EEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECST
T ss_pred             EEEcCCCcEEEEEEEcCC--CcccEEEeCC-------CCCCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCC
Confidence            655444444567777543  2344555432       12388999999999888   9999999999  88877766665


Q ss_pred             CCEEEEEEECCCCCEEEEeecC
Q 016689          226 GNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       226 g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +...++|++|||||+||+....
T Consensus       251 ~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          251 SNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             TCCEEEEEECTTCCEEEEEECC
T ss_pred             CCcEEEEEECCCCCEEEEEeCC
Confidence            6777899999999999998754

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.73  E-value=6e-17  Score=133.13  Aligned_cols=120  Identities=21%  Similarity=0.300  Sum_probs=91.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEecc-------CCCc---ccc-CC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-------HGVT---EYD-KG  319 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~-------~~~~---~~~-~g  319 (384)
                      .+++||.|.|+|++++++||+++|||++..+...++......++..+    ...+++..+       ....   ... .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            46899999999999999999999999998765544444445555543    346666551       1111   112 45


Q ss_pred             CceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          320 NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       320 ~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      .+..|++|.|+|+++++++++++|+++..+|...+++ .+.+||+|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence            6889999999999999999999999988766554443 488999999999999986

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.73  E-value=8.6e-17  Score=132.52  Aligned_cols=120  Identities=22%  Similarity=0.351  Sum_probs=91.3

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---CCCCc
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYD  187 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~  187 (384)
                      +..+++|+.|.|+|+++++        +||+++|||++....    .  ..+++..+    ...+++.....   +....
T Consensus         7 ~~~~i~hi~l~v~D~~~a~--------~FY~~~lG~~~~~~~----~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~   68 (133)
T 3ey7_A            7 KISHLDHLVLTVADIPTTT--------NFYEKVLGMKAVSFG----A--GRIALEFG----HQKINLHQLGNEFEPKAQN   68 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHH--------HHHHHHHCCEEEEET----T--TEEEEEET----TEEEEEEETTSCCSSCCTT
T ss_pred             EecccCEEEEEECCHHHHH--------HHHHHccCceEEEec----C--CeEEEEcC----CEEEEEEcCCCCccccCCC
Confidence            3568999999999999999        999999999997652    1  14555554    23555554322   11223


Q ss_pred             CCCCceEEEEEECC-HHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecCC
Q 016689          188 IGTGFGHFGIAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       188 ~g~g~~hi~~~v~D-v~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .+.+..|++|.|+| +++++++|+++|+++..+|....+  +..+.+|++|||||.|||++..+
T Consensus        69 ~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           69 VRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             CCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             CCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            45688999999997 999999999999999877655443  23478999999999999999753

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.73  E-value=5.3e-17  Score=132.87  Aligned_cols=119  Identities=24%  Similarity=0.305  Sum_probs=92.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc--ccCCCceeEEEEEc
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE--YDKGNGYAQIAIGT  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~--~~~g~g~~hiaf~V  329 (384)
                      +++||.|.|+|++++++||+++|||++..+...++.++..+++..+.   +..+++........  ...+.+..|++|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIST   79 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEEC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEEc
Confidence            68999999999999999999999999976644334445666665432   45666665432221  22456789999999


Q ss_pred             CC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          330 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       330 dD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      +|   +++++++++++|+++..+|...+.+ .+.+||+|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            99   8899999999999998877665554 37899999999999997

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.72  E-value=4.7e-17  Score=133.77  Aligned_cols=121  Identities=21%  Similarity=0.276  Sum_probs=89.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc-------cCCCceeE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY-------DKGNGYAQ  324 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~-------~~g~g~~h  324 (384)
                      +++|+.|.|+|++++++||+++|||++..+...++.+....++..+    ...+++....+....       ....+..|
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~h   80 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMHH   80 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCceE
Confidence            6899999999999999999999999998655444444566666654    345555543222111       23568899


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEE--ECCCCCeEEEEec
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWKSVFVDN  376 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iElve~  376 (384)
                      ++|.|+|+++++++++++|+++..++........+.+++  +|||||.|||+|.
T Consensus        81 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           81 ICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999999999999999877654333222356666  8999999999973

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.72  E-value=1.8e-16  Score=133.93  Aligned_cols=126  Identities=21%  Similarity=0.231  Sum_probs=94.6

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeC-----------CCCceEEEEEeeCCCCccEEEEEEe
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI-----------PEDRYTNAFLGYGPEDSHFVVELTY  179 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~lel~~  179 (384)
                      +.+++.|+.|.|+|+++++        +||++ |||++......           ++.....+++..+.  .+..++|..
T Consensus         8 ~~~~i~hv~l~v~D~~~a~--------~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~   76 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAI--------SFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSR   76 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHH--------HHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHH--------HHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEE
Confidence            4568999999999999999        99999 99998765432           12334567777542  234566654


Q ss_pred             c--CCCC-----CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          180 N--YGVD-----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       180 ~--~~~~-----~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .  ....     ....+.|+.|++|.|+|+++++++|+++|+++..+|...+ ++.+.+|++|||||.|||++...
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           77 FLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             EEESCCCCBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEECC
T ss_pred             ecCCCCcccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEeccC
Confidence            2  1111     1223457889999999999999999999999988776554 45678899999999999998753

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.72  E-value=2.7e-17  Score=136.20  Aligned_cols=120  Identities=17%  Similarity=0.148  Sum_probs=90.5

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeee-cCCCCcEEEEEeecCCCCcceEEEEeccCCCccc-----cCCCceeE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR-DNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY-----DKGNGYAQ  324 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~-----~~g~g~~h  324 (384)
                      .+++||.|.|+|+++|++||+ +|||++..+. ..+..+..+.++..+    ...+++..+......     ..+.++.|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            479999999999999999999 9999986542 223344556666543    456777654322111     12578889


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccC--CCCCceEEEEECCCCCeEEEEec
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      ++|.|+|+++++++|+++|+++..+|.+.  .++ .+++|++|||||.|||+|+
T Consensus        81 iaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g-~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDN-RKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTT-EEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCCeecccCCC-ceEEEEECCCceEEEEecC
Confidence            99999999999999999999988765432  232 4789999999999999984

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.72  E-value=1.1e-16  Score=134.89  Aligned_cols=122  Identities=41%  Similarity=0.718  Sum_probs=92.5

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++|+.|.|.|++++++||+++|||++..+...+++.+.+.++..+.......+++...........+.+..|++|.|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~   86 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   86 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeC
Confidence            46899999999999999999999999997655433344555666654322246677765443223334568899999999


Q ss_pred             CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+++++++++++|+++..+     ++...++||+|||||.|||++..
T Consensus        87 d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           87 DVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             CHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             CHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999998765     22224459999999999999865

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.72  E-value=1.3e-16  Score=131.49  Aligned_cols=122  Identities=20%  Similarity=0.271  Sum_probs=92.9

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++||.|.|.|++++++||+++|||++..+...++ ...++.+..+.  ....+.+.............+..|++|.|+
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   88 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLITR   88 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEES
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEeC
Confidence            579999999999999999999999999986543222 23444444322  245566655331111223357789999999


Q ss_pred             CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |+++++++++++|+++..+|...+++. +.+||+|||||.|||+|.
T Consensus        89 d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           89 DIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             CHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             CHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999998888777753 899999999999999974

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.72  E-value=1.1e-16  Score=135.89  Aligned_cols=122  Identities=22%  Similarity=0.305  Sum_probs=90.5

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---CCCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKY  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~  186 (384)
                      ++..+++||.|.|+|+++++        +||+++|||++....   + .  .+++..+    ...+++.....   +...
T Consensus        19 m~i~~l~hv~l~v~D~~~a~--------~FY~~vLG~~~~~~~---~-~--~~~l~~~----~~~l~l~~~~~~~~~~~~   80 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTI--------RFYEEVLGFSAVTFK---Q-N--RKALIFG----AQKINLHQQEMEFEPKAS   80 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEET---T-T--EEEEEET----TEEEEEEETTBCCSSCCS
T ss_pred             cccceeeEEEEEeCCHHHHH--------HHHHhcCCCEEEEcc---C-C--eEEEEeC----CeEEEEeccCCcCCCcCc
Confidence            44578999999999999999        999999999997652   1 2  4555554    23555554322   1122


Q ss_pred             cCCCCceEEEEEEC-CHHHHHHHHHHcCCeeeeCCccccCC--CEEEEEEECCCCCEEEEeecCCC
Q 016689          187 DIGTGFGHFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       187 ~~g~g~~hi~~~v~-Dv~~~~~~l~~~G~~~~~~p~~~~~g--~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      ....|..|++|.+. |+++++++|+++|+++..+|....++  ..+.+|++|||||+|||.+..+.
T Consensus        81 ~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           81 RPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             SCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             CCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            34568899999987 99999999999999998777554433  34788999999999999998764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.71  E-value=3.2e-17  Score=140.46  Aligned_cols=122  Identities=24%  Similarity=0.322  Sum_probs=94.8

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC--------------CCceEEEEEeeCCCCccEEE
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVV  175 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~l  175 (384)
                      .+.++++||+|.|+|+++++        +||+++|||++..+...+              +.....+++..+    ...+
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~l   82 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESL--------QNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQL   82 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHH--------HHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEE
T ss_pred             cccccccEEEEEeCCHHHHH--------HHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEE
Confidence            34578999999999999999        999999999976543332              234567777765    3567


Q ss_pred             EEEecCCCCC-C-----cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCC--CCEEEEeec
Q 016689          176 ELTYNYGVDK-Y-----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  246 (384)
Q Consensus       176 el~~~~~~~~-~-----~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPd--G~~iel~~~  246 (384)
                      +|......+. +     ..+.|+.|++|.|+|+++++++|+++|+++..++. .  ++.+++|+.|||  |+.|||+|+
T Consensus        83 eL~~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           83 ELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F--EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             EEEEECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E--TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             EEEEECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c--CCeeEEEEeccccCcEEEEEEec
Confidence            7766433221 1     13678999999999999999999999999976542 2  246899999999  999999986

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.71  E-value=2.2e-16  Score=138.68  Aligned_cols=130  Identities=35%  Similarity=0.601  Sum_probs=97.0

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCC---------------CccEEE
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVV  175 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~l  175 (384)
                      ..+++.|+.|.|+|+++++        +||+++|||++......++..+..++++.+..               ..+..+
T Consensus        28 ~~~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   99 (184)
T 2za0_A           28 KDFLLQQTMLRIKDPKKSL--------DFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATL   99 (184)
T ss_dssp             TTCEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEE
T ss_pred             cceeEEEEEEEeCCHHHHH--------HHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceE
Confidence            3568999999999999999        99999999999876544444566777765320               023567


Q ss_pred             EEEecCCC---C--CCc----CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          176 ELTYNYGV---D--KYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       176 el~~~~~~---~--~~~----~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +|......   +  .+.    ...|+.|++|.|+|+++++++|+++|+++..+|....+  .+.+||+|||||.|||++.
T Consensus       100 ~L~~~~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~  177 (184)
T 2za0_A          100 ELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNP  177 (184)
T ss_dssp             EEEEETTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECT
T ss_pred             EEEecCCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEec
Confidence            77653221   1  111    12578999999999999999999999999887765332  3467899999999999997


Q ss_pred             CCCC
Q 016689          247 GPTP  250 (384)
Q Consensus       247 ~~~~  250 (384)
                      ...|
T Consensus       178 ~~~~  181 (184)
T 2za0_A          178 NKIA  181 (184)
T ss_dssp             TTGG
T ss_pred             Cccc
Confidence            6544

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.71  E-value=2.1e-16  Score=133.04  Aligned_cols=115  Identities=24%  Similarity=0.306  Sum_probs=88.1

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      ++..++.||.|.|+|+++++        +||+++|||++.....  +..  .+++..+.  .+..+++....      ..
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~~--~~~--~~~~~~~~--~~~~l~l~~~~------~~   83 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSS--------QFYTEILGFEAGLLDS--ARR--WNFLWVSG--RAGMVVLQEEK------EN   83 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHH--------HHHHHTSCCEEEEEET--TTT--EEEEEETT--TTEEEEEEECC------SS
T ss_pred             eeeceecEEEEEeCCHHHHH--------HHHHHhcCCEEEEecC--CCc--EEEEEecC--CCcEEEEeccC------CC
Confidence            45678999999999999999        9999999999976642  222  44555443  24567776541      22


Q ss_pred             CCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          190 TGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       190 ~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      .+..|++|.|+  |+++++++|+++|+++. +|.....+..+.+||+|||||.|||++
T Consensus        84 ~~~~h~~~~v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           84 WQQQHFSFRVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCCCEEEEEECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             CCCceEEEEEeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            46789999998  99999999999999988 343444456788999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.71  E-value=9.6e-17  Score=135.94  Aligned_cols=126  Identities=17%  Similarity=0.221  Sum_probs=92.7

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC------CceEEEEEeeCCCCccEEEEEEecCCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGV  183 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~------~~~~~~~l~~g~~~~~~~lel~~~~~~  183 (384)
                      ++..+|+||.|.|+|+++++        +||+++|||++......++      ..-..+++..++   +..+++......
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~   83 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASR--------YFYGTILGLHELTDDEVPATLTELVASGKVANFITPD---GTILDLFGEPEL   83 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHH--------HHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT---SCEEEEEECTTC
T ss_pred             cccceEeEEEEEeCCHHHHH--------HHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC---CCEEEEEecCCC
Confidence            45679999999999999999        9999999999875322111      001245666532   245666654331


Q ss_pred             C-----CCcCCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          184 D-----KYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       184 ~-----~~~~g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .     ......+..|++|.|+  |+++++++|+++|+++..+|.....  ++.+|++|||||.|||++...
T Consensus        84 ~~~~~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           84 SPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCSSSSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CcCCCCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            1     1223468999999999  9999999999999999877766543  348899999999999998754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.70  E-value=2e-16  Score=129.81  Aligned_cols=118  Identities=16%  Similarity=0.228  Sum_probs=88.5

Q ss_pred             cccceeeEEEEEe--CCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          110 SDKRRMLHVVYRV--GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       110 ~~~~~i~Hv~l~V--~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      +|..+++|+.|.|  +|+++++        +||+++|||++..+...... ...+|+..+    ...+++......    
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~--------~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~----~~~l~l~~~~~~----   68 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEAR--------AFYGETIGMEEIPKPEELKK-RGGCWFKCG----NQEIHIGVEQNF----   68 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHH--------HHHTTTTCCEEECCCGGGGG-GCCEEEEET----TEEEEEEECTTC----
T ss_pred             cccceeeeEEEEcccccHHHHH--------HHHHhcCCCEEecCcccccC-CCceEEEeC----CEEEEEEecCCC----
Confidence            4567899999999  8999999        99999999998754321100 112456554    235566543221    


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ...+..|++|.|+|+++++++|+++|+++..++. .  .+.+.+|++|||||.|||+++.
T Consensus        69 ~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           69 NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHA-R--PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECS-S--TTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCC-C--CCeeEEEEECCCCCEEEEEeCC
Confidence            1247789999999999999999999999887663 2  2467889999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.69  E-value=1e-16  Score=138.05  Aligned_cols=123  Identities=20%  Similarity=0.330  Sum_probs=93.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-c-----cCCCceeE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-Y-----DKGNGYAQ  324 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~-----~~g~g~~h  324 (384)
                      .+++||.|.|.|+++|++||+++|||++..+...++.+..+.++..+    ...+++........ .     ..+.|+.|
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~H   82 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIHH   82 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeEE
Confidence            57999999999999999999999999998765444445666667653    35666665432211 1     23578999


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecC-CccCCCCCceEEEE--ECCCCCeEEEEecCc
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVDNLD  378 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iElve~~~  378 (384)
                      ++|.|+|+++++++|+++|+++..+ |...+++ .+++|+  +|||||.|||++..+
T Consensus        83 iaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           83 IAIGVKSIEERIQEVKENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEEECCHHHHHHHHHHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCC
Confidence            9999999999999999999998776 4433333 356677  499999999999764

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.69  E-value=1.5e-16  Score=129.72  Aligned_cols=119  Identities=18%  Similarity=0.299  Sum_probs=86.2

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC-CCcEEEEEeecCCCCcceEEEEeccCCCc---cccCCCceeEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPEDKNAVLELTYNHGVT---EYDKGNGYAQIA  326 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~lel~~~~~~~---~~~~g~g~~hia  326 (384)
                      .+++|+.|.|+|++++++||+++|||++......+ ...+.. ++..+    ...+++.......   ....+.+..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~----~~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKL-DLKLG----SQELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEE-EEEET----TEEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEE-EEecC----CeEEEEEeccCCCCCCCCCCCccceEEE
Confidence            46899999999999999999999999987543222 222322 23332    2256665432211   112345788999


Q ss_pred             EEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          327 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       327 f~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      |.|+|+++++++++++|+++..+|...+++ .+.+||+|||||.|||+|
T Consensus        79 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHHHHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            999999999999999999987665444443 478999999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.69  E-value=3.8e-16  Score=152.50  Aligned_cols=177  Identities=16%  Similarity=0.174  Sum_probs=129.3

Q ss_pred             cCcchhhhhhhcccccccccc------------------------cchhhhhhcccCCceeeccCCCcccCcccCCcchh
Q 016689           49 STSRRLALFQLGAAIPQSHFF------------------------GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNV  104 (384)
Q Consensus        49 ~~~~~~~~~~~~~~~p~~~~~------------------------g~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  104 (384)
                      .+..+-++.|+++.+++++++                        ++.++++.||+|+.+|.+.+......... . ...
T Consensus        67 ~~~~~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~-~-~~~  144 (365)
T 4ghg_A           67 TKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHM-R-YDL  144 (365)
T ss_dssp             EECSSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTT-C-TTT
T ss_pred             ccCCCCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccc-c-ccc
Confidence            445556888999888877665                        23478999999999999865432221110 0 001


Q ss_pred             hcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC
Q 016689          105 LDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD  184 (384)
Q Consensus       105 ~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~  184 (384)
                        .......+++||+|.|+|++++.        +||++ |||++......+++....+|+.+..  .++.+.+...    
T Consensus       145 --~~~~~~~rlgHV~L~v~D~~~t~--------~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~--~hH~la~~~~----  207 (365)
T 4ghg_A          145 --YSAGELVRLDHFNQVTPDVPRGR--------KYLED-LGFRVTEDIQDDEGTTYAAWMHRKG--TVHDTALTGG----  207 (365)
T ss_dssp             --CCTTCCCEEEEEEEEESCHHHHH--------HHHHH-TTCEEEEEEECTTSCEEEEEEESSS--SSCSEEEEES----
T ss_pred             --cccccCcceeEEEEeecCHHHHH--------HHHHh-cCCEEEEEEecCCCceeEEeeecCC--cccceeeecC----
Confidence              11224578999999999999999        99975 9999987766666666778888653  3445555432    


Q ss_pred             CCcCCCCceEEEEEECCHHH---HHHHHHHcCCe--eeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          185 KYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~--~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                         .+.+++|++|.|+|+++   +.++|+++|+.  +.+.|+.+..+...++||+||+|++||+....
T Consensus       208 ---~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          208 ---NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             ---SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ---CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence               23589999999998766   56889999985  55678877767888999999999999998764

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.69  E-value=4.3e-16  Score=150.48  Aligned_cols=171  Identities=13%  Similarity=0.084  Sum_probs=115.3

Q ss_pred             hhhhhhcccccccccc--------------------cchhhhhhcccCCceeeccCCCcccCcccCCcchhhcccccccc
Q 016689           54 LALFQLGAAIPQSHFF--------------------GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKR  113 (384)
Q Consensus        54 ~~~~~~~~~~p~~~~~--------------------g~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (384)
                      -++.|+|+.+|++ ++                    |..++++.||+||.+|.+........  +-....+ . ......
T Consensus        78 ~~~~hiaf~V~~~-dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~--~~~~~~v-~-~~~~i~  152 (335)
T 3oaj_A           78 GQVGVTSYVVPKG-AMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEAN--TWTFGEV-T-PDVAIK  152 (335)
T ss_dssp             SEEEEEEEEECTT-CHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECSCSCCC--CCCBTTB-C-TTTSCC
T ss_pred             CceEEEEEEecHH-HHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeCCCCcC--CCcCCCC-C-hhhhhc
Confidence            4578888888855 33                    45588999999999999975422110  0011111 1 123467


Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC-CCc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGF  192 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g-~g~  192 (384)
                      +|+||+|.|+|+++++        +||+++|||++..+..   +  ...| ..+..  +..+.+...........+ .++
T Consensus       153 gl~Hv~L~v~Dle~t~--------~FY~~vLG~~~~~~~~---~--~~~~-~~g~~--~~~l~l~~~~~~~~~~~g~g~~  216 (335)
T 3oaj_A          153 GFGGATLLSEQPDKTA--------DLLENIMGLERVGKEG---D--FVRY-RSAGD--IGNVIDLKLTPIGRGQMGAGTV  216 (335)
T ss_dssp             EEEEEEEECSSHHHHH--------HHHHHTSCCEEEEEET---T--EEEE-ECSSS--SSCEEEEESSCCCBCBCSBTEE
T ss_pred             cccceEEEECCHHHHH--------HHHHHHhCCEEeeccC---C--EEEE-EeCCC--CcEEEEEeCCCCCcCCCCCcce
Confidence            9999999999999999        9999999999986532   1  2233 32322  234555443222222223 368


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .|+||.|+|   ++++.++|+++|+.+.... ..  +....+||+||||++|||....|
T Consensus       217 ~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~-~r--~~~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          217 HHIAWRANDDEDQLDWQRYIASHGYGVTPVR-DR--NYFNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCE-EC--SSSEEEEEECTTSCEEEEEESCS
T ss_pred             EEEEEEcCCHHHHHHHHHHHHHCCCCccccc-cC--CcEEEEEEECCCCcEEEEEeCCC
Confidence            999999998   6668999999999865332 22  34467899999999999998754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.68  E-value=4.7e-16  Score=147.09  Aligned_cols=156  Identities=18%  Similarity=0.302  Sum_probs=108.8

Q ss_pred             hhhhhhcccCCceeeccC-CCcccCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           72 KALKLLRAEGSTIEASTS-GNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        72 ~~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      ...++.||+||.+++... ......  +.++. .-.+ .....+++|+.|.|+|+++++        +||+++|||++..
T Consensus       103 ~~~~~~DPdG~~iel~~~~~~~~~~--~~~~~-~~~~-~~~~~~l~hv~l~v~D~~~a~--------~FY~~~LG~~~~~  170 (300)
T 2zyq_A          103 EMIRFADPSGNCLEVFHGTALEHRR--VVSPY-GHRF-VTGEQGMGHVVLSTRDDAEAL--------HFYRDVLGFRLRD  170 (300)
T ss_dssp             EEEEEECTTCCEEEEEECCCCCCSC--CCCTT-CCCB-CCGGGCSCEEEEECSCHHHHH--------HHHHTTTCCEEEE
T ss_pred             EEEEEECCCCCEEEEEEcCCcCCCC--CccCC-Cccc-ccCCCccCeEEEEeCCHHHHH--------HHHHHhcCCEEee
Confidence            356799999999999865 322111  11111 0001 134568999999999999999        9999999999875


Q ss_pred             eeeCC--------CC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeee
Q 016689          151 KRDIP--------ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTR  218 (384)
Q Consensus       151 ~~~~~--------~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~  218 (384)
                      ....+        .+ .....|+..+.  .++.+++...  +    ...|+.|++|.|+|+++   ++++|+++|+++..
T Consensus       171 ~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~~~~~~~--~----~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~  242 (300)
T 2zyq_A          171 SMRLPPQMVGRPADGPPAWLRFFGCNP--RHHSLAFLPM--P----TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSA  242 (300)
T ss_dssp             EEEECGGGGTCCTTSCCEEEEEEESSS--BSCSEEEESS--C----CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             eecccccccccCCCCCceEEEEEEECC--CccEEEEecC--C----CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceee
Confidence            43222        12 23456766542  2334555432  1    23578999999999665   59999999999988


Q ss_pred             CCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          219 EPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       219 ~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +|.....+..+++|++|||||+|||++..
T Consensus       243 ~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          243 TLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             cccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            77666555677899999999999999854

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.68  E-value=7.1e-16  Score=135.47  Aligned_cols=127  Identities=29%  Similarity=0.517  Sum_probs=95.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCC---------------CcceEEEEeccCCCc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE---------------DKNAVLELTYNHGVT-  314 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~lel~~~~~~~-  314 (384)
                      .+++|+.|.|.|++++++||+++|||++..+...++..+.++++..+..               ..+..+++....+.. 
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~  109 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTED  109 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCC
Confidence            4799999999999999999999999999765543334466666654320               024567765432211 


Q ss_pred             ----ccc----CCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          315 ----EYD----KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       315 ----~~~----~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                          .+.    ...+..|++|.|+|+++++++++++|+++..+|...++  ++.+||+|||||.|||++...+
T Consensus       110 ~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          110 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             CTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence                111    12578899999999999999999999999888765444  4678999999999999998765

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.68  E-value=3.8e-16  Score=130.07  Aligned_cols=119  Identities=19%  Similarity=0.247  Sum_probs=90.0

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC--ccc-cCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TEY-DKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~--~~~-~~g~g~~hiaf~  328 (384)
                      ++.|+.|.|+|++++++||+++|||++..+....+..+..+++. +    ...+++......  ... ....+..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            57899999999999999999999999976654333334455554 2    456666554322  111 234678899999


Q ss_pred             c---CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          329 T---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       329 V---dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      |   +|+++++++|+++|+++. +|...+.  ++.+||+|||||.|||++..+
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   899999999999999976 4444444  488999999999999999764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.68  E-value=2.1e-16  Score=135.29  Aligned_cols=119  Identities=18%  Similarity=0.233  Sum_probs=92.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--------------CCcEEEEEeecCCCCcceEEEEeccCCCcc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--------------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE-  315 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-  315 (384)
                      .+++||.|.|.|++++++||+++|||++..+...+              +....+.++..+    ...+++........ 
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~~   93 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPST   93 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSCH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCCh
Confidence            47999999999999999999999999987554332              234566666654    45677766433221 


Q ss_pred             c-----cCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCC--CCeEEEEec
Q 016689          316 Y-----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD--GWKSVFVDN  376 (384)
Q Consensus       316 ~-----~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iElve~  376 (384)
                      .     ..+.|+.|++|.|+|+++++++|+++|+++..++. .++  .+++||+|||  |+.|||+|+
T Consensus        94 ~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           94 WREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             hHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cCC--eeEEEEeccccCcEEEEEEec
Confidence            1     13678999999999999999999999999876642 333  5899999999  999999986

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.67  E-value=5.6e-16  Score=147.80  Aligned_cols=149  Identities=17%  Similarity=0.316  Sum_probs=111.2

Q ss_pred             cchhhhhhcccCCceeeccCCCcccCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEE
Q 016689           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLL  149 (384)
Q Consensus        70 g~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~  149 (384)
                      |+..+++.||+|+.++++.........+. .+      ...+.++++|++|.|+|+++++        +||+++|||++.
T Consensus       104 ~~~~~~~~DPdG~~iel~~~~~~~~~~~~-~~------~~~~~~~l~hv~l~v~D~~~a~--------~FY~~~LG~~~~  168 (310)
T 3b59_A          104 GGYGFRFFSPDGLLFEVSSDVAKGAKRDL-AR------WEGVPVKISHIVLHSPNHQDMV--------KFFTDVLGFKVS  168 (310)
T ss_dssp             CCEEEEEECTTSCEEEEEECCCCCCCCCC-CT------TCCCCCEEEEEEEEETTHHHHH--------HHHHHTSCCEEE
T ss_pred             CceEEEEECCCCCEEEEEEcccccCCCcc-CC------CCCcCcEeceEEEecCCHHHHH--------HHHHhCCCCEEE
Confidence            45577899999999999864332211110 00      1235679999999999999999        999999999987


Q ss_pred             eeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHHH---HHHHHHcCCeeeeCCccccCC
Q 016689          150 RKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT---VDLVKAKGGKVTREPGPVKGG  226 (384)
Q Consensus       150 ~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~~---~~~l~~~G~~~~~~p~~~~~g  226 (384)
                      ....  +   ..+|+..+.  .++.+.+...       . .|+.|++|.|+|++++   +++|+++|+++...|..+..+
T Consensus       169 ~~~~--~---~~~fl~~~~--~~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~  233 (310)
T 3b59_A          169 DWLG--D---FMCFLRCNS--AHHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAG  233 (310)
T ss_dssp             EEET--T---TEEEEESSS--BSCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTT
T ss_pred             EeeC--C---eEEEEecCC--CcceEEEECC-------C-CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCC
Confidence            6431  1   356776542  2445555432       1 5789999999997776   999999999998887776556


Q ss_pred             CEEEEEEECCCCCEEEEeecCC
Q 016689          227 NTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       227 ~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ..+++|++|||||+||+.+...
T Consensus       234 ~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          234 NNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             CCEEEEEECTTSCEEEEEECCC
T ss_pred             CcEEEEEECCCCCEEEEEeCcc
Confidence            7788999999999999998754

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.67  E-value=8.1e-16  Score=127.16  Aligned_cols=119  Identities=18%  Similarity=0.257  Sum_probs=87.2

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceE---EEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      |..+++|+.|.|+|+++++        +||+++|||++.....  +..+.   ..++..+    ...+++......    
T Consensus         1 Mi~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----   62 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTT--------AFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----   62 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHH--------HHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----
T ss_pred             CCceEEEEEEEcCCHHHHH--------HHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----
Confidence            5678999999999999999        9999999999865431  11111   1144443    235666543221    


Q ss_pred             CCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          188 IGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       188 ~g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ...+..|++|.|+  |+++++++|+++|+++..+|....+ ..+.+|++|||||.|||++...
T Consensus        63 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           63 QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             CCCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             CCCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            1457889999995  9999999999999999887654433 4467899999999999998754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.67  E-value=1.1e-15  Score=128.97  Aligned_cols=124  Identities=17%  Similarity=0.213  Sum_probs=91.4

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecC-----------CCCcEEEEEeecCCCCcceEEEEecc--CCCc---
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAVLELTYN--HGVT---  314 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~lel~~~--~~~~---  314 (384)
                      .+++|+.|.|.|++++++||++ |||++..+...           ++......++..++.  +..+++...  ....   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCcccc
Confidence            3689999999999999999999 99998754321           123345566654321  345555432  1111   


Q ss_pred             --cccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          315 --EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       315 --~~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                        ....+.+..|++|.|+|+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++..+
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEeccC
Confidence              112345778999999999999999999999998887665543 478999999999999998753

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.67  E-value=5.1e-16  Score=146.66  Aligned_cols=157  Identities=20%  Similarity=0.256  Sum_probs=107.9

Q ss_pred             hhhhhhcccCCceeeccCCCcc-cCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           72 KALKLLRAEGSTIEASTSGNMA-PTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        72 ~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      ...++.||+|+.+++....... ..... .+.+.-.+ .....++.|+.|.|+|+++++        +||+++|||++..
T Consensus       101 ~~~~~~DPdG~~iel~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~hv~l~v~D~~~a~--------~FY~~~lG~~~~~  170 (297)
T 1lgt_A          101 GLITFADPFGLPLEIYYGASEVFEKPFL-PGAAVSGF-LTGEQGLGHFVRCVPDSDKAL--------AFYTDVLGFQLSD  170 (297)
T ss_dssp             EEEEEECTTSCEEEEEECCCBCTTSCCC-CSSSCSCB-CCGGGCSCEEEEECSCHHHHH--------HHHHHTTCCEEEE
T ss_pred             eEEEEECCCCCEEEEEECccccccCCcc-CCCccccc-ccCccccceEEEecCCHHHHH--------HHHHHhcCCeeee
Confidence            3568999999999998654321 00000 01110001 023468999999999999999        9999999999875


Q ss_pred             eeeC---CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHHHH---HHHHHcCCeeeeCCcccc
Q 016689          151 KRDI---PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       151 ~~~~---~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~~~---~~l~~~G~~~~~~p~~~~  224 (384)
                      ....   ++......|+..+.  .++.+.+...  +    ...++.|++|.|+|++++.   ++ +++|+++..+|...+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~--~----~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~  241 (297)
T 1lgt_A          171 VIDMKMGPDVTVPAYFLHCNE--RHHTLAIAAF--P----LPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHT  241 (297)
T ss_dssp             EEEEEEETTEEEEEEEEESSS--BSCSEEEECC--C----CSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEES
T ss_pred             EEeccCCCCccceEEEEEeCC--CcceEEEEcC--C----CCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccC
Confidence            4221   11112456766432  2334555432  1    1357899999999988766   88 999999998877766


Q ss_pred             CCCEEEEEEECCCCCEEEEeecC
Q 016689          225 GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .+...++||+|||||+|||++..
T Consensus       242 ~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          242 NDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             SSCCEEEEEECTTSCEEEEEECC
T ss_pred             CCCcEEEEEECCCCcEEEEecCC
Confidence            56677789999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.67  E-value=5.4e-16  Score=125.78  Aligned_cols=114  Identities=19%  Similarity=0.178  Sum_probs=83.5

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      +++.|+.|.|+|+++++        +||+++|||++....    +.  .+++..+.    ..+.+......+....+.+.
T Consensus         4 m~i~~v~l~v~D~~~a~--------~FY~~~lG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~   65 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVC--------ADLEHILDKKADYAN----DG--FAQFTIGS----HCLMLSQNHLVPLENFQSGI   65 (118)
T ss_dssp             CEEEEEEEECSCHHHHH--------HHHHHHHTSCCSEEE----TT--EEEEEETT----EEEEEESSCSSSCCCCCSCE
T ss_pred             ceeeEEEEEeCCHHHHH--------HHHHHHhCCeeEEeC----CC--EEEEEeCC----eEEEEEcCCCCCcccCCCeE
Confidence            58999999999999999        999999999986432    12  34555442    12333221111111223454


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                       |++|.|+|+++++++|+++|+++..+|...+. +.+.++++|||||.|||++.
T Consensus        66 -~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           66 -IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             -EEEEECSCHHHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             -EEEEEECCHHHHHHHHHHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence             89999999999999999999999877766554 34677899999999999875

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.67  E-value=4.3e-16  Score=131.89  Aligned_cols=121  Identities=18%  Similarity=0.197  Sum_probs=89.9

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--------CCcEEEEEeecCCCCcceEEEEeccCCCcc-----cc
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE-----YD  317 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-----~~  317 (384)
                      .+++||.|.|.|++++++||+++|||++..+...+        .+..  .++..++   +..+++.......+     ..
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD---GTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT---SCEEEEEECTTCCCSSSSTTC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC---CCEEEEEecCCCCcCCCCCCC
Confidence            47999999999999999999999999987532211        2222  3333322   34566654332211     12


Q ss_pred             CCCceeEEEEEcC--CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          318 KGNGYAQIAIGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       318 ~g~g~~hiaf~Vd--Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ...+..|++|.|+  |+++++++|+++|+++..+|...++  ++.+||+|||||.|||++.+.
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            3468899999998  9999999999999999887776655  479999999999999999764

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.67  E-value=2.7e-15  Score=124.45  Aligned_cols=118  Identities=20%  Similarity=0.224  Sum_probs=85.8

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++++||.|.|+|+++++        +||+++|||++....+    .  .+.+..+  + + .+.+......... ...+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~~----~--~~~~~~~--g-~-~~~l~~~~~~~~~-~~~~   67 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAY--------DFYVTKLGCKLARRYP----D--RITLDFF--G-D-QLVCHLSDRWDRE-VSMY   67 (135)
T ss_dssp             TTSEEEEEEEESCHHHHH--------HHHTTTTCCEEEEEET----T--EEEEEET--T-E-EEEEEECSCSCSS-CCSS
T ss_pred             CCccceEEEEcCCHHHHH--------HHHHHhcCCEeeccCC----C--cEEEEEe--C-C-EEEEEEcCccccc-CCCC
Confidence            468999999999999999        9999999999965432    1  3444432  1 1 2444332221111 2346


