Citrus Sinensis ID: 016726


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
ccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccHHHHHHHHHcccEEEEEccccccccEEEEEEEEcc
cccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccEEEEEEEEccccccccEEEEEcccEEEEccccccccccEEEEEEEEcc
MDIKLQlegaesnlemgslddrsmhefedeslftpeaeseKIQRVhglqngsvsgdfpssgnkilqnsvcRSIKTVVFSNklnllmpfgpLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTgatvggllnatfgnATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAffcgglicckkeqVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRgqtelyvplsedenqtgndadhggnhddneapeisKWESLIWLAIMTAWISILSQYVVDAIEVTFGFstslccsdvyhKISMVYDfmdncpplfiicdgkwvlrlgntrtppppfflcyavnvf
mdiklqlegaesnlemgslddrsMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTgndadhggnhddnEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
***************************************************************ILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVP**************************SKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNV*
****************************************************************LQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
************************************************************GNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVP***********************PEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVYDFMDNCPPLFIICDGKWVLRLGNTRTPPPPFFLCYAVNVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query384 2.2.26 [Sep-21-2011]
Q8L783441 Vacuolar cation/proton ex yes no 0.783 0.682 0.660 1e-114
Q39254441 Vacuolar cation/proton ex no no 0.783 0.682 0.644 1e-111
Q9LFZ8448 Putative vacuolar cation/ no no 0.770 0.660 0.617 1e-102
Q6K1C4417 Vacuolar cation/proton ex yes no 0.700 0.645 0.623 8e-91
Q5KQN0437 Vacuolar cation/proton ex no no 0.726 0.638 0.602 6e-90
Q6YXZ1447 Putative vacuolar cation/ no no 0.773 0.664 0.536 1e-77
Q945S5446 Vacuolar cation/proton ex no no 0.661 0.569 0.416 2e-47
Q39253463 Vacuolar cation/proton ex no no 0.744 0.617 0.388 1e-45
Q93Z81459 Vacuolar cation/proton ex no no 0.736 0.616 0.43 2e-45
Q769E5451 Vacuolar cation/proton ex no no 0.651 0.554 0.444 2e-41
>sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 Back     alignment and function desciption
 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/312 (66%), Positives = 249/312 (79%), Gaps = 11/312 (3%)

Query: 11  ESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVC 70
           ++ +EMG ++D      E +SLF  + +S + +    ++ GS+S  F     K   NSV 
Sbjct: 11  QAQVEMGLVND-----VEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVL 65

Query: 71  RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
           +S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERLGYATEQL  +
Sbjct: 66  QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
           TG+TVGGLLNATFGN TELIISI+ALKSGMIRVVQL+LLGSILSNMLLVLGCAFFCGGL+
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
             +KEQVF+K +AVVNSGLLLMAVMGL+FPAVLHYTH+EVH G SELALSRFSSCIMLVA
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWI 310
           Y AYLFFQL+ Q   Y PL+E+ NQ    +      DD+E PEISKWE++IWL+I+TAW+
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTEETNQNEETS------DDDEDPEISKWEAIIWLSILTAWV 299

Query: 311 SILSQYVVDAIE 322
           S+LS Y+VDAIE
Sbjct: 300 SLLSGYLVDAIE 311




Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
Arabidopsis thaliana (taxid: 3702)
>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 Back     alignment and function description
>sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=2 SV=3 Back     alignment and function description
>sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 Back     alignment and function description
>sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 Back     alignment and function description
>sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 Back     alignment and function description
>sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 Back     alignment and function description
>sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 Back     alignment and function description
>sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 Back     alignment and function description
>sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query384
255586136362 Vacuolar cation/proton exchanger, putati 0.833 0.883 0.778 1e-139
359494235446 PREDICTED: vacuolar cation/proton exchan 0.791 0.681 0.706 1e-120
359485864450 PREDICTED: vacuolar cation/proton exchan 0.809 0.691 0.686 1e-118
380039662449 CAX2 transporter [Sedum alfredii] 0.802 0.685 0.693 1e-116
380039664449 CAX2 transporter [Sedum alfredii] 0.802 0.685 0.683 1e-116
356524415428 PREDICTED: vacuolar cation/proton exchan 0.773 0.693 0.691 1e-113
224056879398 Ca2+ antiporter/cation exchanger [Populu 0.705 0.680 0.742 1e-112
297853280441 predicted protein [Arabidopsis lyrata su 0.783 0.682 0.660 1e-112
30696001441 vacuolar cation/proton exchanger 5 [Arab 0.783 0.682 0.660 1e-112
449444449467 PREDICTED: vacuolar cation/proton exchan 0.799 0.657 0.654 1e-109
>gi|255586136|ref|XP_002533730.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] gi|223526368|gb|EEF28661.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/325 (77%), Positives = 281/325 (86%), Gaps = 5/325 (1%)

