Citrus Sinensis ID: 016745


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MSRYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
cHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHcccccccccccccccccccccEEEEccEEEcEEEEEEEEccccccccEEEEEccccccccccccEEEEEcccccEEEEEEEcccEEEEEcccccHHHHHHHHHccEEEEEcccHHHHHHHHHHHHHcccccccHHHHccHHHHHHHHcccEEEccccccccccccccccccEEEEEEcccccccHHHHHHHHcccccccEEEEEEcccccEEEEEcccccccccccEEEccHHHHHHHHHcccccccEEEEEccHHHHHHccHHHHHHHHHHHccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccc
ccHHHHHHHHHHHHHHHHHcccccccHccccccccHHHHHHHHHHHHcHHHHcHHEHEEcccccccEEEEccEEEccEEEEEEEccccccccEEEEEEEcccccccHcEEEEEEcccEEEEHHEEEccccEEEEcccccHHHHHHHHHccEEEEEccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEcccccEEEEccHHHcccccEEEEEEEccccccHHHHHHHHcccccccEEEEEEcccccEEEEEccccccccccEEEEccHHHHHHHHHHccccccEEEEcccHHHHHHHcHHHHHHHHHHccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccc
MSRYLLVLLLCFLglgfgqgfkvpfrvndvlpvlprqlswpvlnnfhsavdllpyyvgsvtpnngsidwkgacfygnearleftegdrepaggilylktsdahswTCMDLYvfatpyrvtWDYYFSAREhtlkfdsweepaeleyVKQHGVSVflmpsgmmgtLLSLIDilplfsnshwgqnANLAFLEKHmgatfekrpqpwhatinpedvhsgdfLAVSKirgrwggfeTLEKWVTGAFAGHTAVCLkdkegnlwvgesghenekgeEIIVVIPWDEWWElalkddsnpqiallplhpdvrakFNSTAAWEYARsmsgkpygyhNMIFSWIdtmadnypppldAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
MSRYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHAtinpedvhsGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVgesghenekgeEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
MSRYllvlllcflglgfgqgfKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
***YLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEV***
**RYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVL**
MSRYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
*SRYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRYLLVLLLCFLGLGFGQGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGTEVLCA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
225424793 520 PREDICTED: uncharacterized protein LOC10 0.994 0.732 0.844 0.0
449434877 524 PREDICTED: uncharacterized protein LOC10 0.979 0.715 0.841 0.0
255558362 527 conserved hypothetical protein [Ricinus 0.963 0.700 0.854 0.0
312282015 521 unnamed protein product [Thellungiella h 0.958 0.704 0.856 0.0
357486259 522 hypothetical protein MTR_5g036420 [Medic 0.984 0.722 0.839 0.0
18409461 523 uncharacterized protein [Arabidopsis tha 0.958 0.701 0.848 0.0
224100399 514 predicted protein [Populus trichocarpa] 0.926 0.690 0.883 0.0
356567591 531 PREDICTED: uncharacterized protein LOC10 0.976 0.704 0.832 0.0
297838803 525 hypothetical protein ARALYDRAFT_476140 [ 0.958 0.699 0.837 0.0
356498046 518 PREDICTED: uncharacterized protein LOC10 0.937 0.693 0.848 0.0
>gi|225424793|ref|XP_002270582.1| PREDICTED: uncharacterized protein LOC100251867 [Vitis vinifera] gi|296086489|emb|CBI32078.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/385 (84%), Positives = 353/385 (91%), Gaps = 4/385 (1%)

Query: 1   MSRYLLVLLLCFLGLGFG----QGFKVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYY 56
           MS +  +  LC LGLGFG      FKVPFRV DVLP LPRQ+SWPVLNN HSAVDLLP +
Sbjct: 1   MSLFSFLGFLCILGLGFGFDHGHAFKVPFRVKDVLPALPRQISWPVLNNLHSAVDLLPAF 60

Query: 57  VGSVTPNNGSIDWKGACFYGNEARLEFTEGDREPAGGILYLKTSDAHSWTCMDLYVFATP 116
           VGSVTP NGSI+WKGACFYGN+ARL+FT GDR   GG+LYL T++AHSWTCMDLYVFATP
Sbjct: 61  VGSVTPGNGSIEWKGACFYGNQARLQFTSGDRGLGGGVLYLTTAEAHSWTCMDLYVFATP 120