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccc---cCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~---~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ..|++|.++   |+++++++|+++|+++..+|...   ..+..+.+||+|||||+|||.+..+
T Consensus        68 ~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           68 PRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             CCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            789999986   59999999999999998776553   1345678999999999999998753

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.67  E-value=8.3e-16  Score=128.56  Aligned_cols=117  Identities=17%  Similarity=0.296  Sum_probs=85.5

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceE---EEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      |..+++|+.|.|+|+++++        +||+++|||++......  ..+.   ..++..+    ...+++......+   
T Consensus         1 Mi~~i~hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~~---   63 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMT--------RILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKLA---   63 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHH--------HHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCCS---
T ss_pred             CCceEEEEEEEeCCHHHHH--------HHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCCC---
Confidence            4568999999999999999        99999999998765321  1111   1144443    2356665432211   


Q ss_pred             CCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          188 IGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       188 ~g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                       ..+..|++|.|+  |+++++++|+++|+++..+|...+ ++.+.+|++|||||.|||++.
T Consensus        64 -~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           64 -ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             -SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             -CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence             457889999999  999999999999999987655443 345678999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.66  E-value=6.6e-16  Score=129.70  Aligned_cols=126  Identities=17%  Similarity=0.225  Sum_probs=91.7

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCC--CcceEEEEeccCCCcc------ccCC--C
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE--DKNAVLELTYNHGVTE------YDKG--N  320 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~lel~~~~~~~~------~~~g--~  320 (384)
                      .+++||.|.|.|++++++||+++|||++......++.+....++..+..  ..+..+++........      ...+  .
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   87 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   87 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCC
Confidence            4799999999999999999999999999766544444455566665431  1125677765332111      1233  6


Q ss_pred             ceeEEEEEcCCHHHHHHHHHHCCCeEe-cCCccCCCCCceEEEE--ECCCCCeEEEEecC
Q 016689          321 GYAQIAIGTDDVYKTAEAIKLSGGKIT-REPGPLPGINTKITAC--LDPDGWKSVFVDNL  377 (384)
Q Consensus       321 g~~hiaf~VdDvd~~~~~l~~~G~~i~-~~p~~~~~~~~~~~~~--~DPdG~~iElve~~  377 (384)
                      +..|++|.|+|+++++++|+++|+++. .+|...+++ .+.+|+  +|||||.|||++.+
T Consensus        88 g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           88 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             ceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecC
Confidence            788999999999999999999999987 445433343 256666  99999999999865

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.66  E-value=9.7e-16  Score=126.14  Aligned_cols=118  Identities=20%  Similarity=0.250  Sum_probs=87.7

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC---ccccCCCceeEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~---~~~~~g~g~~hiaf  327 (384)
                      .+++|+.|.|.|++++++||+++|||++....    ....  ++..+    ...+.+......   .......+..|++|
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~~--~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   78 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG----AGRI--ALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLCF   78 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEET----TTEE--EEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEec----CCeE--EEEcC----CEEEEEEcCCCCccccCCCCCCCccEEEE
Confidence            47999999999999999999999999997642    1222  23332    344555442211   11123567899999


Q ss_pred             EcCC-HHHHHHHHHHCCCeEecCCccCCCCC--ceEEEEECCCCCeEEEEecCc
Q 016689          328 GTDD-VYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~VdD-vd~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iElve~~~  378 (384)
                      .|+| +++++++|+++|+++..+|...++..  .+.+||+|||||.|||++..+
T Consensus        79 ~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           79 ITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9997 99999999999999887775544432  378999999999999999764

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.66  E-value=1.9e-15  Score=125.72  Aligned_cols=113  Identities=22%  Similarity=0.363  Sum_probs=86.8

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |..+++|+.|.|+|+++++        +||+++|||++....+  .    .+++..+    ...+++......  .....
T Consensus         1 Mi~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~--~~~~~   60 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASI--------AFYRDLLGFRLEARWD--Q----GAYLELG----SLWLCLSREPQY--GGPAA   60 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEET--T----EEEEEET----TEEEEEEECTTC--CCCCS
T ss_pred             CCceEeEEEEEeCCHHHHH--------HHHHHhcCCEEEEcCC--C----ceEEecC----CEEEEEEeCCCC--CCCCC
Confidence            4578999999999999999        9999999999876531  1    3455553    234556543211  12345


Q ss_pred             CceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          191 GFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       191 g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +..|++|.|+  |+++++++|+++|+++..++..    .++.+|++|||||.|||++..
T Consensus        61 ~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           61 DYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             SSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCC
T ss_pred             CcceEEEEccHHHHHHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEECC
Confidence            7889999998  9999999999999999876542    235788999999999999764

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.66  E-value=7e-16  Score=127.80  Aligned_cols=119  Identities=18%  Similarity=0.199  Sum_probs=81.8

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEe-eCCCCccEEEEEEecCCCCCCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLG-YGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      |..+|.||.|.|+|+++++        +||++ |||++..... +.+.+  +++. .+    ...+.+.....  .....
T Consensus         3 ~~~~i~hv~l~v~D~~~a~--------~FY~~-LG~~~~~~~~-~~~~~--~~~~~~~----~~~l~l~~~~~--~~~~~   64 (128)
T 3g12_A            3 LSLLITSITINTSHLQGML--------GFYRI-IGFQFTASKV-DKGSE--VHRAVHN----GVEFSLYSIQN--PQRSQ   64 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHH--------HHHHH-HTCCCEEC------CC--EEEEEET----TEEEEEEECCC--CSSCC
T ss_pred             ccceEEEEEEEcCCHHHHH--------HHHHH-CCCEEecccC-CCCCE--EEEEeCC----CeEEEEEECCC--CcCCC
Confidence            4468999999999999999        99999 9999865421 11122  3333 22    23455533222  11223


Q ss_pred             CCceEEEEEECCHHHHHHHHHHcCCe-eeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          190 TGFGHFGIAVEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~~~~~l~~~G~~-~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .+..|++|.|+|+++++++|+++|++ +..+|...++| .+ ++|+|||||+|||.+..+.
T Consensus        65 ~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           65 IPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             CCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC----
T ss_pred             CCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEeccc
Confidence            35568999999999999999999999 87777665543 44 8999999999999998653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.66  E-value=2.2e-15  Score=126.24  Aligned_cols=115  Identities=23%  Similarity=0.387  Sum_probs=87.7

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC-CCCCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-VDKYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~-~~~~~~g  189 (384)
                      |..+++|+.|.|+|+++++        +||+++|||++....+  .    .+++..+    ...+++..... .......
T Consensus         1 Mi~~i~hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~~~~~~~~   62 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSV--------TFWHELLGLTLHARWN--T----GAYLTCG----DLWVCLSYDEARQYVPPQE   62 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHH--------HHHHTTSCCEEEEEET--T----EEEEEET----TEEEEEEECTTCCCCCGGG
T ss_pred             CCceEEEEEEEeCCHHHHH--------HHHHhccCCEEEeecC--C----cEEEEEC----CEEEEEEECCCCCCCCCCC
Confidence            4678999999999999999        9999999999876532  1    3456554    23455654322 1112234


Q ss_pred             CCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          190 TGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .+..|++|.|+  |+++++++|+++|+++..++..    ..+.+|++|||||.|||++..
T Consensus        63 ~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           63 SDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             SCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence            57889999997  9999999999999999876542    346889999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.66  E-value=1.1e-15  Score=126.72  Aligned_cols=114  Identities=16%  Similarity=0.086  Sum_probs=86.6

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .++.|+.|.|+|+++++        +||+++|||++.....    .  .+.+..++   +..+.+...... ......+.
T Consensus        12 ~~i~~v~l~v~D~~~s~--------~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~l~~~~~~-~~~~~~~~   73 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERST--------DFYRFIFKKEPVFVTP----R--YVAFPSSG---DALFAIWSGGEE-PVAEIPRF   73 (132)
T ss_dssp             CCCCEEEEECSCHHHHH--------HHHHHHHTCCCSEECS----S--EEEEECST---TCEEEEESSSCC-CCTTSCCC
T ss_pred             ceeeEEEEEECCHHHHH--------HHHHHHcCCeEEEcCC----C--EEEEEcCC---CcEEEEEeCCCC-CcCCCCCc
Confidence            58999999999999999        9999999999865422    2  23333221   235555543321 11234578


Q ss_pred             eEEEEEECC---HHHHHHHHHH---cCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          193 GHFGIAVED---VAKTVDLVKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~---~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .|++|.|+|   +++++++|++   +|+++..+|...+.|  +.++++|||||+|||.+.
T Consensus        74 ~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           74 SEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            899999987   9999999999   999999887766544  788999999999999875

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.65  E-value=2.4e-15  Score=123.47  Aligned_cols=114  Identities=14%  Similarity=0.055  Sum_probs=86.8

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      ||..+..|+.|.|+|+++++        +||+++|||++...    ...  .+++..+    +..+.+......    ..
T Consensus         1 m~~~~~~~~~l~v~D~~~a~--------~FY~~~lG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~----~~   58 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAV--------EFWTDRLGFSRVFV----EDD--FAGVVRD----DVTLFISAVQDQ----VV   58 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEE----CSS--EEEEEET----TEEEEEEECSCT----TT
T ss_pred             CCcccceeEEEEcCCHHHHH--------HHHHHccCceEEec----CCC--EEEEEEC----CEEEEEEcCCCC----CC
Confidence            34567899999999999999        99999999999764    122  3455543    335555543221    11


Q ss_pred             CCceEEEEEECCHHHHHHHHHHc------CC--eeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          190 TGFGHFGIAVEDVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~~~~~l~~~------G~--~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .+..|++|.|+|+++++++|+++      |+  ++..+|...+.|  +.++++|||||.|||.+..
T Consensus        59 ~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           59 PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             GGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             CCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            24469999999999999999999      99  888888766543  7889999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.65  E-value=2.5e-15  Score=127.20  Aligned_cols=118  Identities=23%  Similarity=0.305  Sum_probs=86.3

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---CCCC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKY  186 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~  186 (384)
                      ++..+|+||.|.|+|+++++        +||+++|||++....   + .  .+++..+.    ..+.+.....   +...
T Consensus        23 m~i~~i~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~---~-~--~~~l~~g~----~~l~l~~~~~~~~~~~~   84 (147)
T 3zw5_A           23 MLIRRLDHIVMTVKSIKDTT--------MFYSKILGMEVMTFK---E-D--RKALCFGD----QKFNLHEVGKEFEPKAA   84 (147)
T ss_dssp             TSCEEEEEEEEEESCHHHHH--------HHHHHHHCCEEEEET---T-T--EEEEEETT----EEEEEEETTSCCSSCCS
T ss_pred             eecccccEEEEEeCCHHHHH--------HHHHHhcCCEEEecC---C-C--ceEEEECC----cEEEEEEcCCCcCcccC
Confidence            45679999999999999999        999999999997432   1 1  23455442    2444543211   1112


Q ss_pred             cCCCCceEEEEEEC-CHHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEee
Q 016689          187 DIGTGFGHFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       187 ~~g~g~~hi~~~v~-Dv~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~  245 (384)
                      ....|..|+++.+. |+++++++|+++|+++..+|....+  |..+.+||+|||||+|||.+
T Consensus        85 ~~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           85 HPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             SCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             CCCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            33457789999886 9999999999999998866644332  33467899999999999986

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.65  E-value=5.5e-16  Score=131.37  Aligned_cols=117  Identities=20%  Similarity=0.248  Sum_probs=86.2

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .++. +.|.|+|+++++        +||+++|||++..+...++..+..++++      .  +++.......  ....+.
T Consensus         6 ~~i~-i~l~v~Dl~~a~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~~~--~~~~~~   66 (144)
T 3r6a_A            6 LQIL-SRLYVADLNPAL--------EFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSEEA--LKPFRN   66 (144)
T ss_dssp             EEEE-EEEEESCHHHHH--------HHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCHHH--HGGGGG
T ss_pred             EEEE-EEEEECCHHHHH--------HHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCccc--CCCCcc
Confidence            3455 999999999999        9999999999876654444444444433      1  3343321111  111245


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCC
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  250 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  250 (384)
                      .|++|.|+|+++++++|+++|+++..+|...++|  +.+|++|||||.|||++..+.+
T Consensus        67 ~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           67 TQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             CCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC--
T ss_pred             eEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCcc
Confidence            7999999999999999999999998887766543  6789999999999999987654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.65  E-value=1.6e-15  Score=125.54  Aligned_cols=116  Identities=16%  Similarity=0.216  Sum_probs=81.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      .+.||.|.|+|++++++||++ |||++...... .+.+..+... +    ...+.+.....  ......+.+|++|.|+|
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~-~----~~~l~l~~~~~--~~~~~~~~~~l~f~v~d   76 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSEVHRAVH-N----GVEFSLYSIQN--PQRSQIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-T----TEEEEEEECCC--CSSCCCCSEEEEEEESC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCEEEEEeC-C----CeEEEEEECCC--CcCCCCCceEEEEEeCC
Confidence            589999999999999999999 99998654211 1123222211 1    34455533221  11223456899999999


Q ss_pred             HHHHHHHHHHCCCe-EecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          332 VYKTAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       332 vd~~~~~l~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +++++++++++|++ +..+|...+++  ..++|+|||||.|||.+.+.
T Consensus        77 vd~~~~~l~~~G~~~~~~~p~~~~~G--~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           77 LEKTVQELVKIPGAMCILDPTDMPDG--KKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             HHHHHHHHTTSTTCEEEEEEEECC-C--EEEEEECTTCCEEEEEC---
T ss_pred             HHHHHHHHHHCCCceeccCceeCCCc--cEEEEECCCCCEEEEEEecc
Confidence            99999999999999 88777777764  34999999999999998653

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.65  E-value=2.9e-15  Score=127.28  Aligned_cols=118  Identities=19%  Similarity=0.286  Sum_probs=86.4

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCc--------cEEEEEEecC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--------HFVVELTYNY  181 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~--------~~~lel~~~~  181 (384)
                      .|..++.|+.|.|+|+++++        +||+++|||++...   ++..  .+++..+....        .....+....
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~   87 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRAR--------AFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG   87 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHH--------HHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS
T ss_pred             ccCCceEEEEEEeCCHHHHH--------HHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecC
Confidence            36679999999999999999        99999999998752   2233  34454432110        1112222211


Q ss_pred             CCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          182 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       182 ~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                            ...++ |++|.|+|+++++++|+++|+++..+|.+.++ .++.+|++|||||.|||++..+
T Consensus        88 ------~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           88 ------EVTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             ------SSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             ------CCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence                  11455 99999999999999999999999887766552 2478899999999999999754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.65  E-value=1.2e-15  Score=129.85  Aligned_cols=120  Identities=17%  Similarity=0.134  Sum_probs=85.3

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC-CCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-~~~~g  189 (384)
                      |..++.||.|.|+|+++++        +||+++|||++....  +  .  .+++..++   ...+.+....... .....
T Consensus         3 m~~~i~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~--~--~--~~~~~~~~---g~~l~l~~~~~~~~~~~~~   65 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSE--------EFYKNLLDTQPIESS--P--T--FAMFVMKT---GLRLGLWAQEEIEPKAHQT   65 (148)
T ss_dssp             ----CEEEEEEESCHHHHH--------HHHHHHHTCCCSEEC--S--S--EEEEECTT---SCEEEEEEGGGCSSCCC--
T ss_pred             ccccccEEEEEeCCHHHHH--------HHHHHHcCCEEeccC--C--C--EEEEEcCC---CcEEEEecCCcCCccccCC
Confidence            4568999999999999999        999999999986542  1  2  34555422   2355554332211 11233


Q ss_pred             CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          190 TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       190 ~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .+..|++|.|+|   +++++++|+++|+++..+|...+.|  +.++++|||||+|||++..+.
T Consensus        66 ~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           66 GGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             --CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             CCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            467899999987   9999999999999998887766653  788999999999999998764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.65  E-value=2e-15  Score=126.12  Aligned_cols=120  Identities=17%  Similarity=0.132  Sum_probs=88.5

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecC------CCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY------GVD  184 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~------~~~  184 (384)
                      |.+++.|+.|.|+|+++++        +||++ |||++.....  ...  .+.+..+ .  ...+.+....      ...
T Consensus         1 M~~~l~hv~l~v~D~~~a~--------~FY~~-LG~~~~~~~~--~~~--~~~~~~~-~--~~~l~l~~~~~~~~~~~~~   64 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSL--------EFYRK-LGVEIPAEAD--SAP--HTEAVLD-G--GIRLAWDTVETVRSYDPEW   64 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHH--------HHHHT-TTCCCCGGGG--GCS--EEEEECT-T--SCEEEEEEHHHHHHHCTTC
T ss_pred             CcceeeEEEEEECCHHHHH--------HHHHH-cCCcEEecCC--CCc--eEEEEcC-C--CeEEEEecCccchhhCccc
Confidence            4578999999999999999        99998 9999865432  222  3333331 1  2345554321      111


Q ss_pred             CCcCCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          185 KYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ....+.+..|++|.|+   |+++++++|+++|+++..+|...+. +.+.+|++|||||.|||.+..
T Consensus        65 ~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           65 QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             CCCBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEEC
T ss_pred             CCCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            1123457889999999   9999999999999999887766654 467889999999999999987

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.65  E-value=2.6e-15  Score=124.51  Aligned_cols=114  Identities=16%  Similarity=0.111  Sum_probs=87.1

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+++||.|.|.|++++++||+++|||++.....    .+..  +..++   +..+.+...... .....++..|++|.|+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~-~~~~~~~~~~~~~~v~   81 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEE-PVAEIPRFSEIGIMLP   81 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCC-CCTTSCCCEEEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCC-CcCCCCCcceEEEEeC
Confidence            479999999999999999999999999865432    2332  22211   345666543321 1123356789999998


Q ss_pred             C---HHHHHHHHHH---CCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 D---VYKTAEAIKL---SGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 D---vd~~~~~l~~---~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |   ++++++++++   +|+++..+|...++  ++.+||+|||||.|||.+.
T Consensus        82 ~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           82 TGEDVDKLFNEWTKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SHHHHHHHHHHHHHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            6   9999999999   99999988877776  4889999999999999874

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.64  E-value=3e-15  Score=124.73  Aligned_cols=120  Identities=19%  Similarity=0.176  Sum_probs=88.0

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-ccC-CCceeEEEEEc
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDK-GNGYAQIAIGT  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~-g~g~~hiaf~V  329 (384)
                      ...++.|.|+|++++++||+++|||++..+...+ +......+..+    ...+.+........ ... +.+.+|++|.|
T Consensus         2 ~~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v   76 (137)
T 3itw_A            2 SHMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWV   76 (137)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEE
T ss_pred             CeEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEe
Confidence            3467899999999999999999999998665433 32333444432    23455543221111 112 23334999999


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|+++++++++++|+++..+|...+++ .+.++|+|||||.|||++..
T Consensus        77 ~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           77 SDVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC
T ss_pred             CCHHHHHHHHHHcCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEc
Confidence            999999999999999999888777764 48999999999999999975

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.64  E-value=2.4e-15  Score=141.69  Aligned_cols=157  Identities=21%  Similarity=0.236  Sum_probs=107.5

Q ss_pred             hhhhhhcccCCceeeccCCCcc-cCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           72 KALKLLRAEGSTIEASTSGNMA-PTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        72 ~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      .++++.||+|+.+++....... ...+. .+.+.-.+ .+..++++|+.|.|+|+++++        +||+++|||++..
T Consensus       101 ~~~~~~DPdG~~iel~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~hv~l~v~D~~~a~--------~FY~~~lG~~~~~  170 (292)
T 1kw3_B          101 GLLCLQDPFGLPLEIYYGPAEIFHEPFL-PSAPVSGF-VTGDQGIGHFVRCVPDTAKAM--------AFYTEVLGFVLSD  170 (292)
T ss_dssp             EEEEEECTTSCEEEEEECCCBCTTSCCC-CSSSCCCB-CCGGGCSCEEEEECSCHHHHH--------HHHHHTTCCEEEE
T ss_pred             EEEEEECCCCCEEEEEECccccccCCCC-CCCCcccc-ccCCcccceEEEecCCHHHHH--------HHHHhccCCEEee
Confidence            3567999999999998654321 10010 01110001 134578999999999999999        9999999999875


Q ss_pred             eeeCC--CC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCcccc
Q 016689          151 KRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       151 ~~~~~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~  224 (384)
                      ....+  .+ ....+|+..+.  .++.+.+....      ...++.|++|.|+|+++   ++++|+ +|+++..+|....
T Consensus       171 ~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~  241 (292)
T 1kw3_B          171 IIDIQMGPETSVPAHFLHCNG--RHHTIALAAFP------IPKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHT  241 (292)
T ss_dssp             EEEEEEETTEEEEEEEEESSS--BSCSEEEECCS------CSSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEES
T ss_pred             eeecccCCCccceEEEEEECC--CcceEEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccC
Confidence            43221  11 22456666542  23344554321      13578999999998665   678999 9999988887766


Q ss_pred             CCCEEEEEEECCCCC-EEEEeecC
Q 016689          225 GGNTVIAFIEDPDGY-KFELLERG  247 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~-~iel~~~~  247 (384)
                      .+..+++||+||||| +|||.+..
T Consensus       242 ~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          242 NDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             SSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CCCeEEEEEECCCCCeeEEEEECC
Confidence            566778899999999 99999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.64  E-value=2.6e-15  Score=121.65  Aligned_cols=113  Identities=19%  Similarity=0.140  Sum_probs=82.8

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      ++.|+.|.|+|++++++||+++|||++....  +  .+  ..+..+    ...+.+......+....+.+ .|++|.|+|
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~-~~~~~~v~d   73 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYAN--D--GF--AQFTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVED   73 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--TE--EEEEET----TEEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--CE--EEEEeC----CeEEEEEcCCCCCcccCCCe-EEEEEEECC
Confidence            5889999999999999999999999986432  1  23  233332    12333332211111122334 589999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +++++++++++|+++..+|...+++ .+.+||+|||||.|||++.
T Consensus        74 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           74 VDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            9999999999999998888766664 4889999999999999974

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.64  E-value=1.4e-15  Score=129.01  Aligned_cols=120  Identities=21%  Similarity=0.298  Sum_probs=89.5

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC-----CC
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VD  184 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~-----~~  184 (384)
                      ||..++.|+.|.|+|+++++        +||+++|||++....    +  ..+++..+    ...+.+.....     ..
T Consensus         1 MM~~~i~hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~~~~   62 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASA--------RFYGEGFGWAPVFRN----P--EIIFYQMN----GFVLATWLVQNLQEDVGV   62 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHH--------HHHHHTSCCCCSEEC----S--SEEEEECS----SSEEEEEEHHHHHHHHSS
T ss_pred             CCccceEEEEEEcCCHHHHH--------HHHHHhcCCEeecCC----C--CEEEEEcC----CEEEEEEeccccccccCC
Confidence            45679999999999999999        999999999986542    2  24555543    23566654321     00


Q ss_pred             CCcCCCCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          185 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +...+.+..|++|.|   +|+++++++|+++|+++..+|...+.| .+.+|++|||||.|||.+...
T Consensus        63 ~~~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           63 AVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             CCCSSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTT
T ss_pred             CCCCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCC
Confidence            111245778999999   899999999999999998877665544 478899999999999998743

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.64  E-value=1.1e-15  Score=123.90  Aligned_cols=113  Identities=19%  Similarity=0.256  Sum_probs=83.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..++ |+.|.|+|+++++        +||+++|||++...   + + + .+++..+. ..+..+.+.....     ...+
T Consensus         6 i~~i-~v~l~v~d~~~a~--------~FY~~~lG~~~~~~---~-~-~-~~~~~~~~-~~~~~l~l~~~~~-----~~~~   64 (119)
T 2pjs_A            6 VRRV-VANIATPEPARAQ--------AFYGDILGMPVAMD---H-G-W-IVTHASPL-EAHAQVSFAREGG-----SGTD   64 (119)
T ss_dssp             EEEE-EEEEECSCGGGGH--------HHHTTTTCCCEEEE---C-S-S-EEEEEEEE-EEEEEEEEESSSB-----TTBC
T ss_pred             eeEE-EEEEEcCCHHHHH--------HHHHHhcCCEEEec---C-C-E-EEEEecCC-CCcEEEEEEcCCC-----CCCc
Confidence            4567 9999999999999        99999999998753   1 1 2 33344321 1133455543211     1235


Q ss_pred             ceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          192 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       192 ~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ..|++|.|+|+++++++|+++|+++..+|...+.| .+.+|++|||||.|||+++
T Consensus        65 ~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           65 VPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             eeEEEEEECCHHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            67899999999999999999999998777665543 5788999999999999985

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.64  E-value=3.3e-15  Score=126.49  Aligned_cols=119  Identities=21%  Similarity=0.365  Sum_probs=88.8

Q ss_pred             cccceeeEEEEEeCCHHHHHhhcCCChhHHh---hhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---C
Q 016689          110 SDKRRMLHVVYRVGDLDKTINSLGCGYCRFY---TECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---V  183 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY---~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~  183 (384)
                      .+..++.|+.|.|+|+++++        +||   +++|||++.....  .   ...|+. +    ...++|.....   .
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~--------~FY~~~~~~LG~~~~~~~~--~---~~~~~~-g----~~~l~l~~~~~~~~~   77 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESI--------AFWDWLLGELGYEDYQSWS--R---GKSYKH-G----KTYLVFVQTEDRFQT   77 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHH--------HHHHHHHHHTTCEEEEEET--T---EEEEEE-T----TEEEEEEECCGGGSC
T ss_pred             ccccceeEEEEEeCCHHHHH--------HHHHhhhhhCCCEEEEecC--C---CceEec-C----CeEEEEEEcCCCccc
Confidence            44568999999999999999        999   9999999876532  1   124554 3    24666665432   1


Q ss_pred             CCCc-CCCCceEEEEEEC---CHHHHHHHHHHcCCeeee-CCccccCC-CEEEEEEECCCCCEEEEeec
Q 016689          184 DKYD-IGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTR-EPGPVKGG-NTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       184 ~~~~-~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~-~p~~~~~g-~~~~~~~~DPdG~~iel~~~  246 (384)
                      .+.. ...|+.|++|.|+   |+++++++|+++|+++.. +|.+...+ +.+.+|++|||||.|||+++
T Consensus        78 ~~~~~~~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           78 PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCCTTSSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             ccccccCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            1111 2357889999999   899999999999999987 45544432 45688999999999999863

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.63  E-value=2.4e-15  Score=127.19  Aligned_cols=116  Identities=19%  Similarity=0.233  Sum_probs=87.9

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccc-cCCCceeEEEEEc
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY-DKGNGYAQIAIGT  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~-~~g~g~~hiaf~V  329 (384)
                      .++.|+.|.|.|++++++||+++|||++..+.  +  .+..  +..++   ...+.+.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TFSL--FVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TEEE--EECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--CeEE--EEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            37999999999999999999999999987554  1  2333  33221   345666543222121 2235778999999


Q ss_pred             C---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 D---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 d---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +   |+++++++|+++|+++..+|...++  ++.+||+|||||.|||+++.
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   5899999999999999888876666  48899999999999999865

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.63  E-value=2.7e-15  Score=126.22  Aligned_cols=112  Identities=14%  Similarity=0.248  Sum_probs=85.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .++.||.|.|.|++++++||+++|||++..+..  +..+..+.++  .  ....+.+....      ...+..|++|.|+
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~--~~~~l~l~~~~------~~~~~~h~~~~v~   94 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G--RAGMVVLQEEK------ENWQQQHFSFRVE   94 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T--TTEEEEEEECC------SSCCCCEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C--CCcEEEEeccC------CCCCCceEEEEEe
Confidence            479999999999999999999999999976642  2233333333  2  25667776531      2346679999996


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                        |+++++++|+++|+++. +|...+.+.++.+||+|||||.|||++
T Consensus        95 ~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           95 KSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence              99999999999999988 343333333589999999999999986

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.63  E-value=2.8e-15  Score=127.19  Aligned_cols=118  Identities=18%  Similarity=0.266  Sum_probs=86.2

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC---ccccCCCceeEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~---~~~~~g~g~~hiaf  327 (384)
                      .+++||.|.|.|++++++||+++|||++..+.   + .+..  +..+    ...+.+......   .......+..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~~--l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRKA--LIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEEE--EEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeEE--EEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            36999999999999999999999999997652   1 2322  3332    244555432211   11223457889999


Q ss_pred             EcC-CHHHHHHHHHHCCCeEecCCccCCCCC--ceEEEEECCCCCeEEEEecCc
Q 016689          328 GTD-DVYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~Vd-Dvd~~~~~l~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iElve~~~  378 (384)
                      .++ |+++++++|+++|+++..+|...+++.  ++.+||+|||||.|||++...
T Consensus        92 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           92 ITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            986 999999999999999887776544432  378999999999999998653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.63  E-value=5.5e-15  Score=142.51  Aligned_cols=158  Identities=21%  Similarity=0.179  Sum_probs=104.0

Q ss_pred             cchhhhhhcccCCceeeccCCCcccCc-ccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEE
Q 016689           70 GAKALKLLRAEGSTIEASTSGNMAPTS-NTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKL  148 (384)
Q Consensus        70 g~~~~~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~  148 (384)
                      |....++.||+|+.+++.......+.. .+..+... . ..+...++.|+.|.|+|+++++        +||+++|||++
T Consensus       137 G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~-~-~~~~~~~l~hv~l~v~Dl~~a~--------~FY~~~LG~~~  206 (338)
T 1zsw_A          137 NRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEV-P-AKHQIQGMGSVELTVRRLDKMA--------STLTEIFGYTE  206 (338)
T ss_dssp             TEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSS-C-GGGSCCEEEEEEEEESCHHHHH--------HHHHHTTCCEE
T ss_pred             CcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCC-C-ccccCceEEEEEEEECCHHHHH--------HHHHHhcCCEE
Confidence            445788999999999998643221100 00000000 0 1345679999999999999999        99999999998


Q ss_pred             EeeeeCCCCceEEEEEeeCCCCc-cEEEEEEecCCCCCCcCCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCcccc
Q 016689          149 LRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYNYGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       149 ~~~~~~~~~~~~~~~l~~g~~~~-~~~lel~~~~~~~~~~~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~  224 (384)
                      .....    .+ ..| ..++.+. ...+.+... .........++.|++|.|+   |+++++++|+++|+++. +|... 
T Consensus       207 ~~~~~----~~-~~~-~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~-  277 (338)
T 1zsw_A          207 VSRND----QE-AIF-QSIKGEAFGEIVVKYLD-GPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR-  277 (338)
T ss_dssp             EEECS----SE-EEE-ESSTTCSTTCEEEEECC-SSBCBCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC-
T ss_pred             EeecC----Ce-EEE-EecCCCCceEEEEeccC-CCCCCCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeec-
Confidence            76532    22 233 3321111 123333221 1111112246889999999   69999999999999985 55433 


Q ss_pred             CCCEEEEEEECCCCCEEEEeecC
Q 016689          225 GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                       ++.+.+||+|||||.|||++..
T Consensus       278 -~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          278 -FYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             -SSEEEEEEECTTCCEEEEEEEE
T ss_pred             -CceEEEEEECCCCCEEEEEEcC
Confidence             4567899999999999999865

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.63  E-value=4.7e-15  Score=122.52  Aligned_cols=115  Identities=18%  Similarity=0.219  Sum_probs=84.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEE---EEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT---IAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      +++|+.|.|+|++++++||+++|||++.....  +..+.   ..++..+    ...+.+......    ...+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~~   73 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAFQ   73 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEEE
Confidence            58999999999999999999999999875432  11111   0022222    345666543211    24577899999


Q ss_pred             c--CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          329 T--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       329 V--dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |  +|+++++++++++|+++..+|...+++ ++.+||+|||||.|||++..
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           74 IQSEEVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCGGGHHHHHHHHHHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSS
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCC
Confidence            9  599999999999999998887655443 48899999999999999966

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.63  E-value=2.3e-15  Score=125.89  Aligned_cols=121  Identities=18%  Similarity=0.279  Sum_probs=86.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      .+.||.|.|+|++++++||+++|||++..+... +..+..+++..+..  ...+++....+..+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            467889999999999999999999998765432 23355666665422  345666543332223344577899999999


Q ss_pred             H---HHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          332 V---YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       332 v---d~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +   ++++++|+++|+++..++.+.....+  .||+|||||.|||++..
T Consensus        88 ~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            9   99999999999998733221111113  27999999999999864

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.63  E-value=2.3e-15  Score=127.28  Aligned_cols=116  Identities=18%  Similarity=0.228  Sum_probs=87.8

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCC-cCCCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-DIGTG  191 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g  191 (384)
                      .++.|+.|.|+|+++++        +||+++|||++....  +  .  .+++..++   ...+++.......+. ..+.+
T Consensus        24 ~~l~hv~l~v~Dl~~a~--------~FY~~~LG~~~~~~~--~--~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~   86 (144)
T 2kjz_A           24 THPDFTILYVDNPPAST--------QFYKALLGVDPVESS--P--T--FSLFVLAN---GMKLGLWSRHTVEPKASVTGG   86 (144)
T ss_dssp             CCCCEEEEEESCHHHHH--------HHHHHHHTCCCSEEE--T--T--EEEEECTT---SCEEEEEETTSCSSCCCCSSS
T ss_pred             CceeEEEEEeCCHHHHH--------HHHHHccCCEeccCC--C--C--eEEEEcCC---CcEEEEEeCCCCCCccCCCCC
Confidence            38999999999999999        999999999986543  1  2  34454432   235666543222111 23457


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ..|++|.|+   |+++++++|+++|+++..+|...+.  ++.+|++|||||.|||+++.
T Consensus        87 ~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           87 GGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            889999998   5899999999999999888776553  37889999999999999864

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.63  E-value=5.8e-15  Score=122.96  Aligned_cols=120  Identities=16%  Similarity=0.138  Sum_probs=87.1

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCC-C-CCcCCCCce
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDIGTGFG  193 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~-~~~~g~g~~  193 (384)
                      ..+.|.|+|+++++        +||+++|||++..+...+ +....+.+..+  +  ..+.+...... . ....+.+..
T Consensus         4 ~~i~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~--~--~~l~l~~~~~~~~~~~~~~~~~~   70 (137)
T 3itw_A            4 MVVELAYTDPDRAV--------DWLVRVFGFRLLLRQPAI-GTIRHADLDTG--G--GIVMVRRTGEPYTVSCAGGHTCK   70 (137)
T ss_dssp             CEEEEEESCHHHHH--------HHHHHHHCCEEEEEESSS-SSCSEEEEECS--S--SEEEEEETTCCSSCEECCCCCCC
T ss_pred             EEEEEEECCHHHHH--------HHHHHccCCEEEEEecCC-CcEEEEEEecC--C--eEEEEEecCCCcCccCCCCCcEE
Confidence            46899999999999        999999999998665433 33345555543  2  24455432211 1 111223444


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      |++|.|+|+++++++|+++|+++..+|...+. +.+.++++|||||.|||.+..+.
T Consensus        71 ~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           71 QVIVWVSDVDEHFMRSTAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC--
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcCC
Confidence            89999999999999999999999887766654 45788999999999999998643

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.62  E-value=8.3e-15  Score=141.10  Aligned_cols=160  Identities=19%  Similarity=0.308  Sum_probs=115.0