Query: 1   MDIKLQLEGAESNLEMGSL-DDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPS 59
           MD KL   G +S LEMGS+ ++ S+HEFEDESLF+PE  ++K+Q  H  + GSVSG FP 
Sbjct: 1   MDYKLHAVGIQSQLEMGSITENGSVHEFEDESLFSPELGTQKMQPNHIAEYGSVSGGFPP 60

Query: 60  SGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAER 119
            G+K  +N V RSIKTVVFSNKLNLLMPFGPLAI+VH  +GH GWVFFLSLLGITPLAER
Sbjct: 61  GGSKRWRNGVYRSIKTVVFSNKLNLLMPFGPLAILVHISSGHNGWVFFLSLLGITPLAER 120

Query: 120 LGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLV 179
           LGYATEQL F+TGATVGGLLNATFGNATELII+IYAL+S MIRVVQLSLLGSILSNMLLV
Sbjct: 121 LGYATEQLAFYTGATVGGLLNATFGNATELIIAIYALRSRMIRVVQLSLLGSILSNMLLV 180

Query: 180 LGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELAL 239
           LGCAFFCGGL+  +KEQVFNKA+AVVNSGLLLMAVMGL+FPAVLHYTHTEVH+GKSELAL
Sbjct: 181 LGCAFFCGGLVFYRKEQVFNKATAVVNSGLLLMAVMGLLFPAVLHYTHTEVHYGKSELAL 240

Query: 240 SRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWES 299
           SRFSSC+MLV Y AYLFFQLRGQT+LYVPLSE+ +Q G  AD G    D E PEISKWES
Sbjct: 241 SRFSSCVMLVVYAAYLFFQLRGQTDLYVPLSEEVSQNGEGADDG----DEETPEISKWES 296

Query: 300 LIWLAIMTAWISILSQYVVDAIEVT 324
           LIWL IMTAWISILS+Y+VDAIE T
Sbjct: 297 LIWLGIMTAWISILSEYLVDAIEGT 321




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494235|ref|XP_002269027.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] gi|296089995|emb|CBI39814.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485864|ref|XP_002266383.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|380039662|gb|AFD32369.1| CAX2 transporter [Sedum alfredii] Back     alignment and taxonomy information
>gi|380039664|gb|AFD32370.1| CAX2 transporter [Sedum alfredii] Back     alignment and taxonomy information
>gi|356524415|ref|XP_003530824.1| PREDICTED: vacuolar cation/proton exchanger 5-like [Glycine max] Back     alignment and taxonomy information
>gi|224056879|ref|XP_002299069.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222846327|gb|EEE83874.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297853280|ref|XP_002894521.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340363|gb|EFH70780.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30696001|ref|NP_175969.2| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|79320047|ref|NP_001031196.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|75154113|sp|Q8L783.1|CAX5_ARATH RecName: Full=Vacuolar cation/proton exchanger 5; AltName: Full=Ca(2+)/H(+) antiporter CAX5; AltName: Full=Ca(2+)/H(+) exchanger 5; AltName: Full=Protein CATION EXCHANGER 5 gi|22531156|gb|AAM97082.1| H+/Ca2+ antiporter, putative [Arabidopsis thaliana] gi|30387539|gb|AAP31935.1| At1g55730 [Arabidopsis thaliana] gi|222424383|dbj|BAH20147.1| AT1G55730 [Arabidopsis thaliana] gi|332195169|gb|AEE33290.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|332195170|gb|AEE33291.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449444449|ref|XP_004139987.1| PREDICTED: vacuolar cation/proton exchanger 5-like [Cucumis sativus] gi|402797833|gb|AFQ99298.1| cation exchanger CAX6 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query384
TAIR|locus:2020462441 CAX5 "cation exchanger 5" [Ara 0.783 0.682 0.653 1.6e-102
TAIR|locus:2088130441 CAX2 "cation exchanger 2" [Ara 0.765 0.666 0.66 3.8e-101
TAIR|locus:2074348459 CAX3 "cation exchanger 3" [Ara 0.736 0.616 0.423 5.2e-49
ASPGD|ASPL0000052404434 vcxA [Emericella nidulans (tax 0.614 0.543 0.400 1.9e-37
UNIPROTKB|G4NFU3 782 MGG_08710 "Vacuolar calcium io 0.546 0.268 0.426 1.1e-36
UNIPROTKB|G4NIP8 611 MGG_04159 "Calcium-proton exch 0.502 0.315 0.417 2.4e-36
CGD|CAL0005539416 VCX1 [Candida albicans (taxid: 0.700 0.646 0.364 8.3e-35
SGD|S000002286411 VCX1 "Vacuolar membrane antipo 0.625 0.583 0.386 3.2e-33
ASPGD|ASPL0000065939 742 AN7173 [Emericella nidulans (t 0.515 0.266 0.389 1.9e-32
GENEDB_PFALCIPARUM|PFF0170w441 PFF0170w "calcium antiporter, 0.481 0.419 0.413 1.3e-31
TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
 Identities = 204/312 (65%), Positives = 245/312 (78%)