Query: 117 YRVTWDYYFSAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSN 176
           YRVTWDYYFSAREH L+ +SWEEPAELEYVKQHG+SVFLMPSGM+GTLLSLID+LPLFSN
Sbjct: 121 YRVTWDYYFSAREHKLEIESWEEPAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSN 180

Query: 177 SHWGQNANLAFLEKHMGATFEKRPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKW 236
           + WGQ+ANL FL+ HMGATFEKRPQPW  TINPEDVHSGDFLAVSKIRGRWGGFETLEKW
Sbjct: 181 TAWGQSANLDFLKNHMGATFEKRPQPWRVTINPEDVHSGDFLAVSKIRGRWGGFETLEKW 240

Query: 237 VTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALL 296
           VTGAFAGHTAVCLKD+EGNLWVGESGHENEKGEEIIVV+PWDEWWEL+LKD+SNPQIALL
Sbjct: 241 VTGAFAGHTAVCLKDEEGNLWVGESGHENEKGEEIIVVMPWDEWWELSLKDNSNPQIALL 300

Query: 297 PLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMW 356
           PLHPD+RAKFN+TAAWEYARSM+GKPYGYHNMIFSWIDT+ADNYPPPLDAHLV+SVMSMW
Sbjct: 301 PLHPDLRAKFNATAAWEYARSMAGKPYGYHNMIFSWIDTIADNYPPPLDAHLVISVMSMW 360

Query: 357 TRVQPAYAANMWNEALNKRLGTEVL 381
           TR+QPAYA NMWNEALNKRL TE L
Sbjct: 361 TRMQPAYAENMWNEALNKRLETEDL 385




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434877|ref|XP_004135222.1| PREDICTED: uncharacterized protein LOC101209749 [Cucumis sativus] gi|449478519|ref|XP_004155340.1| PREDICTED: uncharacterized LOC101209749 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255558362|ref|XP_002520208.1| conserved hypothetical protein [Ricinus communis] gi|223540700|gb|EEF42263.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|312282015|dbj|BAJ33873.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|357486259|ref|XP_003613417.1| hypothetical protein MTR_5g036420 [Medicago truncatula] gi|355514752|gb|AES96375.1| hypothetical protein MTR_5g036420 [Medicago truncatula] Back     alignment and taxonomy information
>gi|18409461|ref|NP_564985.1| uncharacterized protein [Arabidopsis thaliana] gi|13430576|gb|AAK25910.1|AF360200_1 unknown protein [Arabidopsis thaliana] gi|15293161|gb|AAK93691.1| unknown protein [Arabidopsis thaliana] gi|332196905|gb|AEE35026.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224100399|ref|XP_002311861.1| predicted protein [Populus trichocarpa] gi|222851681|gb|EEE89228.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356567591|ref|XP_003552001.1| PREDICTED: uncharacterized protein LOC100815535 [Glycine max] Back     alignment and taxonomy information
>gi|297838803|ref|XP_002887283.1| hypothetical protein ARALYDRAFT_476140 [Arabidopsis lyrata subsp. lyrata] gi|297333124|gb|EFH63542.1| hypothetical protein ARALYDRAFT_476140 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356498046|ref|XP_003517865.1| PREDICTED: uncharacterized protein LOC100805887 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
TAIR|locus:2020553 523 AT1G70160 "AT1G70160" [Arabido 0.939 0.688 0.862 8.1e-179
TAIR|locus:2116347 523 AT4G27020 "AT4G27020" [Arabido 0.939 0.688 0.671 1.5e-145
TAIR|locus:2160165 531 AT5G54870 "AT5G54870" [Arabido 0.939 0.677 0.660 4.8e-142
TAIR|locus:2020553 AT1G70160 "AT1G70160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1736 (616.2 bits), Expect = 8.1e-179, P = 8.1e-179
 Identities = 313/363 (86%), Positives = 337/363 (92%)