Q ss_pred             hhhhhhcccccccccc----c-------chhhhhhcccCCceeeccCCCcccCcccCCcchhhcccccccceeeEEEEEe
Q 016689           54 LALFQLGAAIPQSHFF----G-------AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRV  122 (384)
Q Consensus        54 ~~~~~~~~~~p~~~~~----g-------~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V  122 (384)
                      .++.|+++.+++-..-    |       ..+.++.||+|+.+|++....                  .....+.|+.|.|
T Consensus       106 ~g~~hiaf~V~d~~~~l~~~G~~~~~~~~~~~~~~DPdG~~iel~~~~~------------------~~~~~i~hv~L~v  167 (330)
T 3zi1_A          106 NDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSL------------------PQSDPVLKVTLAV  167 (330)
T ss_dssp             SSEEEEEEECHHHHHHHHHHTCCCEEEETTEEEEECTTSCEEEEESSCC------------------TTSCSEEEEEEEE
T ss_pred             CCeeEEEEECchHHHHHHHcCCceeccCCceEEEECCCCCEEEEEecCC------------------CCCCceeEEEEEC
Confidence            3778888887753211    1       125667778887777775431                  0123588999999


Q ss_pred             CCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEEC--
Q 016689          123 GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--  200 (384)
Q Consensus       123 ~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~--  200 (384)
                      .|+++++        +||+++|||++.......+    .+|+.++..  +..+++.....  ....+.++.|++|.|+  
T Consensus       168 ~Dl~~a~--------~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~  231 (330)
T 3zi1_A          168 SDLQKSL--------NYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQK  231 (330)
T ss_dssp             SCHHHHH--------HHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGG
T ss_pred             CCHHHHH--------HHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcc
Confidence            9999999        9999999999987654321    467776533  45667654432  2233467889999996  


Q ss_pred             CHHHHHHHHHHcCCeeeeCCccc--c-CCCEEEEEEECCCCCEEEEeecC
Q 016689          201 DVAKTVDLVKAKGGKVTREPGPV--K-GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       201 Dv~~~~~~l~~~G~~~~~~p~~~--~-~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      |+++++++|+++|+++..++...  + .++.+.+||+|||||.|||++..
T Consensus       232 dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          232 ELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             GHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             cHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            79999999999999988766543  1 12457899999999999999874

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.62  E-value=1.9e-15  Score=128.03  Aligned_cols=111  Identities=21%  Similarity=0.259  Sum_probs=84.5

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  335 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~  335 (384)
                      +.|.|+|++++++||+++|||++..+...++..+.+..++      .  +.+.....  ......+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~--~~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSE--EALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCH--HHHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCc--ccCCCCcceEEEEEeCCHHHH
Confidence            8899999999999999999999876654444444444433      1  23332211  111123458999999999999


Q ss_pred             HHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          336 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       336 ~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +++|+++|+++..+|...++  ++.+||+|||||.|||++...
T Consensus        80 ~~~l~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           80 KTFLEENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             HHHHHHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            99999999999988877777  478999999999999999764

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.62  E-value=1.2e-15  Score=131.09  Aligned_cols=118  Identities=19%  Similarity=0.224  Sum_probs=87.6

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC--------
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG--------  182 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~--------  182 (384)
                      +..++.||.|.|+|+++++        +||+++|||++.....  +   ..+++..+    ...+.+.....        
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~--------~FY~~vLG~~~~~~~~--~---~~~~~~~g----~~~~~l~~~~~~~~~~~~~   67 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAE--------AFYRDVFGLEMVLKLP--G---QLVFFKCG----RQMLLLFDPQESSRADANN   67 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHH--------HHHHHHSCCEEEEEET--T---TEEEEEET----TEEEEEECHHHHTCCCTTC
T ss_pred             ccccccEEEEEeCCHHHHH--------HHHHHhcCCEEEEecC--C---cEEEEeCC----CEEEEEEecCCccCccccC
Confidence            3468999999999999999        9999999999976542  1   24555544    22444433111        


Q ss_pred             CCCCcCCCCceEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          183 VDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       183 ~~~~~~g~g~~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ..+...+.|+.|++|.|   +|+++++++|+++|+++..++. .. ++.+.+|++|||||+|||+++.
T Consensus        68 ~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~-~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           68 PIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WP-NGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             CSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CT-TSCEEEEEECTTCCEEEEEEGG
T ss_pred             CCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-cc-CCcEEEEEECCCCCEEEEEeCC
Confidence            11122335789999999   8999999999999999875442 22 3567889999999999999975

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.62  E-value=2.2e-15  Score=143.03  Aligned_cols=156  Identities=17%  Similarity=0.256  Sum_probs=105.0

Q ss_pred             hhhhhcccCCceeeccC-CCcccCcccCCcchhhc-ccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           73 ALKLLRAEGSTIEASTS-GNMAPTSNTVTEQNVLD-WVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        73 ~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      ..++.||+|+.++++.. .......+ .+..+.-. + .....+++||.|.|+|+++++        +|| ++|||++..
T Consensus       105 ~~~~~DPdG~~iel~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~i~hv~l~v~D~~~s~--------~FY-~vLG~~~~~  173 (305)
T 2wl9_A          105 LVKLHDPGGNPTEIFYGPQVDTSSPF-HPGRPMFGKF-VTEGQGLGHIIIREDDVEEAT--------RFY-RLLGLEGAV  173 (305)
T ss_dssp             EEEEECTTCCEEEEEEEECBCTTSCC-CCSSCCSSCB-CCTTTCSCEEEECCSCHHHHH--------HHH-HHHTCEEEE
T ss_pred             EEEEECCCCCEEEEEECCCccCCCCc-CCCCCcccce-ecCCceeeeEEEECCCHHHHH--------HHH-HHcCCeeee
Confidence            56789999999999865 21110000 00001000 0 123568999999999999999        999 999999864


Q ss_pred             eeeCC--CC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCcccc
Q 016689          151 KRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVK  224 (384)
Q Consensus       151 ~~~~~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~  224 (384)
                      ....+  .+ .....|+..+..  ++.+.+...      ....++.|++|.|+|   +++++++|+++|+++..+|....
T Consensus       174 ~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~  245 (305)
T 2wl9_A          174 EYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHS  245 (305)
T ss_dssp             CBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECT
T ss_pred             eEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccC
Confidence            32211  11 223456665432  233444321      123578999999998   56688999999999988776665


Q ss_pred             CCCEEEEEEECCCCCEEEEeecC
Q 016689          225 GGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       225 ~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .+..+++||+|||||+|||+...
T Consensus       246 ~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          246 NDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             TTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCcEEEEEECCCCCEEEEEeCC
Confidence            55667889999999999999864

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.62  E-value=3e-15  Score=122.81  Aligned_cols=113  Identities=18%  Similarity=0.189  Sum_probs=84.2

Q ss_pred             Cceeeeeec--CChHHHHHHHHHhhCCeEeeeecCC-CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          252 PLCQVMLRV--GDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V--~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      +++||.|.|  .|++++++||+++|||++..+.... ....  .++..+    ...+.+......    ...+..|++|.
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~f~   79 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG--CWFKCG----NQEIHIGVEQNF----NPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCC--EEEEET----TEEEEEEECTTC----CCCSSSCEEEE
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCc--eEEEeC----CEEEEEEecCCC----CCCCceEEEEE
Confidence            689999999  8999999999999999987543211 0111  223332    345555543211    12467899999


Q ss_pred             cCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          329 TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       329 VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+|+++++++++++|+++..+|. .++  ++.+||+|||||.|||+++.
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQELIKQGIEVIDDHA-RPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHHHHTTCCCEEECS-STT--EEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHcCCCccCCCC-CCC--eeEEEEECCCCCEEEEEeCC
Confidence            99999999999999999887763 343  58899999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.61  E-value=2.3e-15  Score=142.78  Aligned_cols=158  Identities=15%  Similarity=0.186  Sum_probs=105.7

Q ss_pred             chhhhhhcccCCceeeccCCCcccCcccCCc-chhhc-ccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEE
Q 016689           71 AKALKLLRAEGSTIEASTSGNMAPTSNTVTE-QNVLD-WVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKL  148 (384)
Q Consensus        71 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~  148 (384)
                      +...++.||+|+.+++........ ..+..+ .+... | ....++++|+.|.|+|+++++        +|| ++|||++
T Consensus       106 ~~~~~~~DPdG~~iel~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~hv~l~v~D~~~a~--------~FY-~~lG~~~  174 (302)
T 2ehz_A          106 LGLMKTEDPGGNPTEIFWGPRIDM-SNPFHPGRPLHGKF-VTGDQGLGHCIVRQTDVAEAH--------KFY-SLLGFRG  174 (302)
T ss_dssp             EEEEEEECTTSCEEEEEEEECBCT-TSCCCCSSCCSSCB-CCGGGCSCEEEECCSCHHHHH--------HHH-HHTTCBC
T ss_pred             eEEEEEECCCCCEEEEEECCCccC-CCCccCCCCcccce-ecCCCccceEEEEcCCHHHHH--------HHH-HhcCCee
Confidence            345689999999999986421100 001111 11100 1 133468999999999999999        999 9999997


Q ss_pred             EeeeeCC--CC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHH---HHHHHHHcCCeeeeCCcc
Q 016689          149 LRKRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGP  222 (384)
Q Consensus       149 ~~~~~~~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~  222 (384)
                      ......+  .+ .....|+..+.  .++.+.+...  +    ...++.|++|.|+|+++   ++++|+++|+++..+|..
T Consensus       175 ~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~--~----~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~  246 (302)
T 2ehz_A          175 DVEYRIPLPNGMTAELSFMHCNA--RDHSIAFGAM--P----AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGI  246 (302)
T ss_dssp             CEEEEEECTTSCEEEEEEEBSSS--BSCSEEECSC--C----CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             eeEEeccCCCCcceEEEEEEeCC--CCcEEEEecC--C----CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcc
Confidence            6432211  22 23456666532  2233444321  1    12578999999998765   677999999999887766


Q ss_pred             ccCCCEEEEEEECCCCCEEEEeecC
Q 016689          223 VKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       223 ~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ...+..+++|++|||||+|||+...
T Consensus       247 ~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          247 HANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             CTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             cCCCCceEEEEECCCCcEEEEEECc
Confidence            6555667899999999999998763

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.61  E-value=2.9e-15  Score=120.31  Aligned_cols=108  Identities=21%  Similarity=0.289  Sum_probs=82.0

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ++++|+.|.|+|+++++        +||+++|||++....   +..  .+++..+.   +..+.+......    ...+.
T Consensus         2 ~~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~---~~~--~~~~~~~~---~~~l~l~~~~~~----~~~~~   61 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAR--------EFLEKYFGLTCSGTR---GNA--FAVMRDND---GFILTLMKGKEV----QYPKT   61 (113)
T ss_dssp             CCCCEEEEEESCHHHHH--------HHHHHHHCCEEEEEE---TTT--EEEEECTT---CCEEEEEECSSC----CCCTT
T ss_pred             CeeEEEEEEeCCHHHHH--------HHHHHhCCCEEeccC---CCc--EEEEEcCC---CcEEEEEeCCCC----CCCce
Confidence            57999999999999999        999999999987542   122  45665432   345666543221    13578


Q ss_pred             eEEEEEE---CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          193 GHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       193 ~hi~~~v---~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      .|++|.|   +|+++++++|+++|+++. +|...  + .+.+|++|||||.|||+
T Consensus        62 ~~~~~~v~~~~d~~~~~~~l~~~G~~~~-~p~~~--~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           62 FHVGFPQESEEQVDKINQRLKEDGFLVE-PPKHA--H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHCCCEEe-cCcCC--C-cEEEEEECCCCcEEEEe
Confidence            8999999   889999999999999975 45332  3 57889999999999986

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.61  E-value=6.6e-15  Score=123.36  Aligned_cols=117  Identities=17%  Similarity=0.161  Sum_probs=83.9

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEec-----CCC--CCC
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-----YGV--DKY  186 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~-----~~~--~~~  186 (384)
                      ++.|+.|.|+|+++++        +||+++|||++......  ..  .+++..+  .  ..+.+...     ...  ...
T Consensus         8 ~i~hv~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~--~~--~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~   71 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMS--------AFYQQVFGFQEIESIRS--PI--FRGLDTG--K--SCIGFNAHEAYELMQLAQFSE   71 (141)
T ss_dssp             EEEEEEEECSCHHHHH--------HHHHHHHCCEECGGGCB--TT--EEEEECS--S--SEEEEECTHHHHHTTCGGGCC
T ss_pred             cccEEEEEECCHHHHH--------HHHHHhcCCeeecccCC--Cc--eEEeecC--C--EEEEEcCccccccccccccCC
Confidence            8999999999999999        99999999998644321  22  2344432  1  23333211     010  111


Q ss_pred             cCCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          187 DIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       187 ~~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ..+.+. |++|.|+   |+++++++|+++|+++..+|...++ +.+.+||+|||||.|||++...
T Consensus        72 ~~~~~~-~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           72 TSGIKF-LLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             CBSCCE-EEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCCCeE-EEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            234454 9999999   5999999999999999887765543 4778899999999999998754

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.61  E-value=6e-15  Score=123.30  Aligned_cols=115  Identities=17%  Similarity=0.197  Sum_probs=83.3

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEE---EEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT---IAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      +++|+.|.|+|++++++||+++|||++..+...  ..+.   ..++..+    ...+.+......    ...+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~----~~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL----AERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC----SSCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC----CCCCeeEEEEE
Confidence            589999999999999999999999998755321  1110   0022222    345666543211    14577899999


Q ss_pred             cC--CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          329 TD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       329 Vd--Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |+  |+++++++++++|+++..+|...+++ ++.+||+|||||.|||++.+
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCCC-eEEEEEECCCCCEEEEEeCC
Confidence            98  99999999999999988776555543 58899999999999999954

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.61  E-value=1.3e-14  Score=136.57  Aligned_cols=149  Identities=18%  Similarity=0.226  Sum_probs=102.7

Q ss_pred             chhhhhhcccCCceeeccCCCcccCcccCCcchhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEe
Q 016689           71 AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLR  150 (384)
Q Consensus        71 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~  150 (384)
                      +...++.||+||.+++........       ..    ......++.|+.|.|+|+++++        +||+++|||++..
T Consensus       132 g~~~~~~DP~G~~i~l~~~~~~~~-------~~----~~~~~~~~~~~~l~v~D~~~a~--------~FY~~vlG~~~~~  192 (282)
T 3oxh_A          132 GRMSFITDPTGAAVGLWQANRHIG-------AT----LVNETGTLIWNELLTDKPDLAL--------AFYEAVVGLTHSS  192 (282)
T ss_dssp             EEEEEEECTTCCEEEEEEESSCCS-------CS----BCSSTTSEEEEEEECSCHHHHH--------HHHHHHHCCEEEE
T ss_pred             eEEEEEECCCCCEEEEEEccccCC-------cc----ccCCCCccEEEEEEcCCHHHHH--------HHHHHHhCCeeee
Confidence            457789999999999886433211       00    0112357999999999999999        9999999999875


Q ss_pred             eeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEE
Q 016689          151 KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI  230 (384)
Q Consensus       151 ~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~  230 (384)
                      ....+...+  +++..+.   .....+... .   .....+..|++|.|+|+++++++++++|+++..+|...++ +++.
T Consensus       193 ~~~~~~~~~--~~~~~~~---~~~~~~~~~-~---~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~-~~~~  262 (282)
T 3oxh_A          193 MEIAAGQNY--RVLKAGD---AEVGGCMEP-P---MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPS-VGRF  262 (282)
T ss_dssp             C-------C--EEEEETT---EEEEEEECC-S---STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEE
T ss_pred             ccCCCCcce--EEEEcCC---ccEeeecCC-C---CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCC-CeEE
Confidence            421222233  3333321   112222211 1   1123356789999999999999999999999988877753 4678


Q ss_pred             EEEECCCCCEEEEeecCC
Q 016689          231 AFIEDPDGYKFELLERGP  248 (384)
Q Consensus       231 ~~~~DPdG~~iel~~~~~  248 (384)
                      ++++|||||.|||++..+
T Consensus       263 ~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          263 AVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEECTTSCEEEEEEEC-
T ss_pred             EEEECCCCCEEEEEecCC
Confidence            999999999999999864

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.60  E-value=1.1e-14  Score=119.37  Aligned_cols=109  Identities=15%  Similarity=0.077  Sum_probs=83.8

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCH
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDv  332 (384)
                      ..|+.|.|+|++++++||+++|||++...    ...+  ..+..+    ...+.+......    ...+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDDF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSSE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec----CCCE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            46899999999999999999999999754    1223  233332    345555543221    123447999999999


Q ss_pred             HHHHHHHHHC------CC--eEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          333 YKTAEAIKLS------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       333 d~~~~~l~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ++++++++++      |+  ++..+|...++  ++.+||+|||||.|||.+..
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecCC--CCEEEEECCCCCEEEEEEec
Confidence            9999999999      99  88888877776  38899999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.60  E-value=5e-15  Score=121.13  Aligned_cols=112  Identities=14%  Similarity=0.060  Sum_probs=84.5

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |+.+..|+.|.|+|+++++        +||+++|||++...    ...  .+++..+    ...+.+......+   . .
T Consensus         2 ~~~~~~~~~l~v~D~~~a~--------~FY~~~LG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~~---~-~   59 (122)
T 1qto_A            2 VKFLGAVPVLTAVDVPANV--------SFWVDTLGFEKDFG----DRD--FAGVRRG----DIRLHISRTEHQI---V-A   59 (122)
T ss_dssp             CCCCCCCCEEEESSHHHHH--------HHHHHTTCCEEEEE----CSS--EEEEEET----TEEEEEEECSCHH---H-H
T ss_pred             CcccceeEEEEcCCHHHHH--------HHHHhccCcEEeeC----CCC--EEEEEEC----CEEEEEEcCCCCC---C-C
Confidence            4455668999999999999        99999999998754    122  4555543    3355565432211   1 1


Q ss_pred             CceEEEEEECCHHHHHHHHHHc------CC--eeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          191 GFGHFGIAVEDVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       191 g~~hi~~~v~Dv~~~~~~l~~~------G~--~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +..|++|.|+|+++++++|+++      |+  ++..+|...+.|  +.++++|||||.|||.++
T Consensus        60 ~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           60 DNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             CceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            3369999999999999999999      99  888777666543  788999999999999985

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.60  E-value=6.5e-15  Score=124.94  Aligned_cols=118  Identities=19%  Similarity=0.251  Sum_probs=89.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc-----cccCCCceeEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-----EYDKGNGYAQI  325 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-----~~~~g~g~~hi  325 (384)
                      .++.|+.|.|+|++++++||+++|||++....    ..+  .++..+    ...+.+.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            46899999999999999999999999987543    223  333332    3456665422100     11124567899


Q ss_pred             EEEc---CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          326 AIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       326 af~V---dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      +|.|   +|+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++.+.+
T Consensus        74 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             EEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTS
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCc
Confidence            9999   899999999999999998887766654 4899999999999999998764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.60  E-value=2.7e-14  Score=118.83  Aligned_cols=120  Identities=12%  Similarity=0.098  Sum_probs=84.1

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .++-.+..|.|+|+++++        +||+++|||++.....  .    .+++..+    ...+.+...........+.+
T Consensus         5 ~~~~~~~~l~v~D~~~a~--------~FY~~~LG~~~~~~~~--~----~~~l~~~----~~~l~l~~~~~~~~~~~~~~   66 (134)
T 3fcd_A            5 DIHQITPFLHIPDMQEAL--------TLFCDTLGFELKYRHS--N----YAYLELS----GCGLRLLEEPARKIIPDGIA   66 (134)
T ss_dssp             -CCEEEEEEEESCHHHHH--------HHHTTTTCCEEEEEET--T----EEEEEET----TEEEEEEECCCC--------
T ss_pred             hhhcceeEEEECCHHHHH--------HHHHhccCcEEEEeCC--C----eEEEEEC----CEEEEEEeCCCCCcCCCCCc
Confidence            346677899999999999        9999999999976532  1    4566654    34566655433221112224


Q ss_pred             ceEEEEEECCHHHHHHHHHHcC----CeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCC
Q 016689          192 FGHFGIAVEDVAKTVDLVKAKG----GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  250 (384)
Q Consensus       192 ~~hi~~~v~Dv~~~~~~l~~~G----~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  250 (384)
                      ..|++|.|+|+++++++|+++|    +++..+|...+ .+.+.++++|||||.|||.+.....
T Consensus        67 ~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           67 RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMP-YGQREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             -EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECT-TSEEEEEEECTTSCEEEEEEECCTT
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccC-CCcEEEEEECCCCCEEEEEEccccc
Confidence            4699999999999999999665    45565665554 3557889999999999999987653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.59  E-value=9.8e-15  Score=124.05  Aligned_cols=117  Identities=12%  Similarity=0.106  Sum_probs=84.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCcc-ccCCCceeEEEEEc
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGT  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~-~~~g~g~~hiaf~V  329 (384)
                      .++.||.|.|.|++++++||+++|||++....    ..+..  +..++   +..+.+.......+ .....+..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~~~~~--~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS----PTFAM--FVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEEC----SSEEE--EECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccC----CCEEE--EEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            36899999999999999999999999987543    12333  33211   34555543222111 12234668999999


Q ss_pred             CC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          330 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       330 dD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +|   +++++++|+++|+++..+|...++  ++.+||+|||||.|||++...
T Consensus        76 ~d~~dvd~~~~~l~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           76 NSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHHHhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcCh
Confidence            87   999999999999999888877777  488999999999999999763

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.59  E-value=6.3e-15  Score=119.34  Aligned_cols=111  Identities=16%  Similarity=0.134  Sum_probs=83.0

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      .+ |+.|.|+|++++++||+++|||++....    +.+.  .+..+. .....+.+.....     ...+..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~~~--~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----GWIV--THASPL-EAHAQVSFAREGG-----SGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SSEE--EEEEEE-EEEEEEEEESSSB-----TTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CEEE--EEecCC-CCcEEEEEEcCCC-----CCCceeEEEEEECC
Confidence            46 9999999999999999999999987531    2222  222211 0123455543211     23456799999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +++++++++++|+++..+|...+++ .+.+||+|||||.|||++.
T Consensus        75 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            9999999999999988877766654 4889999999999999985

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.58  E-value=2e-14  Score=120.32  Aligned_cols=117  Identities=15%  Similarity=0.156  Sum_probs=84.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEecc-----CCC-cc-ccCCCceeE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-----HGV-TE-YDKGNGYAQ  324 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~-----~~~-~~-~~~g~g~~h  324 (384)
                      ++.|+.|.|+|++++++||+++|||++..+..  ...+.  .+..+    ...+.+...     ... .. ...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~--~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIFR--GLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTEE--EEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCceE--EeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            68999999999999999999999999864432  12232  23322    233444221     010 01 112345 59


Q ss_pred             EEEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          325 IAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       325 iaf~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ++|.|+   |+++++++|+++|+++..+|...+++ ++.+||+|||||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEccc
Confidence            999998   59999999999999998888766654 589999999999999998764

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.58  E-value=2.6e-14  Score=121.33  Aligned_cols=114  Identities=19%  Similarity=0.307  Sum_probs=83.1

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCc--------ceEEEEeccCCCccccCCCce
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK--------NAVLELTYNHGVTEYDKGNGY  322 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~lel~~~~~~~~~~~g~g~  322 (384)
                      .++.|+.|.|.|++++++||+++|||++...   ++..+.++..+  ....        .....+...      ....+ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~~~~~--~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSMVTTG--PVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEEEECS--CBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEEEEeC--CcceeecccCCcccccceeec------CCCCe-
Confidence            4799999999999999999999999998752   12334333332  2100        011122111      11134 


Q ss_pred             eEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          323 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       323 ~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|++|.|+|+++++++|+++|+++..+|.+.++. ++.+||+|||||.|||++..
T Consensus        92 ~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            4999999999999999999999998887666631 48999999999999999865

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.58  E-value=3.5e-14  Score=120.11  Aligned_cols=119  Identities=21%  Similarity=0.293  Sum_probs=87.6

Q ss_pred             CCCCCceeeeeecCChHHHHHHH---HHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC---Ccccc-CCC
Q 016689          248 PTPEPLCQVMLRVGDLDRAINFY---KKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG---VTEYD-KGN  320 (384)
Q Consensus       248 ~~~~~~~hV~L~V~Dle~s~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~---~~~~~-~g~  320 (384)
                      +....+.|+.|.|.|++++++||   +++|||++......    .. .++. +    ...+.+.....   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~----~~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR----GK-SYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT----EE-EEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC----Cc-eEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            34568999999999999999999   99999998765421    11 2333 2    34566655332   11111 235


Q ss_pred             ceeEEEEEcC---CHHHHHHHHHHCCCeEec-CCccCCCC-CceEEEEECCCCCeEEEEec
Q 016689          321 GYAQIAIGTD---DVYKTAEAIKLSGGKITR-EPGPLPGI-NTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       321 g~~hiaf~Vd---Dvd~~~~~l~~~G~~i~~-~p~~~~~~-~~~~~~~~DPdG~~iElve~  376 (384)
                      +..|++|.|+   |+++++++++++|+++.. +|.+.+.+ ..+.+||+|||||.|||+++
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            7789999998   999999999999999887 46554432 24789999999999999864

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.58  E-value=7.1e-15  Score=126.32  Aligned_cols=119  Identities=17%  Similarity=0.158  Sum_probs=86.2

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC--------ccccCCCce
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--------TEYDKGNGY  322 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~--------~~~~~g~g~  322 (384)
                      .++.||.|.|+|++++++||+++|||++..+...   ..  .++..+    ...+.+......        .+...+.+.
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~--~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g~   77 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QL--VFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVGQ   77 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TE--EEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cE--EEEeCC----CEEEEEEecCCccCccccCCCCcCCCcce
Confidence            5799999999999999999999999999765431   12  233322    233444321110        011223467


Q ss_pred             eEEEEEc---CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccc
Q 016689          323 AQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  380 (384)
Q Consensus       323 ~hiaf~V---dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~  380 (384)
                      .|++|.|   +|+++++++|+++|+++..++.. +++ ++.+||+|||||.|||++++.+.
T Consensus        78 ~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g-~~~~~~~DPdG~~iel~~~~~~~  136 (160)
T 3r4q_A           78 GHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNG-SYSVYIRDPAGNSVEVGEGKLWG  136 (160)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTS-CEEEEEECTTCCEEEEEEGGGGT
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCC-cEEEEEECCCCCEEEEEeCCCCC
Confidence            9999999   89999999999999998755432 333 58999999999999999987654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.58  E-value=3.4e-14  Score=120.21  Aligned_cols=116  Identities=20%  Similarity=0.166  Sum_probs=79.4

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEE-ecc-----CCC-ccccCCCce
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL-TYN-----HGV-TEYDKGNGY  322 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel-~~~-----~~~-~~~~~g~g~  322 (384)
                      ..++.||.|.|+|+++|++||++ +|+........  ..........     ...+.+ ...     ... .....+.+.
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTD--ESCACMVVSE-----QAFVMLIDRARFADFTSKPIADATATTE   78 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCB--TTEEEEEEET-----TEEEEEEEHHHHGGGCSSCBCCTTTCBS
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecC--CceeEEeecC-----cceEeeeccccccccccccCCCCCCCCe
Confidence            46899999999999999999988 55555433322  2222222221     122222 110     000 011223455


Q ss_pred             eEEEEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          323 AQIAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       323 ~hiaf~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      .|++|.|+   ++++++++++++|+++..+|.+.++  ++.+||+|||||.|||+.
T Consensus        79 ~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           79 AIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            79999995   5888999999999999999887666  588999999999999986

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.57  E-value=4.2e-14  Score=119.62  Aligned_cols=120  Identities=19%  Similarity=0.185  Sum_probs=81.0

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEec-------CCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-------YGVD  184 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~-------~~~~  184 (384)
                      ..||.||.|.|+|+++|+        +||++ ||+.......  ++.. ..+...+    ...+.+...       ....
T Consensus         7 ~~rl~~V~L~V~Dl~~s~--------~FY~~-lg~~~~~~~~--~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~   70 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQ--------AFFGT-LGFEFNPKFT--DESC-ACMVVSE----QAFVMLIDRARFADFTSKPI   70 (149)
T ss_dssp             CCCCEEEEEEESCHHHHH--------HHHHH-TTCEECGGGC--BTTE-EEEEEET----TEEEEEEEHHHHGGGCSSCB
T ss_pred             CccEEEEEEEeCCHHHHH--------HHHHH-hCCCcceeec--CCce-eEEeecC----cceEeeeccccccccccccC
Confidence            458999999999999999        99988 5555543322  2222 2222221    112222210       0111


Q ss_pred             CCcCCCCceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          185 KYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       185 ~~~~g~g~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      ....+.+..|++|.|+   |+++++++++++|+++..+|.+..  .++.+||+|||||+|||+...+.
T Consensus        71 ~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~--~~~~~~f~DPDGn~iEi~~~~p~  136 (149)
T 4gym_A           71 ADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYG--FMYGRSFHDLDGHLWEVMWMSAE  136 (149)
T ss_dssp             CCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECS--SEEEEEEECTTCCEEEEEEECTT
T ss_pred             CCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccC--CEEEEEEEcCCCCEEEEEEEChh
Confidence            1223346679999996   478899999999999998887654  46789999999999999976553

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.57  E-value=3.6e-14  Score=116.54  Aligned_cols=111  Identities=21%  Similarity=0.277  Sum_probs=83.4

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCH
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDv  332 (384)
                      ..++.|.|+|++++++||++ |||++..+    +..+  ..+..+    ...+.+....+.   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            35789999999999999998 99998754    1223  334432    345566543221   1124668999999999


Q ss_pred             HHHHHHHHHCCCeE-------ecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          333 YKTAEAIKLSGGKI-------TREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       333 d~~~~~l~~~G~~i-------~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ++++++++++|+++       ..+|...+++ .+.++|+|||||.|||++...
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchh
Confidence            99999999999994       6667666654 388999999999999999764

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.57  E-value=6.9e-14  Score=114.84  Aligned_cols=112  Identities=21%  Similarity=0.272  Sum_probs=84.1

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      ...|+.|.|+|+++++        +||++ |||++...    +..  .+++..+    ...+++.......   ...+..
T Consensus         3 ~~~~~~l~v~D~~~a~--------~FY~~-LG~~~~~~----~~~--~~~~~~~----~~~l~l~~~~~~~---~~~~~~   60 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTA--------AFYER-LGFGIVFR----DAG--WMILQRG----DLMLEFFAHPGLD---PLASWF   60 (126)
T ss_dssp             CEEEEEEEESCHHHHH--------HHHHT-TTCEEEEE----CSS--EEEEEET----TEEEEEEECTTCC---GGGCCC
T ss_pred             ccEEEEEEeCCHHHHH--------HHHHH-CCCEEEec----CCC--EEEEEeC----CEEEEEEeCCCCC---CCCcce
Confidence            4578999999999999        99998 99998754    122  4555554    3356665432211   224678


Q ss_pred             EEEEEECCHHHHHHHHHHcCCee-------eeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~-------~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      |++|.|+|+++++++|+++|+++       ..+|...+. +.+.++++|||||.|||.+...
T Consensus        61 ~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           61 SCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchh
Confidence            99999999999999999999994       556655543 3467899999999999999764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.57  E-value=1.9e-14  Score=119.76  Aligned_cols=115  Identities=17%  Similarity=0.200  Sum_probs=80.4

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCH
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDv  332 (384)
                      -.+..|.|.|++++++||+++|||++..+..    .+  .++..+    ...+.+.........+...+..|++|.|+|+
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv   77 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCDTLGFELKYRHS----NY--AYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSDI   77 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET----TEEEEEEECCCC---------EEEEEECSCH
T ss_pred             cceeEEEECCHHHHHHHHHhccCcEEEEeCC----Ce--EEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCCH
Confidence            4567899999999999999999999976532    23  333332    3456665543321122223457999999999


Q ss_pred             HHHHHHHHHC----CCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          333 YKTAEAIKLS----GGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       333 d~~~~~l~~~----G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ++++++++++    |+++..+|...+++ .+.++|+|||||.|||.+...
T Consensus        78 ~~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           78 DSLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEccc
Confidence            9999999855    45566666666664 488999999999999999653

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.57  E-value=1.9e-14  Score=117.65  Aligned_cols=108  Identities=18%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             ceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCH
Q 016689          253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  332 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDv  332 (384)
                      ..++.|.|+|++++++||+++|||++...    +..+  ..+..+    ...+.+......   . ..+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRDF--AGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSSE--EEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCCE--EEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCH
Confidence            35789999999999999999999998754    1223  333332    345566543221   1 12336999999999


Q ss_pred             HHHHHHHHHC------CC--eEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          333 YKTAEAIKLS------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       333 d~~~~~l~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      ++++++++++      |+  ++..+|...++  ++.++|+|||||.|||.++
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPA--GREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETT--EEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCC--CcEEEEECCCCCEEEEecC
Confidence            9999999999      99  88888877676  4789999999999999985

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.57  E-value=1.5e-14  Score=120.62  Aligned_cols=117  Identities=19%  Similarity=0.153  Sum_probs=86.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC-----Cc-cccCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG-----VT-EYDKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~-----~~-~~~~g~g~~hi  325 (384)
                      ++.|+.|.|.|++++++||++ |||++..+..  ...+..  +..+.   ...+.+.....     .. ....+.+..|+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l   75 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   75 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcCC---CeEEEEecCccchhhCcccCCCCCCCeEEE
Confidence            589999999999999999998 9999875432  222322  22211   34555543110     00 11234577899


Q ss_pred             EEEcC---CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~Vd---Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|+   |+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        76 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           76 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            99999   99999999999999998887766664 47899999999999999866

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.57  E-value=5.9e-14  Score=116.60  Aligned_cols=110  Identities=24%  Similarity=0.289  Sum_probs=83.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      +++||.|.|+|++++++||+++|||++.....  +  .  .++..+    ...+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C--c--eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            57899999999999999999999999875532  1  1  223332    334566543221  123457789999997 


Q ss_pred             -CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 -Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       |+++++++++++|+++..++..  +  ++.+||+|||||.|||++..
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           72 ADFARFAAQLRAHGVREWKQNRS--E--GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCS--S--SCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHHHHHHHCCCceecCCCC--C--eEEEEEECCCCCEEEEEECC
Confidence             9999999999999999876643  3  57899999999999999865

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.56  E-value=1.4e-13  Score=124.46  Aligned_cols=207  Identities=14%  Similarity=0.095  Sum_probs=137.1

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ....+.+|+|.|+++++        +||+++|||+++....      ..+.++.+.  ....+.+-..+... .....|+
T Consensus         9 ~~~~~p~LrV~nr~~~~--------~FY~~vlG~kll~ee~------~~a~lg~~~--~~~~L~lEEsp~~~-~~~~~Gl   71 (244)
T 3e0r_A            9 IVRIIPTLKANNRKLNE--------TFYIETLGMKALLEES------AFLSLGDQT--GLEKLVLEEAPSMR-TRKVEGR   71 (244)
T ss_dssp             EEEEEEEEEESSHHHHH--------HHHTTTTCCEEEEECS------SEEEEECTT--CCEEEEEEECCTTT-CBCCCSS
T ss_pred             eEEEeeEEEECCHHHHH--------HHHHhccCcEEeeccC------cEEEeecCC--CcceEEEEeCCCcc-ccccccc
Confidence            35677999999999999        9999999999986543      367777532  23334443322211 1234678


Q ss_pred             eEE---EEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC---------C----------
Q 016689          193 GHF---GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------P----------  250 (384)
Q Consensus       193 ~hi---~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~---------~----------  250 (384)
                      .|+   +|.|++-+++..-|.. +..+..   ...+..++.+|+.||+||.||++...+.         +          
T Consensus        72 kh~a~i~i~vp~~~el~~lL~~-~~~~~~---~~~gdhgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~g  147 (244)
T 3e0r_A           72 KKLARLIVKVENPLEIEGILSK-TDSIHR---LYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASIS  147 (244)
T ss_dssp             CSEEEEEEEESSHHHHHHHHTT-CSCCSE---EEECSSSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCC
T ss_pred             ceeeeEEEEcCCHHHHHHHHhc-cccccc---ccccCCcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccC
Confidence            887   5999998887666555 554421   1223455679999999999999865531         1          