Query:    11 ESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVC 70
             ++ +EMG ++D      E +SLF  + +S + +    ++ GS+S  F     K   NSV 
Sbjct:    11 QAQVEMGLVND-----VEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVL 65

Query:    71 RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
             +S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERLGYATEQL  +
Sbjct:    66 QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query:   131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
             TG+TVGGLLNATFGN TELIISI+ALKSGMIRVVQL+LLGSILSNMLLVLGCAFFCGGL+
Sbjct:   126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query:   191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
               +KEQVF+K +AVVNSGLLLMAVMGL+FPAVLHYTH+EVH G SELALSRFSSCIMLVA
Sbjct:   186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query:   251 YGAYLFFQLRGQTELYVPLSEDENQTXXXXXXXXXXXXXEAPEISKWESLIWLAIMTAWI 310
             Y AYLFFQL+ Q   Y PL+E+ NQ              E PEISKWE++IWL+I+TAW+
Sbjct:   246 YAAYLFFQLKSQPSSYTPLTEETNQNEETSDDD------EDPEISKWEAIIWLSILTAWV 299

Query:   311 SILSQYVVDAIE 322
             S+LS Y+VDAIE
Sbjct:   300 SLLSGYLVDAIE 311




GO:0006812 "cation transport" evidence=IEA;ISS
GO:0008324 "cation transmembrane transporter activity" evidence=IEA
GO:0015368 "calcium:cation antiporter activity" evidence=ISS
GO:0015491 "cation:cation antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065939 AN7173 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFF0170w PFF0170w "calcium antiporter, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L783CAX5_ARATHNo assigned EC number0.66020.78380.6825yesno
Q6K1C4CAX3_ORYSJNo assigned EC number0.62310.70050.6450yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query384
TIGR00846365 TIGR00846, caca2, calcium/proton exchanger 8e-62
TIGR00378349 TIGR00378, cax, calcium/proton exchanger (cax) 7e-47
COG0387368 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t 6e-46
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 4e-17
COG0530320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 1e-05
>gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger Back     alignment and domain information
 Score =  202 bits (516), Expect = 8e-62
 Identities = 112/252 (44%), Positives = 153/252 (60%), Gaps = 11/252 (4%)

Query: 71  RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
             ++ V+  + LN+L+ F P AI++      +  +F L+LLGI PLAER+ +ATEQL   
Sbjct: 5   SVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAHR 64

Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
            G T+GGLLNATFGNA ELIIS+ AL  G + VV+ SLLGSILSN+LLVLG + F GG I
Sbjct: 65  LGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGG-I 123

Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
              +EQ FN+ +A VNS LLL+A++ LV P  L             L LSR  + +ML+ 
Sbjct: 124 KNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDS---ILGLSRGIAIVMLIL 180

Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWI 310
           YGA+L FQL    +L+ P  E+ +   +D  H       E   IS W +  WL   T  +
Sbjct: 181 YGAFLVFQLVTHRQLFEP-QEEADSDYDDEVHE------EPTVISPWSAAAWLVGATIVV 233

Query: 311 SILSQYVVDAIE 322
           ++L++Y+VD IE
Sbjct: 234 ALLAEYLVDTIE 245


The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) Back     alignment and domain information
>gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 384
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 100.0
TIGR00378349 cax calcium/proton exchanger (cax). 100.0
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 100.0
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 100.0
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 100.0
PRK10599366 calcium/sodium:proton antiporter; Provisional 100.0
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 100.0
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.97
TIGR00927 1096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.86
KOG1307 588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.63
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 99.62
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 99.59
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.58
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 99.56
PLN03151 650 cation/calcium exchanger; Provisional 99.53
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.48
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.32
TIGR00378349 cax calcium/proton exchanger (cax). 99.31
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.29
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 98.76
PLN03151650 cation/calcium exchanger; Provisional 98.55
PRK10599366 calcium/sodium:proton antiporter; Provisional 98.42
TIGR00845 928 caca sodium/calcium exchanger 1. This model is spe 98.07
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 97.88
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 97.72
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 97.54
KOG2399 605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 97.47
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 97.34
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 95.85
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.9e-66  Score=506.12  Aligned_cols=318  Identities=49%  Similarity=0.737  Sum_probs=278.8