Query:    22 KVPFRVNDVLPVLPRQLSWPVLNNFHSAVDLLPYYVGSVTPNNGSIDWKGACFYGNEARL 81
             KVPF VNDVLP+LPRQ+SWPVLN+FH+AVDLLP ++GSVTPNN SI+WKGACF GNEARL
Sbjct:    26 KVPFSVNDVLPMLPRQVSWPVLNSFHNAVDLLPVFIGSVTPNNVSIEWKGACFNGNEARL 85

Query:    82 EFTEGDRE-PA--GGILYLKTSDAHSWTCMDLYVFATPYRVTWDYYFSAREHTLKFDSWE 138
             + T  DR+ P   GG+L+LKTS AHS TCMDLYVFATPYR+TWDYYFSAR+HTL FDSWE
Sbjct:    86 DITGSDRDVPGLGGGVLHLKTSKAHSLTCMDLYVFATPYRITWDYYFSARDHTLNFDSWE 145

Query:   139 EPAELEYVKQHGVSVFLMPSGMMGTLLSLIDILPLFSNSHWGQNANLAFLEKHMGATFEK 198
             E AELEYVK+HGVSVFLMPSGM+GTLLSLID+LPLFSN+ WGQNANLAFL KHMGATFEK
Sbjct:   146 EKAELEYVKEHGVSVFLMPSGMLGTLLSLIDVLPLFSNTAWGQNANLAFLTKHMGATFEK 205

Query:   199 RPQPWHATINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWV 258
             R QPW + INPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKD  GNLWV
Sbjct:   206 RSQPWRSMINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDDLGNLWV 265

Query:   259 GESGHENEKGEEIIVVIPWDEWWELALKDDSNPQIALLPLHPDVRAKFNSTAAWEYARSM 318
             GESGHENEKGEEIIVVIPWDEWWEL LKD+SNPQ+ALLPLHPD+RAKFN+TAAWEYARSM
Sbjct:   266 GESGHENEKGEEIIVVIPWDEWWELTLKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSM 325

Query:   319 SGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMSMWTRVQPAYAANMWNEALNKRLGT 378
              GKPYGYHNMIFSWIDT+ DNYPPPLDAHLV+SVMSMWTRVQPAYAANMWNEALNKRLGT
Sbjct:   326 LGKPYGYHNMIFSWIDTLGDNYPPPLDAHLVISVMSMWTRVQPAYAANMWNEALNKRLGT 385

Query:   379 EVL 381
             E L
Sbjct:   386 EDL 388




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2116347 AT4G27020 "AT4G27020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160165 AT5G54870 "AT5G54870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00028917001
SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (520 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
PF05708158 DUF830: Orthopoxvirus protein of unknown function 98.5
PRK10030197 hypothetical protein; Provisional 98.36
PRK11470200 hypothetical protein; Provisional 98.01
PRK11479274 hypothetical protein; Provisional 97.18
>PF05708 DUF830: Orthopoxvirus protein of unknown function (DUF830); PDB: 2IF6_B 3KW0_C Back     alignment and domain information
Probab=98.50  E-value=4.9e-07  Score=77.37  Aligned_cols=116  Identities=21%  Similarity=0.306  Sum_probs=79.3

Q ss_pred             CCCCCEEEEEeecccCCchhhHHHhhcCcCccceeEEeecCCCcEEEEec-CCCCcccccceeecchhHHHHHHhccCCC
Q 016745          212 VHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGES-GHENEKGEEIIVVIPWDEWWELALKDDSN  290 (383)
Q Consensus       212 IhsGDfL~iski~gr~dG~d~li~W~tGs~aGHtav~Lrd~dGeL~v~ES-~~~~~~~~~~Iq~~pweeW~~~~~kd~a~  290 (383)
                      .++||.|...-   . +.+...|.=+|++..||.+|.+.+.+++.+|+|+ -..      +++..++++|..    +  +
T Consensus         2 l~~GDIil~~~---~-~~~s~~i~~~t~~~~~HvgI~~~~~~~~~~viea~~~~------Gv~~~~l~~~~~----~--~   65 (158)
T PF05708_consen    2 LQTGDIILTRG---K-SSLSKAIRPVTSSPYSHVGIVIGDEGQEPYVIEATPGD------GVRLEPLSDFLK----R--N   65 (158)
T ss_dssp             --TT-EEEEEE-----SCCHHHHHHHHTSS--EEEEEEEETTE-EEEEEEETTT------CEEEEECHHHHH----C--C
T ss_pred             CCCeeEEEEEC---C-chHHHHHHHHhCCCCCEEEEEEecCCCceEEEEeccCC------CeEEeeHHHHhc----C--C
Confidence            58999998873   3 7789999999999999999999987788999999 333      699999999964    3  4