Q ss_pred             ---CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCC-ccccCCCceeEEE
Q 016689          251 ---EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV-TEYDKGNGYAQIA  326 (384)
Q Consensus       251 ---~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~~~~~g~g~~hia  326 (384)
                         ..+ ||.|.|.|.+++  ||++ +|+..           .+.+....            ..+. .+....-|+..+-
T Consensus       148 Ls~fti-~I~LnV~d~~~s--Fy~~-~~~~~-----------~~~F~~a~------------G~dl~~~~~~t~gLe~l~  200 (244)
T 3e0r_A          148 LSKFEI-SMELHLPTDIES--FLES-SEIGA-----------SLDFIPAQ------------GQDLTVDNTVTWDLSMLK  200 (244)
T ss_dssp             CSSEEE-EEEEEECTTCCC--SCCH-HHHTT-----------TEEEEECC------------CTTTTCCTTSBSSEEEEE
T ss_pred             CCCcEE-EEEEEcCchHHH--Hhhc-cCCcc-----------cEEEEccc------------CCCCCCCCCCccCceEEE
Confidence               137 999999999998  9976 44411           12222211            1111 1122334778888


Q ss_pred             EEcC--CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          327 IGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       327 f~Vd--Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      |.|+  |+.++.+++++.|.-+..       . .+++.+.||+|+.|.|.+
T Consensus       201 ~~v~~~dl~~l~~~L~~~g~~idk-------k-~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          201 FLVNELDIASLRQKFESTEYFIPK-------S-EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             EEESSCCHHHHHHHTTTSCEECCT-------T-CCEEEEECTTSCEEEEEE
T ss_pred             EEeCHHHHHHHHHHHHhCCceEcc-------c-CCEEEEECCCCCEEEEEE
Confidence            8884  588899999988763321       1 468899999999999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.56  E-value=2.2e-14  Score=115.08  Aligned_cols=107  Identities=21%  Similarity=0.236  Sum_probs=80.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc--
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V--  329 (384)
                      +++|+.|.|+|++++++||+++|||++....   +..+  .++..+.   +..+.+......    ..++..|++|.|  
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~~   70 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT---CCEEEEEECSSC----CCCTTCCEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcCC
Confidence            6899999999999999999999999987543   1223  3343322   345666543221    135678999999  


Q ss_pred             -CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          330 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       330 -dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                       +|+++++++++++|+++. +|.. ++  ++.+||+|||||.|||+
T Consensus        71 ~~d~~~~~~~l~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           71 EEQVDKINQRLKEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence             899999999999999975 4543 33  58999999999999996

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.56  E-value=8e-14  Score=115.47  Aligned_cols=117  Identities=15%  Similarity=0.144  Sum_probs=82.9

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      +.+++||.|.|+|++++++||+++|||++.....    .+  ..+....    ..+.+........ +...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g----~~~~l~~~~~~~~-~~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFG----DQLVCHLSDRWDR-EVSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETT----EEEEEEECSCSCS-SCCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeC----CEEEEEEcCcccc-cCCCCCCeEEEEE
Confidence            4579999999999999999999999999965432    12  2333211    1233322111111 1234567999988


Q ss_pred             C---CHHHHHHHHHHCCCeEecCCccC----CCCCceEEEEECCCCCeEEEEecCc
Q 016689          330 D---DVYKTAEAIKLSGGKITREPGPL----PGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       330 d---Dvd~~~~~l~~~G~~i~~~p~~~----~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +   |+++++++|+++|+++..+|...    ++ ..+.+||+|||||.|||.+..+
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~-~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIE-EHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTT-CEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCC-ceEEEEEECCCCCEEEEEEECC
Confidence            5   59999999999999988776543    22 2478999999999999998764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.55  E-value=4.6e-14  Score=119.31  Aligned_cols=115  Identities=18%  Similarity=0.244  Sum_probs=81.6

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCC---CccccCCCceeEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG---VTEYDKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~---~~~~~~g~g~~hiaf  327 (384)
                      .+++||.|.|+|++++++||+++|||++....   + ....  +..+    ...+.+.....   ........+..|++|
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~~~--l~~g----~~~l~l~~~~~~~~~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DRKA--LCFG----DQKFNLHEVGKEFEPKAAHPVPGSLDICL   95 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TEEE--EEET----TEEEEEEETTSCCSSCCSSCCTTCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-CceE--EEEC----CcEEEEEEcCCCcCcccCCCCCCCceEEE
Confidence            47999999999999999999999999997432   1 1222  2222    22444433111   111123456788999


Q ss_pred             EcC-CHHHHHHHHHHCCCeEecCCccCCCC--CceEEEEECCCCCeEEEEe
Q 016689          328 GTD-DVYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       328 ~Vd-Dvd~~~~~l~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iElve  375 (384)
                      .++ |+++++++|+++|+++..+|...++.  ..+.+||+|||||.|||.+
T Consensus        96 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           96 ITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            885 99999999999999988666543322  2368999999999999986

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.55  E-value=7.1e-14  Score=117.68  Aligned_cols=117  Identities=16%  Similarity=0.208  Sum_probs=81.4

Q ss_pred             eEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecC---C-----CCCCc
Q 016689          116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY---G-----VDKYD  187 (384)
Q Consensus       116 ~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~---~-----~~~~~  187 (384)
                      ..+.|.|+|+++++        +||+++|||++......  ..  .+++..+    ...+.|....   .     .....
T Consensus         7 ~~~~l~v~Dl~~s~--------~FY~~~LG~~~~~~~~~--~~--~~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~   70 (145)
T 2rk9_A            7 VVPELYCFDINVSQ--------SFFVDVLGFEVKYERPD--EE--FVYLTLD----GVDVMLEGIAGKSRKWLSGDLEFP   70 (145)
T ss_dssp             EEEEEEESSHHHHH--------HHHHHTTCCEEEEEEGG--GT--EEEEEET----TEEEEEEEC-----------CCSS
T ss_pred             ceEEEEECCHHHHH--------HHHHhccCCEEEeecCC--CC--EEEEEcC----CeEEEEEeccCCCcccccCccccC
Confidence            56899999999999        99999999998753321  22  3556543    2344554321   1     11112


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHH-cCCeeeeCCccc------cCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~-~G~~~~~~p~~~------~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .+.|+. ++|.|+|+++++++|++ +|+++..+|...      ..++.+.++|+|||||.|||++....
T Consensus        71 ~~~g~~-~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           71 LGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             TTTTEE-EEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             CCCceE-EEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            335665 99999999999999999 999988776542      12345678899999999999987543

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.55  E-value=9.2e-14  Score=116.30  Aligned_cols=112  Identities=21%  Similarity=0.315  Sum_probs=84.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc-cccCCCceeEEEEEcC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EYDKGNGYAQIAIGTD  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~-~~~~g~g~~hiaf~Vd  330 (384)
                      +++||.|.|.|++++++||+++|||++.....  .  .  .++..+    ...+.+....... ......+..|++|.|+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~   73 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTVA   73 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEECC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEeC
Confidence            58999999999999999999999999876542  1  2  223332    2345555432111 1123457789999996


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        |+++++++++++|+++..+|.  ++  ++.+||+|||||.|||++..
T Consensus        74 ~~d~~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           74 EEDFEPLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEeccCC--Cc--eeEEEEECCCCCEEEEEECc
Confidence              999999999999999887654  23  58899999999999999865

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.53  E-value=1.7e-14  Score=120.52  Aligned_cols=116  Identities=16%  Similarity=0.153  Sum_probs=83.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEE-----Ee--c-CCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL-----TY--N-YGV  183 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel-----~~--~-~~~  183 (384)
                      .+++.|+.|.|+|+++++        +||+++|||++....  +  .  .+.+..     ...+..     ..  . ...
T Consensus         6 ~~~l~~v~l~v~D~~~a~--------~FY~~~LG~~~~~~~--~--~--~~~~~~-----g~~l~~~~~~~~~~~~~~~~   66 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSK--------SFYRDRLGLKILEDF--G--S--FVLFET-----GFAIHEGRSLEETIWRTSSD   66 (141)
T ss_dssp             SCCCCCCCCEESCHHHHH--------HHHHHTTCCCEEEEC--S--S--EEEETT-----SCEEEEHHHHHHHHHSCCC-
T ss_pred             ccccceEEEEECCHHHHH--------HHHHHhcCCEEEEEc--C--C--cEEEec-----cceeccCchhhhhccccCCc
Confidence            468999999999999999        999999999987542  1  1  223331     122321     11  0 111


Q ss_pred             CCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          184 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       184 ~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .....+.+..|++|.|+|+++++++|++ |+++..+|...+. +.+.++++|||||.|||.+..+
T Consensus        67 ~~~~~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           67 AQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             -CCCSCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             cccccCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            1122345788999999999999999999 9998877766653 4568899999999999999764

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.52  E-value=3.4e-14  Score=118.64  Aligned_cols=114  Identities=14%  Similarity=0.179  Sum_probs=83.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEE-----ec--c-CCCccccCCCce
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL-----TY--N-HGVTEYDKGNGY  322 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel-----~~--~-~~~~~~~~g~g~  322 (384)
                      .++.|+.|.|+|++++++||+++|||++....  +  .+  ..+..     +..+..     ..  + ........+.+.
T Consensus         7 ~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~   75 (141)
T 2qnt_A            7 MRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF--VLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRRN   75 (141)
T ss_dssp             CCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE--EEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCSS
T ss_pred             cccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc--EEEec-----cceeccCchhhhhccccCCccccccCCCc
Confidence            47899999999999999999999999987542  1  12  22221     122321     01  0 111112234577


Q ss_pred             eEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          323 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       323 ~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      .|++|.|+|++++++++++ |+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 99998888777764 38899999999999999975

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.51  E-value=1.1e-13  Score=116.99  Aligned_cols=114  Identities=12%  Similarity=0.124  Sum_probs=78.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeee-ecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccC-CCce-------
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRK-RDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK-GNGY-------  322 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~-g~g~-------  322 (384)
                      ++.|+.|.|+|++++++||+++|||++... ...++  +.+  ++      . .+.+........... ....       
T Consensus        21 ~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~--~g------~-~l~l~~~~~~~~~~~~~~~~~~~g~~~   89 (148)
T 3bt3_A           21 RENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD--YG------C-VFDYPSEVAVAHLTPFRGFHLFKGEPI   89 (148)
T ss_dssp             EECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE--EE------E-EESSCTTTTSCC--CCCSEEEEESCCC
T ss_pred             EeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE--Ec------c-EEEEeccCCCcccccccccceeeccCC
Confidence            589999999999999999999999998532 22222  222  22      1 133311110001110 0111       


Q ss_pred             -eEEEE-EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          323 -AQIAI-GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       323 -~hiaf-~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       ++.+| .|+|+++++++++++|+++..+|...+++ .+.+||+|||||.|||+++.
T Consensus        90 ~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           90 KGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG-ARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeeec
Confidence             22265 99999999999999999998888777754 47899999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.51  E-value=1.5e-13  Score=115.73  Aligned_cols=114  Identities=15%  Similarity=0.179  Sum_probs=78.7

Q ss_pred             eeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccC---C-----CccccCCCceeEE
Q 016689          254 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH---G-----VTEYDKGNGYAQI  325 (384)
Q Consensus       254 ~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~---~-----~~~~~~g~g~~hi  325 (384)
                      ..+.|.|.|+++|++||+++|||++......  ..+.  ++..+    ...+.+....   .     ....+.+.+. ++
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~~--~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEFV--YLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NF   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTEE--EEEET----TEEEEEEEC-----------CCSSTTTTE-EE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCEE--EEEcC----CeEEEEEeccCCCcccccCccccCCCCce-EE
Confidence            4578999999999999999999998743221  1232  33332    2344444321   1     0011223455 49


Q ss_pred             EEEcCCHHHHHHHHHH-CCCeEecCCcc-------CCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDDVYKTAEAIKL-SGGKITREPGP-------LPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdDvd~~~~~l~~-~G~~i~~~p~~-------~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|+|+++++++|++ +|+++..+|..       .+.+ ++.++|+|||||.|||++..
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~-~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIAT-QKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCE-EEEEEEECTTCCEEEEEEC-
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCc-ceEEEEECCCCCEEEEEEcC
Confidence            9999999999999999 99998877654       2222 47899999999999999865

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.50  E-value=1.9e-13  Score=115.56  Aligned_cols=116  Identities=19%  Similarity=0.140  Sum_probs=79.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+++.|+.|.|+|+++++        +||+++|||++....... ..+..  +  |    . .+.+... ..........
T Consensus        19 ~~~~~hv~l~v~D~~~a~--------~FY~~~LG~~~~~~~~~~-~~~~~--~--g----~-~l~l~~~-~~~~~~~~~~   79 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTV--------KWFEEILGWSGDIVARDD-EGFGD--Y--G----C-VFDYPSE-VAVAHLTPFR   79 (148)
T ss_dssp             EEEECCCEEEESCHHHHH--------HHHHHTTCCEEEEEEECT-TSCEE--E--E----E-EESSCTT-TTSCC--CCC
T ss_pred             eEEeeeEEEEECCHHHHH--------HHHHhccCCEEEeeeecC-CCccE--E--c----c-EEEEecc-CCCccccccc
Confidence            468999999999999999        999999999986421111 12222  2  2    1 1333111 1111101001


Q ss_pred             ceEE----------EE-EECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHF----------GI-AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi----------~~-~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ..|+          ++ .|+|+++++++|+++|+++..+|...++ +.+.+|++|||||.|||.+..
T Consensus        80 ~~~~~~g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           80 GFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SEEEEESCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             ccceeeccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            2222          55 8999999999999999999888866653 467889999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.41  E-value=3e-12  Score=110.85  Aligned_cols=120  Identities=13%  Similarity=0.112  Sum_probs=80.1

Q ss_pred             ceeeEEEEEeCC--HHHHHhhcCCChhHHhhhccCCEEEeeee-------CCCCceEEEEEeeCCCCccEEEEEEecCCC
Q 016689          113 RRMLHVVYRVGD--LDKTINSLGCGYCRFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGV  183 (384)
Q Consensus       113 ~~i~Hv~l~V~D--l~~a~~~~~~~~~~FY~~~LG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~  183 (384)
                      .+-.++.|.|.|  +++|+        +||+++|||++.....       .+.+....+.+..+    ...+.+......
T Consensus        23 ~~~i~~~L~v~D~~~~~A~--------~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~   90 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAV--------TFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSL   90 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHH--------HHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGS
T ss_pred             CceEEEEEEECCcCHHHHH--------HHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcc
Confidence            356789999999  99999        9999999999864331       11122223334443    223334322111


Q ss_pred             -C-CCcC--CCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecCC
Q 016689          184 -D-KYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       184 -~-~~~~--g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                       . +...  +.++ |++|.|+|+++++++|+++|++ ..+|...  ++  .+.++++||+||.|+|.+..+
T Consensus        91 ~~~~~~~~~~~g~-~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A           91 PGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             TTCCCCCTTSCCC-EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             cCCccccCCCCcE-EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence             0 1111  3343 8999999999999999999999 8888776  54  678899999999999998754

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.40  E-value=2.4e-12  Score=111.49  Aligned_cols=118  Identities=17%  Similarity=0.114  Sum_probs=78.4

Q ss_pred             ceeeeeecCC--hHHHHHHHHHhhCCeEeeeec-------CCCCcEEEEEeecCCCCcceEEEEeccCCC-c-cccCC-C
Q 016689          253 LCQVMLRVGD--LDRAINFYKKAFGMELLRKRD-------NPDYKYTIAVMGYGPEDKNAVLELTYNHGV-T-EYDKG-N  320 (384)
Q Consensus       253 ~~hV~L~V~D--le~s~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~lel~~~~~~-~-~~~~g-~  320 (384)
                      -.++.|.|.|  +++|++||+++|||++.....       .+...+....+..+    ...+.+...... . +...+ .
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCC
Confidence            4678899999  999999999999999875331       11112222223322    223333321100 0 01110 2


Q ss_pred             ceeEEEEEcCCHHHHHHHHHHCCCeEecCCccC--CCCCceEEEEECCCCCeEEEEecC
Q 016689          321 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       321 g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ..+|++|.|+|+++++++|+++|++ +.+|...  ++  ++.++|+||+||.|+|++..
T Consensus       101 ~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC--
T ss_pred             CcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeec
Confidence            2359999999999999999999999 9888877  66  58999999999999999865

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.36  E-value=3.7e-11  Score=102.00  Aligned_cols=124  Identities=16%  Similarity=0.185  Sum_probs=82.0

Q ss_pred             cceeeEEEEEeC-CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC------------CceEEEEEeeCCCCccEEEEEE
Q 016689          112 KRRMLHVVYRVG-DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE------------DRYTNAFLGYGPEDSHFVVELT  178 (384)
Q Consensus       112 ~~~i~Hv~l~V~-Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~lel~  178 (384)
                      .+++ +..|.|. |+++|+        +||+++||+++.....+.+            +....+-+..+    ...+.+.
T Consensus         2 ~m~~-~p~L~v~~d~~~A~--------~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~   68 (149)
T 1u6l_A            2 SLQI-VPYLIFNGNCREAF--------SCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMAS   68 (149)
T ss_dssp             CCEE-EEEEEESSCHHHHH--------HHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEE
T ss_pred             cceE-EEEEEECCCHHHHH--------HHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEE
Confidence            3454 4889998 999999        9999999999875432211            22223334433    1223232


Q ss_pred             ecCCCC-CCcCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCC
Q 016689          179 YNYGVD-KYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  252 (384)
Q Consensus       179 ~~~~~~-~~~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~  252 (384)
                      ... +. ......| .+++|.|+|   +++++++|+ +|+++..+|.+.++ +.+.++++||+|+.|+|.+..+..+.
T Consensus        69 d~~-~~~~~~~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~~~~~  142 (149)
T 1u6l_A           69 DNH-PAYPYEGIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQDREGG  142 (149)
T ss_dssp             ECC-TTSCCCCCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC----
T ss_pred             cCC-CccCCCCCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecccCCC
Confidence            221 11 1112234 479999999   789999985 89999988887764 45788899999999999997665443

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.35  E-value=4.6e-12  Score=122.97  Aligned_cols=128  Identities=18%  Similarity=0.291  Sum_probs=92.0

Q ss_pred             cccceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeC--CCCceEEEEEeeCCCCccEEEEEEecCCCC-
Q 016689          110 SDKRRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVD-  184 (384)
Q Consensus       110 ~~~~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-  184 (384)
                      .+.++++|+++.|+  |+++++        +||+++|||++.+..+.  +......+|+..+.  ....+++....... 
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~--------~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~  223 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTV--------EYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNAD  223 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHH--------HHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSB
T ss_pred             CCcceEeEEEEEEchhhHHHHH--------HHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCC
Confidence            35679999999999  999999        99999999998765422  22223456666432  24466665432211 


Q ss_pred             C--------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCcccc---------CCC-------EEEEEEECCCCCE
Q 016689          185 K--------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK---------GGN-------TVIAFIEDPDGYK  240 (384)
Q Consensus       185 ~--------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~---------~g~-------~~~~~~~DPdG~~  240 (384)
                      .        ...+.|+.|++|.|+|+++++++|+++|+++...|....         .+.       ..++|++||||++
T Consensus       224 ~~~~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~l  303 (357)
T 2r5v_A          224 PGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQL  303 (357)
T ss_dssp             CCHHHHHHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEE
T ss_pred             CchhHHHHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceE
Confidence            1        013569999999999999999999999999887763321         001       1268899999999


Q ss_pred             EEEeecC
Q 016689          241 FELLERG  247 (384)
Q Consensus       241 iel~~~~  247 (384)
                      |||++..
T Consensus       304 lqi~t~~  310 (357)
T 2r5v_A          304 FQIFTAS  310 (357)
T ss_dssp             EEEEBCC
T ss_pred             EEEEccC
Confidence            9999853

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.34  E-value=6.2e-11  Score=111.09  Aligned_cols=169  Identities=10%  Similarity=0.041  Sum_probs=105.4

Q ss_pred             CceEEEEEEC-CHHHHHHHHHHcCCeeeeCCccc--cCCCEEEEEEECCCCCEEEEeecCC---CCCCceeeeeecCChH
Q 016689          191 GFGHFGIAVE-DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLD  264 (384)
Q Consensus       191 g~~hi~~~v~-Dv~~~~~~l~~~G~~~~~~p~~~--~~g~~~~~~~~DPdG~~iel~~~~~---~~~~~~hV~L~V~Dle  264 (384)
                      |+..+.+.|. +-.+...-+++.|.+....-...  ..|.         |-..+++....-   .+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            5566666654 34455677788898765421110  1111         112333333221   1223567889999999


Q ss_pred             HHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-CHHHHHHHHHHCC
Q 016689          265 RAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-DVYKTAEAIKLSG  343 (384)
Q Consensus       265 ~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-Dvd~~~~~l~~~G  343 (384)
                      +|++||+++|||++......+ +.+.  .+..+.......+.+....    ...+....+++|.|+ |+++++++++++|
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~dvd~~~~~~~~~G  268 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAVP----GPGPVEPVRLHLDAAGTADSLHRRAVDAG  268 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEECC----CSSCCCCCEEEEEEESCHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccCC----CcCCCCceEEEEEcCccHHHHHHHHHHcC
Confidence            999999999999987433222 1222  3333221111222221111    011223468999998 9999999999999


Q ss_pred             CeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          344 GKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       344 ~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +++..+|...+++ .+.++|+|||||.|+|.++
T Consensus       269 ~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          269 ARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             CccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            9999888777764 4789999999999999885

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.31  E-value=5.7e-11  Score=100.85  Aligned_cols=116  Identities=20%  Similarity=0.168  Sum_probs=79.0

Q ss_pred             eeeeecC-ChHHHHHHHHHhhCCeEeeeecCCC------------CcEEEEEeecCCCCcceEEEEeccCCCccccCCCc
Q 016689          255 QVMLRVG-DLDRAINFYKKAFGMELLRKRDNPD------------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG  321 (384)
Q Consensus       255 hV~L~V~-Dle~s~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g  321 (384)
                      +..|.|. |+++|++||+++||+++.......+            +......+..+    ...+.+.........+...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            3578888 9999999999999999875422111            22222333322    22333322111001112234


Q ss_pred             eeEEEEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          322 YAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       322 ~~hiaf~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       ++++|.|+|   +++++++|+ +|++++.+|.+.+++ .+.++|+||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEec
Confidence             689999998   789999985 899999999888885 37899999999999999865

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.28  E-value=7.4e-11  Score=110.56  Aligned_cols=124  Identities=13%  Similarity=0.012  Sum_probs=84.5

Q ss_pred             ccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCC
Q 016689          107 WVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY  186 (384)
Q Consensus       107 ~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~  186 (384)
                      |.........++.+.|.|+++|+        +||+++|||++......+ +.  .+++..+..+....+.+...  +.  
T Consensus       176 ~~~~~~~~~~~~~l~v~D~~~a~--------~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~--~~--  240 (301)
T 2zw5_A          176 AEEPLTTLAVITELPVRDVAATL--------RLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAV--PG--  240 (301)
T ss_dssp             SCCSCEEEEEEEEEEESCHHHHH--------HHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEEC--CC--
T ss_pred             hhhhcccceeEEEEEeCCHHHHH--------HHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccC--CC--
Confidence            44333445678999999999999        999999999987443222 22  23454432111112222111  11  


Q ss_pred             cCCCCceEEEEEEC-CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          187 DIGTGFGHFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       187 ~~g~g~~hi~~~v~-Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ..+....+++|.|+ |+++++++++++|+++..+|...+. +.+.++|+|||||.|+|.++
T Consensus       241 ~~~~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          241 PGPVEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             SSCCCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             cCCCCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            11223457999999 9999999999999999888766653 34678899999999999874

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.27  E-value=2.9e-11  Score=111.83  Aligned_cols=111  Identities=15%  Similarity=0.193  Sum_probs=82.5

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  329 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V-  329 (384)
                      .++.||.|.|+|++++++||+++|||++..+..    ..  +.+..+    ...+.+.....     .+.+..|++|.| 
T Consensus        25 ~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~V~   89 (252)
T 3pkv_A           25 TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLG----VSQIQFRAAAD-----GTKPFYHIAINIA   89 (252)
T ss_dssp             CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEET----TEEEEEEECCT-----TCCCCCEEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeC----CEEEEEEECCC-----CCCCeeEEEEEec
Confidence            589999999999999999999999999875532    12  334433    24556654321     234678999988 


Q ss_pred             -CCHHHHHHHHHHCCCeEecC-Ccc----CCCCCceEEEEECCCCCeEEEEecCc
Q 016689          330 -DDVYKTAEAIKLSGGKITRE-PGP----LPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       330 -dDvd~~~~~l~~~G~~i~~~-p~~----~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                       +++++++++|+++ +++..+ +..    .+++ ++.+||+|||||.|||++...
T Consensus        90 ~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g-~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           90 ANHFQEGKAWLSGF-GELLTENDEDQAYFPFFN-AYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             TTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTT-EEEEEEECTTCCEEEEEEESS
T ss_pred             HHHHHHHHHHHHhc-ceEeccCCccccccccCC-eEEEEEECCCCCEEEEEEeCC
Confidence             4699999999999 988653 221    1332 588999999999999999764

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.27  E-value=1.8e-10  Score=96.08  Aligned_cols=118  Identities=17%  Similarity=0.225  Sum_probs=79.8

Q ss_pred             ceeeEEEEEeC--CHHHHHhhcCCChhHHhhhcc-CCEEEeeeeCC------CCceEEEEEeeCCCCccEEEEEEecCCC
Q 016689          113 RRMLHVVYRVG--DLDKTINSLGCGYCRFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGV  183 (384)
Q Consensus       113 ~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~L-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~  183 (384)
                      .++. ..|.|.  |+++|+        +||+++| |+++......+      ++....+.+..+  +  ..+.+......
T Consensus         5 ~~i~-~~L~v~~~d~~~A~--------~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~--g--~~~~~~~~~~~   71 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAM--------NFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG--D--QSVHCIDSHVR   71 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHH--------HHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET--T--EEEEEEEESSC
T ss_pred             ccce-EEEEECCCCHHHHH--------HHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC--C--EEEEEECCCCC
Confidence            3555 678886  999999        9999999 99987532221      123333334443  1  12222222101


Q ss_pred             CCCcCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          184 DKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       184 ~~~~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +....+.+ ..++|.|+|   +++++++|+ +|+++..+|.+.++| .+.++++||+|+.|+|.+.
T Consensus        72 ~~~~~~~~-~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           72 HAFDFTPA-FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             CSCCCCTT-EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             CCCCCCCc-eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            11112233 368999999   999999999 999999988887754 4677899999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.27  E-value=1.2e-10  Score=97.04  Aligned_cols=114  Identities=18%  Similarity=0.176  Sum_probs=78.2

Q ss_pred             eeeecC--ChHHHHHHHHHhh-CCeEeeeecCC------CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEE
Q 016689          256 VMLRVG--DLDRAINFYKKAF-GMELLRKRDNP------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA  326 (384)
Q Consensus       256 V~L~V~--Dle~s~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hia  326 (384)
                      ..|.+.  |+++|++||+++| |+++.......      ++......+..+    ...+-+.......... ....+.++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~----g~~~~~~~~~~~~~~~-~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFD-FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCC-CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC----CEEEEEECCCCCCCCC-CCCceEEE
Confidence            567776  9999999999999 99987421111      123333333332    1222222111001111 12336899


Q ss_pred             EEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          327 IGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       327 f~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |.|+|   +++++++++ +|+++..+|.+.+++ .+.++|+||+|+.|+|..+
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            99999   999999999 999999999988886 4889999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.20  E-value=7.4e-11  Score=115.64  Aligned_cols=123  Identities=22%  Similarity=0.265  Sum_probs=90.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecC--CCCcEEEEEeecCCCCcceEEEEeccCCCcc----------ccC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN--PDYKYTIAVMGYGPEDKNAVLELTYNHGVTE----------YDK  318 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~----------~~~  318 (384)
                      .+++||.|.|.|++++++||+++|||++..+...  .........+..+    ...+++..+.....          ...
T Consensus        21 ~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~   96 (381)
T 1t47_A           21 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   96 (381)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHhc
Confidence            5799999999999999999999999999865422  1222344455543    35566665321111          023


Q ss_pred             CCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCC--CCCceEEEEECCCCCeEEEEecC
Q 016689          319 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       319 g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +.++.|++|.|+|+++++++++++|+++..+|....  .+..+.+.++||+|+.++|+++.
T Consensus        97 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           97 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            679999999999999999999999999988775421  11125788999999999999964

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.14  E-value=2e-10  Score=113.97  Aligned_cols=123  Identities=15%  Similarity=0.106  Sum_probs=91.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCC--CCcEEEEEeecCCCCcceEEEEeccCCCc---------------
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DYKYTIAVMGYGPEDKNAVLELTYNHGVT---------------  314 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~lel~~~~~~~---------------  314 (384)
                      +++||.|.|.|+++|++||+++|||++..+.+.+  ...+..+.++.+    ...+.+..+....               
T Consensus        25 ~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~~  100 (424)
T 1sqd_A           25 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASIP  100 (424)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             eEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccccccc
Confidence            5899999999999999999999999987664322  223444555533    3556665542211               


Q ss_pred             ----c------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          315 ----E------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       315 ----~------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                          .      ...+.++.|++|.|+|+++++++++++|++++.+|....+. .+...+++|+|+.++|+++.+.
T Consensus       101 ~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          101 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC
T ss_pred             cccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCC
Confidence                0      12347899999999999999999999999998887654332 3677888999999999987643

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.04  E-value=3.5e-09  Score=88.81  Aligned_cols=114  Identities=11%  Similarity=0.094  Sum_probs=75.8

Q ss_pred             ceeeeeecCChHHHHHHHHHhh-CCeEeeeecCC------CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEE
Q 016689          253 LCQVMLRVGDLDRAINFYKKAF-GMELLRKRDNP------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  325 (384)
Q Consensus       253 ~~hV~L~V~Dle~s~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hi  325 (384)
                      +....+.+.|.++|++||+++| |+++.......      ++.+....+..++    ..+-... ..+ ..  +.. ..+
T Consensus         6 i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~d-~~~-~~--~~~-~sl   76 (139)
T 1tsj_A            6 ITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAID-ANS-GT--ELP-ISL   76 (139)
T ss_dssp             EEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CCE
T ss_pred             eeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEEC-CCC-CC--Cce-EEE
Confidence            4444444569999999999999 99987432211      2233333343321    1221111 111 11  112 578


Q ss_pred             EEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      ++.|+|   +++++++|. +|++++.+|.+.+++ .+..+|+||+|+.|+|..+.
T Consensus        77 ~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           77 FVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             EEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEECC
T ss_pred             EEECCCHHHHHHHHHHHh-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeecc
Confidence            889987   788899998 799999999988886 48999999999999999865

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.02  E-value=1.4e-09  Score=106.62  Aligned_cols=122  Identities=22%  Similarity=0.263  Sum_probs=91.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC--cEEEEEeecCCCCcceEEEEeccCCCcc-------ccCCCce
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTE-------YDKGNGY  322 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~lel~~~~~~~~-------~~~g~g~  322 (384)
                      +++||.+.|.|++++++||+++|||++......+.+  ......+..+    ...+++..+..+..       ...++++
T Consensus        11 ~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~hG~Gv   86 (393)
T 3isq_A           11 HFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKHGDGV   86 (393)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhcCCcE
Confidence            699999999999999999999999999875443322  2233444433    45666665322211       1246799


Q ss_pred             eEEEEEcCCHHHHHHHHHHCCCeEecCCccCCC--CCceEEEEECCCCCeEEEEecC
Q 016689          323 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       323 ~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElve~~  377 (384)
                      .|++|.|+|+++++++++++|++++.+|...+.  +..+.+.+++|.|..+.|++..
T Consensus        87 ~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           87 KDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            999999999999999999999999988865432  2236788999999999999854

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.02  E-value=6.6e-09  Score=87.12  Aligned_cols=118  Identities=10%  Similarity=0.149  Sum_probs=77.2

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhcc-CCEEEeeeeCC------CCceEEEEEeeCCCCccEEEEEEecCCCCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDK  185 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~L-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~  185 (384)
                      +++...-+.+.|.++|+        +||+++| |+++.......      ++....+-+..+  +  ..+-+. ...+. 
T Consensus         4 ~~i~p~l~~~~d~~eA~--------~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~--~--~~~m~~-d~~~~-   69 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAV--------KLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN--G--QVFMAI-DANSG-   69 (139)
T ss_dssp             CSEEEEEECSSCHHHHH--------HHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET--T--EEEEEE-C-----
T ss_pred             CceeEEEEECCCHHHHH--------HHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC--C--EEEEEE-CCCCC-
Confidence            45665655667999999        9999999 99987532222      233334444443  1  111111 11111 


Q ss_pred             CcCCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          186 YDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       186 ~~~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .. .+  ..+++.|+|   +++++++|+ +|+++..++.+..+ +.+..+++||+|+.|+|......
T Consensus        70 ~~-~~--~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~~~  131 (139)
T 1tsj_A           70 TE-LP--ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPEEG  131 (139)
T ss_dssp             ----C--CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC--
T ss_pred             CC-ce--EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecccc
Confidence            11 11  358899987   788899998 79999998887764 56788999999999999986543

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.01  E-value=7.4e-10  Score=107.48  Aligned_cols=125  Identities=16%  Similarity=0.155  Sum_probs=85.8

Q ss_pred             ccceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ce--EEEEEeeCCCCccEEEEEEec-CCC
Q 016689          111 DKRRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RY--TNAFLGYGPEDSHFVVELTYN-YGV  183 (384)
Q Consensus       111 ~~~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~--~~~~l~~g~~~~~~~lel~~~-~~~  183 (384)
                      ...+|+||++.|+  |+++++        +||+++|||++....+.++.  ..  ..+++..    ....+++... ...
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~--------~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~  222 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWA--------NFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKG  222 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHH--------HHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTC
T ss_pred             CeeEECceEEeechhhHHHHH--------HHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCC
Confidence            4568999999999  999999        99999999998776543321  11  2233322    2346676554 221


Q ss_pred             CC-------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeee-CCccc--------cC-CCE-------EEEEEEC----
Q 016689          184 DK-------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR-EPGPV--------KG-GNT-------VIAFIED----  235 (384)
Q Consensus       184 ~~-------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~-~p~~~--------~~-g~~-------~~~~~~D----  235 (384)
                      ..       ...+.|+.|+||.|+|+++++++|+++|+++.. .|...        .. +..       .+.+-+|    
T Consensus       223 ~~~~~~~~~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~  302 (357)
T 1cjx_A          223 AGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEG  302 (357)
T ss_dssp             CSHHHHHHHHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETT
T ss_pred             CChHHHhHHhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCC
Confidence            11       124678999999999999999999999999987 55211        10 111       1356788    


Q ss_pred             CCCCEEEEeecC
Q 016689          236 PDGYKFELLERG  247 (384)
Q Consensus       236 PdG~~iel~~~~  247 (384)
                      |+|+++++....
T Consensus       303 ~~g~llqift~~  314 (357)
T 1cjx_A          303 DKRLLLQIFSET  314 (357)
T ss_dssp             EEEEEEEEEBCC
T ss_pred             CCCeEEEEeccC
Confidence            889998887653

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.98  E-value=1.8e-09  Score=107.02  Aligned_cols=121  Identities=15%  Similarity=0.081  Sum_probs=89.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC--CcEEEEEeecCCCCcceEEEEeccCCCc-------------c-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD--YKYTIAVMGYGPEDKNAVLELTYNHGVT-------------E-  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~lel~~~~~~~-------------~-  315 (384)
                      +++||.|.|.|++++++||++.|||++..+...+.  .....+.+..+    ...++|..+....             . 
T Consensus        31 ~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~~~  106 (418)
T 1sp8_A           31 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAAA  106 (418)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccchh
Confidence            68999999999999999999999999876643321  23455555543    3556666542210             0 


