Citrus Sinensis ID: 016743

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MCVQDAQEVENLNTNTNSVSSSWPLHFELLHHQMENLDKDSSFTSSNVQPTIGDSFPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG
ccccHHHHHHccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEEcccHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEccccccccccHHHHHHHHHcccEEEccccccHHHHHHHccccccccccccccccccccccccEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHcccccHHHHHHHHHHHcc
cccccccccEccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccEEccccccccccccccccEEEEccccccccccHHHHHEEHcccHHHcccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEcccEEEEEEcccccEEEEcccEEEEcccccccccHHHHHHHHHcccEEEcccccccEHHHHHccccccccccccccccccccccccEEEEEEccccEEEEEEccccHEccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccHHHHHccccHHHHHHHHHHHcc
MCVQDAQEVEnlntntnsvssswPLHFELLHHQMenldkdssftssnvqptigdsfplesisedTVSTVAERIQNMLTNFvpalrsgewsdigdrtymeDTHVCISDLAKkfgnklpgqeaisfygvfdghggngaAHFVrehlprvivedadfpldieKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAvelsedhrpdctKERMRIQSlggyiddgylngqlgvtralGDWHLEGmkemggrggplsaepelklvtltnedeflIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSfhleppphaaVQKAKVHRSISAEGLQNLRCLLEG
MCVQDAQEVenlntntnsvssSWPLHFELLHHQMENLDKDSSFTSSNVQptigdsfplesiSEDTVSTVAERIQNMLtnfvpalrsgeWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRgaavelsedhrpdctkERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEglqnlrclleg
MCVQDAQevenlntntnsvsssWPLHFELLHHQMENLDKDSSFTSSNVQPTIGDSFPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG
**********************WPLHFELL***********************************VSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVE***********ERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGM**************ELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLE******************************
********************************************************************************VPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKS*******SSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFH*************************LRCLL**
********VENLNTNTNSVSSSWPLHFELLHHQMENLDKDSSFTSSNVQPTIGDSFPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP************ISAEGLQNLRCLLEG
***************************************************************D*VSTVA***QNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP**********RSISAEGLQNLRC****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCVQDAQEVENLNTNTNSVSSSWPLHFELLHHQMENLDKDSSFTSSNVQPTIGDSFPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query383 2.2.26 [Sep-21-2011]
Q69QZ0354 Probable protein phosphat yes no 0.851 0.920 0.699 1e-135
Q5SMK6360 Probable protein phosphat no no 0.827 0.880 0.698 1e-130
Q9SLA1392 Probable protein phosphat yes no 0.906 0.885 0.532 1e-105
Q69VD9367 Probable protein phosphat no no 0.845 0.882 0.564 1e-104
P93006380 Probable protein phosphat no no 0.785 0.792 0.517 1e-90
Q9SD02361 Probable protein phosphat no no 0.788 0.836 0.5 6e-86
Q6AUQ4389 Probable protein phosphat no no 0.780 0.768 0.493 6e-76
Q9FYN7380 Probable protein phosphat no no 0.903 0.910 0.438 6e-75
Q3EAF9384 Probable protein phosphat no no 0.780 0.778 0.473 7e-73
Q9LNF4383 Probable protein phosphat no no 0.806 0.806 0.432 5e-70
>sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1 Back     alignment and function desciption
 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/329 (69%), Positives = 274/329 (83%), Gaps = 3/329 (0%)

Query: 56  FPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNK 115
           F +E + E+TVS   ++ ++  ++FVP +RSG+WSDIG R YMED HVCISDLA  FG+ 
Sbjct: 27  FEMEKVCENTVSLDFKQARS--SSFVPVIRSGDWSDIGGRDYMEDAHVCISDLANNFGHN 84

Query: 116 LPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLK 175
               E ISFYGVFDGHGG  AAH+VR++LPRVIVEDADFPL++EKVV RSF++TD+   +
Sbjct: 85  SVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAE 144

Query: 176 SCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRI 235
            CS ++ALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRG A+E+S+DHR  C  ER RI
Sbjct: 145 RCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRI 204

Query: 236 QSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLII 295
           +SLGGY+DDGYLNGQL VTRALGDWHLEG+KE+G  GGPLSAEPELK++TLT EDEFLII
Sbjct: 205 ESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLII 264

Query: 296 GSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPP 355
           GSDGIWD F++QNAV F R+RLQEHNDL+LCCK++V+EAI+RG +DNLT VMVSFH E P
Sbjct: 265 GSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGASDNLTAVMVSFHQEAP 324

Query: 356 PHAAVQK-AKVHRSISAEGLQNLRCLLEG 383
           P   V +  +V RSISAEGL +LR LLEG
Sbjct: 325 PQLRVNRTGRVERSISAEGLHSLRVLLEG 353

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q5SMK6|P2C54_ORYSJ Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1 Back     alignment and function description
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1 Back     alignment and function description
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1 Back     alignment and function description
>sp|P93006|P2C27_ARATH Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD02|P2C47_ARATH Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1 Back     alignment and function description
>sp|Q6AUQ4|P2C47_ORYSJ Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYN7|P2C02_ORYSJ Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1 Back     alignment and function description
>sp|Q3EAF9|P2C49_ARATH Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
255583492388 protein phosphatase 2c, putative [Ricinu 0.992 0.979 0.732 1e-166
224120426387 predicted protein [Populus trichocarpa] 0.992 0.981 0.739 1e-163
449442995382 PREDICTED: probable protein phosphatase 0.989 0.992 0.709 1e-159
357478441384 DNA-binding protein phosphatase 2C [Medi 0.989 0.986 0.715 1e-157
388506656384 unknown [Medicago truncatula] 0.989 0.986 0.712 1e-157
356565135383 PREDICTED: probable protein phosphatase 0.992 0.992 0.709 1e-154
388493030377 unknown [Lotus japonicus] 0.973 0.989 0.718 1e-153
356548559383 PREDICTED: probable protein phosphatase 0.992 0.992 0.717 1e-153
225463037356 PREDICTED: probable protein phosphatase 0.926 0.997 0.700 1e-151
224144053338 predicted protein [Populus trichocarpa] 0.845 0.958 0.797 1e-146
>gi|255583492|ref|XP_002532504.1| protein phosphatase 2c, putative [Ricinus communis] gi|223527779|gb|EEF29880.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/389 (73%), Positives = 330/389 (84%), Gaps = 9/389 (2%)

Query: 1   MCVQDA----QEVENLNTNTNSV---SSSWPLHFELLHHQMENLDKDSSFTSSNVQPTIG 53
           MCVQDA    QE+E L+   N+      SWPLH E+LH  MEN DK SSF +S+   ++ 
Sbjct: 1   MCVQDAEQVSQEMETLDNTNNNTTTKKQSWPLHCEVLHTHMENWDKGSSFINSSDGISVA 60

Query: 54  DSFPLESISEDTVSTVAERIQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFG 113
           DS PLESISED V+   ER QN+LTNF+P LRSGEWSDIG R YMEDTH+CI+DLAKKFG
Sbjct: 61  DSSPLESISEDRVAV--ERKQNLLTNFIPVLRSGEWSDIGGRPYMEDTHICINDLAKKFG 118

Query: 114 NKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAAL 173
             L  +E+ISFYGVFDGHGG  AA FVR+HLPRVI+EDADFPL++EKVV RSFIETDAA 
Sbjct: 119 YDLLSEESISFYGVFDGHGGKSAAQFVRDHLPRVIIEDADFPLELEKVVRRSFIETDAAF 178

Query: 174 LKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERM 233
            ++CS+ES+LSSGTT LTAMIFGRSLLVANAGDCRAVLSR G A+E+S+DHRP C +E+ 
Sbjct: 179 AETCSLESSLSSGTTVLTAMIFGRSLLVANAGDCRAVLSRGGTAIEMSKDHRPCCIREKT 238

Query: 234 RIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFL 293
           R++SLGGY++DGYLNGQLGVTRALGDWHLEGMK  G  GGPLSAEPELKL+TLT EDEFL
Sbjct: 239 RVESLGGYVEDGYLNGQLGVTRALGDWHLEGMKVKGEMGGPLSAEPELKLITLTKEDEFL 298

Query: 294 IIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLE 353
           IIGSDGIWDVF+SQN+V FARRRL+EHND+KLCCKEMV EAIKRG TDNLT+V+VSFHLE
Sbjct: 299 IIGSDGIWDVFSSQNSVAFARRRLREHNDVKLCCKEMVDEAIKRGATDNLTVVIVSFHLE 358

Query: 354 PPPHAAVQKAKVHRSISAEGLQNLRCLLE 382
           PPP+ AVQ+A+V RSISAEGLQ+L+CLL+
Sbjct: 359 PPPYVAVQRARVRRSISAEGLQSLKCLLQ 387