Q ss_pred             CcEEEeeCChHHHhhcchHHHHHHHHhhcCCcceeeeeeEEEEecCCCCCCCCCChhHHHHHH
Q 016745          291 PQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVM  353 (383)
Q Consensus       291 ~~ValLPL~~e~RakFN~TAAwef~~~~eG~PYGYhN~iFsWIDT~~dNyPppLd~~~v~~v~  353 (383)
                      -+++++.+++. +..=...+|.+++++..|+||++--.+.      ++.   -.=++||+-++
T Consensus        66 ~~~~V~r~~~~-~~~~~~~~~~~~a~~~~g~~Y~~~~~~~------~~~---~yCSelV~~~y  118 (158)
T PF05708_consen   66 EKIAVYRLKDP-LSEEQRQKAAEFAKSYIGKPYDFNFSLD------DDR---FYCSELVAEAY  118 (158)
T ss_dssp             CEEEEEEECCG-TTCHHHHHHHHHHHCCTTS-B-CC-HCC------SSS---B-HHHHHHHHH
T ss_pred             ceEEEEEECCC-CCHHHHHHHHHHHHHHcCCCccccccCC------CCC---EEcHHHHHHHH
Confidence            46888888877 3233345678899999999999863333      221   22247776666



>PRK10030 hypothetical protein; Provisional Back     alignment and domain information
>PRK11470 hypothetical protein; Provisional Back     alignment and domain information
>PRK11479 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
3kw0_A214 Cysteine peptidase; structural genomics, joint cen 98.63
2if6_A186 Hypothetical protein YIIX; structural genomics, me 98.49
>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus} Back     alignment and structure
Probab=98.63  E-value=1.5e-07  Score=85.68  Aligned_cols=103  Identities=16%  Similarity=0.191  Sum_probs=81.3

Q ss_pred             CCCCCCCCEEEEEeecccCCchhhHHHhhcCcCccceeEEeecCCCcEEEEecCCCCcccccceeecchhHHHHHHhcc-
Q 016745          209 PEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKD-  287 (383)
Q Consensus       209 ~~dIhsGDfL~iski~gr~dG~d~li~W~tGs~aGHtav~Lrd~dGeL~v~ES~~~~~~~~~~Iq~~pweeW~~~~~kd-  287 (383)
                      .+++++||.|.++   |+ +.++.+|+++|+|..+|.+|.+.+ +++++|+|+..     ..+|+..|+++|.+ .+.. 
T Consensus        37 ~~~l~~GDlif~~---~~-~~~s~~I~~~T~s~~sHvgI~~~~-~~~~~vieA~~-----~~GV~~~~L~~fl~-~~~~~  105 (214)
T 3kw0_A           37 INVLKTGDIFLCS---GN-YLVSKLIKKVSESMFSHTGIIVKW-GEHTLIMESVE-----DDGVRIVPLEHYIK-NYENS  105 (214)
T ss_dssp             TTTCCTTCEEEEE---EC-SHHHHHHHHHTTSSCCEEEEEEEE-TTEEEEEEEET-----TTEEEEEETHHHHH-CGGGS
T ss_pred             HhhCCCCCEEEEe---CC-CcHHHHHHHhcCCCCcEEEEEEec-CCceEEEEecC-----CCCEEEecHHHHHH-Hhhcc
Confidence            6799999999996   34 778999999999999999999987 78999999953     35699999999975 1211 