Q ss_pred             -----ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          316 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       316 -----~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                           ..++.++.|++|.|+|+++++++++++|+++..+|....+. -+...+++|+|..++|+++.
T Consensus       107 ~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          107 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECC
T ss_pred             HHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccC
Confidence                 12357899999999999999999999999998877543221 35667788888888888876

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.98  E-value=8e-09  Score=86.54  Aligned_cols=113  Identities=13%  Similarity=0.101  Sum_probs=76.7

Q ss_pred             eeecC-ChHHHHHHHHHhhC-CeEeeeecC------CCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          257 MLRVG-DLDRAINFYKKAFG-MELLRKRDN------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       257 ~L~V~-Dle~s~~FY~~vLG-~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      .|.+. |.++|++||+++|| .++......      +++.+....+..+    +..+-+........+..+++ ..+++.
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~~~-~~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFTPA-MSLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCCTT-SCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCCCC-EEEEEE
Confidence            45566 89999999999999 666533111      2334444445443    22333332111111222233 578999


Q ss_pred             cCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          329 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       329 VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |+|   +++++++|. .|++++.+|.+.+++ .+..+++||+|+.|+|..+
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence            999   999999995 688999999988886 3889999999999999754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.96  E-value=1.1e-08  Score=88.76  Aligned_cols=115  Identities=16%  Similarity=0.079  Sum_probs=79.2

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCC--------------CCcEEEEEeecCCCCcceEEEEeccCCCccccCCCc
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNP--------------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG  321 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g  321 (384)
                      -.|.+.|.++|++||+++||+++.......              ++.+..+.+..+    +..|-+....+. .+..+++
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~~~  103 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKINNG  103 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCCSS
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCCc
Confidence            456677999999999999999976543221              133444445443    233333332222 2222333


Q ss_pred             eeEEEEEc--------CCHHHHHHHHHHCC-CeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          322 YAQIAIGT--------DDVYKTAEAIKLSG-GKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       322 ~~hiaf~V--------dDvd~~~~~l~~~G-~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       ..+++.+        +|+++++++|.+.| ++++.+|.+.+++. +..+|+||+|+.|+|..++
T Consensus       104 -~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~-r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          104 -ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGG-KMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSS-EEEEEECTTSCEEEEEEEC
T ss_pred             -EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCc-EEEEEECCCCCEEEEEeCC
Confidence             3455555        58999999999999 79999998888863 7899999999999998754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.93  E-value=2.9e-08  Score=86.10  Aligned_cols=122  Identities=13%  Similarity=0.147  Sum_probs=82.9

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC--------------CCceEEEEEeeCCCCccEEEE
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVE  176 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~le  176 (384)
                      |.+.-....|.+.|.++|+        +||+++||.++.......              ++....+.+..+    ...+-
T Consensus        22 mmm~~i~PyL~f~~a~eAi--------~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm   89 (172)
T 3l20_A           22 FYMTALFPYIAFENSKEAL--------AYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVL   89 (172)
T ss_dssp             CCCCEEEEEEEESCHHHHH--------HHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEE
T ss_pred             EecCcEEEEEEECCHHHHH--------HHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEE
Confidence            3444456778888999999        999999999976553321              234455556554    22333


Q ss_pred             EEecCCCCCCcCCCCceEEEEEE--------CCHHHHHHHHHHcC-CeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          177 LTYNYGVDKYDIGTGFGHFGIAV--------EDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       177 l~~~~~~~~~~~g~g~~hi~~~v--------~Dv~~~~~~l~~~G-~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +....+. ....++++ .+++.+        +|+++++++|+++| +++..++.+.++| .+..+++||+|+.|+|....
T Consensus        90 ~~D~~g~-~~~~~~~~-sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG-~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           90 CSDSFGR-ADKINNGI-SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWG-GKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEECTTC-CCCCCSSE-EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTS-SEEEEEECTTSCEEEEEEEC
T ss_pred             EECCCCC-CCCCCCcE-EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            3332222 22233343 367776        57899999999999 7999988877654 45778999999999997653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.89  E-value=1.7e-09  Score=97.72  Aligned_cols=153  Identities=9%  Similarity=0.053  Sum_probs=100.9

Q ss_pred             cchhhhhhhc---cccccccccc-----------------chhhhhhcccCCceeeccCCCcccCcccCCcchhh---cc
Q 016689           51 SRRLALFQLG---AAIPQSHFFG-----------------AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVL---DW  107 (384)
Q Consensus        51 ~~~~~~~~~~---~~~p~~~~~g-----------------~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~  107 (384)
                      +++.|+||+|   +++|+|++++                 +.|+|+.||+||+++++++.....-....+++++.   +|
T Consensus        66 ~~~~Glkh~a~i~i~vp~~~el~~lL~~~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~  145 (244)
T 3e0r_A           66 RKVEGRKKLARLIVKVENPLEIEGILSKTDSIHRLYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLAS  145 (244)
T ss_dssp             BCCCSSCSEEEEEEEESSHHHHHHHHTTCSCCSEEEECSSSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSC
T ss_pred             ccccccceeeeEEEEcCCHHHHHHHHhcccccccccccCCcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccc
Confidence            5679999996   8999999984                 22999999999999999865444321222344331   12


Q ss_pred             cccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCc
Q 016689          108 VKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD  187 (384)
Q Consensus       108 ~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~  187 (384)
                      ..--...+ ||+|.|.|.++          .||++ +|+        +   ....|......+           -+.+.+
T Consensus       146 ~gLs~fti-~I~LnV~d~~~----------sFy~~-~~~--------~---~~~~F~~a~G~d-----------l~~~~~  191 (244)
T 3e0r_A          146 ISLSKFEI-SMELHLPTDIE----------SFLES-SEI--------G---ASLDFIPAQGQD-----------LTVDNT  191 (244)
T ss_dssp             CCCSSEEE-EEEEEECTTCC----------CSCCH-HHH--------T---TTEEEEECCCTT-----------TTCCTT
T ss_pred             cCCCCcEE-EEEEEcCchHH----------HHhhc-cCC--------c---ccEEEEcccCCC-----------CCCCCC
Confidence            21223457 99999999966          58875 444        1   124454421000           012223


Q ss_pred             CCCCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          188 IGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       188 ~g~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ...|+..+-|.|+  |+.++.++|+++|..+...        ..++.+.||+|+.|-|.+
T Consensus       192 ~t~gLe~l~~~v~~~dl~~l~~~L~~~g~~idkk--------~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          192 VTWDLSMLKFLVNELDIASLRQKFESTEYFIPKS--------EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SBSSEEEEEEEESSCCHHHHHHHTTTSCEECCTT--------CCEEEEECTTSCEEEEEE
T ss_pred             CccCceEEEEEeCHHHHHHHHHHHHhCCceEccc--------CCEEEEECCCCCEEEEEE
Confidence            4458888898886  4889999999998754322        226679999999998764

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.88  E-value=7.1e-08  Score=80.71  Aligned_cols=114  Identities=11%  Similarity=0.174  Sum_probs=76.9

Q ss_pred             EEEEEeC-CHHHHHhhcCCChhHHhhhccC-CEEEeeeeC------CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcC
Q 016689          117 HVVYRVG-DLDKTINSLGCGYCRFYTECLG-MKLLRKRDI------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI  188 (384)
Q Consensus       117 Hv~l~V~-Dl~~a~~~~~~~~~~FY~~~LG-~~~~~~~~~------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~  188 (384)
                      ...|.+. |.++|+        +||+++|| .++.....+      +++....+.+..+    ...+-+...........
T Consensus        12 ~P~L~f~g~a~eA~--------~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~   79 (138)
T 3oms_A           12 TTFLMFEGKAEEAM--------NFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTF   79 (138)
T ss_dssp             CEEEEESSCHHHHH--------HHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCC
T ss_pred             EEEEEECCCHHHHH--------HHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCC
Confidence            3466777 899999        99999999 566543212      2344455556554    22333332111112222


Q ss_pred             CCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          189 GTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       189 g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ++++ .+++.|+|   +++++++|+ +|+++..+|.+.++ +.+..+++||+|+.|.|..
T Consensus        80 ~~~~-~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           80 TPAM-SLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             CTTS-CEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEE
T ss_pred             CCCE-EEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEe
Confidence            3343 48999999   999999995 68899998887775 4568889999999999864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.29  E-value=5.2e-05  Score=70.44  Aligned_cols=164  Identities=12%  Similarity=0.102  Sum_probs=102.3

Q ss_pred             hhhcccccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC
Q 016689          103 NVLDWVKSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG  182 (384)
Q Consensus       103 ~~~~~~~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~  182 (384)
                      +++.....|..+++|+++.|.++++ +        . |. ..||++......+..+..+..+.++    ...||+....+
T Consensus        13 ~~~~~~~~M~~~lDHlVi~v~~l~~-l--------G-~~-~~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~   77 (274)
T 3p8a_A           13 GLVPRGSHMILKFDHIIHYIDQLDR-F--------S-FP-GDVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVEN   77 (274)
T ss_dssp             --------CCCEEEEEEEECTTGGG-C--------C-CG-GGSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESC
T ss_pred             ccccCCcCccccCCEEEEEeccHHH-c--------C-Cc-cceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecC
Confidence            3444456688999999999998742 2        2 22 2348876655445444456666552    34788864322


Q ss_pred             C-----------C--C-------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeC---CccccCCC---EEEEEEECC
Q 016689          183 V-----------D--K-------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE---PGPVKGGN---TVIAFIEDP  236 (384)
Q Consensus       183 ~-----------~--~-------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~---p~~~~~g~---~~~~~~~DP  236 (384)
                      .           .  .       ...+.|+.++++.++|+++..++++++|+.+...   ....++|.   .+.++..|+
T Consensus        78 ~~~~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~  157 (274)
T 3p8a_A           78 NEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQ  157 (274)
T ss_dssp             HHHHHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECS
T ss_pred             cccccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCC
Confidence            1           1  0       1345799999999999999999999999876421   11122232   335566776


Q ss_pred             C--CCEE-EEeecCC-----------CC---CCceeeeeecCChHHHHHHHHHhhCCeEeee
Q 016689          237 D--GYKF-ELLERGP-----------TP---EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  281 (384)
Q Consensus       237 d--G~~i-el~~~~~-----------~~---~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~  281 (384)
                      +  +..+ -|+|...           .|   ..+.+|.+.+.|.+++++.|+++||.+....
T Consensus       158 ~~~~~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          158 DDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SCCSSCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CccCCCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            5  3222 3344331           11   2599999999999999999999999998644

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.04  E-value=0.00018  Score=61.49  Aligned_cols=130  Identities=14%  Similarity=0.181  Sum_probs=86.0

Q ss_pred             EEEEeC-CHHHHHhhcCCChhHHhhhcc-CCEEEeeeeC-------CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcC
Q 016689          118 VVYRVG-DLDKTINSLGCGYCRFYTECL-GMKLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI  188 (384)
Q Consensus       118 v~l~V~-Dl~~a~~~~~~~~~~FY~~~L-G~~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~  188 (384)
                      ..|.+. |.++++        +||+++| |.++......       +++....+-+..+  +  ..+-+... .+ ....
T Consensus         9 PyL~f~g~a~eAi--------~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~--g--~~~m~~d~-~p-~~~~   74 (163)
T 1u69_A            9 ICLWYDSAALEAA--------TFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM--G--IPCLGLNG-GP-AFRH   74 (163)
T ss_dssp             EEEEESSCHHHHH--------HHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET--T--EEEEEEEC-CT-TCCC
T ss_pred             EEEEECCCHHHHH--------HHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC--C--EEEEEECC-CC-CcCC
Confidence            456666 999999        9999999 9988743222       1244445555554  1  12222221 22 2222


Q ss_pred             CCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCCceeeeeecCChHH
Q 016689          189 GTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDR  265 (384)
Q Consensus       189 g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~~~hV~L~V~Dle~  265 (384)
                      ..++ .+.+.++|   +++++++|.+.|+++.      .     +..++||.|+.|.|..+.-.      -.+.-.|.++
T Consensus        75 ~~~~-sl~v~~~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~~~~------~~~~d~d~~~  136 (163)
T 1u69_A           75 SEAF-SFQVATDDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPRVLS------EAIASPDRAA  136 (163)
T ss_dssp             CTTE-EEEEEESSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEHHHH------HHHTCSSHHH
T ss_pred             CCce-EEEEEeCCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeEchH------HhccCCCHHH
Confidence            3343 58889988   6778899998898876      1     12599999999999864200      1223478999


Q ss_pred             HHHHHHHhhCCeEe
Q 016689          266 AINFYKKAFGMELL  279 (384)
Q Consensus       266 s~~FY~~vLG~~~~  279 (384)
                      +.+-++..|+|+-.
T Consensus       137 ~~r~~~am~~m~k~  150 (163)
T 1u69_A          137 ARRAFEAMMTMGRI  150 (163)
T ss_dssp             HHHHHHHHTTCSSC
T ss_pred             HHHHHHHHHCCcce
Confidence            99999999999754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.77  E-value=0.00038  Score=59.49  Aligned_cols=103  Identities=17%  Similarity=0.134  Sum_probs=66.0

Q ss_pred             eeecC-ChHHHHHHHHHhh-CCeEeeeecC-------CCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEE
Q 016689          257 MLRVG-DLDRAINFYKKAF-GMELLRKRDN-------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       257 ~L~V~-Dle~s~~FY~~vL-G~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      -|... |.+++++||+++| |.++......       +++......+..+    +..+-+... .+ ......+ ..+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~-~p-~~~~~~~-~sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNG-GP-AFRHSEA-FSFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEEC-CT-TCCCCTT-EEEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECC-CC-CcCCCCc-eEEEE
Confidence            45555 9999999999999 9988742211       1234444444443    222222221 11 2222234 36778


Q ss_pred             EcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          328 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       328 ~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      .|+|   +++++++|.+.|+++.      ..     ..++||.|+.|.|....
T Consensus        83 ~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           83 ATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEc
Confidence            8877   7888999998898876      12     27999999999998754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.87  E-value=0.0023  Score=68.15  Aligned_cols=111  Identities=16%  Similarity=0.218  Sum_probs=67.8

Q ss_pred             cCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--c---------c------cCC-Cc
Q 016689          260 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--E---------Y------DKG-NG  321 (384)
Q Consensus       260 V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~---------~------~~g-~g  321 (384)
                      ..-++++++||++.+++......   +...-...+...  .....+++.......  .         .      ... .-
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~   94 (941)
T 3opy_B           20 ISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLEED--QNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSI   94 (941)
T ss_dssp             -CC-HHHHHHHHHTTCCEECSSC---SCCC---EECCT--TSCCEEEEECSSCSCHHHHHHHHHHHCCC----------C
T ss_pred             HHHHHHHHHHHHhhccceecccc---CCcceeEEEecC--CCeEEEEEEeccccchhHHHHHHHHhhhhccccccccccc
Confidence            45689999999999999875422   221223334322  224455554331110  0         0      011 12


Q ss_pred             eeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          322 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       322 ~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      ..|+.|.+.|++++.+.|.+.+.++-.-|.+..   ...+|..||+||.|+|.+.+.
T Consensus        95 ~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           95 QSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             CceEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            239999999999999999999987665554322   257899999999999998663

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.74  E-value=0.0015  Score=69.47  Aligned_cols=112  Identities=18%  Similarity=0.280  Sum_probs=68.5

Q ss_pred             EeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC------------------
Q 016689          121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------------------  182 (384)
Q Consensus       121 ~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~------------------  182 (384)
                      ...-+++++        +||++.|++......   +...-.+++.  .......+++.....                  
T Consensus        19 ~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (941)
T 3opy_B           19 NISLLQASI--------DFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLTRS   85 (941)
T ss_dssp             C-CC-HHHH--------HHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC--
T ss_pred             CHHHHHHHH--------HHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhhcc
Confidence            345689999        999999999875321   2111134443  223344555543210                  


Q ss_pred             CCCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          183 VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       183 ~~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ....+...--.|+.|.+.|++++.+.|.+.+.++-..|.+.   +...+|+.||+||.|+|.+...
T Consensus        86 ~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           86 LYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             --------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             cccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence            00111111223899999999999999999998877666533   3347789999999999988764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=92.65  E-value=0.83  Score=41.96  Aligned_cols=104  Identities=12%  Similarity=0.152  Sum_probs=65.3

Q ss_pred             CCCceeeeeecCChHHHHHHHHHhhC-----CeEeeeecCCCCc--EEEEEeecCCCCcceEEEEeccCCC---------
Q 016689          250 PEPLCQVMLRVGDLDRAINFYKKAFG-----MELLRKRDNPDYK--YTIAVMGYGPEDKNAVLELTYNHGV---------  313 (384)
Q Consensus       250 ~~~~~hV~L~V~Dle~s~~FY~~vLG-----~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~lel~~~~~~---------  313 (384)
                      .-.++|+.+.|.+++        .||     |++......+..+  -.++.+.      ...||+......         
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd------g~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN------ENYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS------SSEEEEEEESCHHHHHHHTTS
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC------CEEEEEEeecCcccccccccc
Confidence            346999999999884        467     8887655444222  2344442      456777543221         


Q ss_pred             --c--c-------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC---ccCCCCC---ceEEEEECCC
Q 016689          314 --T--E-------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP---GPLPGIN---TKITACLDPD  367 (384)
Q Consensus       314 --~--~-------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p---~~~~~~~---~~~~~~~DPd  367 (384)
                        .  .       ...++|+.++++.|+|+++..+++++.|+.+..+.   ...|.|.   .+.++..|++
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~  158 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQD  158 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSS
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCC
Confidence              0  1       12457999999999999999999999998754221   1123331   3456666765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-26
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-20
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	9e-24
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-16
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-22
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-14
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-16
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-14
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-15
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	9e-08
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	4e-15
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-10
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-14
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-09
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	3e-14
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-13
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-06
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	3e-13
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-09
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-13
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-06
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	9e-13
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-12
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-08
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-11
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	9e-06
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-11
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-07
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	1e-11
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-06
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-09
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-05
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-09
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	8e-09
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-04
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	9e-09
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	9e-09
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-04
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	9e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	0.001
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-07
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	3e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	2e-07
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	6e-06
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	2e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	5e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	1e-05
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	5e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	1e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	0.002
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-06
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-05
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	3e-06
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	9e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	9e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	4e-04
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	1e-04
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	1e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	3e-04
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-04
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.001
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	3e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (249), Expect = 2e-26
 Identities = 74/140 (52%), Positives = 98/140 (70%), Gaps = 8/140 (5%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+LH + RVGDL ++I         FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    
Sbjct: 2   RLLHTMLRVGDLQRSI--------DFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
           V+ELTYN+GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+
Sbjct: 54  VIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFV 113

Query: 234 EDPDGYKFELLERGPTPEPL 253
           EDPDGYK EL+E       L
Sbjct: 114 EDPDGYKIELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 84.0 bits (206), Expect = 3e-20
 Identities = 62/128 (48%), Positives = 85/128 (66%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
            MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 375
           Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

Query: 376 NLDFLKEL 383
             D  + L
Sbjct: 126 EKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 93.6 bits (231), Expect = 9e-24
 Identities = 67/140 (47%), Positives = 82/140 (58%), Gaps = 13/140 (9%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           RRMLH + RVGDLD++I        +FYTE LGMK+LRK D+PED+YT  FLGYGPE S 
Sbjct: 2   RRMLHTMIRVGDLDRSI--------KFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS 53

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            V+ELTYNYGV  Y     +GH  I VEDV + V  ++     +  E          +AF
Sbjct: 54  TVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAF 108

Query: 233 IEDPDGYKFELLERGPTPEP 252
           + DPDGY  ELL      E 
Sbjct: 109 VVDPDGYYIELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 73.6 bits (179), Expect = 1e-16
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 5/129 (3%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
            M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+GVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 375
           Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+    ++
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLN 121

Query: 376 NLDFLKELE 384
               +++ E
Sbjct: 122 EKTMMEKAE 130

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (220), Expect = 8e-22
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 34/161 (21%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
            +   + RV D  K++         FYT  LGM L++K D P  +++  FL Y  ++   
Sbjct: 23  LLQQTMLRVKDPKKSL--------DFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIP 74

Query: 174 VVE---------------LTYNYGVDKYD---------IGTGFGHFGIAVEDVAKTVDLV 209
             +               LT+N+G +  +            GFGH GIAV DV       
Sbjct: 75  KEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 134

Query: 210 KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 250
           +  G K  ++P    G    +AFI+DPDGY  E+L      
Sbjct: 135 EELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (167), Expect = 2e-14
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 30/152 (19%)

Query: 247 GPTPEP----LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE--- 299
              P      L Q MLRV D  ++++FY +  GM L++K D P  K+++  + Y  +   
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI 73

Query: 300 ------------DKNAVLELTYNHGVTEYD---------KGNGYAQIAIGTDDVYKTAEA 338
                        + A LELT+N G  + +            G+  I I   DVY   + 
Sbjct: 74  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 133

Query: 339 IKLSGGKITREPGPLPGINTKITACLDPDGWK 370
            +  G K  ++P    G    +    DPDG+ 
Sbjct: 134 FEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 163

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 71.9 bits (175), Expect = 7e-16
 Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 16/132 (12%)

Query: 115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 174
            + +    G LD+ I        RFY E L +K +       + Y      +G   + + 
Sbjct: 10  QIRIARPTGQLDEII--------RFYEEGLCLKRIG-EFSQHNGYDGVM--FGLPHADYH 58

Query: 175 VELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 231
           +E T   G     +          V    ++A     +K  G +      P         
Sbjct: 59  LEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--V 116

Query: 232 FIEDPDGYKFEL 243
            IEDPDG++   
Sbjct: 117 TIEDPDGWRIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 66.9 bits (162), Expect = 3e-14
 Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 6/127 (4%)

Query: 253 LCQVMLRV----GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 308
                +R+    G LD  I FY++   ++ + +    +    +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 309 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                      +          ++      +K  G +      P            DPDG
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDG 123

Query: 369 WKSVFVD 375
           W+ VF++
Sbjct: 124 WRIVFMN 130

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 70.0 bits (170), Expect = 4e-15
 Identities = 17/143 (11%), Positives = 33/143 (23%), Gaps = 12/143 (8%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           +   H+     + ++           FY   LG++ ++     +D             S 
Sbjct: 5   KGHHHISMVTKNANENN--------HFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSP 56

Query: 173 FVV--ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD-LVKAKGGKVTREPGPVKGGNTV 229
                          Y         G+ V           + +   V             
Sbjct: 57  GTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPA 116

Query: 230 IAFIEDPDGYKFELLERGPTPEP 252
           + F ED +G +  LL        
Sbjct: 117 LQF-EDAEGLRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 48.9 bits (115), Expect = 9e-08
 Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 2/115 (1%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIA--VMGYGPEDKNAVLELTYNHGV 313
           + +   + +   +FYK   G+  ++   N D                   +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 314 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             Y   N   +I +            +       +        N       D +G
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 70.7 bits (172), Expect = 4e-15
 Identities = 22/151 (14%), Positives = 35/151 (23%), Gaps = 26/151 (17%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
               HV     D               ++  LG  L  + D+      +A L        
Sbjct: 12  LAFHHVELWCADAASAA--------GRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 173 FVVELTYNYGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGK 215
           F+    Y +G D                     G       + V D         A G +
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 216 VTREPGPVKGGNTVIAFIEDPDGYKFELLER 246
               P  +  G   +A +E         +  
Sbjct: 124 PAFGPVDLGRG-FRLAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 55.2 bits (132), Expect = 9e-10
 Identities = 19/117 (16%), Positives = 28/117 (23%), Gaps = 17/117 (14%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V L   D   A   +    G  L  + D        A +       + +    Y HG   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 316 -----------------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 355
                             D G     +A+   D      A   +G +    P  L  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 25/157 (15%), Positives = 43/157 (27%), Gaps = 32/157 (20%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           +R  H+ +  GD             R ++  LGM+   K D+      +A       D  
Sbjct: 11  KRFHHIEFWCGDATNVA--------RRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 173 FVVELTYNYGVDKYDIG-----------------------TGFGHFGIAVEDVAKTVDLV 209
           F+    Y+  +   +I                         G     I VED      + 
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 210 KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER 246
            A G   +  P  +      IA ++         +  
Sbjct: 123 VANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.1 bits (129), Expect = 2e-09
 Identities = 16/123 (13%), Positives = 27/123 (21%), Gaps = 23/123 (18%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           +    GD       +    GM    K D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 316 YDKG-----------------------NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 352
            +                          G   +AI  +D          +G   +  P  
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV 135

Query: 353 LPG 355
           L  
Sbjct: 136 LNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 3e-14
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 18/148 (12%)

Query: 109 KSDKRRML---HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLG 165
           K ++ R L    V + VG+  +           FY   +G + L  + +           
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAA--------SFYCNKMGFEPLAYKGLETGSREVVSHV 54

Query: 166 YGPEDSHFVVELTYNYGVDKYDI-----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 220
                  FV+    N    +        G G       VED    V   + +G K+ REP
Sbjct: 55  IKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREP 114

Query: 221 GPVK--GGNTVIAFIEDPDGYKFELLER 246
              +   G    A ++        L+E+
Sbjct: 115 WVEEDKFGKVKFAVLQTYGDTTHTLVEK 142

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 30/141 (21%), Positives = 41/141 (29%), Gaps = 12/141 (8%)

Query: 247 GPTPEP-----LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK 301
           GP PE         V   VG+  +A +FY    G E L  +        +          
Sbjct: 1   GPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKI 60

Query: 302 NAVLELTYNHGVTEYDK-----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI 356
             VL    N    E        G+G   IA   +D     +  +  G KI REP      
Sbjct: 61  VFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDK 120

Query: 357 NTKIT--ACLDPDGWKSVFVD 375
             K+               V+
Sbjct: 121 FGKVKFAVLQTYGDTTHTLVE 141

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 66.1 bits (160), Expect = 1e-13
 Identities = 20/142 (14%), Positives = 37/142 (26%), Gaps = 19/142 (13%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R  H +    +L  T           +T+ LG  L  +           F          
Sbjct: 5   RFDHALMYGDELPATY--------DLFTKVLGFYLAEQVLDENGTRVAQF--------LS 48

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVI 230
           +    ++     +       H    +E      +  DL+      +   P      +   
Sbjct: 49  LSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKT 108

Query: 231 AFIEDPDGYKFELLERGPTPEP 252
            +  DP G + E+   G    P
Sbjct: 109 IYFFDPSGNRNEVFCGGDYNYP 130

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 14/113 (12%), Positives = 35/113 (30%), Gaps = 5/113 (4%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
            ++   +L    + + K  G  L  +  + +       +    +  +         G   
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKG--- 65

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             + +  +      +D+ + A+ I ++   I   P      + K     DP G
Sbjct: 66  --RLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 64.2 bits (155), Expect = 3e-13
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVV 175
           H+ + V DL++          R        + +   D  +   +   F   G       +
Sbjct: 7   HMTFIVRDLERMT--------RILEGVFDAREVYASDTEQFSLSREKFFLIGD------I 52

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 235
            +    G    +       F I   D  +  + V   G  +      V+G    I +  D
Sbjct: 53  WVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYD 111

Query: 236 PDGYKFEL 243
            D + FEL
Sbjct: 112 DDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 53.4 bits (127), Expect = 1e-09
 Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 6/113 (5%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           +   V DL+R     +  F    +   D   +  +        +     + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQGEKL 62

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
            ++   +    I   D  + AE +   G  +      + G    I    D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDN 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 64.3 bits (155), Expect = 3e-13
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 20/144 (13%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
            + HV Y   D D+          ++Y E  G   L + + PE       +    + +  
Sbjct: 7   CIDHVAYACPDADEAS--------KYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEH 58

Query: 174 VVEL----------TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 223
           + ++          T    + K++   G  H    V+D+      ++ +G ++  +   +
Sbjct: 59  MTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKL 118

Query: 224 KGGNTVIAFI--EDPDGYKFELLE 245
             G   I F+  +   G   EL +
Sbjct: 119 GTGGNRINFMHPKSGKGVLIELTQ 142

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 14/126 (11%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP--EDKNAVLELTY---- 309
           V     D D A  +Y++ FG   L + +NP+      +M       +    +++      
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLND 70

Query: 310 ----NHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL- 364
                  + +++   G   +A   DD+   +  ++  G ++  +  P  G        + 
Sbjct: 71  ESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFMH 129

Query: 365 --DPDG 368
                G
Sbjct: 130 PKSGKG 135

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 63.2 bits (152), Expect = 9e-13
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 26/149 (17%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---- 169
           RM +V   V  LD  I         F+ E +G+ L  + ++  +                
Sbjct: 9   RMDNVSIVVESLDNAI--------SFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIA 59

Query: 170 -----DSHFVVELTYNYGV-------DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 217
                D H  +EL+                   G+      VED+ + V  +   G ++ 
Sbjct: 60  MMVTPDGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELV 119

Query: 218 REPGPVKGGNTVIAFIEDPDGYKFELLER 246
            E    +     + +I   +G    L E 
Sbjct: 120 GEVVQYENSYR-LCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 18/129 (13%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V + V  LD AI+F+ +  G+ L  + +                 + A++     H   E
Sbjct: 13  VSIVVESLDNAISFF-EEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 71

Query: 316 ----------------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 359
                                GY ++    +D+ +    +   G ++  E       + +
Sbjct: 72  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYR 130

Query: 360 ITACLDPDG 368
           +      +G
Sbjct: 131 LCYIRGVEG 139

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 63.3 bits (153), Expect = 1e-12
 Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 18/144 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + M  VV+ VG+  +           +Y+   GM+L+            A        + 
Sbjct: 6   KGMDAVVFAVGNAKQAA--------HYYSTAFGMQLVAYSGPENGSRETASYVLTNGSAR 57

Query: 173 FVVELTYNYGVDKYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK 224
           FV+                     G G     I V D           G +   EP  +K
Sbjct: 58  FVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELK 117

Query: 225 GGN--TVIAFIEDPDGYKFELLER 246
             +   V+A I      +  L++R
Sbjct: 118 DEHGTVVLAAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 10/130 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V+  VG+  +A ++Y  AFGM+L+      +     A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 316 YD--------KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL--D 365
                      G+G   +AI   D           G +   EP  L   +  +       
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIAT 130

Query: 366 PDGWKSVFVD 375
               +   VD
Sbjct: 131 YGKTRHTLVD 140

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 60.1 bits (144), Expect = 1e-11
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 18/143 (12%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R  ++   V DL K+          FY + LG+ +  + +                  +
Sbjct: 15  VRCAYMEIVVTDLAKSR--------EFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHN 62

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            V+       V  +       +   +  +V       K  G +  R       G      
Sbjct: 63  LVLRQGPIAAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVR 116

Query: 233 IEDPDGYKFELLERGPTPEPLCQ 255
           +EDP G+ +E        E L Q
Sbjct: 117 VEDPLGFPYEFFYETEHVERLTQ 139

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.1 bits (100), Expect = 9e-06
 Identities = 24/128 (18%), Positives = 36/128 (28%), Gaps = 17/128 (13%)

Query: 248 PTP-EPLCQVM------LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED 300
           PTP  P   ++      + V DL ++  FY    G+ +  + +N  Y             
Sbjct: 5   PTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLR----SLEEFIH 60

Query: 301 KNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 360
            N VL       V        +A       +V       K  G +  R            
Sbjct: 61  HNLVLRQGPIAAV------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDS 114

Query: 361 TACLDPDG 368
               DP G
Sbjct: 115 VRVEDPLG 122

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 59.6 bits (143), Expect = 1e-11
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 17/130 (13%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R  HV  RV D+ K +          Y E LG+  + + D                    
Sbjct: 7   RPGHVQLRVLDMSKAL--------EHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
             +                G   +  + + +    + A G  V + P             
Sbjct: 59  EADEPGMDF---------MGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF 109

Query: 234 EDPDGYKFEL 243
           + P G+ FEL
Sbjct: 110 QAPSGHHFEL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 9/113 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           V LRV D+ +A+  Y +  G+  + + D                        +      +
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
               +      +  D + +    +   G  + + P        +      P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 17/132 (12%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+ H      D+ +          R Y E LG ++       +     A++         
Sbjct: 5   RLDHFNQVTPDVPRG---------RAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDT 55

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
            +       +      T   H  I +       D + A       E GP + G +   ++
Sbjct: 56  ALTGGNGPRMHHVAFATHEKHNIIQI------CDKMGALRISDRIERGPGRHGVSNAFYL 109

Query: 234 --EDPDGYKFEL 243
              DPDG++ E+
Sbjct: 110 YILDPDGHRIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 44.9 bits (105), Expect = 3e-06
 Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 9/116 (7%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
                 D+ R   +  +  G  +     + D     A M       +  L       +  
Sbjct: 9   FNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRM-- 65

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGW 369
               +  A       ++ +  + +         E GP     +       LDPDG 
Sbjct: 66  ----HHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.2 bits (124), Expect = 5e-09
 Identities = 29/127 (22%), Positives = 44/127 (34%), Gaps = 22/127 (17%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H+   V DL  +I         FY + LG +L             A+L  G       + 
Sbjct: 7   HLTLAVADLPASI--------AFYRDLLGFRLEA------RWDQGAYLELG----SLWLC 48

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 236
           L+                FGIA  D A+    ++A G  V         G++   +  DP
Sbjct: 49  LSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDP 104

Query: 237 DGYKFEL 243
           DG++ E 
Sbjct: 105 DGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           L  + L V DL  +I FY+   G  L  + D   Y    ++           L L+    
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLW----------LCLSREPQ 54

Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                    +    I   D  + A  ++  G +  ++              LDPDG
Sbjct: 55  YGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDG 106

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 52.3 bits (124), Expect = 5e-09
 Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 19/131 (14%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + + H+   V DL K++         F+ E LG+ L         R+         +   
Sbjct: 3   QSLNHLTLAVSDLQKSV--------TFWHELLGLTLHA-------RWNTGAYLTCGDLWV 47

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            +        V   +       F +A ED       ++  G  VT        G +   +
Sbjct: 48  CLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--Y 103

Query: 233 IEDPDGYKFEL 243
             DPDG+K EL
Sbjct: 104 FLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           + L V DL +++ F+ +  G+ L  + +   Y     +      D+           V  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEAR-------QYVPP 60

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
            +    +    +  +D    ++ ++ +G  I ++              LDPDG
Sbjct: 61  QESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDG 109

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 50.8 bits (120), Expect = 8e-09
 Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 21/131 (16%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R +       +  +           FY + LGM              + ++         
Sbjct: 2   RRVVANIATPEPARAQ--------AFYGDILGM---------PVAMDHGWIVTHASPLEA 44

Query: 174 VVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
             ++++     +   GT      I V++  +    +   G  +   P     G     F+
Sbjct: 45  HAQVSFAR---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFL 100

Query: 234 EDPDGYKFELL 244
            DP G    +L
Sbjct: 101 RDPFGKLINIL 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 20/113 (17%), Positives = 28/113 (24%), Gaps = 13/113 (11%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
             +   +  RA  FY    GM              I       E    V          E
Sbjct: 6   ANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQV------SFARE 53

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
              G     ++I  D+  +    I  +G  I   P        +     DP G
Sbjct: 54  GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 105

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 52.0 bits (124), Expect = 9e-09
 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 20/139 (14%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           + M  V   V  LDK             TE  G   + + D        A       ++ 
Sbjct: 11  QGMGSVELTVRRLDKMA--------STLTEIFGYTEVSRNDQ------EAIFQSIKGEAF 56

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
             + + Y  G  +        H  I V    ++A   + VK +G   +   G +      
Sbjct: 57  GEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFK 113