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120426|ref|XP_002331045.1| predicted protein [Populus trichocarpa] gi|222872975|gb|EEF10106.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449442995|ref|XP_004139266.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis sativus] gi|449493677|ref|XP_004159407.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357478441|ref|XP_003609506.1| DNA-binding protein phosphatase 2C [Medicago truncatula] gi|355510561|gb|AES91703.1| DNA-binding protein phosphatase 2C [Medicago truncatula] Back     alignment and taxonomy information
>gi|388506656|gb|AFK41394.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356565135|ref|XP_003550800.1| PREDICTED: probable protein phosphatase 2C 27-like [Glycine max] Back     alignment and taxonomy information
>gi|388493030|gb|AFK34581.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356548559|ref|XP_003542668.1| PREDICTED: probable protein phosphatase 2C 27-like [Glycine max] Back     alignment and taxonomy information
>gi|225463037|ref|XP_002267448.1| PREDICTED: probable protein phosphatase 2C 27 [Vitis vinifera] gi|296084566|emb|CBI25587.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224144053|ref|XP_002325169.1| predicted protein [Populus trichocarpa] gi|222866603|gb|EEF03734.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
TAIR|locus:2050296392 DBP1 "DNA-binding protein phos 0.903 0.882 0.536 6.6e-97
TAIR|locus:2057635380 PP2CG1 "protein phosphatase 2C 0.900 0.907 0.468 1.9e-83
TAIR|locus:2081785361 AT3G51470 [Arabidopsis thalian 0.788 0.836 0.503 5.4e-79
TAIR|locus:2098018384 AT3G62260 [Arabidopsis thalian 0.900 0.898 0.447 1.7e-68
TAIR|locus:2023812383 AT1G48040 [Arabidopsis thalian 0.898 0.898 0.417 1.2e-65
TAIR|locus:2089035422 AT3G17250 [Arabidopsis thalian 0.827 0.751 0.417 3.2e-65
ASPGD|ASPL0000056464420 AN1358 [Emericella nidulans (t 0.665 0.607 0.374 5.9e-41
TAIR|locus:2047344355 AT2G25070 [Arabidopsis thalian 0.472 0.509 0.370 2.2e-40
POMBASE|SPCC1223.11370 ptc2 "protein phosphatase 2C P 0.660 0.683 0.353 5.5e-38
GENEDB_PFALCIPARUM|PF11_0396924 PF11_0396 "Protein phosphatase 0.370 0.153 0.436 9.1e-38
TAIR|locus:2050296 DBP1 "DNA-binding protein phosphatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
 Identities = 190/354 (53%), Positives = 250/354 (70%)

Query:    35 ENLDKDSSFTSSNVQPTIGDSFPLESISEDTVSTVAE-RIQNMLTNFVPALRSGEWSDIG 93
             +  D + S    N +  +  S  ++++  D +S   E  I+   + FVPA RSG WSDIG
Sbjct:    39 QTFDGERSLAPCNKRSLVRHSSLVKTMVSD-ISVENEFTIEKNKSEFVPATRSGAWSDIG 97

Query:    94 DRTYMEDTHVCISDLAKKFG--NKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVED 151
              R+ MED ++C+ +    FG  N   G  A  FYGVFDGHGG  AA F   H+PR IVED
Sbjct:    98 SRSSMEDAYLCVDNFMDSFGLLNSEAGPSA--FYGVFDGHGGKHAAEFACHHIPRYIVED 155

Query:   152 ADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVL 211
              +FP +I KV++ +F++TD A L++CS++ +L+SGTTAL A++FGRSL+VANAGDCRAVL
Sbjct:   156 QEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVL 215

Query:   212 SRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEM--G 269
             SR+G A+E+S DH+P  +KER RI++ GG++ DGYLNGQL V RALGD+H+EGMK+   G
Sbjct:   216 SRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDG 275

Query:   270 GRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKE 329
                GPL AEPEL    LT EDEFLIIG DG+WDVF SQNAV FARRRLQEHND  +C KE
Sbjct:   276 SDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKE 335