Q ss_pred             --CCCCcEEEee--------CChHHHhhcchHHHHHHHHhhcCCcceeee
Q 016745          288 --DSNPQIALLP--------LHPDVRAKFNSTAAWEYARSMSGKPYGYHN  327 (383)
Q Consensus       288 --~a~~~ValLP--------L~~e~RakFN~TAAwef~~~~eG~PYGYhN  327 (383)
                        ..+-.|++..        |.+|.++     ++.+|+++..|+||.+.+
T Consensus       106 ~~~y~~~i~V~Rl~~~~~v~lt~~~~~-----~l~~~a~~~lGkpYd~~~  150 (214)
T 3kw0_A          106 NNRYNGSLFIARHELLQNVNDDSEMIR-----NLIKVGFSLLNSGYDKNE  150 (214)
T ss_dssp             SSCCSEEEEEEEEGGGTTSCTTSHHHH-----HHHHHHHHHCCSCCCHHH
T ss_pred             cccccCceEEEEeccccccCCCHHHHH-----HHHHHHHHhcCCCCCcHH
Confidence              2223577764        5555554     588999999999999854



>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
d2if6a1182 Hypothetical protein YiiX {Escherichia coli [TaxId 98.72
>d2if6a1 d.3.1.21 (A:19-200) Hypothetical protein YiiX {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: YiiX-like
domain: Hypothetical protein YiiX
species: Escherichia coli [TaxId: 562]
Probab=98.72  E-value=1.3e-08  Score=86.15  Aligned_cols=118  Identities=17%  Similarity=0.245  Sum_probs=87.6

Q ss_pred             CCCCCCEEEEEeecccCCchhhHHHhhcCcCccceeEEeecCCCcEEEEecCCCCcccccceeecchhHHHHHHhccCCC
Q 016745          211 DVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDKEGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDDSN  290 (383)
Q Consensus       211 dIhsGDfL~iski~gr~dG~d~li~W~tGs~aGHtav~Lrd~dGeL~v~ES~~~~~~~~~~Iq~~pweeW~~~~~kd~a~  290 (383)
                      +.|+||.|.++   |+ +.++.+|+++|+|.-+|.+|++.. +|+.+|+|+..       .|+..+.++|..    ...+
T Consensus         2 q~q~GDIlf~~---~~-s~~s~aI~~~T~s~~sHvgIv~~~-~~~~~v~~a~~-------~V~~~~l~~f~~----~~~~   65 (182)
T d2if6a1           2 QPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMLVMR-NKKPYVFEAVG-------PVKYTPLKQWIA----HGEK   65 (182)
T ss_dssp             CCCTTCEEEEC---CC-STTHHHHHHHHTSSCCEEEEEEEE-TTEEEEEEESS-------SEEEEEHHHHHH----TSGG
T ss_pred             CCCCccEEEEe---CC-CcHHHHHHHHhCCCCceEEEEEEe-CCeEEEEeecc-------cEEEeechHhhh----hcCC
Confidence            46899998884   44 779999999999999999999875 89999999853       489999999974    3334


Q ss_pred             CcEEEeeCChHHHhhcchHHHHHHHHhhcCCcceeeeeeEEEEecCCCCCCCCCChhHHHHHHH
Q 016745          291 PQIALLPLHPDVRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTMADNYPPPLDAHLVVSVMS  354 (383)
Q Consensus       291 ~~ValLPL~~e~RakFN~TAAwef~~~~eG~PYGYhN~iFsWIDT~~dNyPppLd~~~v~~v~s  354 (383)
                      .++++..+++++.+.. ..++.+++++..|+||.++.   .+ |+  +   .-.=++||+-++.
T Consensus        66 ~~~~v~R~~~~~~~~~-~~~~~~~a~~~lGkpYd~~f---~~-~~--~---~~yCSelV~~ay~  119 (182)
T d2if6a1          66 GKYVVRRVEGGLSVEQ-QQKLAQTAKRYLGKPYDFSF---SW-SD--D---RQYCSEVVWKVYQ  119 (182)
T ss_dssp             GCEEEEEETTCCCHHH-HHHHHHHHGGGTTCCBCTTC---CS-SS--S---SBCHHHHHHHHHH
T ss_pred             CCEEEEEecCCCCHHH-HHHHHHHHHHhcCCCCcccc---cC-CC--C---cEEHHHHHHHHHH
Confidence            4577776666554442 35667899999999999862   22 11  1   1234588888874