Query: 230 IAFIEDPDGYKFELLERGP 248
             +  + +G  FE+   GP
Sbjct: 114 SLYFRESNGILFEIATDGP 132

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 51.1 bits (121), Expect = 9e-09
 Identities = 23/133 (17%), Positives = 38/133 (28%), Gaps = 22/133 (16%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
           R + ++ + V D+             F T+ LG+      D                   
Sbjct: 3   RSLGYMGFAVSDVAAWR--------SFLTQKLGLMEAGTTDN------GDLFRIDSRAWR 48

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
             V+        + D     G+       +A+  D +K  G  VT     +     V   
Sbjct: 49  IAVQ------QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGL 102

Query: 233 I--EDPDGYKFEL 243
           I   DP G   E+
Sbjct: 103 ITFADPFGLPLEI 115

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 14/118 (11%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 312
           L  +   V D+    +F  +  G+      DN D     +                    
Sbjct: 5   LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAW------------RIAVQ 52

Query: 313 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDG 368
             E D              + + A+ +K +G  +T     L      T +    DP G
Sbjct: 53  QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 48.2 bits (113), Expect = 9e-08
 Identities = 22/138 (15%), Positives = 35/138 (25%), Gaps = 12/138 (8%)

Query: 114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 173
           R+      V D+ K++         FY +            P              D+  
Sbjct: 2   RISLFAVVVEDMAKSM--------EFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVE 53

Query: 174 VVEL-TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
            V      +                    V K    +   G +   +P     G    A 
Sbjct: 54  TVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AI 112

Query: 233 IEDPDGYKFELLERGPTP 250
           ++DPDG   +L    P P
Sbjct: 113 VKDPDGNVVDLFA--PLP 128

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 2/117 (1%)

Query: 253 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-GPEDKNAVLELTYNH 311
           +    + V D+ +++ FY+K            P  +  +        +    V       
Sbjct: 3   ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 62

Query: 312 GVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                      A     T  V K    +  +G +   +P        +     DPDG
Sbjct: 63  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 118

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 21/127 (16%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H+   V D+             F  +  G+     R        +         +   + 
Sbjct: 6   HLNLTVADVVAAR--------EFLEKYFGLTCSGTRGNAFAVMRD---------NDGFIL 48

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 236
                   +Y      G    + E V K    +K  G  V          +    ++E P
Sbjct: 49  TLMKGKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAP 104

Query: 237 DGYKFEL 243
            G+  E+
Sbjct: 105 GGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 38.2 bits (87), Expect = 3e-04
 Identities = 18/113 (15%), Positives = 28/113 (24%), Gaps = 13/113 (11%)

Query: 256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 315
           + L V D+  A  F +K FG+     R N                              +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFI---------LTLMKGKEVQ 57

Query: 316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           Y K           + V K  + +K  G  +          +        P G
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGG 106

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 20/144 (13%)

Query: 113 RRMLHVVYRV--GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED 170
           + + H+ + V  G +             FY +    +  R  DI  +            D
Sbjct: 4   KVIDHLTHNVYRGRMVYWA--------NFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD 55

Query: 171 SHFVVELTYNYGVDKYDIG--------TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP 222
               + L          I          G  H     +D+ KT D +K  G +      P
Sbjct: 56  GMIRIPLNEESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAP 113

Query: 223 VKGGNTVIAFIEDPDGYKFELLER 246
                 ++       G   + L+ 
Sbjct: 114 PDTYYEMLEGRLPDHGEPVDQLQA 137

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 8/101 (7%)

Query: 258 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--- 314
           +  G +    NFY+K F     R  D       +        D    + L          
Sbjct: 13  VYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQ 72

Query: 315 -----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 350
                    G G   +A  TDD+ KT +A+K  G +    P
Sbjct: 73  IEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP 113

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 47.3 bits (111), Expect = 2e-07
 Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 22/133 (16%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSH 172
            R+ ++ + V D+             F T+ +G+               A          
Sbjct: 3   ERLGYLGFAVKDVPAWD--------HFLTKSVGLM------AAGSAGDAALYRADQRAWR 48

Query: 173 FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 232
             V+        + D     G        + +  D ++  G   TR    +     V+  
Sbjct: 49  IAVQ------PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGL 102

Query: 233 I--EDPDGYKFEL 243
           +  +DP G   E+
Sbjct: 103 LCLQDPFGLPLEI 115

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 47.8 bits (113), Expect = 5e-07
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 18/138 (13%)

Query: 260 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM---------GYGPEDKNAVLELTYN 310
           V +L  A  ++    G     +    D     + +                N  +  T  
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 311 HGVT----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDP 366
                   ++  G G   +A+ +DDV +T   ++        E    P      +   D 
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP-----TSDYYDG 131

Query: 367 DGWKSVFVDNLDFLKELE 384
              ++  V     +KE +
Sbjct: 132 VRRRAGDVLTEAQIKECQ 149

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 33/147 (22%)

Query: 113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYT---NAFLGYG 167
            R  H+V  V +L             ++    G     +    +     +   +  L   
Sbjct: 8   SRFDHIVGNVPELAPAA--------AYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN 59

Query: 168 PEDSHFVV-ELTYNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE 219
            E+    + E  +             +  G G  H  +A +DV +T+  ++A+      E
Sbjct: 60  SENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE 119

Query: 220 PGPVKGGNTVIAFIEDPDGYKFELLER 246
                       F+  P    ++ + R
Sbjct: 120 ------------FMAPPTSDYYDGVRR 134

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 46.7 bits (110), Expect = 5e-07
 Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 17/126 (13%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
           H V  V D  K +         FYTE LG  L    DI     T+    +   +      
Sbjct: 13  HFVRCVPDTAKAM--------AFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTI 64

Query: 177 LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 233
               + + K        HF +     +DV    D + A G   +   G      T+  + 
Sbjct: 65  ALAAFPIPK-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYA 118

Query: 234 EDPDGY 239
           + P   
Sbjct: 119 DTPSPM 124

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 261 GDLDRAINFYKKAFGMELLRKRDNPDYK------YTIAVMGYGPEDKNAVLELTYNHGVT 314
           G ++  + FY K  G   +++    D         +  V     + K  + E       +
Sbjct: 17  GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKS 76

Query: 315 ------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 350
                 E+  G G   IA+ T D+ +T   ++ +G +    P
Sbjct: 77  QIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 261 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP-EDKNAVLELTYNHGVT----- 314
            +++ A  +Y K          D+       + +      +    +++  N         
Sbjct: 35  QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKS 94

Query: 315 ------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 350
                 +Y+ G G   IA+ T+D+  T   ++  G +    P
Sbjct: 95  QIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 16/123 (13%), Positives = 38/123 (30%), Gaps = 24/123 (19%)

Query: 113 RRMLHVVYRV--GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE--DRYTNAFLGYGP 168
             + H+V      +++            +Y + L        D  +    Y+ +      
Sbjct: 23  EIIDHIVGNQPDQEMESAS--------EWYLKNLQFHRFWSVDDTQVHTEYS-SLRSIVV 73

Query: 169 EDSHFVVELTYNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 217
            +    +++  N                Y+ G G  H  +  ED+  T+  ++ +G +  
Sbjct: 74  ANYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFL 133

Query: 218 REP 220
             P
Sbjct: 134 AVP 136

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 43.8 bits (102), Expect = 3e-06
 Identities = 16/128 (12%), Positives = 27/128 (21%), Gaps = 16/128 (12%)

Query: 116 LHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 175
              V    D+ + +         F+T+ LG   +   D        A +           
Sbjct: 6   AVPVLTARDVAEAV--------EFWTDRLGFSRVFVED------DFAGVVRDDVTLFISA 51

Query: 176 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 235
                   +        G   +  E         +   G    E      G      + D
Sbjct: 52  VQDQVVPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRD 109

Query: 236 PDGYKFEL 243
           P G     
Sbjct: 110 PAGNCVHF 117

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 41.5 bits (96), Expect = 2e-05
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
           +L   D+  A+ F+    G   +   D+        V  +    ++ V+       V   
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVR 68

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                     +  +     +   + + G    E    P    +  A  DP G
Sbjct: 69  G------LDELYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAG 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 43.3 bits (101), Expect = 3e-06
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 20/129 (15%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE 176
            +   V ++ +         C      L  K         D   + F  +       ++ 
Sbjct: 5   QLDIIVSNVPQV--------CADLEHILDKKA--------DYANDGFAQFTIGSHCLML- 47

Query: 177 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 236
            + N+ V   +  +G     I VEDV +    +   G KV   P     G      ++ P
Sbjct: 48  -SQNHLVPLENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGP 104

Query: 237 DGYKFELLE 245
            G   +   
Sbjct: 105 AGLVLDFYR 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 42.1 bits (98), Expect = 9e-06
 Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 314
           Q+ + V ++ +     +     +        +  +            +  L L+ NH V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY----ANDGFAQ------FTIGSHCLMLSQNHLVP 54

Query: 315 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
             +  +G   I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 55  LENFQSGII-IHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 106

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.6 bits (99), Expect = 9e-06
 Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 9/121 (7%)

Query: 255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTI-------AVMGYGPEDKNAVLEL 307
            +++    +  A+ FYK AFG         P  K          + +         V ++
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDV 68

Query: 308 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 367
           +   G +            +GT D          +G                     DP 
Sbjct: 69  SSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE-LGFKGKVTDPF 127

Query: 368 G 368
           G
Sbjct: 128 G 128

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 14/136 (10%), Positives = 27/136 (19%), Gaps = 17/136 (12%)

Query: 117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPE 169
            ++     +   +         FY    G         P+           ++ L     
Sbjct: 10  MLLVEAQKVGDAVT--------FYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS 61

Query: 170 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 229
                   +          G+G     +  +D    V      G                
Sbjct: 62  SFVVCDVSSLPGFSTAKSEGSGVTFL-LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK 120

Query: 230 IAFIEDPDGYKFELLE 245
              + DP G  +   E
Sbjct: 121 -GKVTDPFGVTWIFAE 135

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 9/68 (13%), Positives = 18/68 (26%), Gaps = 2/68 (2%)

Query: 189 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 248
           G         V+D  K  +     G +              +  I+   G    L++R  
Sbjct: 71  GPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLYLIDRFG 128

Query: 249 TPEPLCQV 256
               +  +
Sbjct: 129 EGSSIYDI 136

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 22/132 (16%), Positives = 38/132 (28%), Gaps = 28/132 (21%)

Query: 121 RVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 180
              D D T          FY   LG  +              F   G         +   
Sbjct: 9   PSRDFDSTA--------AFYER-LGFGI-------------VFRDAGWMILQRGDLMLEF 46

Query: 181 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV------IAFIE 234
           +     D    +    + ++D+A+     K+ G + T    P      +      +A + 
Sbjct: 47  FAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALV 106

Query: 235 DPDGYKFELLER 246
           DPDG    L++ 
Sbjct: 107 DPDGTLLRLIQN 118

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 12/97 (12%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 260 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM------GYGPEDKNAVLEL------ 307
           V +L  A+ +     G     +    D     + +               + E       
Sbjct: 30  VPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKR 89

Query: 308 -TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSG 343
            +      E+++G G   +A+ ++D+++T   ++   
Sbjct: 90  KSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 38.2 bits (87), Expect = 3e-04
 Identities = 13/112 (11%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 316
           +L   D+   ++F+    G E      +        +  +    ++ ++    +  +   
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVT 69

Query: 317 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
           D    + +           +     + G      G  P    +  A  DP G
Sbjct: 70  DPDALHEE------WARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAG 113

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 15/132 (11%), Positives = 27/132 (20%), Gaps = 16/132 (12%)

Query: 112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS 171
           K      V    D+   +         F+ + LG +                  +     
Sbjct: 3   KFLGAVPVLTAVDVPANV--------SFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTE 54

Query: 172 HFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 231
           H +V    +  ++  D       +                  G      G    G     
Sbjct: 55  HQIVADNTSAWIEVTDPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--F 106

Query: 232 FIEDPDGYKFEL 243
            + DP G     
Sbjct: 107 AVRDPAGNCVHF 118

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 18/118 (15%), Positives = 30/118 (25%), Gaps = 12/118 (10%)

Query: 261 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT--------YNHG 312
           G+   A + Y +  G  L       D      +     +DK     L          ++ 
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 313 VTEYDKGNGYAQIAIGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 368
                +G     I++  D     +        GG +    GP            D  G
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTF-WAASFGMFTDRFG 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.81
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.77
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.76
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.75
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.75
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.75
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.73
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.73
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.72
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.72
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.7
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.7
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.7
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.69
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.69
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.69
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.68
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.67
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.67
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.67
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.67
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.66
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.65
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.65
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.65
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.64
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.63
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.62
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.62
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.62
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.6
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.6
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.6
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.6
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.59
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.59
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.59
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.59
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.59
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.58
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.57
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.57
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.57
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.56
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.55
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.54
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.54
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.52
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.52
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.48
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.43
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.42
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.4
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.38
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.33
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.32
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.3
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.3
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.16
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.13
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.04
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.0
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.96
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.92
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.82
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.79
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.79
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.78
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.76
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.75
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.55
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.45
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.44
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.42
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.97
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.84
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.06
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.75

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=3.3e-19  Score=145.60  Aligned_cols=129  Identities=57%  Similarity=1.062  Sum_probs=101.8

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      ||+.|++|.|+|+++|+        +||+++|||++..+...+...+..+++...........+............+.+.
T Consensus         1 Mkl~Hv~i~V~Dl~~s~--------~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSI--------DFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAY   72 (135)
T ss_dssp             CCEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSE
T ss_pred             CcceEEEEEcCCHHHHH--------HHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccc
Confidence            58999999999999999        9999999999988776666666566655433333333344444444444556788


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .|+++.+++++.+.++++++|..+..+|...+.++.+++|++|||||+|||+|..+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~  129 (135)
T d1f9za_          73 GHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             eeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCc
Confidence            999999999999999999999999988877777788889999999999999998754

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=4.8e-18  Score=138.51  Aligned_cols=131  Identities=47%  Similarity=0.872  Sum_probs=96.8

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      ++.||.|.|+|+++|++||+++|||++..+.....................................+.+..|+++.+++
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHH
Confidence            58899999999999999999999999987766555555555544333323333333333333333455688999999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccccc
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  382 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~~~  382 (384)
                      ++.+.++++++|..+..+|...+++..+++||+|||||.|||+|.++--|.
T Consensus        82 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~  132 (135)
T d1f9za_          82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC------
T ss_pred             HHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcccc
Confidence            999999999999999988877776656889999999999999998764443

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.76  E-value=9.6e-18  Score=139.90  Aligned_cols=126  Identities=21%  Similarity=0.286  Sum_probs=94.5

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCC-----------CCceEEEEEeeCCCCccEEEEE
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVEL  177 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel  177 (384)
                      +...+||+||+|.|+|+++++        +||++ |||++..+....           ......+++....  ....+++
T Consensus         4 ~~~~~ri~Hv~i~v~Dle~s~--------~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l   72 (149)
T d1ss4a_           4 KNKLLRMDNVSIVVESLDNAI--------SFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIEL   72 (149)
T ss_dssp             TCCEEEEEEEEEECSCHHHHH--------HHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEE
T ss_pred             CCCCCEEeEEEEEeCCHHHHH--------HHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc--cceEEEE
Confidence            345679999999999999999        99998 999988765322           2334566666432  2334555


Q ss_pred             Ee---cCCC----CCCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          178 TY---NYGV----DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       178 ~~---~~~~----~~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      ..   ....    .......|+.|++|.|+|+++++++|+++|+++..+|.... ++.+.+|++||||+.|||+|+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          73 SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             EEEEESCCCCBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEE
T ss_pred             EeeccccCcccccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECC-CCeEEEEEECCCCCEEEEEEc
Confidence            32   1111    11123358999999999999999999999999988886655 466788999999999999986

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.75  E-value=4.3e-18  Score=136.80  Aligned_cols=115  Identities=19%  Similarity=0.155  Sum_probs=89.1

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      |++.|+.|.|+|+++|+        +||+++||+++....+    .  .+.+..|    ...+.+......+....+.| 
T Consensus         1 m~l~~i~i~V~di~~a~--------~FYe~~lg~~~~~~~~----~--~~~~~~g----~~~l~l~~~~~~~~~~~~~~-   61 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVC--------ADLEHILDKKADYAND----G--FAQFTIG----SHCLMLSQNHLVPLENFQSG-   61 (115)
T ss_dssp             CEEEEEEEECSCHHHHH--------HHHHHHHTSCCSEEET----T--EEEEEET----TEEEEEESSCSSSCCCCCSC-
T ss_pred             CcceEEEEEECCHHHHH--------HHHHHhhCCceeeecC----C--eEEEEEc----CceeeeeecccCCCCCCCcc-
Confidence            57999999999999999        9999999999854432    2  4556655    23455554433333333334 


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .+++|.|+|+++++++|+++|+++..+|...++ +.+.++++|||||.|||.|.+
T Consensus        62 ~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          62 IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEECC
T ss_pred             eEEEEEECCHHHHHHHHHhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEeC
Confidence            479999999999999999999999998877764 456788999999999999864

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.75  E-value=1.1e-17  Score=142.78  Aligned_cols=147  Identities=18%  Similarity=0.227  Sum_probs=105.7

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+|++||+|.|+|+++++        +||+++|||++..+...+.......++..+... .... ....      ....+
T Consensus         3 ~~rldHv~l~v~Dle~s~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~------~~~~~   66 (162)
T d1mpya2           3 AVRFDHALMYGDELPATY--------DLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA-HDVA-FIHH------PEKGR   66 (162)
T ss_dssp             CCEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS-CSEE-EEEC------SSSSE
T ss_pred             cccccEEEEECCCHHHHH--------HHHHHccCCEEEEEEccccccceeeeeeccccc-cccc-cccc------CCCCc
Confidence            468999999999999999        999999999998776666655555666544322 2122 2211      12347


Q ss_pred             ceEEEEEECCHH---HHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCC-ceeeeeecCChHHHH
Q 016689          192 FGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP-LCQVMLRVGDLDRAI  267 (384)
Q Consensus       192 ~~hi~~~v~Dv~---~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~-~~hV~L~V~Dle~s~  267 (384)
                      +.|+++.+.+++   +++++|+++|+++..+|.....+...++||+|||||+|||+...+...+ ..-+........+++
T Consensus        67 ~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~  146 (162)
T d1mpya2          67 LHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAI  146 (162)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHH
T ss_pred             cceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCcee
Confidence            899999998755   6789999999999888877766777899999999999999987653211 122233446666666


Q ss_pred             HHHHHhh
Q 016689          268 NFYKKAF  274 (384)
Q Consensus       268 ~FY~~vL  274 (384)
                      .||...|
T Consensus       147 ~~~~r~l  153 (162)
T d1mpya2         147 FYHDRIL  153 (162)
T ss_dssp             CTTTCSC
T ss_pred             EecCCCC
Confidence            6665433

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.75  E-value=2.7e-17  Score=136.85  Aligned_cols=127  Identities=15%  Similarity=0.159  Sum_probs=91.6

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCC-
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-  189 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g-  189 (384)
                      ..+|+||+|.|+|+++++        +||+++|||++..+....+. ....++.+.+....+..+.+.......+...+ 
T Consensus         4 i~gl~Hv~l~v~Dl~~s~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~   75 (144)
T d1zswa1           4 IKGHHHISMVTKNANENN--------HFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGT   75 (144)
T ss_dssp             CCSEEEEEEEESCHHHHH--------HHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCB
T ss_pred             ccceeeEEEEeCCHHHHH--------HHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCC
Confidence            468999999999999999        99999999999877543332 22333444333333445555544333333333 


Q ss_pred             CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          190 TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       190 ~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .++.|++|.|+|   ++++.++|+++|+.+.. +...  ++...+||+|||||.|||++..+.
T Consensus        76 ~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~-~~~~--~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          76 NAITRIGLLVPSEDSLHYWKERFEKFDVKHSE-MTTY--ANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHHTTCEECC-SEEE--TTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CceeEEEEecCCchhHHHHhhhhhccceeeeC-cccc--CCeEEEEEECCCCCEEEEEEeCCC
Confidence            468999999998   67788999999998753 3333  356788999999999999988654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.73  E-value=1.7e-17  Score=133.24  Aligned_cols=114  Identities=19%  Similarity=0.142  Sum_probs=88.7

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      .+.|+.|.|+|+++|++||+++||+++....+    ++..  +..+    ...+.+......+....+.+ .+++|.|+|
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~--~~~g----~~~l~l~~~~~~~~~~~~~~-~~~~f~v~D   70 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQ--FTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVED   70 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEE--EEET----TEEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEE--EEEc----CceeeeeecccCCCCCCCcc-eEEEEEECC
Confidence            37899999999999999999999999865432    2433  3333    45566665444332233334 589999999


Q ss_pred             HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          332 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       332 vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +++++++++++|+++..+|...+++ .+.+||+|||||.|||++.+
T Consensus        71 ~d~~~~~l~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          71 VDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEECC
T ss_pred             HHHHHHHHHhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEeC
Confidence            9999999999999999999888876 37899999999999999853

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.73  E-value=2.9e-17  Score=135.98  Aligned_cols=131  Identities=18%  Similarity=0.289  Sum_probs=95.4

Q ss_pred             ccccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEee--CCCCccEEEEEEecCCCC--
Q 016689          109 KSDKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGY--GPEDSHFVVELTYNYGVD--  184 (384)
Q Consensus       109 ~~~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~--g~~~~~~~lel~~~~~~~--  184 (384)
                      ++|.++|+||+|.|+|+++|+        +||+++|||++......+......++...  ........+++.......  
T Consensus         2 ~~m~~~i~Hi~i~v~Dl~~a~--------~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~   73 (145)
T d1jc4a_           2 EDLFICIDHVAYACPDADEAS--------KYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDEST   73 (145)
T ss_dssp             CCCCSEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSH
T ss_pred             cccceEEeEEEEEeCCHHHHH--------HHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCc
Confidence            467889999999999999999        99999999998877655554444444321  112234566665532221  


Q ss_pred             ------CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEE--ECCCCCEEEEeecC
Q 016689          185 ------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLERG  247 (384)
Q Consensus       185 ------~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~--~DPdG~~iel~~~~  247 (384)
                            +.....|+.|+||.|+|+++++++|+++|+++..++.....++.+.+|+  +||+|+.|||+|..
T Consensus        74 ~~~~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          74 VAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             HHHHHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             ccccccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence                  1234568999999999999999999999999876543333345556666  79999999999963

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.72  E-value=4.8e-17  Score=135.57  Aligned_cols=123  Identities=17%  Similarity=0.248  Sum_probs=91.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecC-----------CCCcEEEEEeecCCCCcceEEEEec---cCCCcc--
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAVLELTY---NHGVTE--  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~lel~~---~~~~~~--  315 (384)
                      +++||.|.|+|+++|++||++ |||++..+...           .+....+.++.....  ...+++.+   ......  
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~~~   85 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADHR   85 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBCT
T ss_pred             EEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCccccc
Confidence            689999999999999999998 99998765432           233455666654332  33344332   222111  


Q ss_pred             --ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          316 --YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       316 --~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                        .....|..|++|.|+|+++++++|++.|+++..+|...+++ .+.+|++||||+.|||+|..+
T Consensus        86 ~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~e~~~  149 (149)
T d1ss4a_          86 TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEELG  149 (149)
T ss_dssp             TCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEECC
T ss_pred             ccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCC-eEEEEEECCCCCEEEEEEccC
Confidence              12235889999999999999999999999999888766654 478999999999999999753

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.6e-17  Score=140.16  Aligned_cols=127  Identities=32%  Similarity=0.532  Sum_probs=95.2

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCC-----------------ccEEE
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-----------------SHFVV  175 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~-----------------~~~~l  175 (384)
                      .+++|++|.|+|+++|+        +||+++|||++......+..++..++...+...                 ....+
T Consensus        22 ~~l~Hi~l~V~Dl~~si--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSL--------DFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLEL   93 (176)
T ss_dssp             CEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEE
T ss_pred             eEEeEEEEEeCCHHHHH--------HHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeE
Confidence            47999999999999999        999999999998888777777777777543211                 01111


Q ss_pred             EEEecC---CCC----CCcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          176 ELTYNY---GVD----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       176 el~~~~---~~~----~~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ......   ...    ......|+.|+++.++|+++++++|+++|+++..+|....  ...++|++|||||.|||+|+..
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_          94 THNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             EEETTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTT
T ss_pred             EEeeccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCC
Confidence            111111   111    1123359999999999999999999999999999876533  3345789999999999999875


Q ss_pred             C
Q 016689          249 T  249 (384)
Q Consensus       249 ~  249 (384)
                      -
T Consensus       172 ~  172 (176)
T d1qipa_         172 M  172 (176)
T ss_dssp             G
T ss_pred             C
Confidence            4

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=1e-16  Score=132.51  Aligned_cols=118  Identities=22%  Similarity=0.316  Sum_probs=89.8

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEE
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  197 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~  197 (384)
                      |++.|+|+++++        +||+++|||++..+...+ ..+..+++..+  .....++++...+......+.+..|++|
T Consensus        13 Va~pv~Dle~s~--------~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_          13 IARPTGQLDEII--------RFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             EEEECSCHHHHH--------HHHTTTSCCCEEEEEEEE-TTEEEEEEESS--SSSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             EecccCCHHHHH--------HHHHhccCCceeeeeccc-cceeEEEecCC--CCceeeecccccccccccccccCceEEE
Confidence            444558999999        999999999998765433 34567777754  3356677777666555555667899999


Q ss_pred             EECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          198 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       198 ~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .|+|   +++++++|+++|+++..++.+..  +.+.+||+|||||+|||++...
T Consensus        82 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~--~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          82 YVPNAVELAAITSKLKHMGYQEVESENPYW--SNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCCEECCSSHHH--HSSEEEEECTTCCEEEEESSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEeCCCCCCC--CceEEEEECCCCCEEEEEcCCC
Confidence            9887   77788999999999987665432  3446789999999999997654

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.70  E-value=2.1e-16  Score=128.91  Aligned_cols=122  Identities=54%  Similarity=0.913  Sum_probs=91.5

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      +|+.||+|.|+|+++|+        +||+++|||++..+...+.......+...........................+.
T Consensus         2 ~r~~Hv~l~V~Dl~~s~--------~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSI--------KFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAY   73 (139)
T ss_dssp             CEEEEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSE
T ss_pred             CceEEEEEEeCCHHHHH--------HHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCcc
Confidence            68999999999999999        9999999999988766555555555554433222222222233333334455678


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          193 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       193 ~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      .|+++.++++.+.++++.+.++++..++.     +.+++||+|||||+|||++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          74 GHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHH
T ss_pred             ceeeeehhhHHHHHHHHHHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECC
Confidence            88999999999999999999998876543     456789999999999999865

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.70  E-value=2.2e-16  Score=131.17  Aligned_cols=125  Identities=14%  Similarity=0.095  Sum_probs=90.3

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-CcEEEEEeecCCCCcceEEEEeccCCCccccC-CCceeEEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK-GNGYAQIAIG  328 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~-g~g~~hiaf~  328 (384)
                      ..|+||.|.|+|+++|++||+++|||++..+....+ ......+.+.........+.+.......+... .+++.|++|.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            479999999999999999999999999886654322 22333444443333455566554433322222 3468999999


Q ss_pred             cCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          329 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       329 VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      |+|   ++++.+++++.|+.+. ++....+  ++.+||+|||||.|||+++.+
T Consensus        85 v~~~~~l~~~~~~l~~~gv~~~-~~~~~~~--~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          85 VPSEDSLHYWKERFEKFDVKHS-EMTTYAN--RPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEEC-CSEEETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             cCCchhHHHHhhhhhccceeee-CccccCC--eEEEEEECCCCCEEEEEEeCC
Confidence            988   6778899999999874 3444444  578999999999999999764

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.69  E-value=8.3e-17  Score=132.23  Aligned_cols=112  Identities=21%  Similarity=0.249  Sum_probs=87.4

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      +++|+||+|.|+|+++++        +||+++|||++..+.+      ..+++..+.  .++.+.+...       ...+
T Consensus         2 I~~l~hv~i~V~Dl~~s~--------~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~-------~~~~   58 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWR--------SFLTQKLGLMEAGTTD------NGDLFRIDS--RAWRIAVQQG-------EVDD   58 (131)
T ss_dssp             EEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEET------TEEEEESSS--BSCSEEEEEC-------TTCE
T ss_pred             cccccEEEEEeCCHHHHH--------HHHHHhhCCceeecCC------cceEEeecC--CceEEEEecC-------CCCC
Confidence            357999999999999999        9999999999986542      256777653  3445555432       2358


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCcccc--CCCEEEEEEECCCCCEEEEeec
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~--~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +.|++|.|.+   ++++.++|+++|+++...|....  .+....+||+|||||+||++..
T Consensus        59 ~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          59 LAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            8999999964   67789999999999998775432  2455688999999999999864

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.69  E-value=6.3e-17  Score=133.74  Aligned_cols=122  Identities=19%  Similarity=0.304  Sum_probs=89.8

Q ss_pred             Cceeeeee----cCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEE
Q 016689          252 PLCQVMLR----VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~----V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      .|.|+.++    |+|+++|++||+++|||++..+...+. .+.+.++..+.  ....+.+....+......+.+..|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEE
Confidence            34555554    579999999999999999987654433 35666665433  356666766555544444566789999


Q ss_pred             EcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          328 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      .|++   +++++++|+++|++++.++.+..+  .+.+||+|||||.|||+++.+
T Consensus        82 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          82 YVPNAVELAAITSKLKHMGYQEVESENPYWS--NGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCCEECCSSHHHH--SSEEEEECTTCCEEEEESSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEeCCCCCCCC--ceEEEEECCCCCEEEEEcCCC
Confidence            9876   778899999999999876653322  467899999999999998764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.69  E-value=1.7e-16  Score=129.45  Aligned_cols=119  Identities=17%  Similarity=0.239  Sum_probs=85.6

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-ceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      |+.+|+||+|.|+|+++++        +||+++|||++..+.+.... .....++..+    ...+.+......    ..
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~--------~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~   64 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMT--------RILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEKL----AE   64 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHH--------HHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCCC----SS
T ss_pred             CCCcEeEEEEEeCCHHHHH--------HHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeecccccc----cc
Confidence            5668999999999999999        99999999999876543321 2334555543    334444432221    23


Q ss_pred             CCceEEEEEEC--CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          190 TGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       190 ~g~~hi~~~v~--Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .+..|++|.|+  |+++++++|+++|+++..++.... +..+.+||+|||||+|||...
T Consensus        65 ~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          65 RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            46778999775  799999999999999876654333 455678999999999999764

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=1.2e-16  Score=133.58  Aligned_cols=116  Identities=22%  Similarity=0.272  Sum_probs=88.1

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+||+||.|.|+|+++++        +||+++|||++.....      ..+++.......++.+.+...       ...+
T Consensus        14 i~rl~hv~l~v~Dl~~s~--------~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~   72 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSR--------EFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAA   72 (146)
T ss_dssp             EEEEEEEEEEESCHHHHH--------HHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCE
T ss_pred             CcEEeEEEEEeCCHHHHH--------HHHHhccCcEEEeecC------Cceeeecccccccceeecccc-------CCCC
Confidence            469999999999999999        9999999999976532      123333222222333333332       2357


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +.|+++.+.   |+++++++|+++|+.+...+.....|..+.+||+|||||+|||+...+
T Consensus        73 ~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          73 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             CceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence            899999997   588899999999999988776666666678899999999999987644

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=2.5e-16  Score=134.10  Aligned_cols=120  Identities=12%  Similarity=0.147  Sum_probs=90.7

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      -+++||.|.|+|++++++||+++|||++.++...........+....... .... ...      ....++..|++|.+.
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~------~~~~~~~~h~~~~~~   75 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA-HDVA-FIH------HPEKGRLHHVSFHLE   75 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS-CSEE-EEE------CSSSSEEEEEEEECS
T ss_pred             ccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccc-cccc-ccc------cCCCCccceeEEEEe
Confidence            36999999999999999999999999998776666555555555443321 1121 111      123457899999997


Q ss_pred             CHH---HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          331 DVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       331 Dvd---~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +++   ++.++|++.|+++..+|.....+..+++||+|||||.|||+...+
T Consensus        76 ~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          76 TWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            655   678999999999988887766555689999999999999997543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.4e-16  Score=134.62  Aligned_cols=125  Identities=26%  Similarity=0.458  Sum_probs=92.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCC-----------------cceEEEEeccCCC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED-----------------KNAVLELTYNHGV-  313 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~~lel~~~~~~-  313 (384)
                      .++|+.|.|+|+++|++||+++|||++..+...+.....+.+...+...                 ....+........ 
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD  102 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccc
Confidence            5999999999999999999999999998777666666666666543211                 0111111111110 


Q ss_pred             --ccc----cCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          314 --TEY----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       314 --~~~----~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                        ...    ....++.|++|.|+|+++++++|+++|+++..+|...++  .+++||+|||||.|||+|+..
T Consensus       103 ~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         103 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             TTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTT
T ss_pred             cCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCC
Confidence              011    123488999999999999999999999999998865444  467899999999999999763

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.67  E-value=4.5e-16  Score=133.68  Aligned_cols=120  Identities=22%  Similarity=0.207  Sum_probs=84.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+|+||+|.|+|+++++        +||+++|||++..+.+    .+ .+|...+... ...+.+.....+.......+
T Consensus        10 I~Gl~HV~L~V~Dle~s~--------~FY~~vLG~~~~~~~~----~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   75 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMA--------STLTEIFGYTEVSRND----QE-AIFQSIKGEA-FGEIVVKYLDGPTEKPGRGS   75 (170)
T ss_dssp             CCEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEECS----SE-EEEESSTTCS-TTCEEEEECCSSBCBCCBTC
T ss_pred             hCCeeeEEEEeCCHHHHH--------HHHHHHhCCEEEeecC----ce-EEEEeccCcc-ceEEEeccccccccccCccc
Confidence            458999999999999999        9999999999986532    22 3343322222 22233333222222223347


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +.|++|.|+|   +++++++++++|+++.. +..  .+..+.+||+|||||+|||....|
T Consensus        76 l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~--~~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          76 IHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IID--RFYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEE--CSSEEEEEEECTTCCEEEEEEEEE
T ss_pred             cceEEEEeCChHHHHHHHHHHHhcCCCccc-ccc--CCCEEEEEEECCCCcEEEEEECCC
Confidence            8999999987   77789999999999753 322  356778899999999999997643

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.67  E-value=2.2e-16  Score=125.33  Aligned_cols=108  Identities=21%  Similarity=0.290  Sum_probs=80.0

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      |+|+||.|.|+|+++++        +||+++|||++..+.+   +.  .+++..+  . +..+.+......    ...+.
T Consensus         2 m~i~Hi~l~v~Dl~~a~--------~FY~~~lG~~~~~~~~---~~--~~~~~~~--~-~~~~~~~~~~~~----~~~~~   61 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAR--------EFLEKYFGLTCSGTRG---NA--FAVMRDN--D-GFILTLMKGKEV----QYPKT   61 (113)
T ss_dssp             CCCCEEEEEESCHHHHH--------HHHHHHHCCEEEEEET---TT--EEEEECT--T-CCEEEEEECSSC----CCCTT
T ss_pred             CcccEEEEEeCCHHHHH--------HHHHHhhCCEEEEeec---Cc--ceeeeec--c-eeeeeeeeeecc----ccccc
Confidence            68999999999999999        9999999999976542   22  3444422  2 344555443222    23467


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      .|++|.|+|   +++++++++++|+++...|.    +..+.+|++|||||+|||.
T Consensus        62 ~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          62 FHVGFPQESEEQVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEE
T ss_pred             ceeeeeeccccchhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEE
Confidence            899999987   67789999999999765543    2456789999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.67  E-value=4.6e-16  Score=128.67  Aligned_cols=115  Identities=23%  Similarity=0.353  Sum_probs=84.3