Q ss_pred             hhhhhccCCCCCCCCCCCCccchhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHH
Q 016726           41 KIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERL  120 (384)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~n~Ll~fvPl~i~~~~~~~~~~~vF~l~~laiiplA~~l  120 (384)
                      ++.+.+..+++++....++.+|+..++ +..++|++++++++|.++||+|+|+.+||..|++.|+|.+|+++++|+|+++
T Consensus        35 ~~~~~s~~~~k~~l~~~~~~~w~~~k~-~~~~l~~Vll~~~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l  113 (441)
T KOG1397|consen   35 HNMASSLLEKKSLLSLIKHAPWKYLKN-VLTNLQEVLLSTKLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERL  113 (441)
T ss_pred             cchhHHHHhhccchhhhhhhhhHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHH
Confidence            444444456666555667788888885 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCccchhhHHhhhcchhHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHhhhhccceeccceeEeec
Q 016726          121 GYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNK  200 (384)
Q Consensus       121 ~~ate~LA~~~G~~igGLl~atfGs~pELivsi~Al~~g~~~Iv~gniiGS~L~NlLLVLG~s~l~ggi~~~~~~q~f~~  200 (384)
                      ++++||||.++|+++||++||+|||++|+|+++.|+++|+.++||++++||+++|+|||+|+|+++||++  ||+|+||+
T Consensus       114 ~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~  191 (441)
T KOG1397|consen  114 GFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNI  191 (441)
T ss_pred             HHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeeccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997  79999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhhhcc-ccc---CCCccccchHHHHHHHHHHHHHHHHHHHHhhh--hccCCCccccc
Q 016726          201 ASAVVNSGLLLMAVMGLVFPAVLHYTHT-EVH---FGKSELALSRFSSCIMLVAYGAYLFFQLRGQT--ELYVPLSEDEN  274 (384)
Q Consensus       201 ~~a~~~ssllllav~~lllp~~~~~~~~-~~~---~~~~~~~lSr~~siiLL~~Y~~yL~fql~th~--~lf~~~~e~~~  274 (384)
                      +.|++++.+++++++++++|++++++++ +.+   .++..+.+||.++++|+++|++||+||+||||  ..|..++|+|+
T Consensus       192 ~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~~~~ee~~  271 (441)
T KOG1397|consen  192 KSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFPTPDEEET  271 (441)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccCCCCCCChhcc
Confidence            9999999999999999999999999887 222   23457899999999999999999999999966  44544433321


Q ss_pred             cCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhhHHhhhcchhHHhhhhhccCCcceeehhhhh---ccccchH
Q 016726          275 QTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHKISMVY---DFMDNCP  351 (384)
Q Consensus       275 ~~~~~~~~~g~~~~~~~~~~s~~~aii~Lvi~tvli~~~Se~LV~sI~~~~~ia~sfgis~~~IGlTiva---sLpel~~  351 (384)
                      ..|++     ..++||.|++++|++++||++.|++++++|||||++||+++   +++|+|+.+||++++.   +..|.+.
T Consensus       272 ~~d~~-----~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~---ds~~ls~~FiglillpiVgNaaEh~~  343 (441)
T KOG1397|consen  272 EQDDE-----VSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVS---DSWGLSVKFIGLILLPIVGNAAEHAG  343 (441)
T ss_pred             ccccc-----ccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCChhhheeeeecccCchHHhhc
Confidence            11111     11356788999999999999999999999999999999776   8999999999997775   6677777


Q ss_pred             HHHHHHhCCCeeeeeecc
Q 016726          352 PLFIICDGKWVLRLGNTR  369 (384)
Q Consensus       352 si~aa~kg~~dlaiGNi~  369 (384)
                      +|..|.|+|.|+++|=-+
T Consensus       344 AI~fA~k~kldLslgVai  361 (441)
T KOG1397|consen  344 AISFAMKDKLDLSLGVAI  361 (441)
T ss_pred             ceeeeecCcccchhhhhh
Confidence            799999999999988544



>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query384
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 2e-04
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 Back     alignment and structure
 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 44/184 (23%)

Query: 148 ELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNS 207
           E++ S YA       +   + +GS + N+ LVLG +     +I             +  +
Sbjct: 54  EILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLSAIISPIIV---------DKNLQKN 104

Query: 208 GLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYV 267
            L+ +  +       +                S     ++L+ +  YL + ++  +    
Sbjct: 105 ILVYLLFVIFAAVIGIDG-------------FSWIDGVVLLILFIIYLRWTVKNGSA--- 148

Query: 268 PLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDA---IEVT 324
                              ++N+    S   SL+ L I    + + ++  VD    I + 
Sbjct: 149 ----------------EIEENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALA 192

Query: 325 FGFS 328
              S
Sbjct: 193 LDIS 196


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query384
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 100.0
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 99.64
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-36  Score=298.09  Aligned_cols=223  Identities=20%  Similarity=0.172  Sum_probs=186.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ccchhhHHhhhc-chhHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHH
Q 016726          103 GWVFFLSLLGITPLAERLGYATEQLTFFTG--ATVGGLLNATFG-NATELIISIYALKSGMIRVVQLSLLGSILSNMLLV  179 (384)
Q Consensus       103 ~~vF~l~~laiiplA~~l~~ate~LA~~~G--~~igGLl~atfG-s~pELivsi~Al~~g~~~Iv~gniiGS~L~NlLLV  179 (384)
                      ...|+.+++.++++|++++++++++|+++|  +.++|++++++| |+||+++++.|..+|++|+++||++|||++|++++
T Consensus         6 ~~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillv   85 (320)
T 3v5u_A            6 VGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLV   85 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHH
Confidence            456899999999999999999999999998  999999999999 89999999999999999999999999999999999


Q ss_pred             HHHhhhhccceeccceeEeechhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCccccchHHHHHHHHHHHHHHHHHHH
Q 016726          180 LGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQL  259 (384)
Q Consensus       180 LG~s~l~ggi~~~~~~q~f~~~~a~~~ssllllav~~lllp~~~~~~~~~~~~~~~~~~lSr~~siiLL~~Y~~yL~fql  259 (384)
                      +|+|++++|++. +  +.+.     ....+++++++.+ ++..+            +. ++|++|++|+.+|+.|++|++
T Consensus        86 lG~~~li~p~~v-~--~~~~-----~d~~~~l~~~~~l-~~~~~------------~g-is~~~g~~Ll~~Y~~yl~~~~  143 (320)
T 3v5u_A           86 LGLSAIISPIIV-D--KNLQ-----KNILVYLLFVIFA-AVIGI------------DG-FSWIDGVVLLILFIIYLRWTV  143 (320)
T ss_dssp             HHHHHHHSCBCC-C--HHHH-----HHHHHHHHHHHHH-HHHTT------------TC-BCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccccc-c--HHHH-----HHHHHHHHHHHHH-HHHHH------------cc-cHHHHHHHHHHHHHHHHHHHH
Confidence            999999999874 2  2221     2222343333322 22111            23 899999999999999999999


Q ss_pred             HhhhhccCCCccccccCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhhHHhhhcchhHHhhhhhccCCcceee
Q 016726          260 RGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEVTFGFSTSLCCSDVYHK  339 (384)
Q Consensus       260 ~th~~lf~~~~e~~~~~~~~~~~~g~~~~~~~~~~s~~~aii~Lvi~tvli~~~Se~LV~sI~~~~~ia~sfgis~~~IG  339 (384)
                      ++|++      +++             +++++++.+.|+++++++++++++.++||++|++++   .+++.+|+|+.++|
T Consensus       144 ~~~~~------~~~-------------~~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~---~ia~~~gis~~~iG  201 (320)
T 3v5u_A          144 KNGSA------EIE-------------ENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAK---KIALALDISDKVIG  201 (320)
T ss_dssp             HHTBC--------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHTTCCCHHHH
T ss_pred             Hhccc------ccc-------------cccccccccHHHHHHHHHHHHHHHHHHHHhccccHH---HHHHHhCCchHHHH
Confidence            99874      111             111223467889999999999999999999999877   55689999999999


Q ss_pred             hhhhh---ccccchHHHHHHHhCCCeeeeeecc
Q 016726          340 ISMVY---DFMDNCPPLFIICDGKWVLRLGNTR  369 (384)
Q Consensus       340 lTiva---sLpel~~si~aa~kg~~dlaiGNi~  369 (384)
                      +|+++   ++||.++++.+++||+.|+++||++
T Consensus       202 ltlva~gtslPE~~~sv~aa~~g~~~laig~ii  234 (320)
T 3v5u_A          202 FTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVI  234 (320)
T ss_dssp             HHTHHHHHTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHhccHHHHHHHHHHHcCCCcHHHHHHH
Confidence            99987   9999999999999999999999998



>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00