Query:   330 MVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG 383
             +V+EA+KR   DN+T V+V    +PPP+    + +VHRS SAEGL++L+  L+G
Sbjct:   336 LVEEALKRKSADNVTAVVVCLQPQPPPNLVAPRLRVHRSFSAEGLKDLQSYLDG 389
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0050688 "regulation of defense response to virus" evidence=IMP
GO:0005634 "nucleus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2057635 PP2CG1 "protein phosphatase 2C G Group 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081785 AT3G51470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098018 AT3G62260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2023812 AT1G48040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089035 AT3G17250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPCC1223.11 ptc2 "protein phosphatase 2C Ptc2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF11_0396 PF11_0396 "Protein phosphatase 2C" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SLA1P2C22_ARATH3, ., 1, ., 3, ., 1, 60.53250.90600.8852yesno
Q69QZ0P2C27_ORYSJ3, ., 1, ., 3, ., 1, 60.69900.85110.9209yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01520038
hypothetical protein (387 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-154
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-84
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-79
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 9e-73
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 8e-36
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-28
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information 
 Score =  439 bits (1131), Expect = e-154
 Identities = 188/311 (60%), Positives = 233/311 (74%), Gaps = 2/311 (0%)

Query: 73  IQNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHG 132
            +NM T F+P +RSG W+DIG R+ MED ++C+ +    FG K       +FYGVFDGHG
Sbjct: 54  FENMDTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG 113

Query: 133 GNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTA 192
           G  AA F   HLPR IVED DFP +IEKVV+ +F++TD A  ++CS++++L+SGTTAL A
Sbjct: 114 GKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAA 173

Query: 193 MIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLG 252
           ++ GRSL+VANAGDCRAVL RRG A+E+S DH+P C+KER RI++ GGY+ DGYLNGQL 
Sbjct: 174 LVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLN 233

Query: 253 VTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGF 312
           V RALGDWH+EGMK  G  GGPLSAEPEL    LT EDEFLIIG DGIWDVF SQNAV F
Sbjct: 234 VARALGDWHMEGMK--GSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDF 291

Query: 313 ARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAE 372
           ARRRLQEHND  +C KE+V EA+KR   DNL +V+V F  +PPP+    + +V RSISAE
Sbjct: 292 ARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAE 351

Query: 373 GLQNLRCLLEG 383
           GL+ L+  L+ 
Sbjct: 352 GLRELQSFLDS 362

Length = 365
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.89
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.78
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.67
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.52
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.47
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.2e-64  Score=488.94  Aligned_cols=308  Identities=61%  Similarity=1.054  Sum_probs=275.6

Q ss_pred             hhccccCCcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC
Q 016743           74 QNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD  153 (383)
Q Consensus        74 ~~~~~~~~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~  153 (383)
                      ++....++|.++++++|++|.|+.|||++++..++...++..........||+|||||||+.+|++|++++++.|.+...
T Consensus        55 ~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~  134 (365)
T PLN03145         55 ENMDTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED  134 (365)
T ss_pred             ccchhhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc
Confidence            45566889999999999999999999999887665433333323334568999999999999999999999999988766


Q ss_pred             CchhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHH
Q 016743          154 FPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERM  233 (383)
Q Consensus       154 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~  233 (383)
                      ++..+.++|.++|..+|..+.+.........||||++++++.++.+|+|||||||+|++++|.+++||+||+|.++.|+.
T Consensus       135 ~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~  214 (365)
T PLN03145        135 FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERK  214 (365)
T ss_pred             cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHH
Confidence            66678899999999999999876554444569999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHH
Q 016743          234 RIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFA  313 (383)
Q Consensus       234 Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v  313 (383)
                      ||.+.||++..++++|.+.+||||||+.+|.++.  ..+++++++|++..+++.++|.|||||||||||+|+++++++++
T Consensus       215 RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~--~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i  292 (365)
T PLN03145        215 RIEASGGYVYDGYLNGQLNVARALGDWHMEGMKG--SDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFA  292 (365)
T ss_pred             HHHHcCCceecceECCcccccccccccccccccc--ccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHH
Confidence            9999999999999999999999999998886553  22345789999999999999999999999999999999999999


Q ss_pred             HHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCChhhhccccccccChhhHHHhHhhhcC
Q 016743          314 RRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG  383 (383)
Q Consensus       314 ~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  383 (383)
                      +..+....+++++|+.|++.|+.+++.||+|||||+|+..++|.....|+++++++++++|++|+++|.+
T Consensus       293 ~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (365)
T PLN03145        293 RRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDS  362 (365)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhc
Confidence            8888777899999999999999999999999999999999999999999999999999999999999863