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |+.+|+||+|.|+|+++++        +||+++|||++......      ..++..+  +....+.+.... ........
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~--------~FY~~vLG~~~~~~~~~------~~~~~~~--~~~~~l~~~~~~-~~~~~~~~   63 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSV--------TFWHELLGLTLHARWNT------GAYLTCG--DLWVCLSYDEAR-QYVPPQES   63 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHH--------HHHHTTSCCEEEEEETT------EEEEEET--TEEEEEEECTTC-CCCCGGGS
T ss_pred             CCCcEeEEEEEeCCHHHHH--------HHHHHHhCCEEEEEecc------ccccccc--cccceeeccccc-ccCCCcCC
Confidence            5678999999999999999        99999999999765421      3444443  223333332222 22222335


Q ss_pred             CceEEEEEE--CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          191 GFGHFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       191 g~~hi~~~v--~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +..|++|.+  +|+++++++|+++|+++...+.    +.++.+||+|||||.|||...
T Consensus        64 ~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          64 DYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CSCEEEEECCHHHHHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             ccceeeeechHHHHHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEEC
Confidence            778888887  5799999999999999887653    345678999999999999764

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.67  E-value=2e-16  Score=130.12  Aligned_cols=113  Identities=16%  Similarity=0.202  Sum_probs=87.0

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      ..+|+||+|.|+|+++++        +||+++|||++..+..      ..+|+..+.  .++.+.+...       ...+
T Consensus         2 i~~L~hv~i~v~Dl~~s~--------~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~l~~~~~-------~~~~   58 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWD--------HFLTKSVGLMAAGSAG------DAALYRADQ--RAWRIAVQPG-------ELDD   58 (132)
T ss_dssp             CCEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEET------TEEEEESSS--BSCSEEEEEC-------TTCE
T ss_pred             cccccEEEEEeCCHHHHH--------HHHHHHhCCceecccc------ceeeeeeee--cceeeeeecc-------CCCC
Confidence            358999999999999999        9999999999876542      256777643  2334444432       2358


Q ss_pred             ceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecC
Q 016689          192 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       192 ~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +.|++|.|++   ++++.++|+++|+++.+.+.....  +....+||+|||||+|||+...
T Consensus        59 ~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          59 LAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            8999999964   788999999999999987754431  3456789999999999998653

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.66  E-value=4.1e-16  Score=127.10  Aligned_cols=125  Identities=40%  Similarity=0.708  Sum_probs=90.7

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      +++.||.|.|.|+++|++||+++|||++..+..........................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            47899999999999999999999999998776555544444444433222222222222222222334567789999999


Q ss_pred             CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCccc
Q 016689          331 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  380 (384)
Q Consensus       331 Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f~  380 (384)
                      ++...++++...++++..++.    + .+++||+|||||.|||++..+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~----g-~~~~~~~DPdGn~iEl~~~~~~~  126 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYEDE----S-GFMAFVVDPDGYYIELLNEKTMM  126 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEECS----S-SSEEEEECTTSCEEEEEEHHHHH
T ss_pred             hHHHHHHHHHHcCCceeeCCC----C-cEEEEEECCCCCEEEEEECCCCC
Confidence            999999999999998876532    2 47899999999999999976543

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=7.2e-16  Score=126.52  Aligned_cols=112  Identities=22%  Similarity=0.368  Sum_probs=80.4

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      |+.+|+||+|.|+|+++++        +||+++|||++..+.+.      ..++..+    ...+.........  ....
T Consensus         1 mi~~i~Hv~l~v~d~~~~~--------~FY~~~lG~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~--~~~~   60 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASI--------AFYRDLLGFRLEARWDQ------GAYLELG----SLWLCLSREPQYG--GPAA   60 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEEETT------EEEEEET----TEEEEEEECTTCC--CCCS
T ss_pred             CCCcEeEEEEEeCCHHHHH--------HHHHHhhCCeEEEeccc------eeeeecC----CeEEEEeeecccc--cccc
Confidence            5678999999999999999        99999999998766431      3444443    2233333322221  2233


Q ss_pred             CceEEEEEE--CCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          191 GFGHFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       191 g~~hi~~~v--~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      +..|++|.+  +|+++++++|+++|+++...+.    +.++.+||+|||||+|||...
T Consensus        61 ~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~----~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          61 DYTHYAFGIAAADFARFAAQLRAHGVREWKQNR----SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             SSCEEEEEECHHHHHHHHHHHHHTTCCEEECCC----SSSCEEEEECTTCCEEEEESC
T ss_pred             ccccchhccccchHHHHHHHHHHCCCcCccCCC----cceeEEEEECCCCCEEEEEEC
Confidence            556766665  6899999999999999876542    344568999999999999653

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.65  E-value=1.1e-15  Score=132.02  Aligned_cols=119  Identities=20%  Similarity=0.224  Sum_probs=91.9

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+||+||+|.|+|+++++        +|| ++|||++..+...+.+....+|+..+  ..++.+.+...       ...+
T Consensus         3 i~rl~Hv~l~v~Dle~s~--------~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~--~~~~~l~~~~~-------~~~~   64 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGR--------AYL-EDLGFRVSEDIKDSDGVTYAAWMHRK--QTVHDTALTGG-------NGPR   64 (176)
T ss_dssp             CCEEEEEEEEESCHHHHH--------HHH-HHTTCEEEEEEECTTCCEEEEEEESS--SSSCSEEEEES-------SBSE
T ss_pred             eeEeeeEEEEcCCHHHHH--------HHH-HHCCCEEEEEEecCCcceeeeeeccC--ccccceecccc-------cCCC
Confidence            468999999999999999        999 68999998776666666667777754  23445555433       2358


Q ss_pred             ceEEEEEECCHH---HHHHHHHHcCCee--eeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVEDVA---KTVDLVKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~Dv~---~~~~~l~~~G~~~--~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      +.|+++.+.+++   ...++|+++|+.+  ...|..+..+...++|++|||||+||+.....
T Consensus        65 ~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          65 MHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            899999998654   5678999999864  35566666677789999999999999987653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.65  E-value=7.4e-16  Score=127.34  Aligned_cols=126  Identities=15%  Similarity=0.179  Sum_probs=90.1

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeec--CCCCcceEEEEeccCCCcc--------ccCCC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY--GPEDKNAVLELTYNHGVTE--------YDKGN  320 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~lel~~~~~~~~--------~~~g~  320 (384)
                      .+|+||.|.|+|+++|++||+++||+++......+..+........  ........+++.+......        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            4699999999999999999999999998876655544443333221  1123355666655332221        12346


Q ss_pred             ceeEEEEEcCCHHHHHHHHHHCCCeEecCC-ccCCCCCceEEEE--ECCCCCeEEEEecC
Q 016689          321 GYAQIAIGTDDVYKTAEAIKLSGGKITREP-GPLPGINTKITAC--LDPDGWKSVFVDNL  377 (384)
Q Consensus       321 g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p-~~~~~~~~~~~~~--~DPdG~~iElve~~  377 (384)
                      |+.|+||.|+|+++++++|+++|+++..++ ...+++ .+++|+  +||+|+.|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g-~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCC-CEEEEEeccCCCCeEEEEEECC
Confidence            899999999999999999999999987654 322332 245555  79999999999965

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.64  E-value=6.5e-16  Score=128.47  Aligned_cols=117  Identities=23%  Similarity=0.265  Sum_probs=83.8

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCC
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  191 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  191 (384)
                      .+||+||.|.|+|+++++        +||+++|||++..+...  .  ....... ....++...+...       ...+
T Consensus         5 i~rl~Hv~l~v~D~~~s~--------~FY~~vLG~~~~~~~~~--~--~~~~~~~-~~~~~~~~~~~~~-------~~~~   64 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKAL--------EHYVELLGLIEMDRDDQ--G--RVYLKAW-TEVDKFSLVLREA-------DEPG   64 (145)
T ss_dssp             EEEEEEEEEEESCHHHHH--------HHHHHTTCCEEEEECTT--S--CEEEECT-TCCBSCSEEEEEC-------SSCE
T ss_pred             CcEeeeEEEEeCCHHHHH--------HHHHHhhCCEEEEeecc--C--ccceecc-cccceeecccccc-------Cccc
Confidence            579999999999999999        99999999998765321  1  1222222 2222333333332       1235


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          192 FGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       192 ~~hi~~~v~---Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      ..|+++.+.   |+++++++|+++|+++...|.....|..+.+||+|||||+|||++...
T Consensus        65 ~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          65 MDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             ceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            566676655   688899999999999987766555566688999999999999987543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.63  E-value=1.5e-15  Score=130.38  Aligned_cols=117  Identities=18%  Similarity=0.117  Sum_probs=82.8

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      ..++||.|.|.|++++++||+++|||++..+.+    ....+....+..  ...+.+.............+++||+|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA--FGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS--TTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc--ceEEEeccccccccccCccccceEEEEeC
Confidence            469999999999999999999999999986532    233333333222  22233332222222233357899999997


Q ss_pred             C---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          331 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      |   ++++.+++++.|+++. ++..+.+  ++.+||+|||||.|||+..
T Consensus        85 ~~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          85 NDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             ChHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEEC
Confidence            6   7788999999999874 3444333  5789999999999999874

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-15  Score=127.42  Aligned_cols=127  Identities=20%  Similarity=0.311  Sum_probs=94.7

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc--eEEEEEeeCCCCccEEEEEEecCCCCC-----
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR--YTNAFLGYGPEDSHFVVELTYNYGVDK-----  185 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~lel~~~~~~~~-----  185 (384)
                      .+++||+|.|+|+++|+        +||+++|||+++.....+...  ...+.+..+    ...+++........     
T Consensus        10 ~~~dHi~i~V~Dl~~a~--------~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~   77 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAA--------SFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGD   77 (149)
T ss_dssp             EEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHH
T ss_pred             eeEeEEEEEcCCHHHHH--------HHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhh
Confidence            57999999999999999        999999999998776543332  333344432    33455543222111     


Q ss_pred             --CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecCCCCC
Q 016689          186 --YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPTPE  251 (384)
Q Consensus       186 --~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~~~~~  251 (384)
                        ...+.|+.|+||.|+|+++++++|+++|+++..+|.....  |..++++++.|.|..++|+|+....+
T Consensus        78 ~~~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g  147 (149)
T d1sqia1          78 HLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG  147 (149)
T ss_dssp             HHHHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCS
T ss_pred             hhhhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcC
Confidence              1246799999999999999999999999999988866543  33457888999999999999876543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.62  E-value=2.3e-15  Score=122.56  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=81.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC-cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V-  329 (384)
                      .++||.|.|+|++++++||+++|||++..+.+.... .....++..+    ...+.+.....    ....+..|++|.| 
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            489999999999999999999999999866543221 1222333322    34444443221    2234667899977 


Q ss_pred             -CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 -dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                       +|+++++++++++|+++..++...+++ ++.+||+|||||.|||.+..
T Consensus        76 ~~dv~~~~~~l~~~gv~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          76 DADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             GGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHHHHCCCeEecCCcccCCC-EEEEEEECCCCCEEEEEECC
Confidence             579999999999999987665444433 57899999999999997743

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.62  E-value=1.8e-15  Score=128.76  Aligned_cols=126  Identities=22%  Similarity=0.303  Sum_probs=96.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC--ceEEEEEeeCCCCccEEEEEEecCCCCC----
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK----  185 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~----  185 (384)
                      ..+++||+|.|+|+++|+        +||+++|||+++.....+..  ....+.+..+    ...+++........    
T Consensus         5 i~~idHv~i~V~D~~~a~--------~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~   72 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAA--------HYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGH   72 (163)
T ss_dssp             CCEEEEEEEECSCHHHHH--------HHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHH
T ss_pred             CceEeEEEEEeCCHHHHH--------HHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCcccc
Confidence            468999999999999999        99999999999876644332  2344455543    34566654332211    


Q ss_pred             ------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccC--CCEEEEEEECCCCCEEEEeecCCC
Q 016689          186 ------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       186 ------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~--g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                            ...+.|+.|+||.|+|+++++++|+++|+++..+|....+  |..+.+++++|+|..++|+|+...
T Consensus        73 ~~~~~~~~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~  144 (163)
T d1t47a1          73 FLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  144 (163)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             ccchhhhcCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCC
Confidence                  1245799999999999999999999999999988766543  345688999999999999998643

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.60  E-value=4.3e-15  Score=120.78  Aligned_cols=118  Identities=18%  Similarity=0.175  Sum_probs=82.5

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEe-----c-CCCCCCc
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY-----N-YGVDKYD  187 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~-----~-~~~~~~~  187 (384)
                      ||+|++|.|+|+++++        +||++ |||.+......+  .  .+++..+.   ...+.+..     . .......
T Consensus         2 ri~hv~l~V~D~~~s~--------~FY~~-Lg~~~~~~~~~~--~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   65 (128)
T d1klla_           2 RISLFAVVVEDMAKSM--------EFYRK-MGVEIPAEADSA--P--HTEAVLDG---GIRLAWDTVETVRSYDPEWQAP   65 (128)
T ss_dssp             CCCEEEEEESCHHHHH--------HHHHH-TTCCCCTTGGGC--S--EEEEECGG---GCEEEEEEHHHHHHHCTTCCCC
T ss_pred             eEeEEEEEcCCHHHHH--------HHHHH-hCCccccccccc--c--ceeeeccc---eeeeeecccccccccCCCCCCC
Confidence            7999999999999999        99976 899876543322  2  23332221   22333321     1 1111122


Q ss_pred             CCCCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          188 IGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       188 ~g~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                      .+.+..|+++.|+|   +++++++|+++|+++..+|...++ +.+.+|++|||||+|||.++.|
T Consensus        66 ~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          66 TGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             ccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecCC
Confidence            23456789999987   667899999999999988876654 5678899999999999998754

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.60  E-value=3.8e-15  Score=128.55  Aligned_cols=118  Identities=19%  Similarity=0.151  Sum_probs=89.1

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+|+||.|.|+|++++++|| ++|||++.++...+++.....++.....  ++.+.+...       ..++..|++|.+.
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~~-------~~~~~~H~~f~~~   73 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATH   73 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECS
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceecccc-------cCCCccceeEEec
Confidence            47999999999999999999 6899999877766666666666665332  444444432       2358899999997


Q ss_pred             C---HHHHHHHHHHCCCe--EecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          331 D---VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      +   +.++.++++++|+.  +...|+.+..+...++||+|||||.|||....+
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          74 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             cchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            5   45567799999984  456676666555678999999999999988544

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.60  E-value=2.1e-15  Score=125.94  Aligned_cols=113  Identities=17%  Similarity=0.142  Sum_probs=84.9

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      +++||.|.|.|++++++||+++|||++..+..    ... .+... .......+.+...       ..+++.|++|.+. 
T Consensus        16 rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~-~~~~~-~~~~~~~~~~~~~-------~~~~~~h~~~~~~~   82 (146)
T d1f1ua1          16 RCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTI-YLRSL-EEFIHHNLVLRQG-------PIAAVAAFAYRVKS   82 (146)
T ss_dssp             EEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEE-EEECT-TCCSSCSEEEEEC-------SSCEEEEEEEEESS
T ss_pred             EEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cce-eeecc-cccccceeecccc-------CCCCCceeeEeecc
Confidence            59999999999999999999999999976532    122 22222 2222333333321       2357889999995 


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        |++++.++|+++|+++...+.....+.++.+||+|||||.|||+...
T Consensus        83 ~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          83 PAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             chhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence              68889999999999998887766655568899999999999998754

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.60  E-value=5.1e-15  Score=120.30  Aligned_cols=117  Identities=21%  Similarity=0.187  Sum_probs=82.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEecc-----CCC-ccccCCCceeEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-----HGV-TEYDKGNGYAQI  325 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~-----~~~-~~~~~g~g~~hi  325 (384)
                      +|+||.|.|+|+++|++||++ |||.+.......  .+.......     ...+.+...     ... .......+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PHTEAVLDG-----GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SEEEEECGG-----GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cceeeeccc-----eeeeeecccccccccCCCCCCCccccceeE
Confidence            689999999999999999976 899876544322  222222221     223333210     001 111223455799


Q ss_pred             EEEcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          326 AIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       326 af~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|.|++   +++++++++++|+++..+|...+++ .+.+||+|||||.|||+++.
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEecC
Confidence            999976   6778999999999999998887775 48899999999999999863

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.59  E-value=4.5e-15  Score=117.57  Aligned_cols=107  Identities=19%  Similarity=0.170  Sum_probs=78.5

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCC
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  331 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdD  331 (384)
                      +++||.|.|+|++++++||+++|||++..+.+   .. . +++..+   ....+.+.....    ...++..|++|.|+|
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~-~-~~~~~~---~~~~~~~~~~~~----~~~~~~~h~~f~v~~   70 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA-F-AVMRDN---DGFILTLMKGKE----VQYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT-E-EEEECT---TCCEEEEEECSS----CCCCTTCCEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Cc-c-eeeeec---ceeeeeeeeeec----ccccccceeeeeecc
Confidence            58999999999999999999999999976542   22 2 233322   245555554322    123466899999976


Q ss_pred             ---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          332 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       332 ---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                         ++++.++++++|+++..+|.  .+  ++.+||+|||||.|||.
T Consensus        71 ~~~v~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          71 EEQVDKINQRLKEDGFLVEPPKH--AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCEE--C---CEEEEEEETTTEEEEEE
T ss_pred             ccchhhhhhhHHHcCCccccCCC--Cc--eEEEEEECCCCCEEEEE
Confidence               67789999999998765432  33  57899999999999995

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=4.4e-15  Score=126.71  Aligned_cols=129  Identities=19%  Similarity=0.249  Sum_probs=93.2

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCC---------
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---------  182 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---------  182 (384)
                      ..+++||++.|+|+++++        +||+++|||++..+...+...........+.......+.......         
T Consensus        10 i~~~dHv~i~V~Dle~a~--------~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   81 (167)
T d1sqda1          10 VKRFHHIEFWCGDATNVA--------RRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPT   81 (167)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGG
T ss_pred             CceEeEEEEEeCCHHHHH--------HHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccc
Confidence            468999999999999999        999999999998776544333222222222222222222211100         


Q ss_pred             ---CCC-----------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCC
Q 016689          183 ---VDK-----------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  248 (384)
Q Consensus       183 ---~~~-----------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  248 (384)
                         ..+           ...+.|+.|+||.|+|+++++++|+++|+++..+|.... ++.++++++.+.+..++|++++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~-~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          82 TTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLN-EAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEET-TTEEEEEEEEETTEEEEEEEECC
T ss_pred             cccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecC-CCEEEEEEEccCCcEEEEEecCC
Confidence               000           013469999999999999999999999999999987765 56778899999999999999975


Q ss_pred             C
Q 016689          249 T  249 (384)
Q Consensus       249 ~  249 (384)
                      .
T Consensus       161 ~  161 (167)
T d1sqda1         161 E  161 (167)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.59  E-value=3.1e-15  Score=117.97  Aligned_cols=107  Identities=16%  Similarity=0.121  Sum_probs=78.8

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHH
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  334 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~  334 (384)
                      +..|.|+|+++|++||+++|||++....+    .+..+....   .....+.... .    ...+.+..|++|.|+|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~---~~~~~~~~~~-~----~~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPL---EAHAQVSFAR-E----GGSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEE---EEEEEEEEES-S----SBTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEecccc---ccceeeeccc-c----cCCCCceeEEEEEecCHHH
Confidence            46799999999999999999999875432    122222221   0111222211 1    1223455789999999999


Q ss_pred             HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          335 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       335 ~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      ++++++++|+++..+|...+++ .+.+|++|||||.|||+
T Consensus        73 ~~~~l~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             HHHHHHhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            9999999999999998887875 48999999999999986

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.59  E-value=4.5e-15  Score=123.25  Aligned_cols=116  Identities=16%  Similarity=0.190  Sum_probs=81.1

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc--
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V--  329 (384)
                      +|+||.|.|+|++++++||+++|||++..+...  ...  .... ........+.+...       ...+..|++|.+  
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~~~--~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   74 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--GRV--YLKA-WTEVDKFSLVLREA-------DEPGMDFMGFKVVD   74 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--SCE--EEEC-TTCCBSCSEEEEEC-------SSCEEEEEEEEESC
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--Ccc--ceec-ccccceeecccccc-------Ccccceeeeeeehh
Confidence            589999999999999999999999998765322  111  1111 12222333333221       123445666654  


Q ss_pred             -CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCcc
Q 016689          330 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       330 -dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                       +|++++.++|+++|+++...|.....+.++.+||+|||||.|||+...+.
T Consensus        75 ~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          75 EDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             HHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence             67899999999999998877765444445899999999999999986543

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.59  E-value=5.5e-15  Score=116.49  Aligned_cols=109  Identities=16%  Similarity=0.156  Sum_probs=78.2

Q ss_pred             eeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCce
Q 016689          114 RMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  193 (384)
Q Consensus       114 ~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  193 (384)
                      |+ +..|.|+|+++|+        +||+++|||++....+    .+ ..+...+  . ...+.....  ..  ..+.+..
T Consensus         3 ri-~~~l~v~d~~~a~--------~FY~~~lG~~~~~~~~----~~-~~~~~~~--~-~~~~~~~~~--~~--~~~~~~~   61 (111)
T d2pjsa1           3 RV-VANIATPEPARAQ--------AFYGDILGMPVAMDHG----WI-VTHASPL--E-AHAQVSFAR--EG--GSGTDVP   61 (111)
T ss_dssp             EE-EEEEECSCGGGGH--------HHHTTTTCCCEEEECS----SE-EEEEEEE--E-EEEEEEEES--SS--BTTBCCC
T ss_pred             EE-EEEEEeCCHHHHH--------HHHHHhhCCceeeccc----ce-eEecccc--c-cceeeeccc--cc--CCCCcee
Confidence            45 6899999999999        9999999999875532    22 2222211  1 111111111  11  1223456


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEe
Q 016689          194 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  244 (384)
Q Consensus       194 hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~  244 (384)
                      |++|.++|+++++++++++|+++..+|...++ +.+.+|++|||||+||++
T Consensus        62 ~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          62 DLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             EEEEEecCHHHHHHHHHhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            79999999999999999999999988877765 456778999999999986

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.58  E-value=8e-15  Score=123.94  Aligned_cols=118  Identities=26%  Similarity=0.311  Sum_probs=86.8

Q ss_pred             ceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeC---CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          113 RRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       113 ~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~---~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      .+|+|++|.|+|+++++        +||+++|||++......   ........|+..++  .++.+......      ..
T Consensus         9 ~GlgHv~l~v~D~e~t~--------~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~a~~~~~------~~   72 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAM--------AFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAAFP------IP   72 (156)
T ss_dssp             GCSCEEEEECSCHHHHH--------HHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECCS------CS
T ss_pred             CCcceEEEecCCHHHHH--------HHHHHhcCceeeeEEeeccCCCCcceeEEEeecc--ccceeeeccCC------CC
Confidence            57999999999999999        99999999998765322   12233455666543  23344443321      22


Q ss_pred             CCceEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCC-EEEEeecC
Q 016689          190 TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  247 (384)
Q Consensus       190 ~g~~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~-~iel~~~~  247 (384)
                      .++.|++|+|+|   +.+++++|+++|+.+ ..|..+..+...++|++||||+ .+|+....
T Consensus        73 ~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          73 KRIHHFMLQANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CceeEEEEECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            589999999986   555789999999865 4677776677889999999998 58997643

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.8e-15  Score=125.46  Aligned_cols=124  Identities=22%  Similarity=0.271  Sum_probs=91.8

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC--cEEEEEeecCCCCcceEEEEeccCCCc--c-----ccCCCce
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVT--E-----YDKGNGY  322 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~lel~~~~~~~--~-----~~~g~g~  322 (384)
                      .++||.|.|.|+++|++||+++|||++..+...+..  ......+..+    ...+++.......  +     ...+.|+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            589999999999999999999999999876544322  2333334432    3455554322211  1     1246799


Q ss_pred             eEEEEEcCCHHHHHHHHHHCCCeEecCCccCC--CCCceEEEEECCCCCeEEEEecCcc
Q 016689          323 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNLDF  379 (384)
Q Consensus       323 ~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElve~~~f  379 (384)
                      .||||.|+|+++++++|+++|++++.+|....  ++.-++++++.|+|..++|+|+.++
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            99999999999999999999999998886543  3323568899999999999998765

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.57  E-value=8.4e-15  Score=125.75  Aligned_cols=127  Identities=17%  Similarity=0.128  Sum_probs=93.3

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEe--cCCCCC----
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY--NYGVDK----  185 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~--~~~~~~----  185 (384)
                      .++++||.|.|+|+++++        +||+++|||++..+.....+....+....+..  ...+.+..  ......    
T Consensus        11 i~~~~Hi~i~V~D~e~a~--------~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   80 (172)
T d1sp8a1          11 TLAFHHVELWCADAASAA--------GRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFLFTAPYAHGADAATAA   80 (172)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEEEEEECCSSCCGGGCS
T ss_pred             cCEEEEEEEEeCCHHHHH--------HHHHHhhCceEEEEecccccceeEEEEEeccC--CeeeEEeeccCCCchhhhcc
Confidence            468999999999999999        99999999999877654443322222222221  22333321  111100    


Q ss_pred             -------------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          186 -------------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       186 -------------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                                   ...+.|+.|+||.|+|+++++++|+++|+++..+|....+ +.++++++.|.+..++|+++.+.
T Consensus        81 ~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          81 LPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             STTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             cccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence                         1235799999999999999999999999999999887654 56888899998889999999753

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.57  E-value=4.3e-15  Score=121.74  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=83.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC-
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  330 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd-  330 (384)
                      .++||.|.|+|++++++||+++|||++..+..    .  ..+++.+..  ++.+.+...       ..+++.|++|.|. 
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~~--~~~l~l~~~-------~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----N--GDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----T--EEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC----c--ceEEeecCC--ceEEEEecC-------CCCCceEEEEEEcc
Confidence            58999999999999999999999999976542    1  233444332  444555432       2357899999995 


Q ss_pred             --CHHHHHHHHHHCCCeEecCCccCC--CCCceEEEEECCCCCeEEEEecC
Q 016689          331 --DVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 --Dvd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iElve~~  377 (384)
                        |++++.++|+++|+++...|....  .+..+.+||+|||||.||++..+
T Consensus        69 ~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          69 AAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             HHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence              577889999999999988875432  11247899999999999998643

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.56  E-value=1.3e-14  Score=123.24  Aligned_cols=123  Identities=22%  Similarity=0.280  Sum_probs=93.0

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC--CcEEEEEeecCCCCcceEEEEeccCCCcc----------ccC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD--YKYTIAVMGYGPEDKNAVLELTYNHGVTE----------YDK  318 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~lel~~~~~~~~----------~~~  318 (384)
                      .+++||.|.|.|+++|++||+++|||++......+.  .....+.+..+    ...+++........          ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhcC
Confidence            469999999999999999999999999986654332  23344445543    45566655332211          123


Q ss_pred             CCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCc--eEEEEECCCCCeEEEEecC
Q 016689          319 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINT--KITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       319 g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~--~~~~~~DPdG~~iElve~~  377 (384)
                      +.|+.||+|.|+|+++++++|+++|+++..+|.......+  +++++++|+|..++|+|+.
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            6799999999999999999999999999988875433223  6789999999999999965

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.55  E-value=3.2e-14  Score=116.42  Aligned_cols=109  Identities=23%  Similarity=0.292  Sum_probs=76.2

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE--c
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG--T  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~--V  329 (384)
                      .++||.|.|+|++++++||+++||+++..+.+.    ......  +    ...+........  .....+..|++|.  +
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~~~~--~----~~~~~~~~~~~~--~~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAYLEL--G----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEEEEE--T----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eeeeec--C----CeEEEEeeeccc--cccccccccchhcccc
Confidence            589999999999999999999999998765432    222222  2    233333322211  1122344555555  4


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +|+++++++|+++|+++..++  ..+  ++.+||+|||||.|||...
T Consensus        72 ~dl~~~~~~l~~~G~~~~~~~--~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQLRAHGVREWKQN--RSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHHTTCCEEECC--CSS--SCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHHHHCCCcCccCC--Ccc--eeEEEEECCCCCEEEEEEC
Confidence            799999999999999986543  233  5789999999999999874

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.54  E-value=2.5e-14  Score=120.83  Aligned_cols=118  Identities=14%  Similarity=0.100  Sum_probs=84.4

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecC---CCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEE
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN---PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  327 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf  327 (384)
                      ..|+||.|.|+|++++.+||+++|||++......   .+......++.+...  ++.+.....      +..++++|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~~------~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeeccC------CCCCceeEEEE
Confidence            4799999999999999999999999998765332   122233445554322  333333321      22358999999


Q ss_pred             EcCC---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCC-eEEEEecC
Q 016689          328 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNL  377 (384)
Q Consensus       328 ~VdD---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iElve~~  377 (384)
                      +|++   +.+++++|+++|+.+ ..|+++..+...++|++||||| .+|+....
T Consensus        81 ~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          81 QANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9965   555789999999864 5677766554688999999998 58997654

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.54  E-value=4.2e-14  Score=116.63  Aligned_cols=113  Identities=19%  Similarity=0.265  Sum_probs=80.7

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc--
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  329 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V--  329 (384)
                      .++||.|.|+|++++++||+++|||++......    ...  +..+.  ....+.+...... ......+..|++|.+  
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~~~--~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~~   74 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GAY--LTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFTVAE   74 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----EEE--EEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEECCH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----ccc--ccccc--ccceeeccccccc-CCCcCCccceeeeechH
Confidence            589999999999999999999999999765421    222  22221  1334444332221 122334667888887  


Q ss_pred             CCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          330 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       330 dDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +|++++.++++++|+++...+.  .+  ++.+||+|||||.|||.+..
T Consensus        75 ~d~~~~~~~l~~~Gv~~~~~~~--~~--~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          75 EDFEPLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHCCCeEeecCC--CC--ceEEEEECCCCCEEEEEECC
Confidence            6899999999999999876542  22  57899999999999997753

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.52  E-value=1.6e-14  Score=118.45  Aligned_cols=112  Identities=16%  Similarity=0.116  Sum_probs=83.5

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .+|+||.|.|+|++++++||+++|||++..+..    +.  .++..+..  ++.+.+...       ...+..|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~l~~~~~--~~~l~~~~~-------~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DA--ALYRADQR--AWRIAVQPG-------ELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TE--EEEESSSB--SCSEEEEEC-------TTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ce--eeeeeeec--ceeeeeecc-------CCCCceEEEEEec
Confidence            468999999999999999999999999876542    12  33444322  333444331       2357899999995


Q ss_pred             ---CHHHHHHHHHHCCCeEecCCccCCC--CCceEEEEECCCCCeEEEEecC
Q 016689          331 ---DVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 ---Dvd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iElve~~  377 (384)
                         |++++.++++++|+++.+.+.....  +....+||+|||||.|||+..+
T Consensus        68 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          68 DAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             cHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence               5788999999999999987754321  1146789999999999998654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=2e-14  Score=122.46  Aligned_cols=125  Identities=15%  Similarity=0.143  Sum_probs=89.9

Q ss_pred             CCceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC--cEEEEEeecCCCCcceEEEEeccCCC------------cc-
Q 016689          251 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGV------------TE-  315 (384)
Q Consensus       251 ~~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~lel~~~~~~------------~~-  315 (384)
                      .+++||.|.|.|++++++||+++|||++..+...+..  ......+..+  .....+........            .+ 
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            3699999999999999999999999998876544322  1222222222  11122211110000            00 


Q ss_pred             ----------ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          316 ----------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       316 ----------~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                                ...+.|+.||||.|+|+++++++|+++|+++..+|...+++ .++++++.+++..++|+++++
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECC
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEecCC
Confidence                      01346999999999999999999999999999999877665 478999999999999999886

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.48  E-value=6.7e-14  Score=119.98  Aligned_cols=122  Identities=17%  Similarity=0.137  Sum_probs=89.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCC--cEEEEEeecCCCCcceEEEEec--cCCCcc------------
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTY--NHGVTE------------  315 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~lel~~--~~~~~~------------  315 (384)
                      +++||.|.|.|++++++||+++|||++..+......  ......+..+    ...+.+..  ......            
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAAA   88 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC----CeeeEEeeccCCCchhhhcccccCCcch
Confidence            699999999999999999999999999876544322  2222223322    22222221  111000            


Q ss_pred             -----ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          316 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       316 -----~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                           ...+.|+.||||.|+|+++++++++++|+++..+|....++ -++++++.|.+..++|+|..+
T Consensus        89 ~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          89 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCC
Confidence                 02357999999999999999999999999999998876664 488999999888999999874

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.43  E-value=1.1e-12  Score=104.88  Aligned_cols=107  Identities=12%  Similarity=0.018  Sum_probs=75.5

Q ss_pred             EEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEE
Q 016689          118 VVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  197 (384)
Q Consensus       118 v~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~  197 (384)
                      .+|.|+|+++|+        +||+++|||++....+    .  .+++..+    ...+.+.......    .....++.+
T Consensus         9 pvL~v~Dl~~s~--------~FY~~vLG~~~~~~~~----~--~~~~~~~----~~~l~l~~~~~~~----~~~~~~~~~   66 (122)
T d1jifa_           9 PVLTAVDVPANV--------SFWVDTLGFEKDFGDR----D--FAGVRRG----DIRLHISRTEHQI----VADNTSAWI   66 (122)
T ss_dssp             EEEEESSHHHHH--------HHHHHTTCCEEEEECS----S--EEEEEET----TEEEEEEECSCHH----HHTTCEEEE
T ss_pred             EEEEcCCHHHHH--------HHHHhhhCCceEecCC----c--eeEeeee----eeeeeeecccccc----ccceeEEEE
Confidence            369999999999        9999999999875532    1  3455543    2345554432211    123457999


Q ss_pred             EECCHHHHHHHHHHcCCeeeeCCccc------cCCCEEEEEEECCCCCEEEEeec
Q 016689          198 AVEDVAKTVDLVKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       198 ~v~Dv~~~~~~l~~~G~~~~~~p~~~------~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .++|++++++++++++......+...      ..++++.+|++|||||+|||...
T Consensus        67 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          67 EVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             EESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             eechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            99999999999999997765432211      12345789999999999999764

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.42  E-value=1.1e-12  Score=105.03  Aligned_cols=106  Identities=22%  Similarity=0.284  Sum_probs=74.2

Q ss_pred             eeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHH
Q 016689          257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  336 (384)
Q Consensus       257 ~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~  336 (384)
                      .|.|.|+++|++||++ |||++.....    .+......      ...+.+.......   ......++.+.|+|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG------DLMLEFFAHPGLD---PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET------TEEEEEEECTTCC---GGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc------eeccccccccccc---cCCCCcEEEEEECCHHHHH
Confidence            4999999999999987 9999975432    23222222      2333333322111   1234458999999999999


Q ss_pred             HHHHHCCCeEec-------CCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          337 EAIKLSGGKITR-------EPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       337 ~~l~~~G~~i~~-------~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +.+++.|+++..       +|...+++ .+.+||+|||||.|||+|..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCC-cEEEEEECCCCCEEEEEEcc
Confidence            999999888654       34445655 48899999999999999863

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.40  E-value=3.8e-12  Score=101.66  Aligned_cols=106  Identities=23%  Similarity=0.314  Sum_probs=73.5

Q ss_pred             EEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceEEEEE
Q 016689          119 VYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  198 (384)
Q Consensus       119 ~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~~~  198 (384)
                      .|.|+|+++|+        +||++ |||++.....    .  .+++..+    ...+.+.......+   .....++++.
T Consensus         7 ~l~v~Dl~~s~--------~FY~~-LGf~~~~~~~----~--~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~   64 (120)
T d1ecsa_           7 NLPSRDFDSTA--------AFYER-LGFGIVFRDA----G--WMILQRG----DLMLEFFAHPGLDP---LASWFSCCLR   64 (120)
T ss_dssp             EEEESCHHHHH--------HHHHT-TTCEEEEECS----S--EEEEEET----TEEEEEEECTTCCG---GGCCCEEEEE
T ss_pred             EEEeCCHHHHH--------HHHHH-cCCeeEEecC----c--eeeeecc----eecccccccccccc---CCCCcEEEEE
Confidence            49999999999        99987 9999976432    1  3333332    12333433222221   1234579999


Q ss_pred             ECCHHHHHHHHHHcCCeeeeC-------CccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          199 VEDVAKTVDLVKAKGGKVTRE-------PGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       199 v~Dv~~~~~~l~~~G~~~~~~-------p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      ++|++++++.++++|+++...       |...++ +.+.+||+|||||+|||+|..
T Consensus        65 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          65 LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             ESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             ECCHHHHHHHHhhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            999999999999999887543       333333 345779999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=1.3e-12  Score=106.97  Aligned_cols=116  Identities=15%  Similarity=0.162  Sum_probs=77.5

Q ss_pred             eeeeecCChHHHHHHHHHhhCCeEeeeecCCCC-------cEEEEEeecCCCCcceEEEEec---cCCCccccCCCceeE
Q 016689          255 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-------KYTIAVMGYGPEDKNAVLELTY---NHGVTEYDKGNGYAQ  324 (384)
Q Consensus       255 hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~lel~~---~~~~~~~~~g~g~~h  324 (384)
                      ++.+.+.|+++|++||+++||+++..+...++.       ......+..+    ...+.+..   ..............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceE
Confidence            356777899999999999999998765432221       1112223222    12222221   111111222234469


Q ss_pred             EEEEcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEe
Q 016689          325 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  375 (384)
Q Consensus       325 iaf~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve  375 (384)
                      +++.|+|++++++++.++|++++.+|...+++ .+.++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            99999999999999999999999999888876 488999999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.33  E-value=9.5e-12  Score=99.26  Aligned_cols=105  Identities=14%  Similarity=0.084  Sum_probs=73.5

Q ss_pred             eeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHHH
Q 016689          257 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  336 (384)
Q Consensus       257 ~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~~  336 (384)
                      .|.|+|+++|++||+++|||++....+    .+.++  ..+    ...+.+......    ......++.+.++|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~--~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGV--RRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEEE--EET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeEe--eee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999875422    23333  222    344444442221    1124468999999999999


Q ss_pred             HHHHHCCCeEecCCcc-------CCCCCceEEEEECCCCCeEEEEec
Q 016689          337 EAIKLSGGKITREPGP-------LPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       337 ~~l~~~G~~i~~~p~~-------~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      ++++++++.....+..       .+++ ++.+||+|||||+|||..-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPA-GREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETT-EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCC-eEEEEEECCCCCEEEEEeC
Confidence            9999998776544321       1222 5889999999999999763

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.32  E-value=1.3e-11  Score=97.89  Aligned_cols=105  Identities=16%  Similarity=0.113  Sum_probs=72.0

Q ss_pred             eeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcCCHHHH
Q 016689          256 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  335 (384)
Q Consensus       256 V~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~VdDvd~~  335 (384)
                      ..|.|+|+++|++||+++|||++..+..    .+.....+      ...+.+......    ...+..++.+.+++++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~------~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD------DVTLFISAVQDQ----VVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET------TEEEEEEECSCT----TTGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc------cceeeccccccc----cCCCCceEEEeeccHHHH
Confidence            4589999999999999999999976532    23333222      233444332221    223556788999999988


Q ss_pred             HHHHHHCCCe--------EecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          336 AEAIKLSGGK--------ITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       336 ~~~l~~~G~~--------i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      .+.+.+.+.+        ...++...++  ++.+||+|||||.|||+..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEEC
Confidence            8877755544        3444555555  5789999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.30  E-value=5.1e-12  Score=103.22  Aligned_cols=116  Identities=12%  Similarity=0.084  Sum_probs=76.5

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCC-------ceEEEEEeeCCCCccEEEEEEecC---CCCCC
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPED-------RYTNAFLGYGPEDSHFVVELTYNY---GVDKY  186 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~-------~~~~~~l~~g~~~~~~~lel~~~~---~~~~~  186 (384)
                      ++.+.|.|+++|+        +||+++||+++..+...+++       ....+.+..+    ...+.+....   .....
T Consensus        10 ~l~v~~~~~~eAi--------~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~   77 (135)
T d1xy7a_          10 MLLVEAQKVGDAV--------TFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTA   77 (135)
T ss_dssp             EEEECTTCHHHHH--------HHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCC
T ss_pred             EEEEECCCHHHHH--------HHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccC
Confidence            4566667999999        99999999998765433221       2223444443    1122222211   11111


Q ss_pred             cCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          187 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       187 ~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      ....+..++++.++|++++++++.++|+++..+|...++| .+.++++||+|+.|+|.|
T Consensus        78 ~~~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          78 KSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CTTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             CCCCcceEEEEeecCcceeEEEeecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            1222335899999999999999999999999998887754 457889999999999975

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.30  E-value=2.5e-11  Score=96.17  Aligned_cols=107  Identities=12%  Similarity=-0.010  Sum_probs=73.5

Q ss_pred             eeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCceE
Q 016689          115 MLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  194 (384)
Q Consensus       115 i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  194 (384)
                      -.+.+|.|+|+++|+        +||+++|||++..+.+    .  .+++..+    ...+.+.......    ..+..+
T Consensus         5 ~~~pvL~v~D~~~s~--------~FY~~~LG~~~~~~~~----~--~~~~~~~----~~~l~~~~~~~~~----~~~~~~   62 (120)
T d1xrka_           5 SAVPVLTARDVAEAV--------EFWTDRLGFSRVFVED----D--FAGVVRD----DVTLFISAVQDQV----VPDNTQ   62 (120)
T ss_dssp             EEEEEEEESCHHHHH--------HHHHHTTCCEEEEECS----S--EEEEEET----TEEEEEEECSCTT----TGGGCE
T ss_pred             eEEEEEEECCHHHHH--------HHHHHhhCCeEEEECC----C--eeEEecc----cceeecccccccc----CCCCce
Confidence            446679999999999        9999999999976532    1  3444443    2233443332221    224557


Q ss_pred             EEEEECCHHHHHHHHHHcCCeee--------eCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          195 FGIAVEDVAKTVDLVKAKGGKVT--------REPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       195 i~~~v~Dv~~~~~~l~~~G~~~~--------~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      +.+.+++++...+.+++++.+..        .++...+  .++.+||+|||||+|||+.
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          63 AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQP--WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             EEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEET--TEEEEEEECTTCCEEEEEE
T ss_pred             EEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecC--CEEEEEEECCCCCEEEEEE
Confidence            88999999999888877665443        3344333  3468899999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.16  E-value=8.6e-11  Score=98.02  Aligned_cols=119  Identities=10%  Similarity=0.052  Sum_probs=86.3

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCC----CCc
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD----KYD  187 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~----~~~  187 (384)
                      ..+++||.+.|+|++++.        +||++ |||+.+.+....    ....+..|    ...+.+.......    ...
T Consensus         7 ~~Gidhv~fav~d~~~~~--------~~~~~-lGF~~~~~~~~~----~~~l~~~G----~i~ll~~~~~~s~~~~~~~~   69 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLE--------PIFEI-MGFTKVATHRSK----NVHLYRQG----EINLILNNEPNSIASYFAAE   69 (150)
T ss_dssp             EEEEEEEEEECSSTTSSH--------HHHHH-TTCEEEEEESSS----SEEEEEET----TEEEEEECCSSSHHHHHHHH
T ss_pred             cCCEEEEEEecCCHHHHH--------HHHHH-hCCEEEecccce----EEEEEecC----cEEEEecCCCCCHhHhHHhh
Confidence            458999999999999999        99976 999988764321    12233433    2222222221111    024


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCC
Q 016689          188 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  249 (384)
Q Consensus       188 ~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  249 (384)
                      .+.|+.|+||.|+|+++++++++++|+++..+|..  .+...+..+++|+|.++.|+++...
T Consensus        70 hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          70 HGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             HSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             CCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCC
Confidence            67899999999999999999999999998876532  2455567799999999999998764

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.13  E-value=1.2e-10  Score=97.16  Aligned_cols=116  Identities=11%  Similarity=0.071  Sum_probs=84.6

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCCCcEEEEEeecCCCCcceEEEEeccCCCc--c--ccCCCceeEEEE
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--E--YDKGNGYAQIAI  327 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~--~--~~~g~g~~hiaf  327 (384)
                      .++||.+.|+|++++.+||++ |||+...+...  ....+  ++.+    ...+.+..+....  .  ...++|+.||+|
T Consensus         9 Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~--~~~~l--~~~G----~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf   79 (150)
T d1cjxa1           9 GFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS--KNVHL--YRQG----EINLILNNEPNSIASYFAAEHGPSVCGMAF   79 (150)
T ss_dssp             EEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS--SSEEE--EEET----TEEEEEECCSSSHHHHHHHHHSSEEEEEEE
T ss_pred             CEEEEEEecCCHHHHHHHHHH-hCCEEEecccc--eEEEE--EecC----cEEEEecCCCCCHhHhHHhhCCCceEEEEE
Confidence            689999999999999999976 99998865432  22222  3322    2333343322211  1  135789999999


Q ss_pred             EcCCHHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecCc
Q 016689          328 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  378 (384)
Q Consensus       328 ~VdDvd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~~  378 (384)
                      .|+|+++++++++++|++++.+|.. ++. ..+..+++|+|.++.|+++.+
T Consensus        80 ~V~D~~~a~~~a~~~Ga~~i~~~~~-~g~-~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          80 RVKDSQKAYNRALELGAQPIHIDTG-PME-LNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EESCHHHHHHHHHHTTCCBCCCCCC-TTC-BCCCEEECGGGCEEEEECCCS
T ss_pred             EeCCHHHHHHHHHHCCCEEcccCCC-CCc-eeeeEEEcCCCCEEEEECcCC
Confidence            9999999999999999998876543 332 356789999999999999764

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.04  E-value=4.8e-10  Score=98.03  Aligned_cols=100  Identities=19%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             ceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCceEEEEEeeCCCCccEEEEEEecCCCCC-----
Q 016689          113 RRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-----  185 (384)
Q Consensus       113 ~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-----  185 (384)
                      .+|+||++.|+  |+++++        .||+++|||+.....+.++....+.............+.+........     
T Consensus         4 ~~IDHIa~~V~~~~l~~a~--------~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~   75 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWA--------NFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEE   75 (203)
T ss_dssp             EEEEEECEECCTTHHHHHH--------HHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHH
T ss_pred             CeeCeeEeccChhhHHHHH--------HHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHH
Confidence            58999999998  999999        999999999998876655543332222221222233333332222111     


Q ss_pred             ---CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC
Q 016689          186 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  220 (384)
Q Consensus       186 ---~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p  220 (384)
                         ...|.|+.|+||.|+|+.+++++|+++|+++...|
T Consensus        76 fl~~~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          76 FLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             HHHHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHhcCCCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence               23567999999999999999999999999998654

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.00  E-value=6.2e-10  Score=97.27  Aligned_cols=97  Identities=24%  Similarity=0.220  Sum_probs=68.8

Q ss_pred             CceeeeeecC--ChHHHHHHHHHhhCCeEeeeecCCCCcEEE--EEeecCCCCcceEEEEeccCCC-cc-------ccCC
Q 016689          252 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYKYTI--AVMGYGPEDKNAVLELTYNHGV-TE-------YDKG  319 (384)
Q Consensus       252 ~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~lel~~~~~~-~~-------~~~g  319 (384)
                      +++||++.|+  |+++++.||+++|||+.....+.++....+  ..+...  .....+.+..+... ..       ...+
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~--~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP--DGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT--TSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeecc--ccccceecccCCCCCccHHHHHHHhcCC
Confidence            5899999997  999999999999999998776544332222  222222  22333333322211 11       1356


Q ss_pred             CceeEEEEEcCCHHHHHHHHHHCCCeEecCC
Q 016689          320 NGYAQIAIGTDDVYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       320 ~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p  350 (384)
                      .|++||||.|+||.++++.|+++|+++...|
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            8999999999999999999999999998765

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.96  E-value=9.5e-09  Score=83.66  Aligned_cols=111  Identities=19%  Similarity=0.102  Sum_probs=72.1

Q ss_pred             CChHHHHHHHHHhhCCeEeeeecCCCC------------cEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          261 GDLDRAINFYKKAFGMELLRKRDNPDY------------KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       261 ~Dle~s~~FY~~vLG~~~~~~~~~~~~------------~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      .|.++|++||+++||+++.......+.            ......+..+    ...+......... ........++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~-~~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAY-PYEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTS-CCCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCcc-cccCCCcEEEEEE
Confidence            499999999999999998765433221            1111122211    1122222111111 1122344678888


Q ss_pred             cCCHH--HHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          329 TDDVY--KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       329 VdDvd--~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      +++.+  +.+.++.++|++++.+|.+.+++. +.++|+||+|+.|+|....
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~-~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAA-SFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEE-EEEEEECTTSCEEEEEESC
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCc-EEEEEECCCCCEEEEEecC
Confidence            87654  456777789999999999999863 7899999999999998754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.92  E-value=6.4e-09  Score=90.19  Aligned_cols=97  Identities=16%  Similarity=0.287  Sum_probs=68.6

Q ss_pred             CceeeeeecC--ChHHHHHHHHHhhCCeEeeeecC-----CCCcEEEEEeecCCCCcceEEEEeccC--CCcc-------
Q 016689          252 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDN-----PDYKYTIAVMGYGPEDKNAVLELTYNH--GVTE-------  315 (384)
Q Consensus       252 ~~~hV~L~V~--Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~lel~~~~--~~~~-------  315 (384)
                      .++||++.|+  ++++++.||+++|||+.......     +........+..+  +....+.+..+.  ....       
T Consensus         6 ~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~~~~s~i~~FL~   83 (199)
T d1t47a2           6 AIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKKKSQIDEYLE   83 (199)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             eeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCccccccchhhhhh
Confidence            5899999998  99999999999999998754322     2222332323322  223444443221  1111       


Q ss_pred             ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC
Q 016689          316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       316 ~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p  350 (384)
                      ...++|++||||.|+||.++++.|+++|++++..|
T Consensus        84 ~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          84 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            13467999999999999999999999999999887

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.82  E-value=2.9e-08  Score=85.93  Aligned_cols=100  Identities=16%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             ccceeeEEEEEeC--CHHHHHhhcCCChhHHhhhccCCEEEeeeeC-----CCCceEEEEEeeCCCCccEEEEEEecCCC
Q 016689          111 DKRRMLHVVYRVG--DLDKTINSLGCGYCRFYTECLGMKLLRKRDI-----PEDRYTNAFLGYGPEDSHFVVELTYNYGV  183 (384)
Q Consensus       111 ~~~~i~Hv~l~V~--Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~lel~~~~~~  183 (384)
                      +..+|+||++.|+  ++++++        .||+++|||+.......     +.......-+...  +....+.+......
T Consensus         3 ~f~~IDHia~avp~~~l~~av--------~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~   72 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWV--------GFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALA   72 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHH--------HHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCS
T ss_pred             cceeeCceEeccChhhHHHHH--------HHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCcc
Confidence            3468999999998  999999        99999999998754321     1122222222221  22333333321111


Q ss_pred             C--C-------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCC
Q 016689          184 D--K-------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  220 (384)
Q Consensus       184 ~--~-------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p  220 (384)
                      .  .       ...|.|+.||||.|+|+.+++++|+++|+++...|
T Consensus        73 ~~~s~i~~FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          73 KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             ccccchhhhhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            1  1       23567999999999999999999999999998777

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.79  E-value=2.1e-08  Score=88.60  Aligned_cols=95  Identities=17%  Similarity=0.266  Sum_probs=63.9

Q ss_pred             ccceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----CceEEEEEeeCCCCccEEEEEEecCC---
Q 016689          111 DKRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYG---  182 (384)
Q Consensus       111 ~~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~---  182 (384)
                      ...+|+||++.|+|+++++        +||+++|||+..+.....+     .......+...  +....+++.....   
T Consensus         6 Gl~~IDHI~i~V~dld~a~--------~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~--~g~v~~~l~E~~~~~~   75 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAA--------AYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLNEPVHGTK   75 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEEEECCCSS
T ss_pred             CcCeeeeeEEeccCHHHHH--------HHHHHHhCCEEEEEeccccccccceeEEEEEEEcC--CCccceeeeeecCCCC
Confidence            3468999999999999999        9999999999876543221     12222333322  2233344433211   


Q ss_pred             CCC-------CcCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 016689          183 VDK-------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGK  215 (384)
Q Consensus       183 ~~~-------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~  215 (384)
                      ...       ...+.|+.||||.|+|+.++++.|+++|+.
T Consensus        76 ~~s~i~~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          76 RRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             SCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             CccHHHHHHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence            111       124579999999999999999999998754

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-08  Score=89.45  Aligned_cols=97  Identities=18%  Similarity=0.252  Sum_probs=67.1

Q ss_pred             CceeeeeecCC--hHHHHHHHHHhhCCeEeeeecCC-----CCcEEEEEeecCCCCcceEEEEeccCCC--c----c---
Q 016689          252 PLCQVMLRVGD--LDRAINFYKKAFGMELLRKRDNP-----DYKYTIAVMGYGPEDKNAVLELTYNHGV--T----E---  315 (384)
Q Consensus       252 ~~~hV~L~V~D--le~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~lel~~~~~~--~----~---  315 (384)
                      .++||++.|++  +++++.||+++|||+.....+..     ........+....  ....+.+..+...  .    .   
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccHHHHHHh
Confidence            59999999987  99999999999999876543321     1112222233222  2344544442211  1    1   


Q ss_pred             ccCCCceeEEEEEcCCHHHHHHHHHHCCCeEecCC
Q 016689          316 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  350 (384)
Q Consensus       316 ~~~g~g~~hiaf~VdDvd~~~~~l~~~G~~i~~~p  350 (384)
                      ...|.|++||||.|+||.+++++|+++|+++...|
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            14578999999999999999999999999999887

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.78  E-value=1.3e-07  Score=76.56  Aligned_cols=111  Identities=19%  Similarity=0.172  Sum_probs=71.4

Q ss_pred             CCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCCCc------------eEEEEEeeCCCCccEEEEEEecCCCCCCcCCC
Q 016689          123 GDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPEDR------------YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  190 (384)
Q Consensus       123 ~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~~~------------~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~  190 (384)
                      .|.++|+        +||+++||+++.......+..            ...+-+..+    ...+............. .
T Consensus        12 g~a~eAl--------~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~~~~-~   78 (137)
T d1u6la_          12 GNCREAF--------SCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEG-I   78 (137)
T ss_dssp             SCHHHHH--------HHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCC-C
T ss_pred             CCHHHHH--------HHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCcccccC-C
Confidence            4999999        999999999987655433321            111222222    11222221111112222 3


Q ss_pred             CceEEEEEECCHH--HHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecC
Q 016689          191 GFGHFGIAVEDVA--KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  247 (384)
Q Consensus       191 g~~hi~~~v~Dv~--~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  247 (384)
                      +-.++++.+++.+  +.+.++.++|+++..+|.+.++ +.+..+|+||+|+.|+|....
T Consensus        79 ~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          79 KGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             CcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCC-CcEEEEEECCCCCEEEEEecC
Confidence            4456888888655  4577778899999999988875 456789999999999997543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.6e-08  Score=88.33  Aligned_cols=101  Identities=15%  Similarity=0.260  Sum_probs=68.1

Q ss_pred             ccceeeEEEEEeCC--HHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----CceEEEEEeeCCCCccEEEEEEecCCC
Q 016689          111 DKRRMLHVVYRVGD--LDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV  183 (384)
Q Consensus       111 ~~~~i~Hv~l~V~D--l~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~~  183 (384)
                      ...+|+||++.|++  +++++        +||+++|||+..+..+..+     .......+...  .....+.+......
T Consensus        21 gl~~IDHv~~~Vp~~~ld~av--------~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~--~~~i~~~lne~~~~   90 (210)
T d1sqia2          21 NLEIIDHIVGNQPDQEMESAS--------EWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPG   90 (210)
T ss_dssp             CEEEEEEEEEECCTTCHHHHH--------HHHHHHHCCEEECCC-----------CEEEEEECT--TSCCEEEEEECC--
T ss_pred             CcceeCceEeccCchhHHHHH--------HHHHHHhCCEEEEEecccccCCceeEEEEEEEEec--CccccccccccCCC
Confidence            34689999999997  99999        9999999999866533111     11112222322  22333434332111


Q ss_pred             ---CC------CcCCCCceEEEEEECCHHHHHHHHHHcCCeeeeCCc
Q 016689          184 ---DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  221 (384)
Q Consensus       184 ---~~------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~~~~~p~  221 (384)
                         ..      ...|.|+.|+||.|+|+.+++++|+++|+++...|.
T Consensus        91 ~~~sqi~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          91 RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             ---CHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             CcccHHHHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence               11      235789999999999999999999999999997774

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.75  E-value=2.1e-08  Score=88.51  Aligned_cols=97  Identities=16%  Similarity=0.247  Sum_probs=64.4

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCC-----CCcEEEEEeecCCCCcceEEEEecc---CCCcc-------c
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-----DYKYTIAVMGYGPEDKNAVLELTYN---HGVTE-------Y  316 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~lel~~~---~~~~~-------~  316 (384)
                      +++||++.|+|+++++.||+++|||+...+....     ........+..+.  ....+.+...   .....       .
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~--g~v~~~l~E~~~~~~~~s~i~~FL~~   86 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTFLDH   86 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHHHHH
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC--CccceeeeeecCCCCCccHHHHHHHh
Confidence            6899999999999999999999999987654322     2223333333222  2333444332   11111       1


Q ss_pred             cCCCceeEEEEEcCCHHHHHHHHHHCC----CeEecCC
Q 016689          317 DKGNGYAQIAIGTDDVYKTAEAIKLSG----GKITREP  350 (384)
Q Consensus       317 ~~g~g~~hiaf~VdDvd~~~~~l~~~G----~~i~~~p  350 (384)
                      ..+.|++||||.|+||+++++.|+++|    +++...|
T Consensus        87 ~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          87 HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             ccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            246799999999999999999999875    4455444

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.55  E-value=1.6e-06  Score=69.94  Aligned_cols=112  Identities=15%  Similarity=0.114  Sum_probs=68.3

Q ss_pred             eeecCChHHHHHHHHHhhCCeEeeeec-------CCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEc
Q 016689          257 MLRVGDLDRAINFYKKAFGMELLRKRD-------NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  329 (384)
Q Consensus       257 ~L~V~Dle~s~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~V  329 (384)
                      .+.-+|.++|++||+++||.+...+..       .+++...-..+..+    +..+-+...........+ ....+++.+
T Consensus        11 ~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~-~~~s~~l~~   85 (134)
T d1u7ia_          11 MFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFT-PAFSFFVDC   85 (134)
T ss_dssp             EEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCC-TTEEEEEEC
T ss_pred             EECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCC-CceEEEEEe
Confidence            344458999999999999987643321       12223333334332    222222221111112222 334677777


Q ss_pred             CCHHHH--HHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEE
Q 016689          330 DDVYKT--AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  374 (384)
Q Consensus       330 dDvd~~--~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElv  374 (384)
                      ++.+..  +.+..+.|++++.++.+.+++. +...++||.|+.|.|.
T Consensus        86 ~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~-~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          86 ESNAQIERLAEALSDGGKALMPLGDYGFSQ-RFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CCHHHHHHHHHHHHTTSEEEEEEECCSSSS-EEEEEECTTSCEEEEE
T ss_pred             ccHHHHHHHHHHHhcCCEEecCcccccccc-eEEEEECCCCCEEEEE
Confidence            664433  4455577889999998888864 8899999999999985

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.45  E-value=3.1e-07  Score=81.13  Aligned_cols=94  Identities=17%  Similarity=0.287  Sum_probs=62.6

Q ss_pred             cceeeEEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeeeCCC-----CceEEEEEeeCCCCccEEEEEEecCCC---
Q 016689          112 KRRMLHVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV---  183 (384)
Q Consensus       112 ~~~i~Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~~---  183 (384)
                      ..+|+||++.|+|++++.        +||+++||+.........+     ......-+.. + .....+.+.....+   
T Consensus        20 l~~IDHI~iaVpdld~a~--------~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s-~-~g~v~~~l~E~~~~~~~   89 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPAL--------TYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS-N-DEMVLLPINEPVHGTKR   89 (230)
T ss_dssp             EEEEEEEEEECSCHHHHH--------HHHHHHHCCEEEEEEC--------CCEEEEEEEC-T-TSCSEEEEEEECCC---
T ss_pred             cCccCcceecccCHHHHH--------HHHHHHcCCeeeEEecccccccceeeEeeccccC-C-CcccceeEEeecCCCCC
Confidence            468999999999999999        9999999998876643222     1111111221 1 22334444332111   


Q ss_pred             -CC------CcCCCCceEEEEEECCHHHHHHHHHHcCCe
Q 016689          184 -DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGK  215 (384)
Q Consensus       184 -~~------~~~g~g~~hi~~~v~Dv~~~~~~l~~~G~~  215 (384)
                       .+      ...|.|+.|+||.|+|+.+++++|+++|..
T Consensus        90 ~sqi~~FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          90 KSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             cchHHHHHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence             11      235789999999999999999999998644

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.44  E-value=2.3e-07  Score=81.93  Aligned_cols=97  Identities=18%  Similarity=0.273  Sum_probs=64.3

Q ss_pred             CceeeeeecCChHHHHHHHHHhhCCeEeeeecCCC-----CcEEEEEeecCCCCcceEEEEeccCCC---cc-------c
Q 016689          252 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----YKYTIAVMGYGPEDKNAVLELTYNHGV---TE-------Y  316 (384)
Q Consensus       252 ~~~hV~L~V~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~lel~~~~~~---~~-------~  316 (384)
                      +++||.+.|+|++++.+||+++||++........+     .......+..+  +....+.+.+....   ..       .
T Consensus        22 ~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~--~g~v~~~l~E~~~~~~~~sqi~~FL~~   99 (230)
T d1sqda2          22 RLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN--DEMVLLPINEPVHGTKRKSQIQTYLEH   99 (230)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT--TSCSEEEEEEECCC---CCHHHHHHHH
T ss_pred             ccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCC--CcccceeEEeecCCCCCcchHHHHHhh
Confidence            59999999999999999999999998876654221     11222222222  22344444432111   11       1


Q ss_pred             cCCCceeEEEEEcCCHHHHHHHHHHC----CCeEe-cCC
Q 016689          317 DKGNGYAQIAIGTDDVYKTAEAIKLS----GGKIT-REP  350 (384)
Q Consensus       317 ~~g~g~~hiaf~VdDvd~~~~~l~~~----G~~i~-~~p  350 (384)
                      ..+.|++||||.|+||.++++.|++.    |+++. ..|
T Consensus       100 ~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p  138 (230)
T d1sqda2         100 NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPP  138 (230)
T ss_dssp             HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCC
T ss_pred             ccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCc
Confidence            35789999999999999999999986    55554 444

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.42  E-value=6e-06  Score=66.43  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=70.9

Q ss_pred             EEEEEeCCHHHHHhhcCCChhHHhhhccCCEEEeeee-------CCCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          117 HVVYRVGDLDKTINSLGCGYCRFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       117 Hv~l~V~Dl~~a~~~~~~~~~~FY~~~LG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      ++.+.-+|.++|+        +||+++||.+.+.+..       .+.+....+-|..+    +..+-+...........+
T Consensus         9 yL~f~g~~a~eAi--------~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~   76 (134)
T d1u7ia_           9 FLMFQGVQAEAAM--------NFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFT   76 (134)
T ss_dssp             EEEEESSCHHHHH--------HHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCC
T ss_pred             EEEECCcCHHHHH--------HHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCC
Confidence            3444446899999        9999999987654321       12233444555543    223333322222222333


Q ss_pred             CCceEEEEEECCHHHH--HHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEee
Q 016689          190 TGFGHFGIAVEDVAKT--VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  245 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~~--~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~  245 (384)
                      .+ ..+++.+++.+..  +.+..++|+++..++.+..+| .+...++||.|+.|.|.-
T Consensus        77 ~~-~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          77 PA-FSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             TT-EEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEE
T ss_pred             Cc-eEEEEEeccHHHHHHHHHHHhcCCEEecCccccccc-ceEEEEECCCCCEEEEEc
Confidence            33 4588888875543  455557788999888776654 457789999999998853

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.97  E-value=7e-05  Score=59.53  Aligned_cols=109  Identities=11%  Similarity=0.087  Sum_probs=64.5

Q ss_pred             eeec-CChHHHHHHHHHhhCCeEeee-ec------CCCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEE
Q 016689          257 MLRV-GDLDRAINFYKKAFGMELLRK-RD------NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  328 (384)
Q Consensus       257 ~L~V-~Dle~s~~FY~~vLG~~~~~~-~~------~~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~  328 (384)
                      -|.. .|.++|++||+++||-....+ ..      .+++......+..+    +..+-+......    .+. -..+.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~----~~~-~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSG----TEL-PISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCC----CCC-CEEEEec
Confidence            3445 499999999999997543322 11      11233333334332    223322221110    111 1246677


Q ss_pred             cCCHHH---HHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEec
Q 016689          329 TDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  376 (384)
Q Consensus       329 VdDvd~---~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~  376 (384)
                      +++.++   ++++|. .|+++..++.+.+++ .+...++||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHhc-cCCEEeccccccccc-ceEEEEECCCCCEEEEeCC
Confidence            776554   455665 566999888888886 3788999999999999765

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.84  E-value=0.00028  Score=55.87  Aligned_cols=110  Identities=10%  Similarity=0.109  Sum_probs=65.5

Q ss_pred             EEEEeC-CHHHHHhhcCCChhHHhhhccCCE-EEeeeeC------CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCC
Q 016689          118 VVYRVG-DLDKTINSLGCGYCRFYTECLGMK-LLRKRDI------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  189 (384)
Q Consensus       118 v~l~V~-Dl~~a~~~~~~~~~~FY~~~LG~~-~~~~~~~------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  189 (384)
                      .-|.+. |.++|+        +||+++||-. +......      +++....+-+..+    +..+-+.......    +
T Consensus         8 Pyl~f~g~a~eAi--------~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~~----~   71 (129)
T d1tsja_           8 TFLMFNNQAEEAV--------KLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSGT----E   71 (129)
T ss_dssp             EEEECSSCHHHHH--------HHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC----------
T ss_pred             EEEEECCCHHHHH--------HHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCCC----C
Confidence            455664 999999        9999999654 3332211      2234444555544    2223222211111    1


Q ss_pred             CCceEEEEEECCHHH---HHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeec
Q 016689          190 TGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  246 (384)
Q Consensus       190 ~g~~hi~~~v~Dv~~---~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  246 (384)
                      .. ..+.+.+++.++   ++++| ++|+++..++.+.+. +.+...++||.|+.|.|..+
T Consensus        72 ~~-~s~~v~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          72 LP-ISLFVTVKDTIEMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             -C-CCEEEECSSHHHHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             CC-EEEEeccCCHHHHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            11 137788888665   44555 456688888777664 55678899999999998653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.06  E-value=0.14  Score=41.04  Aligned_cols=127  Identities=15%  Similarity=0.158  Sum_probs=75.5

Q ss_pred             EeCCHHHHHhhcCCChhHHhhhccCC-EEEeeeeC-------CCCceEEEEEeeCCCCccEEEEEEecCCCCCCcCCCCc
Q 016689          121 RVGDLDKTINSLGCGYCRFYTECLGM-KLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  192 (384)
Q Consensus       121 ~V~Dl~~a~~~~~~~~~~FY~~~LG~-~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~  192 (384)
                      .-.|.++|+        +||+++||- ++......       +.+..-.+.+..+  +  ..+-.. + ..+....++++
T Consensus         9 F~Gna~EAl--------~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~--g--~~lm~s-D-~~~~~~~~~~~   74 (156)
T d1u69a_           9 YDSAALEAA--------TFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM--G--IPCLGL-N-GGPAFRHSEAF   74 (156)
T ss_dssp             ESSCHHHHH--------HHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET--T--EEEEEE-E-CCTTCCCCTTE
T ss_pred             ECCcHHHHH--------HHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC--C--eEEEee-c-CCCCCCCCCCe
Confidence            347899999        999999964 33332211       1223444445443  1  122122 1 12223344454


Q ss_pred             eEEEEEECC---HHHHHHHHHHcCCeeeeCCccccCCCEEEEEEECCCCCEEEEeecCCCCCCceeeeeecCChHHHHHH
Q 016689          193 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINF  269 (384)
Q Consensus       193 ~hi~~~v~D---v~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~~~~hV~L~V~Dle~s~~F  269 (384)
                       ++.+.++|   +++++++|.+.| .+..+     -|     +++|+-|..|.|+.+.-.      -.+...|.+++.+=
T Consensus        75 -sl~l~~d~~eE~d~~f~~LsegG-~~~~~-----~G-----~v~DkFGV~Wqi~~~~~~------~~~~~~~~~~~~~~  136 (156)
T d1u69a_          75 -SFQVATDDQAETDRLWNAIVDNG-GEESA-----CG-----WCRDKWGISWQITPRVLS------EAIASPDRAAARRA  136 (156)
T ss_dssp             -EEEEEESSHHHHHHHHHHHHHTT-CEECS-----TT-----EEECTTSCEEEEEEHHHH------HHHTCSSHHHHHHH
T ss_pred             -EEEEecCCHHHHHHHHHHHhccC-CCCCC-----Ce-----EEECCCCCEEEeChHHHH------HHhcCCCHHHHHHH
Confidence             58899987   555778887766 33322     12     599999999999976310      12233677888888


Q ss_pred             HHHhhCCeEe
Q 016689          270 YKKAFGMELL  279 (384)
Q Consensus       270 Y~~vLG~~~~  279 (384)
                      ++..+.|+-.
T Consensus       137 ~~a~~~m~k~  146 (156)
T d1u69a_         137 FEAMMTMGRI  146 (156)
T ss_dssp             HHHHTTCSSC
T ss_pred             HHHHHcCcCe
Confidence            8888877643

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.75  E-value=0.14  Score=40.98  Aligned_cols=101  Identities=14%  Similarity=0.025  Sum_probs=58.6

Q ss_pred             ecCChHHHHHHHHHhhCC-eEeeeecC-------CCCcEEEEEeecCCCCcceEEEEeccCCCccccCCCceeEEEEEcC
Q 016689          259 RVGDLDRAINFYKKAFGM-ELLRKRDN-------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  330 (384)
Q Consensus       259 ~V~Dle~s~~FY~~vLG~-~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~lel~~~~~~~~~~~g~g~~hiaf~Vd  330 (384)
                      .-.|.++|.+||+++||- ++......       +.+.+....+..+    +..+-... . .+.+..+++ .++.+.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD-~-~~~~~~~~~-~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLN-G-GPAFRHSEA-FSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEE-C-CTTCCCCTT-EEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeec-C-CCCCCCCCC-eEEEEecC
Confidence            458999999999999964 33332111       1222333333332    12222221 1 122333444 47888887


Q ss_pred             C---HHHHHHHHHHCCCeEecCCccCCCCCceEEEEECCCCCeEEEEecC
Q 016689          331 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  377 (384)
Q Consensus       331 D---vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iElve~~  377 (384)
                      |   +++++++|.+.| ++.     .+.|     .++|+-|..|.|+.+.
T Consensus        82 ~~eE~d~~f~~LsegG-~~~-----~~~G-----~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          82 DQAETDRLWNAIVDNG-GEE-----SACG-----WCRDKWGISWQITPRV  120 (156)
T ss_dssp             SHHHHHHHHHHHHHTT-CEE-----CSTT-----EEECTTSCEEEEEEHH
T ss_pred             CHHHHHHHHHHHhccC-CCC-----CCCe-----EEECCCCCEEEeChHH
Confidence            6   566788888766 332     2332     5999999999999753