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-37
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-36
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-34
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 1e-34
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-29
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 5e-29
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-28
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-27
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-27
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 5e-24
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 5e-24
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 5e-24
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-24
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-24
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 6e-24
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-24
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 4e-18
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 4e-11
2j4o_A401 Structure Of Tab1 Length = 401 1e-09
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-09
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 3e-08
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 6e-08
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 2e-04
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 2e-04
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 7e-04
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 152/291 (52%), Gaps = 34/291 (11%)
Query: 84  LRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREH 143
           L SG  S  G R   ED H CI          L   +  SF+ V+DGHGG   A +   H
Sbjct: 23  LASGSSSMQGWRISQEDAHNCI----------LNFDDQCSFFAVYDGHGGAEVAQYCSLH 72
Query: 144 LPRVI-VEDADFPLDIEKVVTRSFIETDAALLKSCSIE--------SALS-------SGT 187
           LP  +   +A    + EK +  +F+  DA LL+   IE        SA S       SG 
Sbjct: 73  LPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGC 132
Query: 188 TALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYID-DGY 246
           TA+ A++ G+ L VANAGD R V+ R G A+E+S DH+P+ T E  RI+  GG +  DG 
Sbjct: 133 TAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDGR 192
Query: 247 LNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTS 306
           +NG L ++RA+GD   +  K +      +SA P+++ +T+  EDEF+++  DGIW+  TS
Sbjct: 193 VNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTS 252
Query: 307 QNAVGFARRRLQEHN-DLKLCCKEMVKEAI---KRG---GTDNLTIVMVSF 350
           +  V F + R+ +    L   C+E+    +    RG   G DN+T ++V F
Sbjct: 253 EQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQF 303
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-116
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-114
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-108
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-104
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-104
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-103
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-102
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-98
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-84
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-70
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-68
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-64
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-48
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-05
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-17
1txo_A237 Putative bacterial enzyme; serine/threonine protei 9e-16
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 4e-15
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 4e-15
3rnr_A211 Stage II sporulation E family protein; structural 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
 Score =  338 bits (870), Expect = e-116
 Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 21/292 (7%)

Query: 80  FVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHF 139
               LR G  S  G R  MED H  +  +         G E  SF+ V+DGH G+  A++
Sbjct: 20  AGNGLRYGLSSMQGWRVEMEDAHTAVVGIP-------HGLEDWSFFAVYDGHAGSRVANY 72

Query: 140 VREHLPRVIVEDADFPL-------------DIEKVVTRSFIETDAALLKSCSIESAL-SS 185
              HL   I  + DF               +++  +   F++ D  +     + + +  S
Sbjct: 73  CSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRS 132

Query: 186 GTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDG 245
           G+TA+  MI  + +   N GD RAVL R G     ++DH+P   +E+ RIQ+ GG +   
Sbjct: 133 GSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQ 192

Query: 246 YLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFT 305
            +NG L V+RALGD+  + +   G     +S EPE+  +    EDEF+I+  DGIWDV +
Sbjct: 193 RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMS 252

Query: 306 SQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPH 357
           ++    + + RL+  +DL+  C  +V   + +G  DN++IV+V F  E   H
Sbjct: 253 NEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEGHHH 304
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.88
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.86
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.78
3f79_A255 Probable two-component response regulator; adaptor 99.76
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.35
3eq2_A394 Probable two-component response regulator; adaptor 98.58
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.6e-53  Score=409.90  Aligned_cols=266  Identities=34%  Similarity=0.570  Sum_probs=230.6

Q ss_pred             cceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-------
Q 016743           82 PALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-------  154 (383)
Q Consensus        82 ~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-------  154 (383)
                      ..++++.+|++|+|..|||++++...+..       ......+|+|||||||+.+|++|++.+++.|.+...+       
T Consensus        22 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~-------~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~   94 (307)
T 2p8e_A           22 NGLRYGLSSMQGWRVEMEDAHTAVVGIPH-------GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSG   94 (307)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT-------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC------
T ss_pred             CCeeEEEEecCCCCCcccceEEEEecCCC-------CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccc
Confidence            46899999999999999999988765320       1135789999999999999999999999999763322       


Q ss_pred             ------chhHHHHHHHHHHHHhHHHHhhhccc-cccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCC
Q 016743          155 ------PLDIEKVVTRSFIETDAALLKSCSIE-SALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPD  227 (383)
Q Consensus       155 ------~~~~~~~l~~a~~~~~~~i~~~~~~~-~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~  227 (383)
                            ...+.++|.++|..+|+.|.+..... ....+|||++++++.++++|+|||||||+|++|+|++++||+||+|.
T Consensus        95 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~  174 (307)
T 2p8e_A           95 SALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPC  174 (307)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTT
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCC
Confidence                  23568899999999999998764322 23469999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChH
Q 016743          228 CTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQ  307 (383)
Q Consensus       228 ~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~  307 (383)
                      .+.|+.||...||.+..+|++|.+.+||||||..+|.....+...+.+.++|++..+++.++|+|||||||||||+++++
T Consensus       175 ~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~  254 (307)
T 2p8e_A          175 NPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNE  254 (307)
T ss_dssp             SHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred             CHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHH
Confidence            99999999999999999999999999999999998876554444566789999999999999889999999999999999


Q ss_pred             HHHHHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCC
Q 016743          308 NAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEP  354 (383)
Q Consensus       308 ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~  354 (383)
                      ++++++...+....+++++|+.|++.|+.+|+.||+|||||++...+
T Consensus       255 ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          255 ELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence            99999988766677999999999999999999999999999997643
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 383
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 5e-57
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-23
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (472), Expect = 5e-57
 Identities = 88/281 (31%), Positives = 138/281 (49%), Gaps = 17/281 (6%)

Query: 84  LRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREH 143
           LR G  S  G R  MED H  +  L         G E+ SF+ V+DGH G+  A +  EH
Sbjct: 21  LRYGLSSMQGWRVEMEDAHTAVIGLPS-------GLESWSFFAVYDGHAGSQVAKYCCEH 73

Query: 144 LPRVIVEDADFPLD--------IEKVVTRSFIETDAALLKSCSIESALS-SGTTALTAMI 194
           L   I  + DF           ++  +   F+E D  +      +     SG+TA+  +I
Sbjct: 74  LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLI 133

Query: 195 FGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVT 254
             +     N GD R +L R       ++DH+P    E+ RIQ+ GG +    +NG L V+
Sbjct: 134 SPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVS 193

Query: 255 RALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNED-EFLIIGSDGIWDVFTSQNAVGFA 313
           RALGD+  + +   G     +S EPE+  +  + ED +F+I+  DGIWDV  ++    F 
Sbjct: 194 RALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 253

Query: 314 RRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEP 354
           R RL+  +DL+  C E+V   + +G  DN++++++ F   P
Sbjct: 254 RSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-56  Score=424.44  Aligned_cols=267  Identities=32%  Similarity=0.546  Sum_probs=237.6

Q ss_pred             CcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC--------
Q 016743           81 VPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA--------  152 (383)
Q Consensus        81 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~--------  152 (383)
                      ...++||++|++|+|++|||+|++..++..       ......||||||||||+.+|++|++++++.|.+..        
T Consensus        18 ~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~-------~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~   90 (295)
T d1a6qa2          18 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPS-------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGA   90 (295)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT-------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSS
T ss_pred             CCceEEEEEeCccCCCcccCeeEEEcccCC-------CCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcccccc
Confidence            346899999999999999999998876531       22467899999999999999999999999987532        


Q ss_pred             CCchhHHHHHHHHHHHHhHHHHhhhccc-cccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHH
Q 016743          153 DFPLDIEKVVTRSFIETDAALLKSCSIE-SALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKE  231 (383)
Q Consensus       153 ~~~~~~~~~l~~a~~~~~~~i~~~~~~~-~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E  231 (383)
                      .....+.++|+++|.++++.+....... ....+|||++++++.++++|+||+||||+|+++++.+++||.||+|..+.|
T Consensus        91 ~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E  170 (295)
T d1a6qa2          91 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE  170 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHH
Confidence            1234678899999999999987654332 233699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEec-CCCeEEEEecccccCcCChHHHH
Q 016743          232 RMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLT-NEDEFLIIGSDGIWDVFTSQNAV  310 (383)
Q Consensus       232 ~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~-~~d~fLIL~SDGlwd~l~~~ei~  310 (383)
                      +.||.+.||.+...+++|.+++||||||+.+|.........+.++++|++..+++. +++.|||||||||||++++++++
T Consensus       171 ~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~  250 (295)
T d1a6qa2         171 KERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC  250 (295)
T ss_dssp             HHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred             HhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHH
Confidence            99999999999999999999999999999999877666677789999999999986 56779999999999999999999


Q ss_pred             HHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCC
Q 016743          311 GFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEP  354 (383)
Q Consensus       311 ~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~  354 (383)
                      ++|+..+....+++.+|+.|++.|+.+|+.||+|||||+|+..|
T Consensus       251 ~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         251 DFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             HHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            99998888888999999999999999999999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure