Citrus Sinensis ID: 016755
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | 2.2.26 [Sep-21-2011] | |||||||
| Q8CFV9 | 155 | Riboflavin kinase OS=Mus | yes | no | 0.391 | 0.967 | 0.466 | 1e-36 | |
| Q969G6 | 155 | Riboflavin kinase OS=Homo | yes | no | 0.381 | 0.941 | 0.465 | 7e-36 | |
| Q08623 | 228 | Pseudouridine-5'-monophos | no | no | 0.558 | 0.938 | 0.399 | 4e-34 | |
| O74866 | 163 | Riboflavin kinase OS=Schi | yes | no | 0.368 | 0.865 | 0.478 | 4e-33 | |
| O76206 | 153 | Putative riboflavin kinas | yes | no | 0.381 | 0.954 | 0.466 | 6e-33 | |
| Q9D5U5 | 234 | Pseudouridine-5'-monophos | no | no | 0.561 | 0.918 | 0.388 | 4e-32 | |
| Q94529 | 231 | Probable pseudouridine-5' | no | no | 0.569 | 0.943 | 0.373 | 2e-30 | |
| Q75DY2 | 186 | Riboflavin kinase OS=Ashb | no | no | 0.339 | 0.698 | 0.377 | 2e-25 | |
| A4QQ05 | 200 | Riboflavin kinase OS=Magn | N/A | no | 0.331 | 0.635 | 0.440 | 6e-24 | |
| A5DAH9 | 180 | Riboflavin kinase OS=Meye | N/A | no | 0.334 | 0.711 | 0.358 | 8e-23 |
| >sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 106/150 (70%)
Query: 232 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 291
+ S P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+K
Sbjct: 1 MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60
Query: 292 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 351
MV+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I
Sbjct: 61 MVVSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQ 120
Query: 352 EDRKVAERALDLPLYSKYRDDPYLKITSSK 381
D + A++ LDLP + K +DD + +++ K
Sbjct: 121 GDIEEAKKQLDLPEHLKLKDDNFFQVSKGK 150
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN). Mus musculus (taxid: 10090) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q969G6|RIFK_HUMAN Riboflavin kinase OS=Homo sapiens GN=RFK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 105/146 (71%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 65 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124
Query: 356 VAERALDLPLYSKYRDDPYLKITSSK 381
A++ L+LP + K ++D + +++ SK
Sbjct: 125 EAKKRLELPEHLKIKEDNFFQVSKSK 150
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN). Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A II++ LP +
Sbjct: 11 LIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMS 70
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E V E + + +PGA +LI HL HG+P ALA++S A+ + K S +
Sbjct: 71 KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEF 130
Query: 132 NESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGME 187
FS +++G D EV+ GKP PDIFL AKR + P+ LV ED+ GV A AAGM+
Sbjct: 131 FSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQ 190
Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
VV VP T A V+NSL D +PE +GLP ++
Sbjct: 191 VVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|O74866|RIFK_SCHPO Riboflavin kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmn1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P G VV G GRGSK LGIPTAN+S + ++L SGVYFG+A + R V+ MVMS
Sbjct: 23 PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
+GWNPY+ N ++ E L+ EDFY+E + ++++GYIRPE N+ L+ LI IH D +
Sbjct: 82 VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141
Query: 356 VAERALDLPLYSKYRDDPYLKI 377
VA ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P + GG +V+G GRGSK LGIPTAN E + P+G Y+GWA + V+KMV+S
Sbjct: 6 PLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLS 65
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNP+++N EK++E +LH+F+ D Y + L + IVGY+RPE +F SLE+LIA I D +
Sbjct: 66 IGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIRGDIE 125
Query: 356 VAERALDLPLYSKYRDDPYL--KITSSK 381
A+ LD +K ++ P+ K+ SSK
Sbjct: 126 QAKAFLDEADKAKLKEAPFFTEKLCSSK 153
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN). Drosophila melanogaster (taxid: 7227) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I DLDG +LNT+ ++++V + +YGK+++ K ++GK LE A IVE LP +
Sbjct: 16 LIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPIS 75
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E + E L +PGA LI HL H +P ALA++S T ++K S G+
Sbjct: 76 KEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGF 135
Query: 132 NESF-SVIVGSD-EVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGME 187
F +++G D EV+ GKP DIFL AKR + +P LV EDS GV A GM+
Sbjct: 136 FGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQ 195
Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
VV VP A V++SL D +PE +GLP F +
Sbjct: 196 VVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2 | Back alignment and function description |
|---|
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 12/230 (5%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
L+K+ CV D+DG LL+T+ +++ + L YGK + K +++G A +VE
Sbjct: 6 LRKVTHCV-FDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
Y LP + E+ + + + + +PGA RL++HL + VP LA++S +E K
Sbjct: 65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
+ QH E FS+ + GS EV GKP+PDIFL AA R + +PS LV EDS
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GV A +AGM+VV VP + + A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|Q75DY2|RIFK_ASHGO Riboflavin kinase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FMN1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 29/159 (18%)
Query: 243 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL------------------ 284
+V G GRGS LGIPTAN+ E ++E +GVYFGWA L
Sbjct: 27 IVAGFGRGSAELGIPTANVPIEQLPSEVNEMATGVYFGWARLRPNMDQEAQVHHRNDGSE 86
Query: 285 -----------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 333
+ RGV+ +V+S+GWNP+++N++KT+E +L++F+EDFY ++ +GY
Sbjct: 87 VIYNFGSKLSETERGVFPIVLSVGWNPFYNNSKKTVELHILNDFEEDFYGAKIKFSFLGY 146
Query: 334 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 372
IRPE N+ + E LI IH D K+A L YS ++
Sbjct: 147 IRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQ 185
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme. Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|A4QQ05|RIFK_MAGO7 Riboflavin kinase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=FMN1 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 16/143 (11%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEG-YSDVLSEHPSGVYFGWAGLSTRG------ 288
P+ + G V+ G GRGSK LGIPTANL + S +S SGVY+GWA L
Sbjct: 20 PYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESP 79
Query: 289 ---------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEAN 339
V+ MVMSIG+NP+++N E++ E +LH+F DFYD + L+I+G+IR E N
Sbjct: 80 SSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKN 139
Query: 340 FPSLETLIAKIHEDRKVAERALD 362
+ SLE L+ I+ D VA +LD
Sbjct: 140 YDSLEALVKDINTDCDVARTSLD 162
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme. Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|A5DAH9|RIFK_PICGU Riboflavin kinase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=FMN1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 31/159 (19%)
Query: 240 GGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG----------- 288
G + G GRGS LGIPTAN+ + L++ +G+Y+GW L R
Sbjct: 22 AGTIESGFGRGSAELGIPTANIPV---TSELNKLETGIYYGWCRLVPRNQECAAKQRSDG 78
Query: 289 -----------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIV 331
+ M MSIGWNP+++N KT E ++H+F E+FY +L ++
Sbjct: 79 KKVYFNNGTKLADDELETFPMAMSIGWNPFYNNETKTAEVHIIHKFRENFYGADLRYAVM 138
Query: 332 GYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYR 370
G+IRPE N+ + E LIA I++D ++ + AL P Y KYR
Sbjct: 139 GHIRPELNYTTKEALIADINKDIEITKDALSKPSYEKYR 177
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Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme. Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | ||||||
| 255567401 | 382 | riboflavin kinase/fmn adenylyltransferas | 0.989 | 0.992 | 0.796 | 1e-179 | |
| 359495472 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.981 | 0.969 | 0.779 | 1e-174 | |
| 359495493 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.981 | 0.969 | 0.773 | 1e-173 | |
| 224066785 | 381 | predicted protein [Populus trichocarpa] | 0.986 | 0.992 | 0.775 | 1e-172 | |
| 224082356 | 382 | predicted protein [Populus trichocarpa] | 0.989 | 0.992 | 0.773 | 1e-172 | |
| 356521303 | 377 | PREDICTED: pseudouridine-5'-monophosphat | 0.968 | 0.984 | 0.770 | 1e-171 | |
| 297804002 | 380 | ATFMN [Arabidopsis lyrata subsp. lyrata] | 0.979 | 0.986 | 0.757 | 1e-170 | |
| 147846786 | 891 | hypothetical protein VITISV_023071 [Viti | 0.981 | 0.421 | 0.731 | 1e-169 | |
| 449457696 | 386 | PREDICTED: pseudouridine-5'-monophosphat | 0.981 | 0.974 | 0.747 | 1e-168 | |
| 42567011 | 379 | riboflavin kinase [Arabidopsis thaliana] | 0.979 | 0.989 | 0.749 | 1e-167 |
| >gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/379 (79%), Positives = 334/379 (88%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA PLKK +SCVILDLDGTLLNTDG+ S++LK FLVKYGK+WDGRE ++IVGKTP E AA
Sbjct: 3 MANPLKKFVSCVILDLDGTLLNTDGIVSDILKVFLVKYGKQWDGREGNRIVGKTPFEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF+ E+ MFSD CK+K LPGANRLIKH H VPMALASNS RA
Sbjct: 63 TIVEDYKLPCPTEEFIAEITPMFSDQWCKIKPLPGANRLIKHFIGHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFS+I+G DEV+ GKPSP+IFLEAA+RLN+EPSS LVIEDS+ GV+
Sbjct: 123 IEAKISCHEGWKESFSIIIGGDEVKAGKPSPEIFLEAARRLNIEPSSCLVIEDSLPGVMG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEVVAVPS+PKQ+H YTAADEVINSLLDL+PEKWGLP F+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFEDWVEGTLPVEPWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPVVKG GRGSKVLGIPTANLSTEGYS VLS+HPSGVYFGWA LSTRGVYKMVMSIGWNP
Sbjct: 243 GPVVKGFGRGSKVLGIPTANLSTEGYSAVLSQHPSGVYFGWAALSTRGVYKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLHEF+EDFY EEL LVIVGYIRPEANFPSLE+L+AKI EDRKVAE A
Sbjct: 303 YFNNVEKTIEPWLLHEFEEDFYGEELRLVIVGYIRPEANFPSLESLVAKIQEDRKVAEIA 362
Query: 361 LDLPLYSKYRDDPYLKITS 379
LDLPLYSK+RDDPYLK +S
Sbjct: 363 LDLPLYSKFRDDPYLKGSS 381
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/376 (77%), Positives = 333/376 (88%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL H VPMALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHRVPMALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE+WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQDWVEDTLPVEPWYIGG 243
Query: 242 PVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPY 301
PV+KG GRGSKVLG+PTANLSTEGYS +LSE SGVYFGWAGLS +GVYKMVMSIGWNPY
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303
Query: 302 FDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL 361
F+N EKTIEPWLLHEFDEDFY EELHLVIVGYIRPEANF SLE+LIAKIHEDR++AERAL
Sbjct: 304 FNNTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERAL 363
Query: 362 DLPLYSKYRDDPYLKI 377
DLPLYS ++DDPYLKI
Sbjct: 364 DLPLYSNFKDDPYLKI 379
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 291/376 (77%), Positives = 331/376 (88%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL HGVP+ALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IF EA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFFEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
KAAGMEVVAVPS+P Q+H + +ADEVINSLLDLRPE WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGG 243
Query: 242 PVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPY 301
PV+KG GRGSKVLG+PTANLSTEGYS +LSE SGVYFGWAGLS +GVYKMVMSIGWNPY
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303
Query: 302 FDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL 361
F+N EKTIEPWLLHEFDEDFY EELHLVIVGYIRPEANF SLE+LIAKIHEDR++AERAL
Sbjct: 304 FNNTEKTIEPWLLHEFDEDFYGEELHLVIVGYIRPEANFSSLESLIAKIHEDRRIAERAL 363
Query: 362 DLPLYSKYRDDPYLKI 377
DLPLYS ++DDPYLKI
Sbjct: 364 DLPLYSNFKDDPYLKI 379
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/379 (77%), Positives = 333/379 (87%), Gaps = 1/379 (0%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKKL+S VILDLDGTLL+TDG+ S+VLK F+VKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 IAKPLKKLVSAVILDLDGTLLHTDGIVSDVLKVFVVKYGKQWDGRETQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDY LPC+ +F+ ++ + D C +KALPGANRLIKHLS H VPMALASNS RA
Sbjct: 63 AVVEDYELPCSTDDFLTQITPLLYDQWCSIKALPGANRLIKHLSSHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW SFSVI+ DEVRTGKPSP+IFLEAAKRLN++PSS LVIEDS+ GV
Sbjct: 123 IESKISYHQGWKGSFSVIIAGDEVRTGKPSPEIFLEAAKRLNVKPSSCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEVVAVPS+PK +H YT ADEVINSLLDL+PE WGLPPF+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPK-SHLYTEADEVINSLLDLQPELWGLPPFEDWMEGTLPIEPWHIG 241
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLS++G+YKMVMSIGWNP
Sbjct: 242 GPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSSQGLYKMVMSIGWNP 301
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLHEFD DFY EEL LV+VGYIRPEANF SLE+LIAKIHEDR++AERA
Sbjct: 302 YFNNTEKTIEPWLLHEFDGDFYGEELRLVVVGYIRPEANFSSLESLIAKIHEDRRIAERA 361
Query: 361 LDLPLYSKYRDDPYLKITS 379
LD+P YSKYRDDPYLK +S
Sbjct: 362 LDIPTYSKYRDDPYLKGSS 380
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 293/379 (77%), Positives = 329/379 (86%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKK ++ VILDLDGTL++TDG+ +VLK L+KYGK+WDGRE KIVGKTPLEEAA
Sbjct: 3 IAKPLKKAVAAVILDLDGTLIHTDGILGDVLKALLLKYGKQWDGREAQKIVGKTPLEEAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I+V DY LPC+ EFV ++ + D C +KALPGANRLIKHLS H VP+ALASNS RA
Sbjct: 63 IVVGDYELPCSIDEFVTQITPLLYDQFCNIKALPGANRLIKHLSGHNVPLALASNSPRAY 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISYQ GW ESFSVI+ DEVR GKPSP+IFLEAAKRLN+EPS LVIEDS+ GV
Sbjct: 123 IESKISYQQGWKESFSVIIAGDEVRAGKPSPEIFLEAAKRLNIEPSRCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAA MEVVAVPS+PKQTH Y AADEVI+SLLDL+PE WGLPPF DWI+GTLP E W+IG
Sbjct: 183 GKAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDDWIDGTLPLEIWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP
Sbjct: 243 GPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLHEFD DFY EEL LVIVGYIRPEANF +LE+LIAKIHEDR++AERA
Sbjct: 303 YFNNTEKTIEPWLLHEFDGDFYGEELRLVIVGYIRPEANFTTLESLIAKIHEDRRIAERA 362
Query: 361 LDLPLYSKYRDDPYLKITS 379
LD+PLY KY+DDPYLK +S
Sbjct: 363 LDIPLYLKYKDDPYLKGSS 381
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/371 (77%), Positives = 322/371 (86%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KI+G TP E AA +V+D
Sbjct: 5 KKLIRCVILDLDGTLLNTDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQD 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
Y LPC+ EF++E+ +FSD C +KALPGANRL+KHL HGVPMALASNS R +IE+KI
Sbjct: 65 YQLPCSAIEFLSEISPLFSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
SY GW SFSVI+G DEVRTGKPSP+IFLEAA+RLNMEPSS LVIEDS+ GV AGK A
Sbjct: 125 SYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
MEVV VPSLPKQ+H YTAADEVINSLLDLR EKWGLPPF+DW+EGTLP +PWYIGGPVVK
Sbjct: 185 MEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVK 244
Query: 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA 305
G GRGSKVLGIPTANLSTEGYSD+LSE+P+GVYFGWAGLS RGV+KMVMSIGWNPYF+N
Sbjct: 245 GFGRGSKVLGIPTANLSTEGYSDLLSEYPAGVYFGWAGLSARGVFKMVMSIGWNPYFNNK 304
Query: 306 EKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPL 365
EK IEPWLLH+F+EDFY EEL LVIVGYIRPE NF SLE+L+AKIHEDR+VAERALDLPL
Sbjct: 305 EKAIEPWLLHDFNEDFYGEELRLVIVGYIRPEVNFSSLESLVAKIHEDRRVAERALDLPL 364
Query: 366 YSKYRDDPYLK 376
YS +++D YL+
Sbjct: 365 YSSFKNDSYLR 375
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 325/375 (86%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVG+TPLE A
Sbjct: 3 MSNSLKKLTSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGQTPLEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDYGLPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYGLPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKIS+ GW E FSVIVGSDEV GKPSPDIFLEAAKRLN +P+ LVIEDSV GV+A
Sbjct: 123 IESKISHHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLNKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG V+AVPSLPKQTH YT+ADEVINSLLD+RPEKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAKIHEDR+VAE+A
Sbjct: 303 YFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKA 362
Query: 361 LDLPLYSKYRDDPYL 375
LDLP Y+K++DDPYL
Sbjct: 363 LDLPSYAKFKDDPYL 377
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/399 (73%), Positives = 332/399 (83%), Gaps = 23/399 (5%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 484 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 543
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL HGVP+ALASNS RA+I
Sbjct: 544 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 603
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 604 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 663
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDW-------------- 227
KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE WGLP FQD
Sbjct: 664 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEXWGLPSFQDCKPLRYFLSYSQTFP 723
Query: 228 -IEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST 286
+E TLP EPWYIGGPV+KG GRGSKVLG+PTANLSTEGYS +LSE SGVYFGWAGLS
Sbjct: 724 RVEDTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSK 783
Query: 287 RGVYKMVMSIGWNPYFDNAEKTI--------EPWLLHEFDEDFYDEELHLVIVGYIRPEA 338
+GVYKMVMSIGWNPYF+N EKTI EPWLLHEFDEDFY EELHLVIVGYIRPEA
Sbjct: 784 QGVYKMVMSIGWNPYFNNTEKTIVSATWTVKEPWLLHEFDEDFYGEELHLVIVGYIRPEA 843
Query: 339 NFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 377
NF SLE+LIAKIHEDR++AERALDLPLYS ++DDPYLKI
Sbjct: 844 NFSSLESLIAKIHEDRRIAERALDLPLYSNFKDDPYLKI 882
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457696|ref|XP_004146584.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] gi|449488415|ref|XP_004158027.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/376 (74%), Positives = 330/376 (87%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
++ PLK ++S VILDLDGTLL+TDG+ ++VLK+FL KYGK+WDGRE ++ GKTP E AA
Sbjct: 7 ISNPLKMVVSGVILDLDGTLLHTDGIVNDVLKSFLGKYGKQWDGREALRVTGKTPYESAA 66
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+IVEDYGLPC+ E ++++ +F++ C +KALPGANRLIKH S H VP+ALASNS R
Sbjct: 67 VIVEDYGLPCSSAELMSQISPLFAERWCNIKALPGANRLIKHFSNHRVPIALASNSSREN 126
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKIS+ GW +SFSVI+GS+EV KPSP+IFLE+AKRLN+EPSS LVIEDSV GV A
Sbjct: 127 IESKISFHPGWKDSFSVIIGSNEVTAAKPSPEIFLESAKRLNLEPSSCLVIEDSVPGVAA 186
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGM+VVAVPSLPK++H Y++ADEVINSLLD +P+KWGLPPF+DW+E TLP P YIG
Sbjct: 187 GKAAGMKVVAVPSLPKKSHLYSSADEVINSLLDFQPQKWGLPPFEDWVENTLPINPLYIG 246
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPVVKG GRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG++KMVMSIGWNP
Sbjct: 247 GPVVKGYGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGIFKMVMSIGWNP 306
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
+FDN EKTIEPWLLH+FD DFY E+L LV+VGYIRPEANFPSLE+LIAKIHED ++AERA
Sbjct: 307 FFDNVEKTIEPWLLHDFDGDFYGEDLRLVVVGYIRPEANFPSLESLIAKIHEDGRIAERA 366
Query: 361 LDLPLYSKYRDDPYLK 376
LDLPLYSKYR+D YLK
Sbjct: 367 LDLPLYSKYRNDQYLK 382
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42567011|ref|NP_193878.2| riboflavin kinase [Arabidopsis thaliana] gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana] gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana] gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana] gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/375 (74%), Positives = 322/375 (85%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAKIHEDR+VAE+A
Sbjct: 303 YFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKA 362
Query: 361 LDLPLYSKYRDDPYL 375
LDLP Y+K++ DPYL
Sbjct: 363 LDLPSYAKFKGDPYL 377
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | ||||||
| TAIR|locus:2119647 | 379 | FMN/FHY "riboflavin kinase/FMN | 0.979 | 0.989 | 0.722 | 7.9e-149 | |
| UNIPROTKB|F1SJ99 | 162 | RFK "Uncharacterized protein" | 0.396 | 0.938 | 0.460 | 5.7e-36 | |
| RGD|1549748 | 155 | Rfk "riboflavin kinase" [Rattu | 0.386 | 0.954 | 0.479 | 7.2e-36 | |
| RGD|1563242 | 155 | RGD1563242 "similar to ribofla | 0.386 | 0.954 | 0.479 | 7.2e-36 | |
| UNIPROTKB|Q3SZP4 | 234 | RFK "Uncharacterized protein" | 0.433 | 0.709 | 0.433 | 1.2e-35 | |
| UNIPROTKB|J9NSA8 | 384 | RFK "Uncharacterized protein" | 0.396 | 0.395 | 0.453 | 1.2e-35 | |
| MGI|MGI:1914688 | 155 | Rfk "riboflavin kinase" [Mus m | 0.386 | 0.954 | 0.472 | 1.5e-35 | |
| UNIPROTKB|F1NU60 | 168 | LOC427259 "Uncharacterized pro | 0.402 | 0.916 | 0.467 | 1.9e-35 | |
| UNIPROTKB|J9P4I1 | 206 | RFK "Uncharacterized protein" | 0.381 | 0.708 | 0.465 | 1.9e-35 | |
| UNIPROTKB|Q969G6 | 155 | RFK "Riboflavin kinase" [Homo | 0.381 | 0.941 | 0.465 | 4e-35 |
| TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 271/375 (72%), Positives = 310/375 (82%)
Query: 1 MAQPLKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV+ + ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLH+F EDFY EEL L+IVGYIRPEANF SLE+LIAKIHEDR+VAE+A
Sbjct: 303 YFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGYIRPEANFSSLESLIAKIHEDREVAEKA 362
Query: 361 LDLPLYSKYRDDPYL 375
LDLP Y+K++ DPYL
Sbjct: 363 LDLPSYAKFKGDPYL 377
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| UNIPROTKB|F1SJ99 RFK "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 70/152 (46%), Positives = 108/152 (71%)
Query: 230 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 289
G + + P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V
Sbjct: 6 GVMRNLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 65
Query: 290 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 349
+KMV+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+
Sbjct: 66 HKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 125
Query: 350 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 381
I D + A++ LDLP + K ++D + +++ SK
Sbjct: 126 IQGDIEEAKKQLDLPEHLKLKEDNFFQVSKSK 157
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| RGD|1549748 Rfk "riboflavin kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 71/148 (47%), Positives = 106/148 (71%)
Query: 234 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 293
S P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV
Sbjct: 3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62
Query: 294 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 353
+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D
Sbjct: 63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122
Query: 354 RKVAERALDLPLYSKYRDDPYLKITSSK 381
+ A++ LDLP + K +DD + +++ SK
Sbjct: 123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150
|
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| RGD|1563242 RGD1563242 "similar to riboflavin kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 71/148 (47%), Positives = 106/148 (71%)
Query: 234 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 293
S P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV
Sbjct: 3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGEVHKMV 62
Query: 294 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 353
+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D
Sbjct: 63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122
Query: 354 RKVAERALDLPLYSKYRDDPYLKITSSK 381
+ A++ LDLP + K +DD + +++ SK
Sbjct: 123 IEEAKKQLDLPEHLKLKDDNFFQVSKSK 150
|
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| UNIPROTKB|Q3SZP4 RFK "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 72/166 (43%), Positives = 108/166 (65%)
Query: 216 PEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS 275
P+ P + +G + P++ G VV+G GRGSK LGIPTAN + ++ ++ +
Sbjct: 64 PDSRSGPQPEPEADGVMRQLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADIST 123
Query: 276 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIR 335
G+Y+GWA + V+KMV+SIGWNPY+ N +K++E ++H F EDFY E L + IVGY+R
Sbjct: 124 GIYYGWASVGNGDVHKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILKVAIVGYLR 183
Query: 336 PEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 381
PE NF SLE LI+ I D + A++ LDLP + K ++D + ++ SK
Sbjct: 184 PEKNFDSLEALISAIQGDIEEAKKRLDLPEHLKLKEDKFFQVPKSK 229
|
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| UNIPROTKB|J9NSA8 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 69/152 (45%), Positives = 107/152 (70%)
Query: 230 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV 289
G + P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V
Sbjct: 228 GVMRHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDV 287
Query: 290 YKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 349
+KMV+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+
Sbjct: 288 HKMVVSIGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA 347
Query: 350 IHEDRKVAERALDLPLYSKYRDDPYLKITSSK 381
I D + A++ LDLP + K+++D + ++ +K
Sbjct: 348 IQGDIEEAKKRLDLPEHLKFKEDNFFQVPKNK 379
|
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| MGI|MGI:1914688 Rfk "riboflavin kinase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 70/148 (47%), Positives = 105/148 (70%)
Query: 234 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMV 293
S P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV
Sbjct: 3 SLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMV 62
Query: 294 MSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 353
+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D
Sbjct: 63 VSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGD 122
Query: 354 RKVAERALDLPLYSKYRDDPYLKITSSK 381
+ A++ LDLP + K +DD + +++ K
Sbjct: 123 IEEAKKQLDLPEHLKLKDDNFFQVSKGK 150
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| UNIPROTKB|F1NU60 LOC427259 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 72/154 (46%), Positives = 102/154 (66%)
Query: 219 WGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVY 278
W LP + + P++ G VVKG GRGS+ LG+PTAN S + S+ P+G+Y
Sbjct: 3 WTLPAMRGRCAAAVRYLPYFCRGEVVKGFGRGSRELGVPTANFSEQVVESFPSDIPTGIY 62
Query: 279 FGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEA 338
+GWA + V+KMV+SIGWNP++ N +K++E +++ F EDFY E L +VI GYIR E
Sbjct: 63 YGWASVGNGDVHKMVLSIGWNPFYKNIKKSVETHIINTFKEDFYGEILSIVITGYIRSEK 122
Query: 339 NFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 372
NF SLETL++ I ED + A+R LDLP + K +D+
Sbjct: 123 NFNSLETLVSAIREDIEEAKRQLDLPEHLKLKDN 156
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| UNIPROTKB|J9P4I1 RFK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 68/146 (46%), Positives = 105/146 (71%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 57 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHKMVVS 116
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 117 IGWNPYYKNTKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 176
Query: 356 VAERALDLPLYSKYRDDPYLKITSSK 381
A++ LDLP + K+++D + ++ +K
Sbjct: 177 EAKKRLDLPEHLKFKEDNFFQVPKNK 202
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| UNIPROTKB|Q969G6 RFK "Riboflavin kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 68/146 (46%), Positives = 105/146 (71%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 65 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124
Query: 356 VAERALDLPLYSKYRDDPYLKITSSK 381
A++ L+LP + K ++D + +++ SK
Sbjct: 125 EAKKRLELPEHLKIKEDNFFQVSKSK 150
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.7 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.7.1.26 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pm.C_LG_II000354 | riboflavin kinase (EC-2.7.1.26) (381 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.142.26.1 | SubName- Full=Putative uncharacterized protein; (231 aa) | • | 0.899 | |||||||
 | gw1.120.130.1 | riboflavin synthase (EC-2.5.1.9) (205 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 383 | |||
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 0.0 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 5e-57 | |
| pfam01687 | 125 | pfam01687, Flavokinase, Riboflavin kinase | 2e-40 | |
| smart00904 | 124 | smart00904, Flavokinase, Riboflavin kinase | 9e-39 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 9e-39 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 1e-28 | |
| COG0196 | 304 | COG0196, RibF, FAD synthase [Coenzyme metabolism] | 2e-27 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 2e-25 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 1e-24 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 1e-23 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 2e-23 | |
| PRK05627 | 305 | PRK05627, PRK05627, bifunctional riboflavin kinase | 1e-20 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 3e-18 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 7e-18 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 7e-18 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 2e-16 | |
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 2e-16 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 2e-15 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 3e-15 | |
| TIGR00083 | 288 | TIGR00083, ribF, riboflavin kinase/FMN adenylyltra | 1e-14 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 1e-14 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 3e-14 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 1e-13 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 8e-13 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 1e-12 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 6e-12 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 2e-11 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 3e-11 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 1e-10 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 2e-10 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 5e-10 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 9e-10 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 3e-09 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 5e-09 | |
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 2e-07 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 7e-07 | |
| TIGR00213 | 176 | TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate | 1e-05 | |
| TIGR01656 | 147 | TIGR01656, Histidinol-ppas, histidinol-phosphate p | 5e-05 | |
| TIGR01422 | 253 | TIGR01422, phosphonatase, phosphonoacetaldehyde hy | 1e-04 | |
| COG0241 | 181 | COG0241, HisB, Histidinol phosphatase and related | 3e-04 | |
| TIGR01458 | 257 | TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam | 6e-04 | |
| PRK13225 | 273 | PRK13225, PRK13225, phosphoglycolate phosphatase; | 7e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 0.001 | |
| PRK08942 | 181 | PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p | 0.001 | |
| PRK13478 | 267 | PRK13478, PRK13478, phosphonoacetaldehyde hydrolas | 0.003 | |
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 0.004 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 716 bits (1850), Expect = 0.0
Identities = 304/376 (80%), Positives = 336/376 (89%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
A+PLKKL+S VILDLDGTLLNTDG+ S+VLK FLVKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 AAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDYGLPC+ EF +E+ + S+ C +KALPGANRLIKHL HGVPMALASNS RA
Sbjct: 63 TVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFSVIVG DEV GKPSPDIFLEAAKRLN+EPS+ LVIEDS+ GV+A
Sbjct: 123 IEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEV+AVPS+PKQTH Y++ADEVINSLLDL+PEKWGLPPF DWIEGTLP EPW+IG
Sbjct: 183 GKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIG 242
Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
GPV+KG GRGSKVLGIPTANLSTE YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 302
Query: 301 YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360
YF+N EKTIEPWLLH+F EDFY EEL LVIVGYIRPEANFPSLE+LIAKIHEDR++AE+A
Sbjct: 303 YFNNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIAKIHEDRRIAEKA 362
Query: 361 LDLPLYSKYRDDPYLK 376
LDLPLY+KY+DDPYL
Sbjct: 363 LDLPLYAKYKDDPYLT 378
|
Length = 382 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 5e-57
Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 17/223 (7%)
Query: 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKH 73
+DG LL+T+ ++EV + L +YGK +D K K++GK +E A I VE+ GL +
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPE 60
Query: 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133
+F+ E +M D +PGA RL++HL G+P+A+A+ SH+ + K +HG E
Sbjct: 61 DFLVEREAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQ-RHG--E 117
Query: 134 SFS----VIVGSD-EVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG 185
FS V+ G D EV+ GKP+PDIFL AA+R ++P LV ED+ GV A K AG
Sbjct: 118 LFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAG 177
Query: 186 MEVVAVP--SLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
M VV VP L K + AD+V++SLLD +PE+WGLPPF D
Sbjct: 178 MSVVMVPDPRLDKSYCK--GADQVLSSLLDFKPEEWGLPPFPD 218
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Length = 220 |
| >gnl|CDD|190069 pfam01687, Flavokinase, Riboflavin kinase | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 2e-40
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P+ I G VV G GRG LG PTANLS + +GVY + + VY V +
Sbjct: 5 PYSISGTVVHGKGRGRT-LGFPTANLSLPKDKLL---PKNGVYAVRVKIDGK-VYPGVAN 59
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IG+NP F + TIE +L +FD D Y EE+ + + ++RPE F SLE L A+I +D +
Sbjct: 60 IGYNPTFGGKKPTIEVHIL-DFDGDLYGEEIRVEFLKFLRPEKKFDSLEELKAQIKKDIE 118
Query: 356 VAERAL 361
A + L
Sbjct: 119 QARKIL 124
|
This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthetase) activities. RibC plays an essential role in the flavin metabolism. This domain is thought to have kinase activity. Length = 125 |
| >gnl|CDD|214901 smart00904, Flavokinase, Riboflavin kinase | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 9e-39
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P+ I G VV G RG LG PTANL + + +GVY + +Y V +
Sbjct: 5 PYSISGRVVHGDKRGRT-LGFPTANLPLDDRLLLP---KNGVYAVRVRV-DGKIYPGVAN 59
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IG P F ++++E +L F D Y EE+ + + +IR E F SL+ L A+I D +
Sbjct: 60 IGTRPTFGG-DRSVEVHILD-FSGDLYGEEIEVEFLKFIRDEQKFDSLDELKAQISRDIE 117
Query: 356 VAERALD 362
A L
Sbjct: 118 EAREYLA 124
|
Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase, which converts it into FMN, and FAD synthetase, which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme. the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases. This entry represents riboflavin kinase, which occurs as part of a bifunctional enzyme or a stand-alone enzyme. Length = 124 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 9e-39
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDY-GLP 69
VI D+DGTL++++ + + L +YG E E ++ G ++ + G
Sbjct: 4 AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63
Query: 70 CAKHEFV-NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
A + +Y + L +K +PG L++ L G+P+A+AS+S R E ++ +
Sbjct: 64 PADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLAR 122
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIV +D+V GKP+PDI+L AA+RL ++P +V+EDS G+ A KAAGM V
Sbjct: 123 LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRPE 217
V VP+ + H +++L E
Sbjct: 183 VGVPAGHDRPHLDPLDAHGADTVLLDLAE 211
|
Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-28
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI D+DG + +T + ++ K KYG +D + + G + + I++ G +
Sbjct: 4 VIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGDGLS 63
Query: 72 ---KH---EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
H E NE+Y L V LPG L+K L G+ + L S+S A I +K
Sbjct: 64 LEEIHQLAERKNELYRE-LLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRILAK 122
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ G + F IV + EV+ GKP P+ FL AA+ L + P+ +V ED++ GV A +AA
Sbjct: 123 L----GLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAA 178
Query: 185 GMEVVAV 191
GM VAV
Sbjct: 179 GMFAVAV 185
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|223274 COG0196, RibF, FAD synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-27
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P+ I G VV G G LG PTAN+ + GVY L GVY V +
Sbjct: 185 PYSIEGKVVHGQKLGRT-LGFPTANIYLKDNVLP----AFGVYAVRVKL-DGGVYPGVAN 238
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
+G+ P D +E+++E +L F+ D Y E + + + +IR E F SL+ L +I +D
Sbjct: 239 VGYRPTVDGSERSLEVHILD-FNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKD-- 295
Query: 356 VAERALDL 363
ERA L
Sbjct: 296 -IERARKL 302
|
Length = 304 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + G +D + G + E I++ G +
Sbjct: 2 VIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGGKKYS 61
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
+ E N+ Y L LPG L+ L + + +ALAS S A TI K
Sbjct: 62 EEEKEELAERKNDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTILEK 121
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F IV E++ GKP P+IFL AA+ L + PS + IED+ G+ A KAA
Sbjct: 122 L----ELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAA 177
Query: 185 GMEVVAV 191
GM V V
Sbjct: 178 GMFAVGV 184
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-24
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
++ DLDGTL+++ L + G E+ + + L+E + A
Sbjct: 7 ILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEA 66
Query: 72 KHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E V + F L + + PG L+ L G + + +N ++ +
Sbjct: 67 AAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKA 125
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIVG D+V KP P+ L ++L ++P +L++ DS+ ++A KAAG+
Sbjct: 126 LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPA 185
Query: 189 VAV------PSLPKQTHRYTAADEVINSLLDLRP 216
V V Q AD VI+SL +L
Sbjct: 186 VGVTWGYNSREELAQAG----ADVVIDSLAELLA 215
|
Length = 220 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-23
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG L++T + + + + E + YG
Sbjct: 1 AVLFDLDGVLVDT----AHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTM 56
Query: 71 AKHEFVNEVYSMFSDHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ + +F + L K +K LPG L++ L G +AL +NS RA + +
Sbjct: 57 SAEDAQLLYKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE-- 114
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F V++ S +V GKP PDI+L+A K+L ++PS L ++DS G+ A KAAGM
Sbjct: 115 LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHT 174
Query: 189 VAV 191
V V
Sbjct: 175 VLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 2e-23
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+I DLDGTL++ D + E L+ + G + E + G E A ++ ++ +
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 71 A-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
E + E P L++ L GV + + SN R +E +
Sbjct: 61 DEILEALLEYNLESRLEP-----FPDVVELLRRLKAKGVKLVILSNGSREAVERLLEK-L 114
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
G + F + SD+V KP P+ + +RL + P L I+DS + A +AAG++ V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
Query: 190 AV 191
V
Sbjct: 175 HV 176
|
Length = 176 |
| >gnl|CDD|235536 PRK05627, PRK05627, bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed | Back alignment and domain information |
|---|
Score = 91.0 bits (227), Expect = 1e-20
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 239 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVMSIG 297
I G VV G G LG PTANL P GVY + + Y V +IG
Sbjct: 188 ISGRVVHGQKLGRT-LGFPTANLPLPDRV-----LPADGVYAVRVKVDGK-PYPGVANIG 240
Query: 298 WNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 357
P D + +E LL +F+ D Y E + + + +R E F SL+ L A+I +D + A
Sbjct: 241 TRPTVDGGRQLLEVHLL-DFNGDLYGEHITVEFLKKLRDEQKFDSLDELKAQIAKDIETA 299
Query: 358 ERAL 361
L
Sbjct: 300 RAFL 303
|
Length = 305 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 3e-18
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 13 ILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK 72
I D+DGT+L+T+ + + L +YG ++D + + G A I+E
Sbjct: 9 IFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDP 68
Query: 73 HEFVNE----VYSMFSDHLCKVKALPGANRLIKHL-SCHG-VPMALASNSHRATIESKIS 126
H E V SM D V+ LP LI+ + + HG PMA+ + S A E+ +
Sbjct: 69 HALAREKTEAVKSMLLD---SVEPLP----LIEVVKAWHGRRPMAVGTGSESAIAEALL- 120
Query: 127 YQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
H G F +V +D+V+ KP+PD FL A+ + ++P+ +V ED+ G+ A +AAG
Sbjct: 121 -AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAG 179
Query: 186 MEVVAVPSL 194
M+ V V L
Sbjct: 180 MDAVDVRLL 188
|
Length = 188 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 81.5 bits (201), Expect = 7e-18
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE---EAAIIVEDYGL 68
++ DLDGTLL+ D + + G E + LE +YGL
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 69 PCAK-----HEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + + + + L + P A +K L + + +N R
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELG-KKYKLGILTNGAR 125
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
E K+ Q G + F + S++V KP P+IF A ++L + P +L + DS+
Sbjct: 126 PHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLEND 184
Query: 179 VAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214
+ G +A GM+ V + K A D I+SL +L
Sbjct: 185 ILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222
|
Length = 229 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 7e-18
Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 24/194 (12%)
Query: 9 MSCVILDLDGTLLNTDG------MFSEVLKTFLVKY--------GKEWDGREKHKIVGKT 54
+ V+ DLDGTL + + E V KE +++ +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
E + V + + PGA +K L G+ +A+ +
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLIALTD---PLYPGAREALKELKEAGIKLAILT 117
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPSSSLVI 171
+R T + F +V +D GKP P IF A + L ++P L++
Sbjct: 118 GDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMV 173
Query: 172 EDSVIGVVAGKAAG 185
D V + A KAAG
Sbjct: 174 GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-16
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
LPG + G+ + LAS S +E + + F + ++++ KP P
Sbjct: 93 LLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHP 151
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVIN 209
+++L A +L ++P + + +EDS G++A KAA M + VP+ P+Q + R+ AD +
Sbjct: 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLE 210
Query: 210 SLLDLRPE 217
SL +L
Sbjct: 211 SLTELTAA 218
|
Length = 222 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 2e-16
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTG 147
+ PG RL+ G+ +A+ S S+ + ++ G + V G D+V
Sbjct: 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG-DDVPKK 201
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
KP PDI+ AA+ L ++PS +V+EDSVIG+ A KAAGM + S ++ AD V
Sbjct: 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAV 261
Query: 208 INSLLDLRPEKWGL 221
+ L D+ E + L
Sbjct: 262 FDCLGDVPLEDFDL 275
|
Length = 286 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-15
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 90 VKALPGANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGS 141
+ ALPGA L+ HL+ G+P A +AS H+A G V V +
Sbjct: 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GLPAP-EVFVTA 131
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
+ V+ GKP PD +L A+ L + P +V+ED+ GV++G AAG V+AV + P T R
Sbjct: 132 ERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPADTPRL 190
Query: 202 TAADEVINSLLDLRPEK 218
D V++SL L K
Sbjct: 191 DEVDLVLHSLEQLTVTK 207
|
Length = 218 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 3e-15
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 60/239 (25%)
Query: 12 VILDLDGTLLNT--------DGMFSEV---------LKTF-------LVKYGKEWDGREK 47
V DLDGTL+++ + + + ++T+ LV+ W GRE
Sbjct: 9 VAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGRE- 67
Query: 48 HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCH 106
+E L + F Y+ +++ L PG + L
Sbjct: 68 --------PDEEL-------LEKLRELFD-RHYA---ENVAGGSRLYPGVKETLAALKAA 108
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G P+A+ +N + + G + FSV++G D + KP P L A ++L ++P
Sbjct: 109 GYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167
Query: 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDLRPE 217
L + DS + A +AAG V V T+ Y D VI+ +L P
Sbjct: 168 EMLFVGDSRNDIQAARAAGCPSVGV------TYGYNYGEPIALSEPDVVIDHFAELLPL 220
|
Length = 226 |
| >gnl|CDD|232818 TIGR00083, ribF, riboflavin kinase/FMN adenylyltransferase | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 1e-14
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 235 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVM 294
P++I G V+ G G LG PTAN+ + L G Y L+ Y V
Sbjct: 167 RPYFICGTVIHGQKLGRT-LGFPTANIKLKNQVLPL---KGGYYVVVVLLNGE-PYPGVG 221
Query: 295 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 354
+IG P F + IE LL +F + Y +E+ + +V IRPE F SL+ L +I +D
Sbjct: 222 NIGNRPTFIGQQLVIEVHLL-DFSGELYGQEIKVTLVKKIRPEQKFSSLDELKNQIQQDI 280
Query: 355 KVAERAL 361
A++
Sbjct: 281 LQAKKWF 287
|
multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase) [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD]. Length = 288 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-14
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---- 144
+++ PG +K L G+ +ALA+N R + + + G ++ F ++ S+
Sbjct: 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYY 80
Query: 145 ------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
GKP+PD L A K L ++P L++ DS+ + KAAG VAV
Sbjct: 81 PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 3e-14
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
PGA LI G+ +A+AS++ R +++ ++ F IV +D KP+PDI
Sbjct: 164 PGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI 223
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
FL AAK L + S +VIED++ GV A +AAGM +AV
Sbjct: 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261
|
Length = 1057 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-13
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 32/192 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------IV 63
V+ DLDG L+++ F+ + + F + Y +E G G P EE I+
Sbjct: 1 VVFDLDGVLVDS---FAVMREAFAIAY-REVVGD------GPAPFEEYRRHLGRYFPDIM 50
Query: 64 EDYGLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH----R 118
GLP E FV E Y + +V+ PG L+ L GV A+A+ R
Sbjct: 51 RIMGLPLEMEEPFVRESYRLAG----EVEVFPGVPELLAELRADGVGTAIATGKSGPRAR 106
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +E+ G F ++GSDEV KP+PDI EA + L++ P ++++ D+V +
Sbjct: 107 SLLEAL-----GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDL 161
Query: 179 VAGKAAGMEVVA 190
+ +AAG VA
Sbjct: 162 ASARAAGTATVA 173
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 8e-13
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
PG + L G+ + L +N + G + FSV++G D + KP
Sbjct: 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPH 143
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
PD L AA+RL + P + + DS + + A +AAG V +
Sbjct: 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLL 184
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 1e-12
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 9 MSCVILDLDGTLLNTDGM----FSEVLKTFLVKYGKEWDGREK---HKIVGKTPLEEAAI 61
+ V+ D+DGTL ++D + F E+L+ G E+ I GK + A
Sbjct: 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPIT--EEFFVENIAGKHNEDIALG 79
Query: 62 IVED---YGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSH 117
+ D GL +F ++ ++F ++K L G +L K + G+ A +N+
Sbjct: 80 LFPDDLERGL-----KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAP 134
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E IS G ++ F ++ E KP PD +L+A + L + + V EDSV G
Sbjct: 135 RENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSG 193
Query: 178 VVAGKAAGMEVVAV 191
+ AG AAGM VV +
Sbjct: 194 IKAGVAAGMPVVGL 207
|
Length = 248 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 6e-12
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154
G+ + L + +PMAL S R T+E+ I G FSVIV +++V GKP P++F
Sbjct: 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMF 278
Query: 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ AA+ LN P +V +S V A A M+ VAV S + AAD V+ L +L
Sbjct: 279 IYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337
|
Length = 381 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 2e-11
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ PG+ ++ L H +P+A+AS R +E I G FSV++ +++V GKP
Sbjct: 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPD 167
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
P++F+ AA+RL P +V +S V A M+ VAV + +A D V+
Sbjct: 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRR 226
Query: 211 LLDL 214
L DL
Sbjct: 227 LDDL 230
|
Length = 260 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 3e-11
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 203
GKP+P + A +RL ++P ++I DS ++A +AAG+ + V T TA
Sbjct: 3 GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57
Query: 204 ------ADEVINSLLDL 214
D V++SL DL
Sbjct: 58 ERAPGRPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 47/225 (20%), Positives = 88/225 (39%), Gaps = 31/225 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKT---FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
+ DLD TL++T G+ + + L++ G D E ++ + K ++++YG
Sbjct: 5 IFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLK--------LIKEYGS 56
Query: 69 PCAKH---------------EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
H VY+ ++ PG + L G + +
Sbjct: 57 NYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGII 116
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
++ K+ + G + F ++ S+E KP P IF A KRL ++P ++++ D
Sbjct: 117 TDGLPVKQWEKLE-RLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGD 175
Query: 174 SVI-GVVAGKAAGMEVVAVPSLPKQTHR---YTAADEVINSLLDL 214
+ + K GM+ V + Y D I+SL +L
Sbjct: 176 RLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE-AAIIVEDYGLP 69
V D DGTL++++ + S T ++G E K L E II +++G+
Sbjct: 6 AVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVT 65
Query: 70 CAKHE----FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
AK E + EV +F L + + GAN L++ ++ VPM + SN SK+
Sbjct: 66 LAKAELEPVYRAEVARLFDSEL---EPIAGANALLESIT---VPMCVVSNGP----VSKM 115
Query: 126 SYQHGWNESFS-----VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+ G + G D ++ KP P + AA+ +N+ + ++++DS G +
Sbjct: 116 QHSLGKTGMLHYFPDKLFSGYD-IQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQS 174
Query: 181 GKAAGMEV 188
G AAGMEV
Sbjct: 175 GIAAGMEV 182
|
Length = 221 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 5e-10
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK---TPLEEA-AIIVEDYG 67
V+ DLDGTL+NT+ + ++ +FL + + K + V L + + I E
Sbjct: 6 VLFDLDGTLINTNEL---IISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESK- 61
Query: 68 LPCAKHEFVNEVYSMFSD-----HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
V E+ + + + H V +K L G + + + R T+E
Sbjct: 62 --------VEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVE 113
Query: 123 S--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
K++ G +E F V++ D+V KP P+ L+A + L +P +L++ D+ ++A
Sbjct: 114 MGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILA 170
Query: 181 GKAAGMEVVAV 191
GK AG + V
Sbjct: 171 GKNAGTKTAGV 181
|
Length = 214 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 9e-10
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK--TPLEEAAIIVEDYGLP 69
++ D+DGTL++ E+ + L+ + E+
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTF----------EEFGLNPAAFKRLKALRGLAEE---- 47
Query: 70 CAKHEFVNEVYSMFSDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
E H+ + +PGA L+ L G+ + + SN + +
Sbjct: 48 -LLWRIATEALEELQGHIGYDAEEAYIPGAADLLPRLKEAGIKLGIISNGSLRAQKLLLR 106
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
HG + F +I+GSDE+ + KP P+IFL A + L + P L + D++ + + AG
Sbjct: 107 K-HGLGDYFELILGSDEIGS-KPEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 3e-09
Identities = 66/242 (27%), Positives = 93/242 (38%), Gaps = 57/242 (23%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK------------------- 47
+L V+ DLDGTL+++ + + L++ G+ G E
Sbjct: 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAG 70
Query: 48 ---HKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL 103
H V E+A A+ +E Y HE VY PG +K L
Sbjct: 71 SIDHDGVDDELAEQALALFMEAYA---DSHEL-TVVY-------------PGVRDTLKWL 113
Query: 104 SCHGVPMALASNSHRATI-----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158
GV MAL +N + + KI W I+G D + KP P L
Sbjct: 114 KKQGVEMALITNKPERFVAPLLDQMKIGRYFRW------IIGGDTLPQKKPDPAALLFVM 167
Query: 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE----VINSLLDL 214
K + PS SL + DS V+A KAAG++ VA+ H A+E VI+ L L
Sbjct: 168 KMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY--GYNHGRPIAEESPALVIDDLRAL 225
Query: 215 RP 216
P
Sbjct: 226 LP 227
|
Length = 272 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 5e-09
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG---------KEWDGREKHKIV------GKT 54
S V+LD+ GT ++ DG+ L+ + G W G+ K + +
Sbjct: 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADGA 61
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
EA D+ E + D ALPGA + L G+ +AL +
Sbjct: 62 DEAEAQAAFADF----------EERLAEAYDDG-PPVALPGAEEAFRSLRSSGIKVALTT 110
Query: 115 NSHRATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVI 171
R T E ++ + GW + +V +V G+P+PD+ L A + ++ S V
Sbjct: 111 GFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVA 169
Query: 172 EDSVIGVVAGKAAGMEVVA 190
D+ + AG AG V
Sbjct: 170 GDTPNDLEAGINAGAGAVV 188
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKI 125
P + + E+YS F+ + P A +L+K L G+ + + SN R +E+
Sbjct: 84 PESFEKIFEELYSYFATPEP-WQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEAL- 141
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAA 184
G E F +V S EV KP P IF EA +R + P +L I DS+ +AA
Sbjct: 142 ----GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAA 197
Query: 185 GM 186
G
Sbjct: 198 GW 199
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 7e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
Q GW + +V++G D + KP P L AA+R+ + P+ + + D ++A +AAGM
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190
Query: 188 VVAV 191
VA
Sbjct: 191 SVAA 194
|
Length = 229 |
| >gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 1e-05
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 205
KP P + L+A K L+++ + S ++ D + + AG AA V+ P AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 166 WVLNSLADL 174
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176 |
| >gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193
KP P + LEA KRL ++ S SLV+ D + + A + AG+ V +
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146
|
This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147 |
| >gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNESFSVIVGSDEVRTGKPSP 151
PGA +I +L G+ + + R ++ + + G+ + V +D+V G+P+P
Sbjct: 102 PGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDY--NVTADDVPAGRPAP 159
Query: 152 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+ L+ A L + +++V + D+V + G+ AGM V V
Sbjct: 160 WMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200
|
This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253 |
| >gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 206
KP P + L A K N++ S S V+ D + + A + AG++ V+ + + T A
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164
Query: 207 VINSLLDL 214
V +SL +
Sbjct: 165 VFDSLAEF 172
|
Length = 181 |
| >gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 6e-04
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 205
GKPS FLEA + EP +++I D V G + GM + V +T +Y +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232
Query: 206 E 206
E
Sbjct: 233 E 233
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257 |
| >gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 7e-04
Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 30/201 (14%)
Query: 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------------KEWDGREKHKI 50
Q + + +I D DGTL+++ + +G ++W R +
Sbjct: 56 QSYPQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRR 115
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
G +P ++A ++ V D L ++ PG L+ L + +
Sbjct: 116 AGLSPWQQARLL--------------QRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCL 161
Query: 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+ S++ R IE+ + Q G FSV+ + + + + + R +P++ +
Sbjct: 162 GILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRA---LSQLVAREGWQPAAVMY 217
Query: 171 IEDSVIGVVAGKAAGMEVVAV 191
+ D V A + G+ VAV
Sbjct: 218 VGDETRDVEAARQVGLIAVAV 238
|
Length = 273 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 191
GKPSP I+ A ++L ++ S L++ D + ++ KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234
|
Length = 269 |
| >gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.001
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
KP P + L A+RLN++ + S ++ DS+ + A AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140
|
Length = 181 |
| >gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+V +D+V G+P P + L+ A L + ++ V ++D+V G+ G AGM V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202
|
Length = 267 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KPSP + +A + ++P ++ +DS + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| PLN02940 | 382 | riboflavin kinase | 100.0 | |
| TIGR00083 | 288 | ribF riboflavin kinase/FMN adenylyltransferase. mu | 100.0 | |
| PF01687 | 125 | Flavokinase: Riboflavin kinase; InterPro: IPR01586 | 100.0 | |
| PRK05627 | 305 | bifunctional riboflavin kinase/FMN adenylyltransfe | 100.0 | |
| COG0196 | 304 | RibF FAD synthase [Coenzyme metabolism] | 100.0 | |
| KOG3110 | 153 | consensus Riboflavin kinase [Coenzyme transport an | 100.0 | |
| PRK07143 | 279 | hypothetical protein; Provisional | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.96 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.96 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.96 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.96 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.95 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.94 | |
| PLN02811 | 220 | hydrolase | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.93 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.92 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.92 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.92 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.91 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.9 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.9 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.9 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.89 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.88 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.88 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.86 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.83 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.81 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.8 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.8 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.78 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.78 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.77 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.76 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.73 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.72 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.72 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.72 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.69 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.68 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.67 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.67 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.63 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.63 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.62 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.62 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.6 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.59 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.59 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.57 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.57 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.55 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.54 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.53 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.51 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.49 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.49 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.48 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.47 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.47 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.46 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.37 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.36 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.35 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.31 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.3 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.29 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.28 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.28 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.28 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.27 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.26 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.24 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.24 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.23 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.16 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.12 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.08 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.03 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.02 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.01 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.99 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.99 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.95 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.9 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.89 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.89 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.87 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.86 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.86 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.81 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.8 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.79 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.77 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.76 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.74 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.73 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.69 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.67 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.59 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.58 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.58 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.57 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.56 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.56 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.55 | |
| PLN02887 | 580 | hydrolase family protein | 98.55 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.53 | |
| cd02064 | 180 | FAD_synthetase_N FAD synthetase, N-terminal domain | 98.52 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.49 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.4 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.37 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.27 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.24 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.22 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.2 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.17 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.13 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.09 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.09 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.07 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.99 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.98 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.92 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.9 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.87 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.84 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.83 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.75 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.73 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.49 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.45 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.44 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.4 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 97.39 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.34 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.21 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.2 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.18 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.15 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.11 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.07 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.06 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.05 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.95 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.92 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.91 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.87 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.84 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.5 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.49 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.47 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.43 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.35 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 96.27 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.23 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 96.18 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.17 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.12 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.99 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.9 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 95.87 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 95.85 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 95.85 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.84 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.58 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.44 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.37 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.25 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.24 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.08 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.98 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 94.94 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.93 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 94.93 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 94.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 94.65 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 94.45 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 94.23 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 94.14 | |
| PLN02423 | 245 | phosphomannomutase | 93.9 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.01 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 92.6 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 92.2 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 91.65 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 91.38 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 91.05 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 90.78 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 89.99 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 88.66 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 88.64 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 88.44 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 88.16 | |
| PLN02423 | 245 | phosphomannomutase | 88.11 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 88.1 | |
| smart00764 | 182 | Citrate_ly_lig Citrate lyase ligase C-terminal dom | 87.24 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.86 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 86.52 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 86.51 | |
| PF06574 | 157 | FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof | 86.45 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 85.6 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 83.88 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 82.32 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 82.2 |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-79 Score=585.72 Aligned_cols=372 Identities=81% Similarity=1.332 Sum_probs=336.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
...+++|+||+||||+|+...+..++..+++++|..++.+......|.+..+.+..++..++.+...+++...+.+.+..
T Consensus 8 ~~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 8 KKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 34599999999999999999999999999999998888777788888888888888888888777777777777777776
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
......++||+.++|+.|+++|++++|+||++...+...+.+..++..+|+.+++++++..+||+|+++..+++++|++|
T Consensus 88 ~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p 167 (382)
T PLN02940 88 QWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP 167 (382)
T ss_pred HHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh
Confidence 66778899999999999999999999999999998888883378999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeee
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~ 245 (383)
++|++|||+.+|+++|+++|+.++++.++.........++.++.++.++....+.+|++++|+...||+|||+++|+|+|
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~ 247 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIK 247 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEe
Confidence 99999999999999999999999999886543333456788999999999888999999999999999999999999999
Q ss_pred cccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEec-cCCCccccCC
Q 016755 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLL-HEFDEDFYDE 324 (383)
Q Consensus 246 G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~-~~f~~~~yg~ 324 (383)
|+++||+.||||||||.+++..+++|.|+.|||++|+.++++.+|+||+|||+||||++++.++||||| | |++|+||+
T Consensus 248 G~~~G~~~lg~PTaNl~~~~~~~~~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i~~d-f~~dlyg~ 326 (382)
T PLN02940 248 GFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHD-FGEDFYGE 326 (382)
T ss_pred CCccCcccCCCCcccCCcchhhhhcCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEEeCC-CCCCCCCC
Confidence 999999548999999998765246665579999999999654689999999999999876778999999 7 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCcccc
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKIT 378 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (383)
+|+|.|++|||+|+||+|+|+|++||++|++.||++|+.|+|+.|+++.||..|
T Consensus 327 ~i~v~~~~~lR~e~kF~~~~~L~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PLN02940 327 ELRLVIVGYIRPEANFPSLESLIAKIHEDRRIAEKALDLPLYAKYKDDPYLTNS 380 (382)
T ss_pred eEEEEEehhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCchhhhhccChhhccC
Confidence 999999999999999999999999999999999999999999999999999544
|
|
| >TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=356.82 Aligned_cols=221 Identities=26% Similarity=0.346 Sum_probs=183.3
Q ss_pred HHHHHHHHHCCCCEEE--------EeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCCC
Q 016755 97 NRLIKHLSCHGVPMAL--------ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNMEP 165 (383)
Q Consensus 97 ~~lL~~L~~~G~~~~i--------~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~p 165 (383)
.+-++.+.+.|+...+ ...++++|++..+.+.++. +.+++|+|+.+|+. +.+.++..
T Consensus 57 ~~k~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~----~~ivvG~Df~FG~~~~G~~~~L~~~-------- 124 (288)
T TIGR00083 57 EDKARQLQIKGVEQLLVVVFDEEFANLSALQFIDQLIVKHLHV----KFLVVGDDFRFGHDRQGDFLLLQLF-------- 124 (288)
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHHHhccCC----cEEEECCCccCCCCCCCCHHHHHHh--------
Confidence 5566777777877544 3456788888877455665 89999999998865 44555444
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeee
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~ 245 (383)
++..|+.+..++....+ ... |++.+++.+.+++... |+++||+||+++|+|+|
T Consensus 125 ---------------~~~~g~~v~~~~~~~~~-~~I-SST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~Vv~ 177 (288)
T TIGR00083 125 ---------------GNTTIFCVIVKQLFCQD-IRI-SSSAIRQALKNGDLEL----------ANKLLGRPYFICGTVIH 177 (288)
T ss_pred ---------------ccccCcEEEEeccccCC-CeE-CHHHHHHHHHcCCHHH----------HHHhhhhhhccceEEEe
Confidence 44567777777775444 444 4467777777788775 99999999999999999
Q ss_pred cccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCCe
Q 016755 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEE 325 (383)
Q Consensus 246 G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~~ 325 (383)
|+++||+ ||||||||.+++. +++| +.|||++++.++ +.+|+||+|||.||||++.+.++|+|||| |++|+||++
T Consensus 178 G~~~Gr~-lGfPTaNl~~~~~-~~~p--~~GVYa~~v~i~-~~~y~~v~niG~~PT~~~~~~~~E~~ild-f~~dlYg~~ 251 (288)
T TIGR00083 178 GQKLGRT-LGFPTANIKLKNQ-VLPL--KGGYYVVVVLLN-GEPYPGVGNIGNRPTFIGQQLVIEVHLLD-FSGELYGQE 251 (288)
T ss_pred cCCCccc-ccCceEEecCccc-ccCC--CcceEEEEEEeC-CeEEEEEEEeCCCCccCCCceEEEEEeCC-CCcccCCCE
Confidence 9999996 9999999998875 5666 489999999984 58899999999999998766789999998 999999999
Q ss_pred EEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 326 LHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 326 ~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
++|+|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 252 i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~~ar~~~~ 288 (288)
T TIGR00083 252 IKVTLVKKIRPEQKFSSLDELKNQIQQDILQAKKWFN 288 (288)
T ss_pred EEEEeHHhccCCCCcCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
|
multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase). |
| >PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=311.87 Aligned_cols=125 Identities=40% Similarity=0.727 Sum_probs=110.1
Q ss_pred CCCCceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEE
Q 016755 232 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP 311 (383)
Q Consensus 232 llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~ 311 (383)
|||+||+++|+|+||+++||+ ||||||||.+++. .++|. .|||++|+.++ +++|+||+|||+||||++...+|||
T Consensus 1 LLG~py~i~G~Vv~G~~~Gr~-lGfPTANl~~~~~-~~~p~--~GVYa~~v~~~-~~~~~~v~niG~~PTf~~~~~~vE~ 75 (125)
T PF01687_consen 1 LLGRPYSISGTVVHGFGRGRK-LGFPTANLDIPDD-KLLPK--EGVYAVWVRVD-GKWYPGVTNIGYRPTFDGKERTVEV 75 (125)
T ss_dssp HHTSSEEEEEEEEC-SSCCCC-TTS-EEEEEEHCC-CTCCC--TEEEEEEEEET-SEEEEEEEEEEEETTTSSCEEEEEE
T ss_pred CcCCCEEEEEEEEeCCccccc-cCCccccccCCcc-ccccc--CEEEEEEEEEC-CEEEEeEEEecCCCccCcCceeEEE
Confidence 479999999999999999996 9999999999665 77784 79999999994 5899999999999999888899999
Q ss_pred EeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 312 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 312 ~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
|||| |++|+||++++|+|++|||+|+||+|+|+|++||++|++.||++|.
T Consensus 76 hild-f~~dlYg~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~a~~~lq 125 (125)
T PF01687_consen 76 HILD-FDGDLYGKKIKVEFLKFLRPEKKFDSLEELKEQIKKDIEQARKYLQ 125 (125)
T ss_dssp EETT-SSSE-TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH-
T ss_pred EEec-cCcccCCCeEEEEEEeCccCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 9998 9999999999999999999999999999999999999999999984
|
7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A .... |
| >PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-46 Score=343.10 Aligned_cols=222 Identities=29% Similarity=0.385 Sum_probs=182.7
Q ss_pred HHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~ 164 (383)
..+-++.+++.|+...++ ..++++|++.++.+.++. +.+++|+|+++|+. +.+.++..
T Consensus 72 ~eeR~~~l~~~gVD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~----~~iVvG~Df~FG~~~~G~~~~L~~~------- 140 (305)
T PRK05627 72 LRDKAELLAELGVDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNA----KHVVVGFDFRFGKKRAGDFELLKEA------- 140 (305)
T ss_pred HHHHHHHHHHcCCCEEEEecCCHHHhcCCHHHHHHHHHHhccCC----CEEEECCCCCCCCCCCCCHHHHHHH-------
Confidence 345566667777776654 336788888766455665 89999999998864 44445444
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
++..|+.++.++....+.... +++.+++.+.+++... |+++||+||+++|+|+
T Consensus 141 ----------------~~~~g~~v~~v~~~~~~~~~I-SST~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V~ 193 (305)
T PRK05627 141 ----------------GKEFGFEVTIVPEVKEDGERV-SSTAIRQALAEGDLEL----------ANKLLGRPYSISGRVV 193 (305)
T ss_pred ----------------HHHcCcEEEEeccEecCCCcC-chHHHHHHHHcCCHHH----------HHhhhcCCCceEEEEE
Confidence 455677777777754444444 4477777777787775 9999999999999999
Q ss_pred ecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCC
Q 016755 245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 324 (383)
Q Consensus 245 ~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~ 324 (383)
||+++||+ |||||||+.+++. .+ | +.|||++|+.++ +.+|+||+|||+||||++++.++|+|||| |++|+||+
T Consensus 194 ~G~~~Gr~-lgfPTaNl~~~~~-~~-p--~~GVY~~~~~i~-~~~y~~~~~iG~~ptf~~~~~~~E~~i~d-f~~d~Yg~ 266 (305)
T PRK05627 194 HGQKLGRT-LGFPTANLPLPDR-VL-P--ADGVYAVRVKVD-GKPYPGVANIGTRPTVDGGRQLLEVHLLD-FNGDLYGE 266 (305)
T ss_pred ECcccCcc-ccceeEeecCccC-CC-C--CceEEEEEEEEC-CEEEEEEEEecCCCccCCCceEEEEEecC-CCCccCCC
Confidence 99999996 9999999998775 44 6 489999999995 58999999999999998767789999998 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
+++|+|++|||+|+||+|++||++||++|++.||++|.
T Consensus 267 ~i~v~~~~~iR~e~kF~s~~~L~~~i~~D~~~a~~~~~ 304 (305)
T PRK05627 267 HITVEFLKKLRDEQKFDSLDELKAQIAKDIETARAFLA 304 (305)
T ss_pred EEEEEEhhhcCCCCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999985
|
|
| >COG0196 RibF FAD synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=334.53 Aligned_cols=220 Identities=30% Similarity=0.458 Sum_probs=182.7
Q ss_pred HHHHHHHHHHCCCCEE--------EEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChH---HHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD---IFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~--------i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~---~~~~~~~~lg~~ 164 (383)
..+-++.|...|+... +.+.++++|++..+ +.+.. +.+++|+|+.+||.... .++..
T Consensus 74 ~~~k~~~l~~~gvd~~~v~~F~~~fa~ls~~~Fv~~lv-~~l~~----k~ivvG~DF~FGk~~~g~~~~L~~~------- 141 (304)
T COG0196 74 LREKIRLLAGYGVDALVVLDFDLEFANLSAEEFVELLV-EKLNV----KHIVVGFDFRFGKGRQGNAELLREL------- 141 (304)
T ss_pred HHHHHHHHHhcCCcEEEEEeCCHhHhhCCHHHHHHHHH-hccCC----cEEEEecccccCCCCCCCHHHHHHh-------
Confidence 3455677777786554 34667888998444 66665 78999999999986432 22222
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
+++ |+.++.++....+.... +++.+++.+.+++... |+.+||+||+++|+|+
T Consensus 142 ----------------~~~-gf~v~~v~~~~~~~~~i-SSt~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv 193 (304)
T COG0196 142 ----------------GQK-GFEVTIVPKINEEGIRI-SSTAIRQALREGDLEE----------ANKLLGRPYSIEGKVV 193 (304)
T ss_pred ----------------ccC-CceEEEeccEecCCcEE-chHHHHHHHhcCCHHH----------HHHhcCCCeEEEEEEE
Confidence 445 88999998876655554 4477777777887775 9999999999999999
Q ss_pred ecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCC
Q 016755 245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 324 (383)
Q Consensus 245 ~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~ 324 (383)
||+++||+ ||||||||.++.. ++| +.|||++++.+.+ ..|+||+|||+||||++..+++|+|+|| |++|+||+
T Consensus 194 ~G~~~Gr~-lGfPTaNi~~~~~--~~~--~~GVYav~v~~~~-~~~~gv~~vG~rpt~~~~~~~lEvhi~D-f~~dlYG~ 266 (304)
T COG0196 194 HGQKLGRT-LGFPTANIYLKDN--VLP--AFGVYAVRVKLDG-GVYPGVANVGYRPTVDGSERSLEVHILD-FNGDLYGE 266 (304)
T ss_pred cccccccc-cCCCccccccccc--ccc--CCeeEEEEEEECC-ccccceEEecccccccCCeeEEEEEEec-ccccccCc
Confidence 99999995 9999999999884 445 4899999999965 4499999999999998878899999999 99999999
Q ss_pred eEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 016755 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 362 (383)
Q Consensus 325 ~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~ 362 (383)
.++|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 267 ~i~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~ 304 (304)
T COG0196 267 RVKVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA 304 (304)
T ss_pred eEEEEEhhhcccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999984
|
|
| >KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=261.37 Aligned_cols=149 Identities=54% Similarity=1.020 Sum_probs=136.1
Q ss_pred cCCCCCCceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcce
Q 016755 229 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT 308 (383)
Q Consensus 229 a~~llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~ 308 (383)
+..+.-.||.+.|.||+|.+||+++||+||||+..+....++-....|||.+|+.++.+.+|+.++||||||.+.++..+
T Consensus 5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt 84 (153)
T KOG3110|consen 5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT 84 (153)
T ss_pred cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence 44455679999999999999999999999999987554344444457999999999877899999999999999998999
Q ss_pred EEEEeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCccc
Q 016755 309 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 377 (383)
Q Consensus 309 ~e~~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ 377 (383)
+|+|++++|..|+||+++++.+++|||||++|+|+|+|++.|+.|++.|++.|+.|.+++|++++||++
T Consensus 85 ~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~~p~~~k~K~dpff~~ 153 (153)
T KOG3110|consen 85 MELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLDLPEYAKFKEDPFFTV 153 (153)
T ss_pred eeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhcCcchhhhccCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999953
|
|
| >PRK07143 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=267.42 Aligned_cols=198 Identities=17% Similarity=0.117 Sum_probs=153.5
Q ss_pred HHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 97 NRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 97 ~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.+-++.+++.|+...++ ..++++|++.++ . ++. +.+++|+|+.+|+....-...
T Consensus 68 ~er~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~ll-~-l~~----~~iVvG~Df~FG~~r~G~~~~------------ 129 (279)
T PRK07143 68 NSRLQTLANLGFKNIILLDFNEELQNLSGNDFIEKLT-K-NQV----SFFVVGKDFRFGKNASWNADD------------ 129 (279)
T ss_pred HHHHHHHHHCCCCEEEEeCCCHHHhCCCHHHHHHHHH-h-cCC----CEEEECCCcccCCCCCCCHHH------------
Confidence 45556677778766544 336788888765 4 444 789999999998754322222
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeeeccc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLG 248 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~G~~ 248 (383)
.++.+-.+..++....++... |++.|++.+.+++... |++||||||+++|+|+||
T Consensus 130 ------------L~~~~~~v~~v~~~~~~g~~I-SST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~G-- 184 (279)
T PRK07143 130 ------------LKEYFPNVHIVEILKINQQKI-STSLLKEFIEFGDIEL----------LNSLLLYNYSISITINKN-- 184 (279)
T ss_pred ------------HHHhCCcEEEeCCEEcCCcEE-cHHHHHHHHHcCCHHH----------HHHHcCCCcEEEEEEECC--
Confidence 111111444555543334444 4467777777787775 999999999999999998
Q ss_pred CCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCc--cccCCeE
Q 016755 249 RGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE--DFYDEEL 326 (383)
Q Consensus 249 ~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~--~~yg~~~ 326 (383)
||+.+++. +++| +.|||+|+|.+ ++.+|+||+|||.||| +|||||| |++ |+|| ++
T Consensus 185 ----------aNl~~~~~-~~~P--~~GVYa~~v~~-~~~~y~~v~niG~~PT-------iE~hild-f~~~~dlYg-~i 241 (279)
T PRK07143 185 ----------FEFTYPQN-IIKL--HAGIYLAYVVI-NNFKYHGILKINFNNK-------NKIKFFD-FDLIINKYQ-EI 241 (279)
T ss_pred ----------eEeCCCcC-cCCC--CCcEEEEEEEE-CCEEEEEEEEecCCce-------EEEEEec-CCCCcCCCC-EE
Confidence 89998775 6777 48999999998 4589999999999999 8999999 999 8999 99
Q ss_pred EEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCc
Q 016755 327 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLP 364 (383)
Q Consensus 327 ~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~ 364 (383)
+|+|++|||+|+||+| + +||++|++.||++|+..
T Consensus 242 ~v~f~~~iR~e~kF~s-~---~qi~~D~~~a~~~~~~~ 275 (279)
T PRK07143 242 FIEIVKEIRIISSNED-N---NILNDDIEIAKKFFLNN 275 (279)
T ss_pred EEEEhhccCCCcCCCc-H---HHHHHHHHHHHHHHHhh
Confidence 9999999999999999 5 89999999999999643
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=224.41 Aligned_cols=209 Identities=22% Similarity=0.381 Sum_probs=172.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGL-PCAKHEFVNEVYSMF 83 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 83 (383)
..++++|+||+||||+|+.+.+..++.+++.++|.+.+. .......|.........+....+. ......+...+.+.+
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARV 83 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 446999999999999999999999999999999987765 455667777766666555554443 223344445554444
Q ss_pred Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 84 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 84 ~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.+.. ....++||+.++|+.|+++|++++++||+....++..+ +.+++..+|+.+++++++..+||+|+.++.+++++|
T Consensus 84 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 162 (222)
T PRK10826 84 ISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLG 162 (222)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcC
Confidence 4433 45789999999999999999999999999999988888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc-ccccccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~~ 215 (383)
++|++|++|||+.+|+++|+++|+++++++...... .....++.++.++.++.
T Consensus 163 ~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 163 VDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 999999999999999999999999999998865432 22345688889988863
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=220.88 Aligned_cols=187 Identities=34% Similarity=0.519 Sum_probs=162.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 85 (383)
++++|||||||||+|+...+.++|.++++++|...+.+......|....+....+........ ..........+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999888888888777777776666654432 222333333333444
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
......+.||+.++|+.|+++|++++++|+++...++..+ ...|+.++|+.+++++++..+||+|+.|..+++++|++|
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 4567899999999999999999999999999999999888 889999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
++|++|+|+++++++|++|||.+++++...
T Consensus 160 ~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~ 189 (221)
T COG0637 160 EECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189 (221)
T ss_pred HHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence 999999999999999999999999999843
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=219.67 Aligned_cols=207 Identities=26% Similarity=0.415 Sum_probs=175.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|+||+||||+|+...+..+++.+++++|.+ ..........|.+....+............. +..+.+...+..
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 7888888999999988877665443332211 344445555544
Q ss_pred hhcc---CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 86 HLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 86 ~~~~---~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.... ..++||+.++|..|+++|++++++||.+...++..+ +.+|+.++|+.++++++....||+|..+..+++++|
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 4432 579999999999999999999999999999999999 889999999999998889999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc-c-ccccccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-T-HRYTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~-~-~~~~~a~~vi~~l~e~~ 215 (383)
++|++++||||+.+|+.+|++||+.++.|.++... . .....++.+++++.++.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~ 214 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELL 214 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHH
Confidence 99899999999999999999999999999998642 2 22456789999998854
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=224.06 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=163.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCC----CCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
.++++|+|||||||+|+...+..++.++++++|. +.+.+.+ ....|.+..+.+..++.. ... ...++...+..
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 97 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKEA 97 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHHH
Confidence 4689999999999999999999999999999864 3444433 355676666665544321 111 11122233344
Q ss_pred HHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 82 MFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 82 ~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.+.... ....++||+.++|+.|+++|++++|+||+....++..+ +++|+..+|+.+++++++..+||+|++|..++++
T Consensus 98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~ 176 (248)
T PLN02770 98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV 176 (248)
T ss_pred HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence 444433 35789999999999999999999999999999999989 8899999999999999999999999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-ccccchhhccccccC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
+|++|++|++|||+..|+++|+++|+.++++.++...... ...++.+++++.++.
T Consensus 177 ~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 177 LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 9999999999999999999999999999999886433222 236788888888743
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=219.84 Aligned_cols=203 Identities=23% Similarity=0.352 Sum_probs=165.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
|++++|+||+||||+|+...+..++.+++++++.. .+.+......|.+..+.+..+ . +...+.+...+...+..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 75 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKI----D-ESKVEEMITTYREFNHE 75 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhc----C-HHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999998764 566667777787766655432 1 11233333444443333
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.+++++++..+||+|+.+..++++++++
T Consensus 76 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 76 HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 22 35679999999999999999999999999999999888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+++|+++|+++|+.++++.++...... ...++.+++++.++.
T Consensus 155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~ 207 (214)
T PRK13288 155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLL 207 (214)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHH
Confidence 999999999999999999999999999887543222 235678888888754
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=224.68 Aligned_cols=205 Identities=23% Similarity=0.314 Sum_probs=161.5
Q ss_pred CCccEEEEecCCcccccH-HHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 83 (383)
..+|+|||||||||+|+. ..+..+|.++++++|..++.... ....|.+..+.+..++.. .... ....+...+...+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~ 100 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCW-SRDFLQMKRLAIRKEDLY 100 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence 368999999999999995 56778999999999988765544 567788887776665431 1111 1122333333333
Q ss_pred Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 84 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 84 ~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.... ....++||+.++|+.|+++|++++++||+....+...+ +++|+..+|+.+++++++..+||+|++|..+++++|
T Consensus 101 ~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 101 EYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred HHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence 2222 34678999999999999999999999999999999888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++|++|++|||+..|+++|+++|+.++++.. .........++.+++++.++
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g-~~~~~~l~~ad~vi~~~~el 230 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDL 230 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEec-CCchhhhccCCEEeCCHHHH
Confidence 9999999999999999999999999999974 32222223456677776664
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=218.59 Aligned_cols=205 Identities=24% Similarity=0.379 Sum_probs=169.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDH 86 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 86 (383)
+|+|+|||||||+|+.+.+..++.++++++|.+.+...... ..|.+..+.+..++...+.+.. .+++...+.+.+...
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA 80 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999998877666655 7788888888777766554321 233444555555544
Q ss_pred hc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~--~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
+. ...++||+.++|+.|+++|++++++||+....+...+ +.+|+. .+|+.++++++...+||+|+++..+++++|
T Consensus 81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 42 4689999999999999999999999999999999988 788998 999999999999999999999999999999
Q ss_pred CC-CCcEEEEecChhhhHHHHhcCCEE-EEecCCCCcccc--ccccchhhcccccc
Q 016755 163 ME-PSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~-p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+. |++|++|||+++|+++|+++|+.+ +++.++...... ...++.+++++.++
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 97 799999999999999999999999 888776433221 34567788887764
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=219.34 Aligned_cols=206 Identities=22% Similarity=0.358 Sum_probs=165.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
.|+|+|+|||||||+|+...+..+++.+++++|.+ .+.+......|.+....+........ ....+++...+...+..
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYEA 88 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999975 55556666666665554443322111 11123444555555554
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++++||+....+...+ +.+++..+|+.++++++...+||+|+++..+++++|++
T Consensus 89 ~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~ 167 (229)
T PRK13226 89 LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA 167 (229)
T ss_pred hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence 43 34789999999999999999999999999998888777 88899999999999998889999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc---cccccchhhcccccc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDL 214 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~---~~~~a~~vi~~l~e~ 214 (383)
|++|++|||+.+|+.+|+++|+.++++.++..... ....++.+++++.++
T Consensus 168 p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 168 PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 99999999999999999999999999988753221 123578888888874
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=228.60 Aligned_cols=206 Identities=25% Similarity=0.293 Sum_probs=169.2
Q ss_pred CccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
..++|||||||||+|+.. .+..+|.++++++|.+.+... .....|.+..+.+..++.....+...+++...+.+.+.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 679999999999999976 566799999999998876653 467888888888777654322111223344445555544
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ....++||+.++|+.|+++|++++|+||++...++..+ +.+|+..+|+.+++++++..+||+|++|..+++++|++
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~ 288 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI 288 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC
Confidence 44 34689999999999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+..|+++|+++|+.+|++..+... .....++.+++++.++.
T Consensus 289 Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~-~~l~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 289 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPI-YELGAADLVVRRLDELS 338 (381)
T ss_pred cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCh-hHhcCCCEEECCHHHHH
Confidence 999999999999999999999999999875322 22335678889998863
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=214.31 Aligned_cols=202 Identities=22% Similarity=0.300 Sum_probs=166.5
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHHHHhhh
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHL 87 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 87 (383)
||||+||||+|+...+..++..+++++|.+ .+...+....|.+..+.+..++...+...+.. ++...+.+.+....
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA 80 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence 689999999999998999999999999986 56666677778777777777766665544432 33334444444433
Q ss_pred c-cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 88 C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 88 ~-~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
. ...++||+.++|+.|+++|++++++|++....++..+ +++|+..+|+.++++++...+||+|+.+..+++++|++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 2 4689999999999999999999999999999999888 8899999999999999999999999999999999999999
Q ss_pred cEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 167 e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|++|||+.+|+.+|+++|+.++++.++...... ...++.+++++.++
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 9999999999999999999999999886543222 23567888888774
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=208.76 Aligned_cols=186 Identities=28% Similarity=0.448 Sum_probs=159.1
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+.++++|+||+||||+|+...+..++.++++++|.+.+........|....+.+..++...+...+.+++...+...+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVK 80 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999887777777788888877777777766665555555554444444
Q ss_pred hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
... ....++|+ .++|..|++. ++++++||++...+...+ +.+|+..+|+.+++++++...||+|++|..+++++|+
T Consensus 81 ~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~ 157 (188)
T PRK10725 81 SMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGV 157 (188)
T ss_pred HHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCC
Confidence 433 45678886 5899999875 899999999999999888 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+|++|++|||+.+|+++|+++|+++|.+..
T Consensus 158 ~~~~~l~igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 158 QPTQCVVFEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred CHHHeEEEeccHhhHHHHHHCCCEEEeecC
Confidence 999999999999999999999999998853
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=214.71 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=157.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--HH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 84 (383)
|++|+|+|||||||+|+.+.+..+++++++++|.+. .+......|.+....+..+... .+.+++...+... +.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 75 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAG----ASEAEIQAEFTRLEQIE 75 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhcc----CCcHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999864 2333444576666665554321 2233333333321 11
Q ss_pred h-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 D-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~-~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
. ......++||+.++|+.|+++|++++++||+........+ +..++ .+|+.+++++++...||+|+.+..+++++|+
T Consensus 76 ~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~ 153 (218)
T PRK11587 76 ATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGL 153 (218)
T ss_pred HhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCC
Confidence 1 2346789999999999999999999999999888776666 66777 4578888888888899999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
+|++|++|||+..|+++|+++|+.++++.++.... ....++.+++++.++..
T Consensus 154 ~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~~~~~el~~ 205 (218)
T PRK11587 154 APQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP-RLDEVDLVLHSLEQLTV 205 (218)
T ss_pred CcccEEEEecchhhhHHHHHCCCEEEEECCCCchh-hhccCCEEecchhheeE
Confidence 99999999999999999999999999998754322 23356788888888643
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=218.62 Aligned_cols=188 Identities=17% Similarity=0.242 Sum_probs=150.5
Q ss_pred CccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHH----------HHHHhCCCCCHHH--
Q 016755 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKHE-- 74 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~-- 74 (383)
++++|+|||||||+|+.. .+..++.++++++|.+++.+......|.+....+.. +...++.+.+...
T Consensus 1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIE 80 (253)
T ss_pred CceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHH
Confidence 378999999999999854 346789999999998877776666677665443332 3344444333322
Q ss_pred -HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCCCh
Q 016755 75 -FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP 151 (383)
Q Consensus 75 -~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp~p 151 (383)
+...+...+.... ....++||+.++|+.|+++|++++|+||++...++..+ +.+|+..+| +.+++++++..+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p 159 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAP 159 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCH
Confidence 2233333332222 45789999999999999999999999999999999888 788998885 8999999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 152 ~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
++|..+++++|+. |++|++|||+++|+.+|+++|+.+|+|.++..
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 9999999999995 99999999999999999999999999988754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=211.75 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=167.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|+||+||||+|+...+..++.++++++|.+.+.+. .....+.+..+.+..++..++.+.+.+++...+...+..
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999989999999999998776543 456667778888888888888776666666655554443
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc-EEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~-~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. ....++||+.++|+.| +++++++||++...+...+ +.+++..+|+ .++++++.+..||+|++|..+++++|+
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~ 157 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNV 157 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCC
Confidence 33 4578999999999999 3899999999999898888 8899999996 678888888999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|++|++|||++.|+++|+++|+.++++..+.........++.+++++.++.
T Consensus 158 ~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 158 NVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLP 209 (221)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999988653322222223455677777743
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=218.07 Aligned_cols=209 Identities=19% Similarity=0.263 Sum_probs=160.8
Q ss_pred cCCccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHH----------HHHhCCCCCHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKHE 74 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~ 74 (383)
|+++|+||||+||||+|+.. .+..++.++++++|.+++.+......|.+..+.+..+ ...++.+.+...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 34689999999999999854 3367899999999988776666666776654433332 233444333222
Q ss_pred ---HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCC
Q 016755 75 ---FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKP 149 (383)
Q Consensus 75 ---~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp 149 (383)
+...+...+.... ....++||+.++|+.|+++|++++|+||++...+...+ +.+++..+| +.+++++++..+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP 159 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRP 159 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCC
Confidence 2233333333322 45789999999999999999999999999999888888 777777764 89999999999999
Q ss_pred ChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCCc------------------------ccc-ccc
Q 016755 150 SPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTA 203 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~ 203 (383)
+|++|..+++++|+. |++|++|||+++|+++|+++|+.+|+|.++... ... ...
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 239 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG 239 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999996 699999999999999999999999999987542 111 345
Q ss_pred cchhhccccccC
Q 016755 204 ADEVINSLLDLR 215 (383)
Q Consensus 204 a~~vi~~l~e~~ 215 (383)
++.+++++.++.
T Consensus 240 a~~vi~~~~~l~ 251 (267)
T PRK13478 240 AHYVIDTIADLP 251 (267)
T ss_pred CCeehhhHHHHH
Confidence 678888887754
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=211.09 Aligned_cols=205 Identities=20% Similarity=0.311 Sum_probs=147.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHH---HHHcCCCCChhhhhhhcC-------CCHHHHHHHHHHHhCCCCCHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGREKHKIVG-------KTPLEEAAIIVEDYGLPCAKHEFVN 77 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~---~~~~g~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
|+++|+||+||||+|+...+..++..+ +..+|.+++.+....... ..........+..............
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAA 80 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHH
Confidence 378999999999999987777766654 445666665444322111 1000011111222221111222222
Q ss_pred HHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 78 EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 78 ~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
..............++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++.+..||+|++|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 81 FVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAA 159 (221)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHH
Confidence 222222223345789999999999999999999999999988888888 8899999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcc---ccccccchhhccccc
Q 016755 158 AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLD 213 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~---~~~~~a~~vi~~l~e 213 (383)
++++|++|++|++|||++ +|+.+|+++|+.++++.++.... .....++.+++++.+
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~e 219 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLRE 219 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHh
Confidence 999999999999999998 89999999999999998864422 112345677777765
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=212.78 Aligned_cols=208 Identities=25% Similarity=0.303 Sum_probs=165.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHH----hCCCC-CHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVED----YGLPC-AKHEFVNEVY 80 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~ 80 (383)
.++|+|+|||||||+|+.+.+..++..+++++|.+.. .+......+.+..+....++.. .+.+. ..+++...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998754 3445566777766655554322 12221 1223333344
Q ss_pred HHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 81 ~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
+.+........++||+.++|+.|+++|++++++||++...+...+ +.+++..+|+.++++++...+||+|++++.++++
T Consensus 91 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 444433334678999999999999999999999999999888888 7789999999999999998899999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
+|++|++|++|||+.+|+++|+++|+.+++|.++...... ...++.+++++.++.
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~ 226 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALL 226 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHH
Confidence 9999999999999999999999999999999886433222 236788898888863
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=199.73 Aligned_cols=179 Identities=30% Similarity=0.449 Sum_probs=151.0
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHhhh
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHL 87 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 87 (383)
+|+||+||||+|+...+..++.++++.+|.+.+........+.+..+.+..++...+.+.+... +...+.+.+....
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL 80 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998877767777888888888888887776554433 2333333343332
Q ss_pred ---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 88 ---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 88 ---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
....++||+.++|+.|+++|++++++||+.. ....+ +.+|+..+|+.++++++....||+|+.|..++++++++
T Consensus 81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 157 (185)
T TIGR01990 81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS 157 (185)
T ss_pred HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence 2357899999999999999999999998753 34456 78899999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
|++|++|||+++|+++|+++|+++++|.
T Consensus 158 ~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 158 PSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 9999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-26 Score=198.42 Aligned_cols=180 Identities=30% Similarity=0.497 Sum_probs=151.4
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 85 (383)
+++|+||+||||+|+...+..++..+++++|.+++........|.+..+.+..++...+...+..+ +...+.+.+.+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE 80 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999988765555566777888888888777644444333 33334444544
Q ss_pred hh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. ....++||+.++|+.|+++|++++++|++ ..+...+ +.+|+..+|+.++++++.+..||+|+++..+++++|+
T Consensus 81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~ 157 (185)
T TIGR02009 81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGV 157 (185)
T ss_pred HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCC
Confidence 43 34789999999999999999999999998 5567777 7899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
+|++|++|||+.+|+++|+++|++++.|
T Consensus 158 ~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 158 SPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 9999999999999999999999998875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=202.64 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=168.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSM 82 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 82 (383)
+++++|+||+||||+|+...+..++..+++++|.+ .+...+....+.+..+.+...+...+...+.. +....+...
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRH 83 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence 56899999999999999888889999999999876 35555667777777777766665544333332 233334444
Q ss_pred HHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 83 FSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 83 ~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
+.... ....++||+.++++.|+++|++++++|++....+...+ +.+++..+|+.+++++++...||+|+++..+++++
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 44433 24789999999999999999999999999999888888 78899999999999999989999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc--cccccchhhccccccC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~--~~~~a~~vi~~l~e~~ 215 (383)
+++|++|++|||+.+|+++|+++|+.++++.++..... ....++++++++.++.
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~ 218 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELL 218 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHH
Confidence 99999999999999999999999999999998654222 2345678888888753
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=202.33 Aligned_cols=195 Identities=25% Similarity=0.334 Sum_probs=156.0
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHc-CCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKY-GKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~-g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (383)
|+|||||||+|+...+..+++++++++ |.+ .+.+......|....+.+. ..+.+.. ....+..........
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~ 73 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMR----IMGLPLE---MEEPFVRESYRLAGE 73 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHH----HcCCCHH---HHHHHHHHHHHhhcc
Confidence 689999999999999999999999874 653 4555666667766554433 3343321 111111112222356
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.+++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++...+||+|+.++.+++++|++|++|+
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 789999999999999999999999999999988888 8899999999999999998999999999999999999999999
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|||+.+|+.+|+++|++++.+.++...... ...++.+++++.++
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 9999999999999999999999987644332 33567788888764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=208.88 Aligned_cols=201 Identities=19% Similarity=0.302 Sum_probs=161.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (383)
+++++|+|||||||+|+.+.+..+++++++++|.. ++.+......+......+. .++.+ ....++...+.+.+.
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~ 135 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVR----RAGLSPWQQARLLQRVQRQLG 135 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHH----HcCCCHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999986 5555566666665544433 33433 123344455555555
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
......+++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++. +++++.+..++++++++
T Consensus 136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~ 211 (273)
T PRK13225 136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQ 211 (273)
T ss_pred hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcC
Confidence 55566789999999999999999999999999999999998 889999999998887764 35678999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++.
T Consensus 212 p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~ 264 (273)
T PRK13225 212 PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLL 264 (273)
T ss_pred hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHH
Confidence 999999999999999999999999999987544322 345788999988864
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=196.76 Aligned_cols=213 Identities=38% Similarity=0.581 Sum_probs=188.0
Q ss_pred ccccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 016755 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 3 ~~~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (383)
..+...+.+++||+||||+|++..+..+++..+.++|..+++.......|....+..+.++.....+.+.+++..+..+.
T Consensus 4 ~~~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 4 KSLSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cccccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 33456688999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe--CCCCCCCCCChHHHHHHHHH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~--~~~~~~~kp~p~~~~~~~~~ 160 (383)
....+....+.||+.++++.|+.+|++++++|++++...+..+..+-++...|+.++. +.++..+||+|++|..++++
T Consensus 84 ~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~ 163 (222)
T KOG2914|consen 84 LDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKR 163 (222)
T ss_pred HHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHh
Confidence 9998999999999999999999999999999999999888888444447788888888 77888999999999999999
Q ss_pred cCCCC-CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 161 LNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 161 lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|..| +.|++++|++..+++|+++||.+++++...........++.+++++.+..
T Consensus 164 l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 164 LGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred cCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 99999 99999999999999999999999999984333333445567777776643
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-25 Score=198.27 Aligned_cols=202 Identities=40% Similarity=0.671 Sum_probs=164.8
Q ss_pred cCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhccCCCC
Q 016755 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKAL 93 (383)
Q Consensus 16 lDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (383)
|||||+|+...+..+|..+++++|...+.+......|.+..+.+..++...+.+. ..+.+.......+........++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 7999999999999999999999999877666777888888888888877766652 34444444444444444567889
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC--CCCCCCCChHHHHHHHHHcC---CCCCcE
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSS 168 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~--~~~~~kp~p~~~~~~~~~lg---~~p~e~ 168 (383)
||+.++|+.|+++|++++++||+....+...+.+..++..+|+.+++++ ++..+||+|++|..++++++ ++|++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 9999999999999999999999987655544434557888999999999 88889999999999999997 999999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
++|||+..|+++|+++|++++++.++.........++.+++++.++...
T Consensus 161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~ 209 (220)
T PLN02811 161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE 209 (220)
T ss_pred EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence 9999999999999999999999987653333334678899999886543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=199.43 Aligned_cols=200 Identities=21% Similarity=0.264 Sum_probs=151.9
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC------------C-CHH----HHHHHHHHHhCCCCC
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------K-TPL----EEAAIIVEDYGLPCA 71 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g------------~-~~~----~~~~~~~~~~~~~~~ 71 (383)
+|+|+||+||||+|+...+..++.++++++|.+.+......+.+ . ... ..+..++...+.+..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 58999999999999999888899999999887765433221111 1 111 112223344443322
Q ss_pred HHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC
Q 016755 72 KHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (383)
Q Consensus 72 ~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~ 150 (383)
.+.+.. .+.... ...+++||+.++|+.|++. ++++++||+....+...+ +.+++..+|+.++++++.+..||+
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~ 154 (224)
T TIGR02254 81 EALLNQ----KYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPD 154 (224)
T ss_pred HHHHHH----HHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCC
Confidence 222222 222222 2468999999999999999 999999999999888888 889999999999999999999999
Q ss_pred hHHHHHHHHHc-CCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 151 PDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 151 p~~~~~~~~~l-g~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
|+++..+++++ |++|++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 99999999999 99999999999998 799999999999999987543322223456778887764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=198.57 Aligned_cols=197 Identities=22% Similarity=0.340 Sum_probs=143.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh--cCC-----------CHHHH----HHHHHHHhCCCC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGK-----------TPLEE----AAIIVEDYGLPC 70 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~--~g~-----------~~~~~----~~~~~~~~~~~~ 70 (383)
++|+|+|||||||+|.. ...+++++++.+|...+.+....+ .+. ...+. +..+...++.+
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVT- 78 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCC-
Confidence 68999999999999854 356778888888887655443332 111 11110 01122222221
Q ss_pred CHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC
Q 016755 71 AKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (383)
Q Consensus 71 ~~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp 149 (383)
..++.. .+...+ ....++||+.++|+.|+ +|++++++||+....+...+ +.+|+..+|+.++++++.+..||
T Consensus 79 -~~~~~~----~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP 151 (224)
T PRK09449 79 -PGELNS----AFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKP 151 (224)
T ss_pred -HHHHHH----HHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCC
Confidence 222222 222222 24679999999999999 57999999999999888888 88999999999999999999999
Q ss_pred ChHHHHHHHHHcCCC-CCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 150 SPDIFLEAAKRLNME-PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~-p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+|++|..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999999999999985 48999999998 699999999999999986432211112457788887764
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=202.20 Aligned_cols=208 Identities=26% Similarity=0.406 Sum_probs=153.2
Q ss_pred CCccEEEEecCCcccccH-HHHHHHHHHHHHHcCC-CC--Chhhhhh--hcCCCHHHHHHHHHHHhCCC--------CCH
Q 016755 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGK-EW--DGREKHK--IVGKTPLEEAAIIVEDYGLP--------CAK 72 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~-~~~~~a~~~~~~~~g~-~~--~~~~~~~--~~g~~~~~~~~~~~~~~~~~--------~~~ 72 (383)
..+++|||||||||+|+. ..+..++..+++++|. +. +.+.... ..+.+.......+ ...+.+ .+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYF-NENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHH-HHcCCCccccccCCccc
Confidence 468999999999999999 9999999999999998 33 3332221 1454544433332 222221 111
Q ss_pred ---HHHHH----HHHHHHHhhhc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC---CcccCcEEEe
Q 016755 73 ---HEFVN----EVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVG 140 (383)
Q Consensus 73 ---~~~~~----~~~~~~~~~~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~g---l~~~f~~i~~ 140 (383)
++... .....+...+. .+.++||+.++|+.|+++|++++++||+....+...+ +..+ +..+|+.+ +
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-A 194 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-e
Confidence 11222 22233444332 3589999999999999999999999999999888777 4443 23334444 7
Q ss_pred CCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 141 ~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
++++..+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++.+.++.........++.+++++.++...
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 88888899999999999999999999999999999999999999999999988755444444678889999886544
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=194.80 Aligned_cols=180 Identities=18% Similarity=0.320 Sum_probs=136.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh---------hhhhcCC--C----HHHHHHHHHHHhCCCCCHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---------KHKIVGK--T----PLEEAAIIVEDYGLPCAKH 73 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~---------~~~~~g~--~----~~~~~~~~~~~~~~~~~~~ 73 (383)
+|+|+||+||||+|+... ..++.+++...+....... .....|. . ..+.+..++..++.+....
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDES 79 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHH
Confidence 578999999999999864 3444444332221111000 0011111 1 1244555666667654332
Q ss_pred HHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHH
Q 016755 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~ 153 (383)
. .. .+.+.+....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++++..||+|++
T Consensus 80 ~-~~----~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~ 153 (198)
T TIGR01428 80 A-AD----RLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQV 153 (198)
T ss_pred H-HH----HHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHH
Confidence 2 22 23333446789999999999999999999999999999998888 788999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|..+++++|++|++|++|||+++|+.+|+++|+.++++++..
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999998843
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=217.81 Aligned_cols=204 Identities=16% Similarity=0.215 Sum_probs=161.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcC------CCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
.+|+++|||||||||+|+.+.+..+|.+++++++ ...+.+.+....|.+..+.+..++...+.. ..++....+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~~~~~ 316 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQTDAYF 316 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHHHHHH
Confidence 3568999999999999999999999999998874 222445667788888888777766544322 112233334
Q ss_pred HHHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 80 YSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 80 ~~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
.+.+.... ...+++||+.++|+.|+++|++++++||+....+...+ +++++..+|+.+++++++. .||+|+.+..+
T Consensus 317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~a 394 (459)
T PRK06698 317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSI 394 (459)
T ss_pred HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHH
Confidence 44443332 35689999999999999999999999999999999999 8899999999999998874 47888999999
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+++++ |++|++|||+++|+.+|+++|+.++++.++.........++++++++.++
T Consensus 395 l~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 395 LNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred HHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 98864 78999999999999999999999999988654333334568888888775
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=190.86 Aligned_cols=178 Identities=28% Similarity=0.352 Sum_probs=137.0
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh------------------cCCCHHHH----HHHHHHHhC
Q 016755 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDYG 67 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~------------------~g~~~~~~----~~~~~~~~~ 67 (383)
|+|+||+||||+|+...+..++.++++++|.+.+....... .+....+. +...+...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999888899999999999988765332110 13344332 333333344
Q ss_pred CCCCHHHHHHHHHHHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 68 LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
.+ +...+...+.+.+.... ....++||+.++|+.|+++|++++++||+... +...+ +.+|+..+|+.++++++++
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l-~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLL-EALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHH-HHCCcHHhcceEEeecccC
Confidence 22 22233333333332221 23578999999999999999999999998765 46666 7889999999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~ 190 (383)
.+||+|++|..+++++|++|++|++|||+. +|+.+|+++|+.+++
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999999999999999999999998 899999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=228.54 Aligned_cols=208 Identities=25% Similarity=0.363 Sum_probs=172.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
.++++|+|||||||+|+...+..++.++++++|.+++.+......+.+..+.+..+....+.. .+.++....+.+.+.+
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 152 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE 152 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999988877777888888877776666655543 3344444444444433
Q ss_pred hh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 86 HL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 86 ~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~-~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
.+ ....++||+.++|+.|+++|++++|+||+....++..+ +.+|+. .+|+.+++++++..+||+|++|..+++++
T Consensus 153 ~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 153 KYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred HhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 32 12347999999999999999999999999999998888 788996 78999999999999999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-ccccchhhccccccC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
|++|++|++|||+..|+++|+++||+++++.++...... ...++.+++++.++.
T Consensus 232 gv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 232 GVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred CcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 999999999999999999999999999999986543222 346678888888764
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=187.49 Aligned_cols=175 Identities=31% Similarity=0.531 Sum_probs=147.2
Q ss_pred EEEecCCcccccHHHHHHHHHH-HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 016755 12 VILDLDGTLLNTDGMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
|+||+||||+|+...+..++.. +++.++.+.+........+....+.+..++...+.. ...+.+.+.+. ......
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 76 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKL 76 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhcc
Confidence 7999999999998888888887 577888776666666667777777777777766432 22222222222 123578
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
+++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++.+..||+|+.|..+++++|++|++|++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 89999999999999999999999999999999888 88899999999999999999999999999999999999999999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
|||+..|+.+|+++|+.+|+|
T Consensus 156 vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EESSHHHHHHHHHTTSEEEEE
T ss_pred EeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999986
|
... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=192.59 Aligned_cols=108 Identities=15% Similarity=0.230 Sum_probs=100.1
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++++.+||+|++|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 56789999999999999999999999999999888888 78999999999999999999999999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEE-EEecCCCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEV-VAVPSLPK 196 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~ 196 (383)
|++|||++.|+++|+++|+.+ +.|..+..
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 999999999999999999974 66766543
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=194.27 Aligned_cols=201 Identities=16% Similarity=0.203 Sum_probs=143.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC------CChhhhhhhcC---C-----------CHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE------WDGREKHKIVG---K-----------TPLEEAAIIVEDY 66 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~------~~~~~~~~~~g---~-----------~~~~~~~~~~~~~ 66 (383)
.++|+|+||+||||+|+...+..+++++++..+.. +.........+ . -....+..++..+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 46899999999999999998888888877654211 11111111000 0 0112334455666
Q ss_pred CCCCCHH-HHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 67 GLPCAKH-EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 67 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
+.+.... .........+........++||+.++|+.|++. ++++++||++.. + +..|+..+|+.++++++++
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~~ 160 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPHG 160 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhceeEecccCC
Confidence 6543221 112222233333334578999999999999875 999999998765 3 5679999999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCc----cccccccchhhcccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ----THRYTAADEVINSLLDL 214 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~----~~~~~~a~~vi~~l~e~ 214 (383)
..||+|++|..+++++|++|++|++|||++ .|+.+|+++|+.++++...... ......++..+++|.++
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 999999999999999999999999999995 9999999999999999875322 11112456778887774
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-23 Score=182.09 Aligned_cols=172 Identities=16% Similarity=0.232 Sum_probs=135.0
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcC-CCCChhhhhhhcCCCHH--------HHHHHHHHHhC-----CCCCHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPL--------EEAAIIVEDYG-----LPCAKHEFV 76 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g-~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~-----~~~~~~~~~ 76 (383)
+|+|||||||+|+.+.+..+++.+++++| ...+.+.+....|.+.. ..+...+.... .....+++.
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAVT 81 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHHH
Confidence 68999999999999999999999999997 56676666666654321 11222222111 123345555
Q ss_pred HHHHHHHHhhh----------ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC
Q 016755 77 NEVYSMFSDHL----------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 146 (383)
Q Consensus 77 ~~~~~~~~~~~----------~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~ 146 (383)
..+.+.+.... ....+.+++.++|+.|++.|++++++||++...++..+ +.+|+..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~ 160 (197)
T TIGR01548 82 AQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCPP 160 (197)
T ss_pred HHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCCC
Confidence 55555554321 12245566799999999999999999999999999988 88999999999999999877
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
||+|+.+..+++++|++|++|++|||+++|+.+|+++
T Consensus 161 -KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 -KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-23 Score=182.67 Aligned_cols=179 Identities=21% Similarity=0.217 Sum_probs=125.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-----
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF----- 83 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 83 (383)
+|+|+|||||||+|+.. ....|...+...|.+ .........+.........+. .+ ..+.+++...+.+.+
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~--~g-~~~~~~~~~~~~~~~~~~~~ 76 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFE--RG-ELTAEAFDGLFRHEYGLRLG 76 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHH--cC-CCCHHHHHHHHHHHhccccC
Confidence 67999999999999966 555565554444433 222222333333222211110 11 112222222222211
Q ss_pred ---------Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHH--HHHHHHhhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 84 ---------SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 84 ---------~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~--i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
.... ....++||+.++|+.|+++|++++++||+.... ....+ ...++..+|+.++++++.+..||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p 155 (211)
T TIGR02247 77 HDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDP 155 (211)
T ss_pred CCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCH
Confidence 1111 246789999999999999999999999987543 22223 3457888999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++|..+++++|++|++|++|||+..|+.+|+++|+.++++.+
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999999999999999976
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=174.48 Aligned_cols=175 Identities=30% Similarity=0.429 Sum_probs=125.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHH------HHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE------VYSMFS 84 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (383)
+|+|||||||+|+.+.+... .. .......+........ .........+...++...+...+... ....+.
T Consensus 1 ~vlFDlDgtLv~~~~~~~~~-~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (183)
T TIGR01509 1 AILFDLDGVLVDTSSAIEKL-VN--REEFPLVPDELGVSAV-GKLELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYD 76 (183)
T ss_pred CeeeccCCceechHHHHHHH-HH--HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHH
Confidence 48999999999998766541 11 2222222222222221 11222222232324444333332221 223333
Q ss_pred hhhcc--CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 85 DHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 85 ~~~~~--~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
..... .+++||+.++|+.|+++|++++++||++... ...+ .++|+..+|+.++++++.+.+||+|+.|..+++++|
T Consensus 77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~ 154 (183)
T TIGR01509 77 AILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG 154 (183)
T ss_pred HHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC
Confidence 32333 6899999999999999999999999999887 5444 558999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
++|++|++|||++.|+.+|+++|+.+|+|
T Consensus 155 ~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 155 LKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=178.03 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=132.0
Q ss_pred cEEEEecCCcccccHHHHH-HHHHHHHHHcCCCC---------ChhhhhhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEW---------DGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNE 78 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~-~a~~~~~~~~g~~~---------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (383)
.+|+||+||||+|.+.... ..+.. ..+.+. .........| ....+....+.+.++.+.+.+.+...
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSD---LSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHG 77 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHH---hcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3799999999999854221 11211 111110 0111122223 45566667777777776655555444
Q ss_pred HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
+.+.+ ..++||+.++|+.|+++|++++++||++...+...+....++..+|+.++++++++.+||+|++|+.++
T Consensus 78 ~~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~ 151 (199)
T PRK09456 78 WQAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVL 151 (199)
T ss_pred HHHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHH
Confidence 43322 358999999999999999999999999988766555334578889999999999999999999999999
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++|++|++|++|||+..|+.+|+++|+.++++...
T Consensus 152 ~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 152 QAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred HHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999999999999774
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=174.35 Aligned_cols=170 Identities=21% Similarity=0.257 Sum_probs=125.7
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHH-----HcCCCCChhh-hh----hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMFSEVLKTFLV-----KYGKEWDGRE-KH----KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~~a~~~~~~-----~~g~~~~~~~-~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
++|+|||||||+|+...+..++++.+. .+|.+..... +. ...|..... ++...+ .+.+.+...+
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~----~~~~~~--~~~~~~~~~~ 74 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAG----LMILHE--IDADEYLRYV 74 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHH----HHHhhC--CCHHHHHHHH
Confidence 479999999999997777777776543 4455432211 11 112222222 122222 2333333322
Q ss_pred HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC----CCCChHHHH
Q 016755 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFL 155 (383)
Q Consensus 80 ~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~----~kp~p~~~~ 155 (383)
.+. ......+++||+.++|+.|+ ++++++||++...+...+ +.+|+..+|+.++++++.+. .||+|++|.
T Consensus 75 ~~~--~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~ 148 (184)
T TIGR01993 75 HGR--LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE 148 (184)
T ss_pred hcc--CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence 221 11235678999999999997 479999999999999888 88899999999999998887 599999999
Q ss_pred HHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
.+++++|++|++|++|||+..|+.+|+++|+.+++|
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=176.75 Aligned_cols=124 Identities=28% Similarity=0.405 Sum_probs=109.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+++|++.+.|+.++++ ++++++||+........+ ..+|+.++|+.++++++++..||+|++|..+++++|++|++|
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 999999999888888888 788999999999999999999999999999999999999999
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCCcc-ccccccchhhcccccc
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~ 214 (383)
++|||+. ||+.+|+++||.++++....... .....++..+.++.++
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9999999 78899999999999998854322 1113456677777764
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-22 Score=173.70 Aligned_cols=187 Identities=14% Similarity=0.179 Sum_probs=128.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-h
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (383)
|+|+|+|||||||+|+. .++..+++++|.+. +.+....+.......... ++. +.......+...... .
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~ 69 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDPGEL---FGC--DQELAKKLIEKYNNSDF 69 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCHHHH---hcc--cHHHHHHHhhhhhHHHH
Confidence 47899999999999954 45667777887643 343444443322222222 221 222222222222212 2
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc----cCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~----~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.....++||+.++|+.|++. ++++++||.+.......+ ..+++.. +|+.++++++ .||+|+.+..+++++|
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG 144 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC
Confidence 24577999999999999987 578888887766544444 5566654 5577777776 3678999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhc--CCEEEEecCCCCccccccccchhhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~a--G~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
|++|+||||+.+|+.+|+++ |+.+++++++.. .....+++++.++.++
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI 194 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence 89999999999999999999 999999988754 2223456888888774
|
2 hypothetical protein; Provisional |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-21 Score=162.28 Aligned_cols=154 Identities=25% Similarity=0.406 Sum_probs=120.1
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
+|+||+||||+|+...+..++++++++++. +.+.+....|...... .... ..+.+ +.......
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~-------------~~~~~-~~~~~~~~ 63 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIA-------------TSFEE-LLGYDAEE 63 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHH-------------HHHHH-HhCcchhh
Confidence 489999999999999999999999998875 2233333333222111 1111 11111 11122345
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
..+||+.++|+.|+++|++++++||+....+...+ +.+ +..+|+.++++++.. +||+|+++..+++++|++| +|++
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence 56799999999999999999999999999988888 555 778899999999888 9999999999999999999 9999
Q ss_pred EecChhhhHHHHhcC
Q 016755 171 IEDSVIGVVAGKAAG 185 (383)
Q Consensus 171 VGDs~~Di~~a~~aG 185 (383)
|||+..|+.+|+++|
T Consensus 140 iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 140 VGDNLNDIEGARNAG 154 (154)
T ss_pred EeCCHHHHHHHHHcc
Confidence 999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=169.36 Aligned_cols=161 Identities=18% Similarity=0.291 Sum_probs=123.6
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCC---CC-----hhhhhhhcCC--CHHH----HHHHHHHHhCCCCCHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE---WD-----GREKHKIVGK--TPLE----EAAIIVEDYGLPCAKHEFV 76 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~---~~-----~~~~~~~~g~--~~~~----~~~~~~~~~~~~~~~~~~~ 76 (383)
+|+||+||||+|+...+..+++.++...+.. +. ........+. ...+ .+..++..++.+.+.+ .
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-Y- 78 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-H-
Confidence 5899999999999998888888877664421 11 1111222221 1122 4566667777765443 2
Q ss_pred HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHH
Q 016755 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~ 156 (383)
.+.+...+....++||+.++|+ +++++||++...+...+ +++|+..+|+.++++++++..||+|+.|..
T Consensus 79 ---~~~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~ 147 (175)
T TIGR01493 79 ---GERLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYEL 147 (175)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence 2333333446789999999998 37899999999999888 888999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+++++|++|++|++|||+.+|+.+|+++
T Consensus 148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 148 VFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999874
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=164.92 Aligned_cols=187 Identities=26% Similarity=0.265 Sum_probs=139.7
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh------------------cC-CCHHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VG-KTPLEEAAIIVED 65 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~------------------~g-~~~~~~~~~~~~~ 65 (383)
..+++|+|+||++|||+...+.....+..+.+.+|.+++....... .+ ....+.+..+...
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~ 82 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVES 82 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHH
Confidence 4568999999999999987666778888899999988654433211 12 2344444434333
Q ss_pred hCCCCCHHHHHHHHH-----HHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE
Q 016755 66 YGLPCAKHEFVNEVY-----SMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV 139 (383)
Q Consensus 66 ~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~ 139 (383)
.......+. ..... ..+.... ......++..++++.|++.|..+.++||.....- ..+ ..+++..+||.++
T Consensus 83 ~f~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l-~~~~l~~~fD~vv 159 (237)
T KOG3085|consen 83 TFGKAGIDY-EEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLL-LPLGLSAYFDFVV 159 (237)
T ss_pred Hhccccchh-HHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHh-hccCHHHhhhhhh
Confidence 222111111 11111 1111111 2456778888999999999999999999887654 455 6789999999999
Q ss_pred eCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 140 GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 140 ~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.+.+.+..||+|.+|+.+++++++.|++|++|||+. ||+++|+++|++++.|...
T Consensus 160 ~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 160 ESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred hhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 999999999999999999999999999999999999 8999999999999999864
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-20 Score=163.71 Aligned_cols=188 Identities=19% Similarity=0.196 Sum_probs=125.9
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhhc-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
+.+++++++|||||||+|+. .+.++++.+|.+...... .... + ....+.....+..+. .... +
T Consensus 10 ~~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~-~------- 75 (219)
T TIGR00338 10 LLRSKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK-GLPV-E------- 75 (219)
T ss_pred hhccCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC-CCCH-H-------
Confidence 34678999999999999984 345556666654332221 1111 1 122222222222221 1111 1
Q ss_pred HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE-------eCC---CCCCCCCCh
Q 016755 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GSD---EVRTGKPSP 151 (383)
Q Consensus 82 ~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~-------~~~---~~~~~kp~p 151 (383)
.+.......+++||+.++|+.|+++|++++++|++....+...+ +.+|+..+|...+ .+. ....++|+|
T Consensus 76 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 154 (219)
T TIGR00338 76 LLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKG 154 (219)
T ss_pred HHHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccH
Confidence 12222345679999999999999999999999999999888888 7889887775322 111 123457799
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
..+..++++++++|++|++|||+.+|+.+|+++|+.+++ .. .......++.++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~---~~~~~~~a~~~i~~~ 210 (219)
T TIGR00338 155 KTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA---KPKLQQKADICINKK 210 (219)
T ss_pred HHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC---CHHHHHhchhccCCC
Confidence 999999999999999999999999999999999998654 22 122223556666543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-19 Score=156.71 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=116.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh--hhhcCCCHH-HHHHHHHHHh-CCCCCHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGKTPL-EEAAIIVEDY-GLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~--~~~~g~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 83 (383)
|+|+|+|||||||+|....+ ..+...++........ ....|.... +......... +... .. ..+.+
T Consensus 3 ~~k~viFD~DGTLid~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~---~~~~~ 72 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSW----EYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSG---RL---RREEV 72 (201)
T ss_pred cceEEEEeCCCCCcCCccHH----HHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhccc---CC---CHHHH
Confidence 58899999999999976433 2233334433211111 111122222 1111111111 0000 00 01122
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC----------ChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP----------SPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp----------~p~~ 153 (383)
...+...+++||+.++|+.|+++|++++++|++...+++..+ +.+|+..+|...+..++.+..+| +++.
T Consensus 73 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 73 EEIFKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEA 151 (201)
T ss_pred HHHHHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHH
Confidence 233345789999999999999999999999999999999888 78888877766665544443333 3467
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+..+++++|+++++|++|||+.+|+++++.+|+.+++.+.+
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 88889999999999999999999999999999988776653
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-18 Score=150.76 Aligned_cols=184 Identities=13% Similarity=0.083 Sum_probs=125.5
Q ss_pred ccEEEEecCCcccccHHH-------HHHHHHHHHHHcCCCCChhhhhhhcCCC-HHHHHHHHHHHhCCC---CCHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGREKHKIVGKT-PLEEAAIIVEDYGLP---CAKHEFVN 77 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~-------~~~a~~~~~~~~g~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~---~~~~~~~~ 77 (383)
+++|++|+.||+.+..-+ ..+.+...+..+.-...........+.. ..+....+......+ ....++..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg 80 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG 80 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 579999999999986322 2233333343332111112222222221 123333333332222 22333433
Q ss_pred H-HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc---CCcccCcEEEeCCCCCCCCCChHH
Q 016755 78 E-VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDI 153 (383)
Q Consensus 78 ~-~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~---gl~~~f~~i~~~~~~~~~kp~p~~ 153 (383)
. +.+.|........++||+.++|+.|+++|++++|+||++...+...+ ++. ++..+|+.++... ...||+|+.
T Consensus 81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~~--~g~KP~p~~ 157 (220)
T TIGR01691 81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDTT--VGLKTEAQS 157 (220)
T ss_pred HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEeC--cccCCCHHH
Confidence 3 45555554456789999999999999999999999999988877766 443 5667777766432 236999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|..+++++|++|++|++|||+..|+.+|+++|+.++++.+..
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999999999999999987754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=154.05 Aligned_cols=192 Identities=17% Similarity=0.164 Sum_probs=128.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
+++|+|+|||||||+|++ .+..+++.+|....... ...+.+ .+..+.+...+..... ..+ .+...+
T Consensus 10 ~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 78 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SLS----QVEEFL 78 (224)
T ss_pred ccCCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CHH----HHHHHH
Confidence 468999999999999984 34667777876433222 233333 2334444443333321 122 122222
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccCcEE--------EeCCC----CCCCCC
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVI--------VGSDE----VRTGKP 149 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~--~~f~~i--------~~~~~----~~~~kp 149 (383)
.. ....++||+.++|+.|+++|++++|+|++....++..+ +.+|+. .+|... +.+.+ ...+++
T Consensus 79 ~~--~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 79 EK--RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred HH--ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 22 13568999999999999999999999999999999888 778886 345321 11221 124577
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc-cccccchhhcccccc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~a~~vi~~l~e~ 214 (383)
+|+.++.+++++|. ++|++|||+.+|+.+++++|+.+++...+..... ....++.+++++.++
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 89999999998875 6899999999999999998888765433322211 233567888887764
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=150.47 Aligned_cols=122 Identities=25% Similarity=0.316 Sum_probs=96.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEeC-----------CC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DE 143 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~~-----------~~ 143 (383)
.+++||+.++|+.|+++|++++++||++. ..+...+ ...++. |+.++.+ ++
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCC
Confidence 46899999999999999999999999985 2333344 444444 5665543 34
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE-EEecCCCCccccc-cccchhhcccccc
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRY-TAADEVINSLLDL 214 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~~-~~a~~vi~~l~e~ 214 (383)
...+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+ +++.++....... ..++.+++++.++
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 557899999999999999999999999999999999999999998 7888865432222 3578888888774
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=149.84 Aligned_cols=122 Identities=29% Similarity=0.344 Sum_probs=96.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEeC-----CCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~~-----~~~~~~kp 149 (383)
+.++||+.++|+.|+++|++++++||... ..+...+ +.+|+ .|+.++.+ ++...+||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 46899999999999999999999999863 2233344 45555 36776653 34577899
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-cccc--chhhcccccc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL 214 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a--~~vi~~l~e~ 214 (383)
+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...+ +.+++++.++
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 999999999999999999999999999999999999999999876432222 2234 6777777764
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.3e-18 Score=159.06 Aligned_cols=184 Identities=15% Similarity=0.161 Sum_probs=123.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh--hcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK--IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
..+++|+|||||||+.. +.+.++++..|.......... ..+ ....+.+...+..+ ........
T Consensus 108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l--~g~~~~il------- 173 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL--KGADANIL------- 173 (322)
T ss_pred cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh--CCCCHHHH-------
Confidence 46899999999999944 355666666776544332222 122 12223222222211 11111211
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc-------EEEeCC---CCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~-------~i~~~~---~~~~~kp~p~~ 153 (383)
.......+++||+.++++.|++.|++++|+|++...+++..+ +.+++...+. ..+.+. +...++||++.
T Consensus 174 ~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~ 252 (322)
T PRK11133 174 QQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT 252 (322)
T ss_pred HHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence 122235789999999999999999999999999988887766 6788754332 112121 23457899999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
++.+++++|+++++|++|||+.||+.|++.+|+.+++ +. .+.....++.+++
T Consensus 253 L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~ 304 (322)
T PRK11133 253 LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec
Confidence 9999999999999999999999999999999998876 22 2333335566665
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-18 Score=145.07 Aligned_cols=102 Identities=27% Similarity=0.400 Sum_probs=84.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEe----CCCCCCCCCCh
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGKPSP 151 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~----~~~~~~~kp~p 151 (383)
+++||+.++|+.|+++|++++++||.+. ..+...+ +.+|+... ..+++ +++....||+|
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCCCCH
Confidence 5899999999999999999999999873 3445555 66777521 12222 34556689999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++..++++++++|++|++|||+..|+++|+++|+.+++++.+
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 9999999999999999999999999999999999999999863
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-18 Score=147.15 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChH--------HHHHHHHhhcCCcccCcEEE-eCCCCCCCCCChHHHHHHHHH
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~--------~i~~~l~~~~gl~~~f~~i~-~~~~~~~~kp~p~~~~~~~~~ 160 (383)
..++||+.++|+.|+++|++++++||+... .....+ +.+|+..+|..+. ++++....||+|+++..++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 368999999999999999999999998742 122234 4566644332222 355567899999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc------c--cccccchhhcccccc
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT------H--RYTAADEVINSLLDL 214 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~------~--~~~~a~~vi~~l~e~ 214 (383)
++++|++|++|||+.+|+.+|+++|+.++++.++.... . ....++++++++.++
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99999999999999999999999999999998864321 1 123467778777764
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=146.36 Aligned_cols=145 Identities=15% Similarity=0.093 Sum_probs=107.9
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-c
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-C 88 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 88 (383)
+|+|||||||+|+.+.+ .+|.+. +...+....+... +. .+.... .
T Consensus 65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~~--------------------w~----~~~~~~~~ 111 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQVF--------------------WE----KVNNGWDE 111 (237)
T ss_pred EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChHH--------------------HH----HHHHhccc
Confidence 89999999999998766 155543 3332222222211 11 111111 2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCC----ChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~----~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...+.+++.++|+.++++|++++++||. .+..++..+ +.+|+..+|+.++++++....||++. .+++++++
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i- 186 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI- 186 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC-
Confidence 3467777999999999999999999998 556666666 78999999999999888777777765 35567776
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
++||||+.+|+.+|+++|++++.+.++..
T Consensus 187 ---~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ---eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 79999999999999999999999988643
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.4e-17 Score=133.05 Aligned_cols=98 Identities=23% Similarity=0.430 Sum_probs=84.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCC--------hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc-
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL- 161 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~--------~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l- 161 (383)
.++|++.++|+.|+++|++++++||++ ...+...+ +.+++.. +.++.+. ...||+|++|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~~--~~~~~~~--~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVPI--DVLYACP--HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCCE--EEEEECC--CCCCCChHHHHHHHHHcC
Confidence 588999999999999999999999998 77777777 7778753 3333333 56799999999999999
Q ss_pred CCCCCcEEEEec-ChhhhHHHHhcCCEEEEecC
Q 016755 162 NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 162 g~~p~e~l~VGD-s~~Di~~a~~aG~~~i~v~~ 193 (383)
+++|++|+|||| +.+|+.+|+++|+.++++++
T Consensus 100 ~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 100 EIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 599999999999 68999999999999999864
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.9e-18 Score=144.81 Aligned_cols=106 Identities=16% Similarity=0.071 Sum_probs=94.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcCCc---------ccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~-~~~~i~~~l~~~~gl~---------~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
...++||+.++|+.|+++|++++++||+ ....+...+ +.+++. ++|+.++++++....||.+.+++.+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 5678999999999999999999999998 777778777 788888 99999999988666677777777777
Q ss_pred HHc--CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 159 KRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 159 ~~l--g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
+.+ |++|++|+||||++.|+.+|+++|+.++++.++.
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 777 8999999999999999999999999999998864
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-17 Score=138.93 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=90.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEE-e----CCCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~-~----~~~~~~~kp 149 (383)
++++||+.++|+.|+++|++++++||.+ ...+...+ +.+|+. |+.++ + +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 4789999999999999999999999973 44566666 778886 66554 4 478888999
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
+|+++..++++++++|++|+||||+.+|+.+|+++|+.++++.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 9999999999999999999999999999999999999999998853
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=142.41 Aligned_cols=165 Identities=15% Similarity=0.173 Sum_probs=112.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhc-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
-++|+||+||||++.+..+ . +++.++. ....... .+. + .+..+.+...+..+... .. +.+.+.+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~-~~----~~~~~~~~- 70 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN-LK----EEIIQFLL- 70 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC-ch----HHHHHHHH-
Confidence 3489999999999997654 2 2333332 1122221 111 1 24455656666554322 11 12222222
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cC--cEEEeCCCCCCCCCChHH--------
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI-------- 153 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f--~~i~~~~~~~~~kp~p~~-------- 153 (383)
....++||+.++|+.|+++|++++|+|++...+++..+ +.+ +.. .+ +..+.++.....||+|..
T Consensus 71 --~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 71 --ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred --hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 35789999999999999999999999999999999888 555 432 22 334556666667887754
Q ss_pred --HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 154 --FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 154 --~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
...++++++.++.+|++|||+.+|+.+|+++|+.++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 357888999999999999999999999999999433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.3e-16 Score=136.96 Aligned_cols=184 Identities=17% Similarity=0.137 Sum_probs=114.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYG-LPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 86 (383)
|++|+|||||||++ ..|..+++++|.+..... ..+ ......+..-+.... ...+.+++ ...
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------~~~ 63 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRAT---TRDIPDYDVLMKQRLDILDEHGLGLADI--------QEV 63 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHHHH---hcCCCCHHHHHHHHHHHHHHcCCCHHHH--------HHH
Confidence 57899999999993 244556667775432110 000 112222211111110 01112222 233
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-C---CCCCCCChHHHHHHHHHcC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~---~~~~kp~p~~~~~~~~~lg 162 (383)
.....++||+.++|+.|+++ ++++++|++...+++..+ +.+|+..+|...+... + .+..++.|.....++++++
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 34678899999999999999 999999999999999888 7889888776543322 1 1122334455566677777
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccch-hhcccccc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE-VINSLLDL 214 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~-vi~~l~e~ 214 (383)
..+++|++|||+.+|+.+++++|+.+. +... .......++. +++++.++
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~--~~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAGIL-FRPP--ANVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCC--HHHHHhCCcccccCCHHHH
Confidence 778999999999999999999998654 3221 1111112333 67777765
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-16 Score=135.74 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=82.6
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChH------------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~------------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++||+.++|+.|+++|++++++||.+.. .+...+ +.+|+.. +.++++++....||+|+++..+++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 6899999999999999999999998763 355666 7788743 566666666678999999999999
Q ss_pred HcC--CCCCcEEEEecCh--------hhhHHHHhcCCEEEE
Q 016755 160 RLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA 190 (383)
Q Consensus 160 ~lg--~~p~e~l~VGDs~--------~Di~~a~~aG~~~i~ 190 (383)
++| +++++|+||||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999996 699999999998754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=131.70 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=80.9
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC--------------------CCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~--------------------~~~~k 148 (383)
..+++||+.++|+.|+++|++++++|++....++..+ +.+++..+|+.+++++. ...+.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 4689999999999999999999999999999999888 78899999999887543 22445
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
+|++.+..++++. ++++++|||+.+|+.+|+++++-
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 5777888776654 89999999999999999999763
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=128.61 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=137.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHH----HH-HHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLK----TF-LVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~----~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (383)
.+++++++||+|.||+.....+..+.+ ++ ..++|.+.+........-....-....-+...+...+..+..+
T Consensus 12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~--- 88 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHR--- 88 (244)
T ss_pred CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHH---
Confidence 457899999999999987554444443 43 3466766544332111100011111122333444444444433
Q ss_pred HHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC------CCCCChH
Q 016755 81 SMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPD 152 (383)
Q Consensus 81 ~~~~~~~--~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~------~~kp~p~ 152 (383)
...... ..++|.+-.+.+|-.|+.++ .++.||++..+..+.| +++|+.+.|+.+++.+-.. ..||.++
T Consensus 89 -~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~ 164 (244)
T KOG3109|consen 89 -FVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEE 164 (244)
T ss_pred -HhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHH
Confidence 333332 35788888999999998764 7899999999999999 8999999999998876443 5799999
Q ss_pred HHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 153 IFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 153 ~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+|..+.+..|++ |.+|++|.||.++|+.|++.|+.++++...... ..+++++.+..+.
T Consensus 165 afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~----~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 165 AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI----KGVDYALEQIHNN 223 (244)
T ss_pred HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc----cchHHHHHHhhch
Confidence 999999999998 999999999999999999999999998774321 1334555555543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.8e-16 Score=126.62 Aligned_cols=104 Identities=31% Similarity=0.471 Sum_probs=93.2
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC----------------CCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPS 150 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~----------------kp~ 150 (383)
.....++|++.++++.|+++|++++++|++....+...+ +..++..+++.+++....... ||+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 345689999999999999999999999999999999888 778888788888877665544 999
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
+..+..++++++..++++++|||+.+|+++++++|+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 99 PDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999999999999999999999999999999998764
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=126.82 Aligned_cols=161 Identities=17% Similarity=0.101 Sum_probs=105.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED---YGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++++|||||||++. .|.++..+.|... ............+..+.-+.. .|++ .+.+ .+
T Consensus 1 ~~la~FDlD~TLi~~------~w~~~~~~~g~~~--~~~~~~~~~~~~~~~~~r~~ll~~~g~~--~~~i--------~~ 62 (203)
T TIGR02137 1 MEIACLDLEGVLVPE------IWIAFAEKTGIDA--LKATTRDIPDYDVLMKQRLRILDEHGLK--LGDI--------QE 62 (203)
T ss_pred CeEEEEeCCcccHHH------HHHHHHHHcCCcH--HHHHhcCCcCHHHHHHHHHHHHHHCCCC--HHHH--------HH
Confidence 357999999999964 4667777777421 111111111222222222222 2333 2222 22
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE--------EEeCCCCCCCCCChHHHHHH
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~--------i~~~~~~~~~kp~p~~~~~~ 157 (383)
....++++||+.++++.+++.+ +++++|++...+++..+ +.+|+..+|.. .+.+... ..++.+......
T Consensus 63 ~~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~ 139 (203)
T TIGR02137 63 VIATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIA 139 (203)
T ss_pred HHHhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHH
Confidence 3345689999999999999975 99999999999999888 88999877752 2222222 234444444444
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+++.+. +|++|||+.||+.+++.+|+.++....
T Consensus 140 l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 140 FKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred HHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 456553 899999999999999999999887766
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.2e-15 Score=129.39 Aligned_cols=172 Identities=22% Similarity=0.293 Sum_probs=116.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCC---HHHHHHHHHHH-hCCCCCHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT---PLEEAAIIVED-YGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (383)
.++++++|||||||++. ..+..+.+..|............... ........... .+.+ .+..+.+.+.
T Consensus 3 ~~~~L~vFD~D~TLi~~-----~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~---~~~v~~~~~~ 74 (212)
T COG0560 3 RMKKLAVFDLDGTLINA-----ELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLP---VEVLEEVREE 74 (212)
T ss_pred CccceEEEecccchhhH-----HHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCC---HHHHHHHHHh
Confidence 46789999999999982 23344444445433222221111111 11222111111 1222 2222222221
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----------CCCCCCChH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPD 152 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----------~~~~kp~p~ 152 (383)
+ .+++||+.++++.+++.|++++++|+++..+++... +.+|+...+...+..++ ...++.+..
T Consensus 75 ~------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~ 147 (212)
T COG0560 75 F------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK 147 (212)
T ss_pred c------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence 1 789999999999999999999999999998888877 88999877766555444 113345788
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+..+++++|+++++++++|||.||+.|.+.+|.+++.-+.
T Consensus 148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 89999999999999999999999999999999998876655
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=127.08 Aligned_cols=179 Identities=17% Similarity=0.156 Sum_probs=116.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChh-------hhhhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-------EKHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~-------~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (383)
+++||+||||++.+..+ ..+...+.+.. ..... ....+.+ ....+....+....-...+.+++.....+
T Consensus 1 ~a~FD~DgTL~~~~s~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 78 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLF-IFLKFLASKNI-LFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEE 78 (202)
T ss_pred CeEEccCCCCCCCchHH-HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 37999999999875432 22333332221 11000 0111111 11222222222211122345555444444
Q ss_pred HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE-EEeCC----------CCCCCCCC
Q 016755 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSD----------EVRTGKPS 150 (383)
Q Consensus 82 ~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~-i~~~~----------~~~~~kp~ 150 (383)
.+.+.+ ...++|++.++++.++++|++++++|+++...++..+ +.+|+..+|.. +...+ ....++++
T Consensus 79 ~~~~~~-~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K 156 (202)
T TIGR01490 79 FVNQKI-ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGK 156 (202)
T ss_pred HHHHHH-HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHH
Confidence 444333 3468999999999999999999999999999999888 78888776654 22211 12345677
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
...++.++++.++++++|+++|||.+|+++++.+|..+++.+.
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 8889999999999999999999999999999999998876543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.2e-16 Score=144.05 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=90.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHH-HHHHhhcCCcccCcEEE---eCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIE-SKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~-~~l~~~~gl~~~f~~i~---~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++++.++++.|+++|. +.++||.+..... ..+ ...++..+|+.+. .++....+||+|.++..+++++|++|++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~-~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGS-RTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCC-cccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 46789999999998887 7899998764421 112 2345555555543 2344567999999999999999999999
Q ss_pred EEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----------cccchhhccccc
Q 016755 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----------TAADEVINSLLD 213 (383)
Q Consensus 168 ~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----------~~a~~vi~~l~e 213 (383)
|+||||++ .|+.+|+++|+.+++|.++....... ..|+++++++.+
T Consensus 222 ~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~ 278 (279)
T TIGR01452 222 TLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD 278 (279)
T ss_pred EEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence 99999996 99999999999999999875543221 246777777655
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-15 Score=139.37 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=96.1
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC---CCCCCChHHHHHHHHHcCCCCCcE
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---RTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~---~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.++++.+.++.|+..+++++++||.+..+....+ ..+|+..+|+.+...... ..+||+|.++..+++++|++|++|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence 3568888899999889999999998877655444 556777777766544332 248999999999999999999999
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCCccc----cccccchhhcccccc
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~----~~~~a~~vi~~l~e~ 214 (383)
+||||+. +|+.+|+++|+.+++|.++..... ....++++++++.++
T Consensus 200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred EEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999997 899999999999999988742211 123567788887764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=124.38 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=83.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCC-hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~-~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.++||+.++|+.|++.|++++++||++ ...+...+ +.+++..+ .+..||+|+++..+++++++++++|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~~l 112 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQVA 112 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 567899999999999999999999998 55555555 56665321 13479999999999999999999999
Q ss_pred EEecCh-hhhHHHHhcCCEEEEecCCCCccc
Q 016755 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (383)
Q Consensus 170 ~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~ 199 (383)
+|||+. .|+.+|+++|+.++++.++.....
T Consensus 113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred EECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 999998 799999999999999998765444
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.9e-14 Score=127.16 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=105.6
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhh-c-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-V-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
|+||+||||++.+... .. ++.++.+ ....+ ... . ..+..+.++..+.....+ . .+.+.+.+. .
T Consensus 2 ~~fDFDgTit~~d~~~-~~----~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~--~---~~~~~~~~~---~ 67 (214)
T TIGR03333 2 IICDFDGTITNNDNII-SI----MKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSS--L---KEEITSFVL---E 67 (214)
T ss_pred EEeccCCCCCcchhHH-HH----HHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCc--h---HHHHHHHHH---h
Confidence 7999999999875432 11 1122111 11111 111 1 223566666666554322 1 112222222 2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC---cEEEeCCCCCCCCCChHHH----------H
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------L 155 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f---~~i~~~~~~~~~kp~p~~~----------~ 155 (383)
...+.||+.++++.|+++|++++|+|++...+++..+ +.++....+ +.++.++.+...+|+|..+ .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 4689999999999999999999999999999999888 554433332 2344455556667877654 4
Q ss_pred HHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
.++++++..+++++||||+.+|+.+|+.+|+
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 6777888889999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.3e-15 Score=119.61 Aligned_cols=88 Identities=19% Similarity=0.166 Sum_probs=77.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcC-------CcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~-~~~~i~~~l~~~~g-------l~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
+++||+.++|+.|+++|++++++||+ ....+...+ +..+ +..+|+.++++++ +|+|+.+..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg 103 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN 103 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence 58899999999999999999999999 777777777 6667 7888898888764 589999999999999
Q ss_pred --CCCCcEEEEecChhhhHHHHh
Q 016755 163 --MEPSSSLVIEDSVIGVVAGKA 183 (383)
Q Consensus 163 --~~p~e~l~VGDs~~Di~~a~~ 183 (383)
++|++|+||||+..|+...++
T Consensus 104 ~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 104 GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-14 Score=122.01 Aligned_cols=95 Identities=21% Similarity=0.238 Sum_probs=78.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC------------CCCCCCCChHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPDIFLE 156 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~------------~~~~~kp~p~~~~~ 156 (383)
...+.||+.++++.++++|++++++|++...+++..+ +.+|+..+|...+..+ ....+..|+..+..
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 4668899999999999999999999999999999888 7788877665443322 12234556788999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
++++++++++++++|||+.+|+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 8999999999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.4e-14 Score=125.88 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=79.8
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC----hHHHHHHHHhhcCC--cccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~----~~~i~~~l~~~~gl--~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
...|+||+.++|+.|+++|++++++||.. ...+...+ +.+|+ .++|+.+++++.. .||++.. ++++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcC
Confidence 46789999999999999999999999964 33444444 67899 7888888888763 5676643 555666
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+ +++|||+.+|+.+|++||+.++.+.++..
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 5 99999999999999999999999988654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.9e-14 Score=133.11 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=86.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCC---------------ChHHHHHHHHhhcCCcccCcEEEe-----CCCCCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVG-----SDEVRTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~---------------~~~~i~~~l~~~~gl~~~f~~i~~-----~~~~~~~kp 149 (383)
..++||+.++|..|++.|++++|+||. +...+...+ +..++. |+.++. +++...+||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCcccCCCCCC
Confidence 579999999999999999999999995 233444455 566763 566543 356678999
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|+++..++++++++|++++||||+.+|+.+|+++|+.++++++.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 999999999999999999999999999999999999999999763
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=126.54 Aligned_cols=90 Identities=31% Similarity=0.430 Sum_probs=78.2
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.++.|++.++|+.|++.|++++++|+.......... +.+|+. +.++.+... +||.+.++..++++++.++++|+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccc-cccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEE
Confidence 468899999999999999999999998888887777 788883 344433333 89999999999999999999999
Q ss_pred EEecChhhhHHHHhcC
Q 016755 170 VIEDSVIGVVAGKAAG 185 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG 185 (383)
||||+.||+.|+++||
T Consensus 200 ~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 200 MVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEESSGGHHHHHHHSS
T ss_pred EEccCHHHHHHHHhCc
Confidence 9999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-14 Score=131.20 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=61.0
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhcccccc
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL 214 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l~e~ 214 (383)
....+||+|+++..+++++++++++|+||||+. +|+.+|+++|+.+++|.++....... ..++++++++.++
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 344689999999999999999999999999997 89999999999999999876543332 3567888888775
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=116.64 Aligned_cols=176 Identities=15% Similarity=0.126 Sum_probs=108.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHH-HHcCCCCCh-hhhhhhcCCCHHHHHHH-------HHH--HhCCCCCHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFL-VKYGKEWDG-REKHKIVGKTPLEEAAI-------IVE--DYGLPCAKHEFV 76 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~-~~~g~~~~~-~~~~~~~g~~~~~~~~~-------~~~--~~~~~~~~~~~~ 76 (383)
..|+++||+||||++.. ....+..++ ++.+..... .......|.+....... ++. ..+. +.+++
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~--~~~~~- 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGH--SEARL- 79 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCC--CHHHH-
Confidence 56799999999999443 334444444 777755332 44445555544332221 111 1132 23322
Q ss_pred HHHHHHHHhhh-ccCCCCchHHHHH-HHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-CC---------
Q 016755 77 NEVYSMFSDHL-CKVKALPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV--------- 144 (383)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~pg~~~lL-~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~~--------- 144 (383)
+.+.+.+.+.+ ....++||+.++| +.+++.|++++++|+++..+++..+ ..+|+.. .+.++++. +.
T Consensus 80 ~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~ 157 (211)
T PRK11590 80 QALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTL 157 (211)
T ss_pred HHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCc
Confidence 22222333322 2257799999999 5688899999999999999999888 6666422 23444432 11
Q ss_pred -CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 -RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 -~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..|..|...++. .++.+...+.+.|||.+|+.+.+.+|-+.++-+.
T Consensus 158 ~c~g~~K~~~l~~---~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 158 RCLGHEKVAQLER---KIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred cCCChHHHHHHHH---HhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 122223333333 3466778899999999999999999998766544
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-14 Score=120.84 Aligned_cols=84 Identities=11% Similarity=0.184 Sum_probs=74.5
Q ss_pred HHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 016755 100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (383)
Q Consensus 100 L~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~ 179 (383)
+..|+++|++++++|+.+...+...+ +.+|+..+|+. .||+|+.++.+++++++++++|++|||+.||+.
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLS 112 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHH
Confidence 56677889999999999999999988 88999877653 279999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecC
Q 016755 180 AGKAAGMEVVAVPS 193 (383)
Q Consensus 180 ~a~~aG~~~i~v~~ 193 (383)
+++.+|+.+++-+.
T Consensus 113 ~~~~ag~~~am~nA 126 (169)
T TIGR02726 113 MMKRVGLAVAVGDA 126 (169)
T ss_pred HHHHCCCeEECcCc
Confidence 99999998776543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.1e-14 Score=128.98 Aligned_cols=77 Identities=27% Similarity=0.400 Sum_probs=61.2
Q ss_pred EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhccc
Q 016755 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSL 211 (383)
Q Consensus 137 ~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l 211 (383)
...+.+....+||+|.+++.++++++++++++++|||++ +|+.+|+++|+++++|.++....... ..++.+++++
T Consensus 167 ~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l 246 (249)
T TIGR01457 167 VATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSL 246 (249)
T ss_pred HHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCCh
Confidence 344555666889999999999999999999999999997 89999999999999999875433221 2456666665
Q ss_pred cc
Q 016755 212 LD 213 (383)
Q Consensus 212 ~e 213 (383)
.+
T Consensus 247 ~~ 248 (249)
T TIGR01457 247 AE 248 (249)
T ss_pred hh
Confidence 44
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.47 E-value=9e-14 Score=117.28 Aligned_cols=84 Identities=18% Similarity=0.240 Sum_probs=73.9
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
++++|+++|++++++||.+...+...+ +.+|+..+|+. .+|+|+.+..+++++|+++++|++|||+.+|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~ 105 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDW 105 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 689999999999999999999888888 88888655442 37899999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecC
Q 016755 179 VAGKAAGMEVVAVPS 193 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~ 193 (383)
.+++.+|+. +.+..
T Consensus 106 ~~~~~ag~~-~~v~~ 119 (154)
T TIGR01670 106 PVMEKVGLS-VAVAD 119 (154)
T ss_pred HHHHHCCCe-EecCC
Confidence 999999997 45544
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.7e-13 Score=109.34 Aligned_cols=97 Identities=24% Similarity=0.389 Sum_probs=82.8
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VG 172 (383)
-|.+.+-+.++++.|+++.++||+.+.-+.... +.+|+ +.+. ..+||-+..+..+++++++++++|+|||
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 344566678889999999999999998888777 77876 4443 4689999999999999999999999999
Q ss_pred cCh-hhhHHHHhcCCEEEEecCCCCccc
Q 016755 173 DSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (383)
Q Consensus 173 Ds~-~Di~~a~~aG~~~i~v~~~~~~~~ 199 (383)
|.. +|+.++..+|+++|.|.+....+.
T Consensus 118 DqL~TDVlggnr~G~~tIlV~Pl~~~d~ 145 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEPLVAPDG 145 (175)
T ss_pred chhhhhhhcccccCcEEEEEEEeccccc
Confidence 999 899999999999999988644333
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.5e-14 Score=132.93 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=76.1
Q ss_pred CEEEEeCCChHH-HHHHHHhhcCCcccCcEEEeCCCCC---CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHh
Q 016755 109 PMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKA 183 (383)
Q Consensus 109 ~~~i~s~~~~~~-i~~~l~~~~gl~~~f~~i~~~~~~~---~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~ 183 (383)
.+.++||.+..+ ....+ ..+|...+|+.+....... .+||+|.++..+++++++++++++||||++ +|+.+|++
T Consensus 188 ~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~ 266 (311)
T PLN02645 188 CLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN 266 (311)
T ss_pred CEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence 466777766533 22222 3345555566555444322 479999999999999999999999999998 99999999
Q ss_pred cCCEEEEecCCCCccccc------cccchhhcccccc
Q 016755 184 AGMEVVAVPSLPKQTHRY------TAADEVINSLLDL 214 (383)
Q Consensus 184 aG~~~i~v~~~~~~~~~~------~~a~~vi~~l~e~ 214 (383)
+|+.+++|.++....... ..++.+++++.++
T Consensus 267 aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 267 GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 999999998875433221 3467888888775
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.7e-13 Score=114.89 Aligned_cols=81 Identities=17% Similarity=0.280 Sum_probs=70.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
.++.|+++|++++++|+.+...+...+ +.+|+..+|+ + .+++++.++.+++++|+++++|+||||+.+|+
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 456667789999999999999888888 7788865553 2 35678999999999999999999999999999
Q ss_pred HHHHhcCCEEE
Q 016755 179 VAGKAAGMEVV 189 (383)
Q Consensus 179 ~~a~~aG~~~i 189 (383)
.+++++|+.++
T Consensus 126 ~~a~~aG~~~~ 136 (183)
T PRK09484 126 PVMEKVGLSVA 136 (183)
T ss_pred HHHHHCCCeEe
Confidence 99999999854
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-12 Score=120.48 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=94.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCC-------CCCCCCCChHHHHHHHHHc
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~-------~~~~~kp~p~~~~~~~~~l 161 (383)
..++|++.++++.|+++|++++++|+.+.......+ +.+++.. +|+.+++.+ +...+||+|+.+..+++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 468899999999999999999999999999888888 7788886 899988887 4556899999999999999
Q ss_pred CC-CCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 162 NM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 162 g~-~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+. ++++|++|||+.+|+.+|+++|+.+++|.++
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98 6799999999999999999999999999875
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=112.13 Aligned_cols=210 Identities=19% Similarity=0.220 Sum_probs=119.3
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHH--HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH---
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKT--FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV--- 79 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~--~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 79 (383)
.++++++++||+||||++....+..+... .+++.|.++- .+...-..+.....+.+....+.+.+++.+...-
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~i--flTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at 81 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVI--FLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT 81 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEE--EEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH
Confidence 45678999999999999987666554333 2345554431 2222223333334444444356655555544322
Q ss_pred HHHHHhhhccCCCC-chHHHHHHHHHHCCCCEEEEeCC-----------Ch---HHHHHHH-HhhcCCccc---CcEEE-
Q 016755 80 YSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMALASNS-----------HR---ATIESKI-SYQHGWNES---FSVIV- 139 (383)
Q Consensus 80 ~~~~~~~~~~~~~~-pg~~~lL~~L~~~G~~~~i~s~~-----------~~---~~i~~~l-~~~~gl~~~---f~~i~- 139 (383)
...+.+.....+.+ =|...+.+.|+..|+.+.--.+. .. +.....+ .-..|..-. -|.++
T Consensus 82 ~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p 161 (269)
T COG0647 82 ADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVP 161 (269)
T ss_pred HHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCcccc
Confidence 22222222212222 25555566666666433221111 10 1111111 001111000 01111
Q ss_pred -------------------eCCC-CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcc
Q 016755 140 -------------------GSDE-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT 198 (383)
Q Consensus 140 -------------------~~~~-~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~ 198 (383)
++.+ ...|||.+.++..++++++.++++++||||++ +||.+|+++|+.++.|..|....
T Consensus 162 ~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~ 241 (269)
T COG0647 162 TERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSA 241 (269)
T ss_pred CCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCCh
Confidence 1112 24789999999999999999999999999999 79999999999999999986533
Q ss_pred cc----ccccchhhccccccCc
Q 016755 199 HR----YTAADEVINSLLDLRP 216 (383)
Q Consensus 199 ~~----~~~a~~vi~~l~e~~~ 216 (383)
.. ...++++++++.++..
T Consensus 242 ~~~~~~~~~p~~v~~sl~~~~~ 263 (269)
T COG0647 242 EDLDRAEVKPTYVVDSLAELIT 263 (269)
T ss_pred hhhhhhccCCcchHhhHHHHHh
Confidence 32 2356888888887543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-12 Score=109.15 Aligned_cols=96 Identities=16% Similarity=0.075 Sum_probs=86.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++|++|+ ++++++++|++...+++..+ +.+++.. +|+.+++++++..+||+ +.++++++|.+|++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~ 117 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN 117 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence 4578999999999998 57999999999999999888 7788854 56999999999999987 88899999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
|++|||+++|+.++.++|+.+-
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EEEEECCHHHhhcCccCEEEec
Confidence 9999999999999999988543
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.9e-12 Score=120.30 Aligned_cols=90 Identities=22% Similarity=0.152 Sum_probs=81.8
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh----cCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~----~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
++||+.++|+.|+++|+.++++|+++...+...+ +. +++.++|+.+.++ .||+|+.++.+++++|+.+++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~ 105 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS 105 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence 5789999999999999999999999999999888 66 7888888887655 589999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCE
Q 016755 168 SLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~ 187 (383)
++||||++.|+.++++++-.
T Consensus 106 ~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 106 FLFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEEECCCHHHHHHHHHHCCC
Confidence 99999999999999998764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.8e-12 Score=117.36 Aligned_cols=49 Identities=29% Similarity=0.537 Sum_probs=45.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCcE-EEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~-l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.+||+|.++..++++++++++++ +||||++ +|+.+|+++|+.+++|.++
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 67999999999999999999887 9999999 8999999999999998653
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.7e-11 Score=116.79 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..++.||+.+++++++++|++++++|++++..++..+ +++|+ |+.++++++....||++... .+.+.++ .+++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~--~~~~ 142 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKAA-ALVEAFG--ERGF 142 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHHH-HHHHHhC--ccCe
Confidence 3567899999999999999999999999999999888 77887 79999998877676655432 2334554 3668
Q ss_pred EEEecChhhhHHHHhcCCEEEEecC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+++||+.+|+.+++.+|- .+.|+.
T Consensus 143 ~yvGDS~~Dlp~~~~A~~-av~Vn~ 166 (479)
T PRK08238 143 DYAGNSAADLPVWAAARR-AIVVGA 166 (479)
T ss_pred eEecCCHHHHHHHHhCCC-eEEECC
Confidence 999999999999999995 445554
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-10 Score=106.18 Aligned_cols=105 Identities=19% Similarity=0.207 Sum_probs=86.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc-C-------CcccCcEEEeCCCCC---------------
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEVR--------------- 145 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~-g-------l~~~f~~i~~~~~~~--------------- 145 (383)
.+.+.||+.++|+.|+++|++++++||++..+++..+ +.+ | +.++|+.|+++..-+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3677999999999999999999999999999999888 554 6 899999999875311
Q ss_pred --CCCC------------ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEecCC
Q 016755 146 --TGKP------------SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL 194 (383)
Q Consensus 146 --~~kp------------~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~~~ 194 (383)
..++ ...-.....+.+|+.+++++||||++ .|+..++ .+||.+++|.+.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 0011 11336667888999999999999999 7999998 999999988773
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.2e-11 Score=114.39 Aligned_cols=117 Identities=14% Similarity=0.047 Sum_probs=72.0
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCCh-----HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHR-----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~-----~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
++++.+++..++..+..+.++++.+. ...+... +.+++...+...-.-+-...+..++.+++.+++++|+++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e 217 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE-HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN 217 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh-hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 45667777777766666777776542 2222222 33443210000000122234555788999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
|++|||+.||++|++.+|+.+++ ++..+.....|+.++.+-.+
T Consensus 218 ~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 218 VVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred eEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecCCC
Confidence 99999999999999999985433 33333333455666655443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-10 Score=105.25 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=81.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEE------EeCCCCCCCCCCh---------HH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DI 153 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i------~~~~~~~~~kp~p---------~~ 153 (383)
.+.+.||+.++++.|+++|++++|+|++....++..+ +.+|+...+..+ +..+....|+|.| ..
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 6889999999999999999999999999999999999 778887666666 4445555677777 67
Q ss_pred HHHHHHHcC--CCCCcEEEEecChhhhHHHHhc
Q 016755 154 FLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 154 ~~~~~~~lg--~~p~e~l~VGDs~~Di~~a~~a 184 (383)
++.+++.++ .++++|++|||+.+|+.||...
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 777888898 8999999999999999998776
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-10 Score=102.54 Aligned_cols=169 Identities=17% Similarity=0.171 Sum_probs=111.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhhc
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLC 88 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (383)
+|+||+|+||+|.+... .+++.++.......+. .+......+....++..+... .+.++ +.+.+.
T Consensus 2 LvvfDFD~TIvd~dsd~-----~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~--------I~~~l~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDD-----WVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPED--------IRDALR 68 (234)
T ss_pred EEEEeCCCCccCCccHH-----HHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHH--------HHHHHH
Confidence 58999999999875332 2233444433222222 222122334444444443211 22222 233445
Q ss_pred cCCCCchHHHHHHHH--HHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC-----------------CCCCC
Q 016755 89 KVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV-----------------RTGKP 149 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L--~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~-----------------~~~kp 149 (383)
.+++.||..++++.+ +..|+.+.|+|.+..-+++.+| +..|+...|+.|++..-. ...-|
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 788999999999999 4579999999999999999999 889999999888764210 01011
Q ss_pred ---ChHHHHHHHHH---cCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 150 ---SPDIFLEAAKR---LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 150 ---~p~~~~~~~~~---lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|...+...++. -|+.-.+++||||+.||+.++.+.+-.=+++++
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 45566666665 367789999999999999999988776555555
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=122.18 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=79.7
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCCh------------HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~------------~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++||+.+.|+.|++.|++++|+||... ..+...+ +.+|+. |+.+++..+..+.||+|+++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 689999999999999999999999776 3455666 677774 7888888888889999999999999
Q ss_pred HcC----CCCCcEEEEecChhhhHHHHhcCC
Q 016755 160 RLN----MEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
+++ +++++++||||+..|+.+++++|.
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999999888777765
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.7e-10 Score=101.00 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=70.0
Q ss_pred cCCCCchHHHHHH-HHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-CC---C-------CCCCChHHHHH
Q 016755 89 KVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV---R-------TGKPSPDIFLE 156 (383)
Q Consensus 89 ~~~~~pg~~~lL~-~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~~---~-------~~kp~p~~~~~ 156 (383)
...++||+.++|+ .++++|++++|+|+++...++... +..++..- +.++++. ++ + .|..|...++.
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~ 169 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ 169 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence 3468999999996 788899999999999999888777 55443221 3344332 11 1 12223333433
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.++.+...+.+.|||.+|+.+.+.+|.+.++-+.
T Consensus 170 ---~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 170 ---KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred ---HhCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 3455667889999999999999999998866544
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.7e-11 Score=90.19 Aligned_cols=68 Identities=32% Similarity=0.496 Sum_probs=60.3
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCcccc----ccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~a~~vi~~l~e 213 (383)
++||+|.++..+++++++++++|++|||+ ..|+.+|+++|+.+++|.++...... ...+++++++|.|
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 58999999999999999999999999999 79999999999999999997655433 2477889988876
|
... |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.4e-10 Score=91.93 Aligned_cols=104 Identities=17% Similarity=0.175 Sum_probs=83.1
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHH--HhhcCCcccCcEEEeCCCCCC-CCCChHHHHHHHHHcCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI--SYQHGWNESFSVIVGSDEVRT-GKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l--~~~~gl~~~f~~i~~~~~~~~-~kp~p~~~~~~~~~lg~~p 165 (383)
...++|++.+.+++.++.|++++|.|.+.-....-.+ .....+..+|+..+-. .. .|-...-|..+++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt---tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT---TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec---cccccccchhHHHHHHhcCCCc
Confidence 5679999999999999999999999998876555444 1233455556655433 32 3556778999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
.+++++.|.+..+.+|+.+|+.++.+.+..
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~g 207 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVRPG 207 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeecCC
Confidence 999999999999999999999999887743
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.2e-10 Score=104.15 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=55.4
Q ss_pred CCCCCChHHHHHHHHHc--------CC-----CCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc---ccccchh
Q 016755 145 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR---YTAADEV 207 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~l--------g~-----~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~---~~~a~~v 207 (383)
..|||++.+|..+++.+ +. ++++++||||++ +|+.+|+++|+.+++|.++...... ...++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 36999999999998887 43 457999999999 8999999999999999887332221 2246788
Q ss_pred hcccccc
Q 016755 208 INSLLDL 214 (383)
Q Consensus 208 i~~l~e~ 214 (383)
++++.++
T Consensus 310 v~~l~e~ 316 (321)
T TIGR01456 310 VNDVFDA 316 (321)
T ss_pred ECCHHHH
Confidence 8888764
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.9e-10 Score=93.23 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=99.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
..++|+||+|-|++..+. +.+++...|..-...... +.++. ..++.+..-+..+.. ...++ ....
T Consensus 15 ~~~aVcFDvDSTvi~eEg-----IdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp--~~~qv----~~~v- 82 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEG-----IDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQP--LQVQV----EQFV- 82 (227)
T ss_pred hcCeEEEecCcchhHHhh-----HHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcc--cHHHH----HHHH-
Confidence 468999999999986543 333333445433322222 22221 233333332222211 11111 1111
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCc--------EEEeCCCC----CCCCCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFS--------VIVGSDEV----RTGKPS 150 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~--------~i~~~~~~----~~~kp~ 150 (383)
.....++.||++++...|+++|..++++|++...++..+- ..+|+.. .+. .-+.+.+. ..+-.+
T Consensus 83 -~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK 160 (227)
T KOG1615|consen 83 -IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK 160 (227)
T ss_pred -hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCcc
Confidence 1135788999999999999999999999999999988776 6777753 221 11222221 133456
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHh
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~ 183 (383)
++.+..+.+ +.+-..++||||+.+|++|...
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 778877766 8888999999999999999877
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.7e-11 Score=106.23 Aligned_cols=63 Identities=21% Similarity=0.189 Sum_probs=48.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
..+..|+.+++.+++++|++++++++|||+.||+.|++.+|+.+++-+. .+.....++++..+
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na---~~~vk~~a~~v~~~ 215 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA---DEELKEAADYVTEK 215 (230)
T ss_pred eCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc---cHHHHHhcceEecC
Confidence 3566789999999999999999999999999999999999997755432 22333344555543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.03 E-value=2e-10 Score=104.45 Aligned_cols=98 Identities=23% Similarity=0.388 Sum_probs=81.4
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEE--EeCCCCCCCCCChHHHHHHHHHcCCC-CCcEE
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL 169 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i--~~~~~~~~~kp~p~~~~~~~~~lg~~-p~e~l 169 (383)
++++.++++.+.++|+++ ++||.+..+....+ ..++...+|..+ ++++....+||+|.++..++++++.. +++|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 689999999998899997 88998877665444 566666666654 56666568999999999999999975 67899
Q ss_pred EEecCh-hhhHHHHhcCCEEEEec
Q 016755 170 VIEDSV-IGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 170 ~VGDs~-~Di~~a~~aG~~~i~v~ 192 (383)
||||+. +|+.+|+++|+.+++|.
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEe
Confidence 999995 99999999999999875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.5e-09 Score=91.98 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=71.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh-HHHHHHHHhhcCCc----------ccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR-ATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~-~~i~~~l~~~~gl~----------~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
.+.++|++.++|++|+++|++++++|.++. +.....| +.+++. .+|+..-... + .+..-|+.+
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~i 116 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRRI 116 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEESS----S--HHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhheec----C-chHHHHHHH
Confidence 578999999999999999999999996654 4566666 788888 6666643332 2 677899999
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
.+..|++.+++++|.|...++....+.|+.++.++.|-.
T Consensus 117 ~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 117 HRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 999999999999999999999999999999999998643
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.6e-09 Score=92.33 Aligned_cols=85 Identities=21% Similarity=0.386 Sum_probs=63.3
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC----------C---CChHHHHHH---
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA--- 157 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~----------k---p~p~~~~~~--- 157 (383)
|++.++++.++++|++++|+|.++...++..+ +.+|+... .+++..-...+ . .|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDD--NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEG--GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCce--EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 66669999999999999999999999999888 77887542 13322221000 0 256666666
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHH
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGK 182 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~ 182 (383)
... +.+...+++||||.+|+.+++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 444 889999999999999999975
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.9e-10 Score=102.05 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=61.3
Q ss_pred EEEEeCCChHHHHHHHHhhcCCcccCcEE---EeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 110 MALASNSHRATIESKISYQHGWNESFSVI---VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 110 ~~i~s~~~~~~i~~~l~~~~gl~~~f~~i---~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
..+.+....+.+...+ +.++... ... ...+-...+.+|+.++..+++++|++++++++|||+.||+.|++.+|+
T Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 110 VKMRYGIDVDTVREII-KELGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred EEEeecCCHHHHHHHH-HhcCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCc
Confidence 3444444555555555 5554321 111 111223456788899999999999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccchhhcc
Q 016755 187 EVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 187 ~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
.+++-+. .+.....++.+..+
T Consensus 187 ~vam~Na---~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 187 GVAVANA---QPELKEWADYVTES 207 (225)
T ss_pred eEEcCCh---hHHHHHhcCeecCC
Confidence 7654432 23333344555543
|
catalyze the same reaction as SPP. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.2e-10 Score=93.40 Aligned_cols=68 Identities=26% Similarity=0.401 Sum_probs=56.9
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChh-hhHHHHhcCCEEEEecCCCCccc---c-ccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTH---R-YTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~-Di~~a~~aG~~~i~v~~~~~~~~---~-~~~a~~vi~~l~e 213 (383)
.|||.|..|+.+++.+|++|++++||||..+ |+-.|++.||+.+.|.++...+. . ...|+...+++.+
T Consensus 179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~ 251 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFAD 251 (262)
T ss_pred ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHH
Confidence 6899999999999999999999999999995 89999999999999999754431 1 2345666776665
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.3e-09 Score=88.57 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=82.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEEeCC-----CCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVGSD-----EVRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~~~~-----~~~~~k 148 (383)
.+.+.||+.+.+..|.+.||+++++||.. ...+...+ ...|. .|+.++... .+.++|
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcccC
Confidence 34688999999999999999999999952 12222333 33343 456666542 256889
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
|+|.++..+++++++++++.++|||...|+++|.++|+..+.+.++
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 9999999999999999999999999999999999999997777664
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.6e-09 Score=97.14 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=75.2
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHH--HHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~--~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|++|+++|++++++||+++.... ..+ +.+|+.. +|+.|+++.+... ..+..++++++.++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~ 97 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGI 97 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCce
Confidence 46899999999999999999999999887655 566 7889987 8999998876542 4677777888999999
Q ss_pred EEEEecChhhhHHHHhcCC
Q 016755 168 SLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~ 186 (383)
|++|||+..|+......|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999999887766554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=87.78 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=82.1
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---------------HHHHHHhhcCCcccCcEEEeCCC-----------CC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---------------IESKISYQHGWNESFSVIVGSDE-----------VR 145 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---------------i~~~l~~~~gl~~~f~~i~~~~~-----------~~ 145 (383)
+.|....++.+|++.|++++|+|-+++.. ++..+ +..+..-..+.+++... .+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 67889999999999999999999987744 45555 44444433344554322 24
Q ss_pred CCCCChHH--H--HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~--~--~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..||+|+. | +.++++.|+.|++|++|+|+..++++|++.|+.++.+..
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 66999999 8 999999999999999999999999999999999999876
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-08 Score=89.43 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=66.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccc-CcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~-f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...++||+.++++.|+++|++++++|+..... +...+ +.+|+... ++.++...+ .++++.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE-
Confidence 56789999999999999999999999987443 34556 67888653 466766643 35677888887777666
Q ss_pred CCcEEEEecChhhhHHH
Q 016755 165 PSSSLVIEDSVIGVVAG 181 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a 181 (383)
+++|||..+|+...
T Consensus 191 ---vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ---VLLFGDNLLDFDDF 204 (266)
T ss_pred ---EEEECCCHHHhhhh
Confidence 99999999999653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.7e-08 Score=80.30 Aligned_cols=156 Identities=17% Similarity=0.199 Sum_probs=96.3
Q ss_pred EEEEecCCcccc--cHHHHHHHHHHHHHHcCCCCChhhhhhhc--CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 11 CVILDLDGTLLN--TDGMFSEVLKTFLVKYGKEWDGREKHKIV--GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 11 ~viFDlDGTL~d--~~~~~~~a~~~~~~~~g~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
.|+.|+|||+.- +...+.. .+|.+--.......+ ..+.++.+.+++...+.+ .+++. .-.
T Consensus 5 vi~sDFDGTITl~Ds~~~itd-------tf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s--~~Eil-------e~l 68 (220)
T COG4359 5 VIFSDFDGTITLNDSNDYITD-------TFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSS--LEEIL-------EFL 68 (220)
T ss_pred EEEecCCCceEecchhHHHHh-------ccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCC--HHHHH-------HHH
Confidence 356699999983 3322222 233221111221111 225566666666665544 22222 222
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc------cC----------cEEEeCCCCCCCCCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE------SF----------SVIVGSDEVRTGKPS 150 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~------~f----------~~i~~~~~~~~~kp~ 150 (383)
...+.+.||..+++++++++++++.++|.+-..++..++....|-.. ++ ..++..++-.+|.-+
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 23578999999999999999999999999999999988833222111 11 123333444566556
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
+..++. +.-+++.++|.||+..|+.+|+....
T Consensus 149 ~~vI~~----l~e~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 149 SSVIHE----LSEPNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred chhHHH----hhcCCceEEEecCCcccccHhhhhhh
Confidence 555554 34466779999999999999988755
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.2e-09 Score=93.11 Aligned_cols=70 Identities=27% Similarity=0.367 Sum_probs=57.6
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc--------ccccchhhcccccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR--------YTAADEVINSLLDL 214 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~--------~~~a~~vi~~l~e~ 214 (383)
-.|||.+.++..++++.+++|++|+||||+. .||..+++.|++++++-.+....+. .-.|+++++++.++
T Consensus 221 v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 221 VLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred ecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 3789999999999999999999999999999 6999999999999999887542211 22467777777664
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=86.53 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=65.5
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCC---h-----------HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~---~-----------~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
.|++.+.|++|.+.||.++|+||.. . ..+...+ +.+++. +...++...-.++||.+.++..++
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 3579999999999999999999962 1 1122233 455554 234444444478999999999999
Q ss_pred HHcCC----CCCcEEEEecC-----------hhhhHHHHhcCCEE
Q 016755 159 KRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEV 188 (383)
Q Consensus 159 ~~lg~----~p~e~l~VGDs-----------~~Di~~a~~aG~~~ 188 (383)
+.++. +.++++||||. -.|...|.++|++.
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 98874 89999999996 57899999999975
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.1e-09 Score=91.77 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=62.0
Q ss_pred EEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 111 ~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+.+......+...+ +..++..+... ..-+-...+..+..+++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 111 ~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 111 IMREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred EecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 344554555556566 44554322110 0111123456678899999999999999999999999999999999997665
Q ss_pred ecCCCCccccccccchhhccc
Q 016755 191 VPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 191 v~~~~~~~~~~~~a~~vi~~l 211 (383)
-+. .+.....++++..+-
T Consensus 189 ~na---~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 189 ANA---DDQLKEIADYVTSNP 206 (215)
T ss_pred CCc---cHHHHHhCCEEcCCC
Confidence 533 333334455555543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=5e-08 Score=90.31 Aligned_cols=47 Identities=15% Similarity=0.066 Sum_probs=41.8
Q ss_pred CCCCChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+ .+...++.+++++|+++ +++++|||+.||+.|++.+|+.+++-+.
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 44 56778999999999999 9999999999999999999998877654
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.3e-08 Score=81.33 Aligned_cols=87 Identities=25% Similarity=0.287 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCC--CEEEEeCCC-------hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC----
Q 016755 97 NRLIKHLSCHGV--PMALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM---- 163 (383)
Q Consensus 97 ~~lL~~L~~~G~--~~~i~s~~~-------~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~---- 163 (383)
.+.++++++.+. +++|+||+. ...++. +.+.+|+ ..+.. ...|| ..+..+++.++.
T Consensus 65 ~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~-~~~~lgI----pvl~h----~~kKP--~~~~~i~~~~~~~~~~ 133 (168)
T PF09419_consen 65 AEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA-LEKALGI----PVLRH----RAKKP--GCFREILKYFKCQKVV 133 (168)
T ss_pred HHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH-HHHhhCC----cEEEe----CCCCC--ccHHHHHHHHhhccCC
Confidence 344555556554 499999984 333333 3366665 22221 13455 666667666654
Q ss_pred -CCCcEEEEecCh-hhhHHHHhcCCEEEEecCC
Q 016755 164 -EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 164 -~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~ 194 (383)
.|+++++|||.. +|+.+|..+|+.++++..+
T Consensus 134 ~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 134 TSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 499999999999 8999999999999999875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-08 Score=83.13 Aligned_cols=84 Identities=19% Similarity=0.305 Sum_probs=70.3
Q ss_pred HHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 016755 100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (383)
Q Consensus 100 L~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~ 179 (383)
++.|.+.|++++|+|+.....++... +.+|+. +++-|. +.+-..+.++++++++.+++|.|+||..+|+.
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI~----~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp 113 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRA-KDLGIK----HLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP 113 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCCc----eeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence 45566789999999999999999888 788984 444332 34568999999999999999999999999999
Q ss_pred HHHhcCCEEEEecC
Q 016755 180 AGKAAGMEVVAVPS 193 (383)
Q Consensus 180 ~a~~aG~~~i~v~~ 193 (383)
..++.|.+++..+.
T Consensus 114 vm~~vGls~a~~dA 127 (170)
T COG1778 114 VMEKVGLSVAVADA 127 (170)
T ss_pred HHHHcCCccccccc
Confidence 99999998765443
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-08 Score=93.03 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=43.0
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..+..|..+++.+++++|++++++++|||+.||++|.+.+|..+++-+.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na 233 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA 233 (264)
T ss_pred cCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence 3566788999999999999999999999999999999999997665443
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.5e-07 Score=80.90 Aligned_cols=172 Identities=16% Similarity=0.104 Sum_probs=103.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
+-.+++||+|-|++|.+.. ..+...++.......+.. +-.....+...++++.++-. ...++ ...
T Consensus 12 ~ril~~FDFD~TIid~dSD-----~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~--------ik~ 78 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD-----NWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAE--------IKQ 78 (256)
T ss_pred CcEEEEEecCceeecCCcc-----hHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHH--------HHH
Confidence 3447899999999987422 112223332222112211 11112333444444444321 12222 223
Q ss_pred hhccCCCCchHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------CC-------
Q 016755 86 HLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------TG------- 147 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~-~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------~~------- 147 (383)
.+..++..||+.++++.+++.|. .+.|+|.+..-|++.+| +.+|+.+.|..|++..... +-
T Consensus 79 ~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 79 VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCc
Confidence 34467899999999999999984 99999999999999999 8899999888777542110 00
Q ss_pred CC----ChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 148 KP----SPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 148 kp----~p~~~~~~~~---~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
=| +...+.+... +-|+.-++.+||||+.||+.+.......-++.++
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 01 2223333322 3467788999999999998776555443333333
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.8e-07 Score=82.45 Aligned_cols=45 Identities=13% Similarity=-0.017 Sum_probs=39.9
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+-.++.+++.+++++|+++++|++|||+.||+.|.+.+|..+++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 344467789999999999999999999999999999999997754
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-08 Score=94.92 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=41.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-
T Consensus 184 ~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~ 230 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG 230 (272)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc
Confidence 35566889999999999999999999999999999999999966544
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.6e-08 Score=88.47 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=54.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHH
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~ 154 (383)
||+.++|++|+++|++++++|++.++.+...+ +.+|+..+|+.++++++....||+|+..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence 78899999999999999999999999999888 8899999999999999998888887543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=87.63 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=51.2
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+ ..+.....|+++..+-.
T Consensus 192 ~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N---A~~~vK~~A~~vt~~n~ 256 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN---AIPSVKEVAQFVTKSNL 256 (270)
T ss_pred CCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC---ccHHHHHhcCeeccCCC
Confidence 456778899999999999999999999999999999999999665543 33444445566665543
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-07 Score=86.77 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=42.5
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+
T Consensus 186 ~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N 233 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN 233 (266)
T ss_pred cCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence 356668899999999999999999999999999999999999665543
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-07 Score=84.07 Aligned_cols=48 Identities=15% Similarity=-0.026 Sum_probs=43.2
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-...+.+|+.+++.+++++|++++++++|||+.||+.|++.+|..+++
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 345678999999999999999999999999999999999999987654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.7e-08 Score=88.62 Aligned_cols=48 Identities=8% Similarity=-0.084 Sum_probs=43.2
Q ss_pred CCCCCChHHHHHHHHHcCC---CCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~---~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.+++-+
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~ 233 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKG 233 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence 4567788999999999999 99999999999999999999999777654
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.4e-08 Score=83.19 Aligned_cols=100 Identities=8% Similarity=0.055 Sum_probs=86.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.+...||+.++|+.|.+. +.++|.|++.+.+++..+ +.++... +|+.+++.+++...+|+ +.+.+..+|.++++
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK 114 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence 356789999999999987 999999999999999988 7788765 88999998887766665 66778889999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|++|||++.++.++.++|+.+.....
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCCC
Confidence 99999999999999999987665553
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=95.60 Aligned_cols=106 Identities=21% Similarity=0.225 Sum_probs=77.7
Q ss_pred cCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++++.|+++| ++++++|+.+...++..+ +.+|+..+|..+ .|+.-..++++++..+++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-----------~p~~K~~~v~~l~~~~~~ 449 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAEL-----------LPEDKLAIVKELQEEGGV 449 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccC-----------CHHHHHHHHHHHHHcCCE
Confidence 3679999999999999999 999999999999888888 889996655432 112223455555557789
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
|+||||+.||+.+++++|+ .+.++...+.....++.++.
T Consensus 450 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 450 VAMVGDGINDAPALAAADV---GIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEECChhHHHHHhhCCE---eEEeCCCCHHHHHhCCEEEe
Confidence 9999999999999999995 44443222222234555554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-07 Score=81.62 Aligned_cols=166 Identities=16% Similarity=0.241 Sum_probs=88.5
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCC--CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH--hhh
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS--DHL 87 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 87 (383)
|.+||||||.|....+...+.+ .++.. ++.+.... .-..+.+ .... .+....+...+. ..+
T Consensus 5 I~iDiDgVLad~~~~~~~~~n~---~~~~~~~~~~~~~~~---~~~~~~~----g~~~-----~e~~~~~~~~~~~~~~f 69 (191)
T PF06941_consen 5 IAIDIDGVLADFNSAFIEWFNE---EFGKNPELTPEDITG---YWDWEKW----GITE-----PEFYEKLWRFYEEPGFF 69 (191)
T ss_dssp EEEESBTTTB-HHHHHHHHHHH---HTTTS----GGGGTS---SSHHHHH----HHHS-----TTHHHHHHHHHTSTTTT
T ss_pred EEEECCCCCcccHHHHHHHHHH---HcCCCCCCCHHHhhh---hhHHHHh----CCCC-----HHHHHHHHHHHhChhhh
Confidence 8899999999997665554443 45555 43333221 1111111 0000 111222222222 234
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChH-------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~-------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
...+|.||+.++|+.|.+.|+.+.++|..+.. ...+.+.+++|...+-+.+++++ |. .
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~----------~ 134 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT----------L 134 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG----------G
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC----------e
Confidence 67899999999999999999777777776543 23345545555333324444432 21 1
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++. -++|+|++..+..+...|+++++++..+..... .-.++.++.|+
T Consensus 135 v~~----DvlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei 181 (191)
T PF06941_consen 135 VGG----DVLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEI 181 (191)
T ss_dssp C------SEEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSH
T ss_pred Eec----cEEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHH
Confidence 222 289999999999999999999999885543332 24566777663
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.8e-06 Score=78.83 Aligned_cols=51 Identities=24% Similarity=0.218 Sum_probs=44.1
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
....+.++..+++.+++++|+++++|++|||+.||+.|++.++...+.+..
T Consensus 161 i~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 161 ILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 345788999999999999999999999999999999999996655556654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-07 Score=95.45 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=50.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+ ..+.....|+++..+-.
T Consensus 503 p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN---A~eeVK~~Ad~VT~sNd 567 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN---GAEKTKAVADVIGVSND 567 (580)
T ss_pred cCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC---CCHHHHHhCCEEeCCCC
Confidence 456678899999999999999999999999999999999999665543 33344445566665443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.9e-08 Score=87.45 Aligned_cols=64 Identities=19% Similarity=0.147 Sum_probs=49.4
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
..+..|..+++.+++++|++++++++|||+.||+.|++.+|+.+++-+ ..+.....++.+..+-
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~n---a~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGN---ADEELKALADYVTDSN 247 (256)
T ss_pred CCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecC---chHHHHHhCCEEecCC
Confidence 356668899999999999999999999999999999999999766642 2223333445555543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-07 Score=79.45 Aligned_cols=112 Identities=25% Similarity=0.330 Sum_probs=78.2
Q ss_pred HHHHHHHHHHCCCCEEEEe--------CCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALAS--------NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s--------~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~~ 164 (383)
..+-++.+++.|+...++- .++++|++..+ ...+. +.+++|+|+.+|+. +.+.++..
T Consensus 58 ~e~R~~~l~~l~vd~v~~~~f~~~~~~~s~~~Fi~~il-~~~~~----~~ivvG~Df~FG~~~~g~~~~L~~~------- 125 (180)
T cd02064 58 LEEKLELLESLGVDYLLVLPFDKEFASLSAEEFVEDLL-VKLNA----KHVVVGFDFRFGKGRSGDAELLKEL------- 125 (180)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHH-hhcCC----eEEEEccCCCCCCCCCCCHHHHHHh-------
Confidence 3555666777777666542 25666777666 22233 88999999998864 34444433
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeee
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~ 244 (383)
++..|+.++.++....+.... +++.+++.+.+++... |+.+||+||+++|+|+
T Consensus 126 ----------------~~~~g~~v~~v~~~~~~~~~i-SST~IR~~i~~G~i~~----------an~lLg~~y~~~g~V~ 178 (180)
T cd02064 126 ----------------GKKYGFEVTVVPPVTLDGERV-SSTRIREALAEGDVEL----------ANELLGRPYSIEGRVV 178 (180)
T ss_pred ----------------hhhcCcEEEEeCcEecCCcEE-cHHHHHHHHHhCCHHH----------HHHHcCCCcEEEEEEe
Confidence 456788888888754333333 5477777777787775 9999999999999999
Q ss_pred ec
Q 016755 245 KG 246 (383)
Q Consensus 245 ~G 246 (383)
||
T Consensus 179 ~G 180 (180)
T cd02064 179 HG 180 (180)
T ss_pred eC
Confidence 98
|
FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.7e-07 Score=93.49 Aligned_cols=111 Identities=22% Similarity=0.257 Sum_probs=81.5
Q ss_pred cCCCCchHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~-~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++++.|+++|+ +++++|+.+....+..+ +.+|+..+|..+. | +.-..++++++..+++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~ 427 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL---------P--EDKLEIVKELREKYGP 427 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC---------c--HHHHHHHHHHHhcCCE
Confidence 35689999999999999999 99999999999888888 8899976654321 1 2224456666667789
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCC-CCccccccccchhh--cccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVI--NSLLDL 214 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~a~~vi--~~l~e~ 214 (383)
++||||+.||+.+++++|+ .+..+ ...+.....++.++ +++.++
T Consensus 428 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred EEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 9999999999999999997 44443 22222233456666 555553
|
. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.7e-06 Score=79.32 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=71.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCcccCcEEEeCCCC-----------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEV----------------- 144 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--------gl~~~f~~i~~~~~~----------------- 144 (383)
+...|.+..+|+.|++.|.++.++||++-.++...+.-.+ .|.++||.|++...-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 4456789999999999999999999999999888773222 477899999976320
Q ss_pred ---CCCC-------C---ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhc-CCEEEEecCC
Q 016755 145 ---RTGK-------P---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPSL 194 (383)
Q Consensus 145 ---~~~k-------p---~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~a-G~~~i~v~~~ 194 (383)
..++ + ...-...+++.+|+...++++|||+. .|+...+.. |++|+.|-+.
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 0111 1 23446677788999999999999999 798877766 9999887653
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.2e-07 Score=81.55 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=37.3
Q ss_pred CCCChHHHHHHHHHcCC--CCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 147 GKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~--~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+-.++.+++.+++.+++ ++.+|++|||+.||+.|.+.+|+.+++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 55567888888888866 677999999999999999999997653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.1e-06 Score=87.47 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=67.9
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+++||+.++++.|+++|++++++|+.....++..+ +.+|+. ++. +- .+++++ .++++++.++++|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-----~~~-~~--~p~~K~----~~v~~l~~~~~~v 469 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-----VRA-EV--LPDDKA----ALIKELQEKGRVV 469 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-----EEc-cC--ChHHHH----HHHHHHHHcCCEE
Confidence 3568999999999999999999999999999888888 788884 221 11 122333 3444555577899
Q ss_pred EEEecChhhhHHHHhcCCEE
Q 016755 169 LVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~ 188 (383)
+||||+.||+.+++++|+.+
T Consensus 470 ~~VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 470 AMVGDGINDAPALAQADVGI 489 (562)
T ss_pred EEEeCCCccHHHHhhCCEEE
Confidence 99999999999999999743
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.6e-06 Score=64.67 Aligned_cols=115 Identities=12% Similarity=0.180 Sum_probs=92.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
.-++++.+.+.+++|++. +.++++|+--..++.+.. +..|+.. +.++.+ .+++.-..+++.|+-+-+-|
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~~--~rv~a~-------a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIPV--ERVFAG-------ADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCce--eeeecc-------cCHHHHHHHHHHhcCCCcEE
Confidence 467899999999999999 999999998888888777 6666532 333332 35677788889998888999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+||||+.||+.+.+++...++.+............|+.++++..+.
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ 142 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI 142 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence 9999999999999999998888876444444456778899888773
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.3e-06 Score=77.10 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=46.0
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~ 145 (383)
|++.++|++|+++|++++++|+++++.+...+ +.+|+..+|+.++++++..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA 201 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence 67889999999999999999999999998888 8899999999998887643
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-06 Score=80.55 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=43.3
Q ss_pred CCCCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~--p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..+..+...++.+++++|++ .+++++|||+.||+.|.+.+|..+++-+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 35567788899999999999 99999999999999999999998876554
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.7e-05 Score=67.18 Aligned_cols=101 Identities=15% Similarity=0.158 Sum_probs=64.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH-HcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK-RLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~-~lg~~ 164 (383)
..++.|++.++++.++++|+.+.++|+.++.. +...| ...|+..+ +.++....-...++ ...|+...+ ++--.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~-~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKT-VVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCch-HhHHHHHHHHHHHhC
Confidence 56889999999999999999999999999766 55566 56777654 56665432112232 122222221 22222
Q ss_pred CCc-EEEEecChhhhHHHHhcCCEEEEecC
Q 016755 165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 165 p~e-~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.-+ +..|||..+|+.+ ..+|.++.-+++
T Consensus 195 GYrIv~~iGDq~sDl~G-~~~~~RtFKLPN 223 (229)
T TIGR01675 195 GYRIWGNIGDQWSDLLG-SPPGRRTFKLPN 223 (229)
T ss_pred CceEEEEECCChHHhcC-CCccCceeeCCC
Confidence 223 5779999999965 355656655554
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=5e-06 Score=88.75 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=71.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.+.|++.+.++.|++.|++++++|+......+... +.+|+..+ +..- .|+....++++++..+++++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~----~~~~-------~p~~K~~~i~~l~~~~~~v~ 716 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEV----IAGV-------LPDGKAEAIKRLQSQGRQVA 716 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEE----EeCC-------CHHHHHHHHHHHhhcCCEEE
Confidence 467899999999999999999999999988888777 78888543 3221 13445567778888899999
Q ss_pred EEecChhhhHHHHhcCCEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i 189 (383)
||||+.||+.+++.+|+.+.
T Consensus 717 ~vGDg~nD~~al~~Agvgia 736 (834)
T PRK10671 717 MVGDGINDAPALAQADVGIA 736 (834)
T ss_pred EEeCCHHHHHHHHhCCeeEE
Confidence 99999999999999999443
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00015 Score=63.10 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=79.6
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC-CCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG-KPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~-kp~p~~~~~~~~~lg~~p~e 167 (383)
....++++...++..+..|++++|.|.+.......+. .+.+-.+.-..+-+-.|...| |-....|..+.+.+|.++.+
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhh
Confidence 3578999999999999999999999998877665544 322222211222222334443 55678899999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
.++.-|-+.-..+|+.+|..+..+.+.
T Consensus 200 iLfLTd~~~Ea~aa~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 200 ILFLTDVPREAAAARKAGLQAGLVSRP 226 (254)
T ss_pred eEEeccChHHHHHHHhcccceeeeecC
Confidence 999999999999999999988776553
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=64.93 Aligned_cols=92 Identities=14% Similarity=0.206 Sum_probs=58.0
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHH---HHHHhh-----cCCcccCcEEEeCCCCC---------CCCC---ChH
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEVR---------TGKP---SPD 152 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~---~~l~~~-----~gl~~~f~~i~~~~~~~---------~~kp---~p~ 152 (383)
.|++.++++.++++|+++.++|+.+..... ..+ .. .++.. ..+++..... ..+| +.+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 588999999999999999999999977664 455 33 12221 2444433211 1223 333
Q ss_pred HHHHHHHHcCCCCCc-EEEEecChhhhHHHHhcCCE
Q 016755 153 IFLEAAKRLNMEPSS-SLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e-~l~VGDs~~Di~~a~~aG~~ 187 (383)
.+..+.+.+.-.--. ++.+||+.+|+.+=+++|++
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 444444433222223 34588889999999999995
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.7e-06 Score=87.29 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=81.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.++++.|++.|+++.++|+.......... +.+|+...++.++.+.+.. ++...|+-.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 67899999999999999999999999988888777 8889987777776665442 344677777
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
..+.+.++...+.+.|+||+.||+.++++|++.+.
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence 78888777777899999999999999999997443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.5e-05 Score=71.07 Aligned_cols=47 Identities=21% Similarity=0.164 Sum_probs=37.8
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+-.|..+++.+++++++++++++++|||.||+.|. ..+...|+|.+
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 455578999999999999999999999999999999 66677777766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00018 Score=71.64 Aligned_cols=92 Identities=16% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC-C---C--CCC---C---C-hHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE-V---R--TGK---P---S-PDIFLEAA 158 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~-~---~--~~k---p---~-p~~~~~~~ 158 (383)
+.|.+.+ .++++|. .+++|.+++..++....+.+|+ +.+++.+- + + -|+ + . .+-...+.
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~ 182 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGA----DKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVL 182 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCC----CEEEecccEECcCCEEeeeecCCCCCccHHHHHHHH
Confidence 5555554 4456674 4999999999999888445787 55554431 1 0 011 1 0 11222222
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
+.+|.+... ++.|||.+|..+.+.++-..++-+
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 456654444 899999999999999997765543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.8e-05 Score=80.20 Aligned_cols=47 Identities=6% Similarity=-0.020 Sum_probs=41.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEE--ecChhhhHHHHhcCCEEEEecC
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~V--GDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+-.|..+++.+++.+|++.++++.| ||+.||+.|.+.+|..+++-..
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 5667899999999999999999998 9999999999999998877444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00013 Score=66.95 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 147 GKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~--p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+.++..+.+.+.+.+.-. +-.++.+|||+||+.|.+.+.+.+++
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 345566676666665543 55899999999999999999998876
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.9e-05 Score=60.10 Aligned_cols=85 Identities=16% Similarity=0.181 Sum_probs=63.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc------C
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL------N 162 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l------g 162 (383)
.+.++|.+.+++++++..|+-+..+|=+...-.-..| ..+++..+|+.++.-..- . +-.++-.+++++ .
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~ViePhP--~--K~~ML~~llr~i~~er~~~ 113 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVIEPHP--Y--KFLMLSQLLREINTERNQK 113 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEecCCC--h--hHHHHHHHHHHHHHhhccc
Confidence 4679999999999999999988888887777666677 788999999988753211 1 123444444443 4
Q ss_pred CCCCcEEEEecChhhh
Q 016755 163 MEPSSSLVIEDSVIGV 178 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di 178 (383)
+.|+++++++|..--+
T Consensus 114 ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 114 IKPSEIVYLDDRRIHF 129 (164)
T ss_pred cCcceEEEEecccccH
Confidence 7899999999987433
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.6e-05 Score=73.92 Aligned_cols=45 Identities=20% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCChHHHHHHHHHc---CCCCCcEEEEecChhhhHHHHhcCC-EEEE
Q 016755 146 TGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGM-EVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~l---g~~p~e~l~VGDs~~Di~~a~~aG~-~~i~ 190 (383)
.+-.|..+++.+++++ |+++++++++||+.||++|.+.+|. .+++
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 4566789999999999 9999999999999999999999994 5544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.83 E-value=4e-05 Score=68.84 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=61.0
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCC---CC-ChHHHHHHHHH-c
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTG---KP-SPDIFLEAAKR-L 161 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~---kp-~p~~~~~~~~~-l 161 (383)
..+.||+.++++.++++|+.+.++|+.++.. ....| ...|...+-..++-+...... .. +......+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 3788999999999999999999999987664 33344 556765443334333332111 11 23333333333 2
Q ss_pred CCCCCcEEEEecChhhhHHHHhc---CCEEEEecC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAA---GMEVVAVPS 193 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~a---G~~~i~v~~ 193 (383)
.+ +++|||..+|+..++.. +.+++.++.
T Consensus 193 ~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp EE----EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred cE----EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 23 88899999999984433 345555544
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00052 Score=62.27 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=62.5
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH-HHHcCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA-AKRLNME 164 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~-~~~lg~~ 164 (383)
..++.|++.++++.+++.|+++.++|+..+.. ....| ...|...+ +.++....-...+...--++.. .+++--+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 56789999999999999999999999998654 33344 45676544 5555543221122121222211 1121112
Q ss_pred C-CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 165 P-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 165 p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
. .=+..|||..+|+.+....+-++.-+++
T Consensus 221 GYrIv~~iGDq~sDl~G~~~g~~RtFKLPN 250 (275)
T TIGR01680 221 GYNIVGIIGDQWNDLKGEHRGAIRSFKLPN 250 (275)
T ss_pred CceEEEEECCCHHhccCCCccCcceecCCC
Confidence 2 2267799999999665533356666665
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00012 Score=77.02 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=66.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|++++++|+.......... +.+|+..++. -. |+--..++++++ .+..|+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~~----------~~--p~~K~~~v~~l~-~~~~v~ 632 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRAG----------LL--PEDKVKAVTELN-QHAPLA 632 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeecC----------CC--HHHHHHHHHHHh-cCCCEE
Confidence 478899999999999999999999999988888777 8888842211 11 222333445555 346899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
||||+.||..+++.+++.+.+
T Consensus 633 mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 633 MVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred EEECCHHhHHHHHhCCeeEEe
Confidence 999999999999999965544
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.49 E-value=2.6e-05 Score=65.99 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=61.5
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.+.+.||+.++|+.+.+. +.+++.|.+.+.++..++ +.+.- ..+|+.++..+.+...+... .+-++.+|-++++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~~---~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGSY---IKDLSKLGRDLDN 108 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTEE---E--GGGSSS-GGG
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhcccccccccccccccccccc---ccchHHHhhcccc
Confidence 356789999999999766 999999999999999888 65554 46778888777654322211 1456677778999
Q ss_pred EEEEecChhhhHHHHhc
Q 016755 168 SLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~a 184 (383)
+++|.|++.-...-...
T Consensus 109 vvivDD~~~~~~~~~~N 125 (159)
T PF03031_consen 109 VVIVDDSPRKWALQPDN 125 (159)
T ss_dssp EEEEES-GGGGTTSGGG
T ss_pred EEEEeCCHHHeeccCCc
Confidence 99999999754333333
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0046 Score=56.34 Aligned_cols=104 Identities=14% Similarity=0.236 Sum_probs=72.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCc--cc-C--cEEE----------------eCCCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWN--ES-F--SVIV----------------GSDEVRTG 147 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~--~~~gl~--~~-f--~~i~----------------~~~~~~~~ 147 (383)
..-+.+.++++.|+.+|+++..+|..+..+....+. +.+|+. .. | +..+ -|--+..+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 355688999999999999999999888766555441 345542 11 0 0011 00012245
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecChhhhHH----HHhcCCEEEEecCC
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----GKAAGMEVVAVPSL 194 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~----a~~aG~~~i~v~~~ 194 (383)
.++..++...+.+.|..|+.++||+|+...+.. ++..|+..+++...
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 668899999999999999999999999976654 45668888887664
|
The function is not known. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00035 Score=75.32 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=79.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----cEEEeCCCC----------------CCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKPS 150 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f----~~i~~~~~~----------------~~~kp~ 150 (383)
++.|++.+.++.|++.|+++.++|+.......... +..|+...- ...+.+.++ -+++-.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 57899999999999999999999998877766666 777774311 112332221 123445
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
|+--..+++.++-..+.+.|+||+.||+.|.+.|++.+.+- .+ .+.....|+.++.+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g--~~~ak~aAD~vl~d 672 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG--TEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC--cHHHHHhcCeEEcc
Confidence 66667777777767788999999999999999999955432 22 22223345666544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0011 Score=62.61 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=68.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|+.|+++|++++++||++... +...+ +.+|+...++.|+++.. .....+++.+.....
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDK 113 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCCC
Confidence 367899999999999999999999988433 33344 56788766677766532 455566666665556
Q ss_pred EEEEecChhhhHHHHhcCCEEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.++++++..+.+.++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 78899999999999999998764
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0033 Score=58.12 Aligned_cols=103 Identities=15% Similarity=0.239 Sum_probs=74.9
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHh--hcCCcccCcEEEeCCCCC-----CCCC-------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVR-----TGKP------------- 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~--~~gl~~~f~~i~~~~~~~-----~~kp------------- 149 (383)
+.-.|....+|+.|+++|.++.++||+|..|+..-+.- ...+.++||.|++-.+-. ..+|
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w 318 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW 318 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence 34456788899999999999999999999999876521 224678899888643211 0111
Q ss_pred ------------ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEec
Q 016755 150 ------------SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVP 192 (383)
Q Consensus 150 ------------~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~ 192 (383)
....+...++.-|+...+++++||++ .|+...- ++|+++..+-
T Consensus 319 dkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 319 DKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 12335566777788999999999999 7988776 8999876543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00063 Score=70.15 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=69.1
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
++.|++.+.+++|++.|+++.++|+.......... +.+|+.+ +++. -.|+--..+++.+.-....+.|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~~----v~a~-------~~PedK~~~v~~lq~~g~~Vam 513 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVDD----FIAE-------ATPEDKIALIRQEQAEGKLVAM 513 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCE----EEcC-------CCHHHHHHHHHHHHHcCCeEEE
Confidence 67899999999999999999999999888877776 7888843 3321 1344444444555444567999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
+||+.||..+.+.+++.+.+-
T Consensus 514 vGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 514 TGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred ECCCcchHHHHHhCCEeEEeC
Confidence 999999999999999976654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00079 Score=69.73 Aligned_cols=89 Identities=20% Similarity=0.222 Sum_probs=68.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|+++.++|+-.+...+... +.+|++++ +.. - .|+--....+++.-....+.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId~v----~Ae-----l--lPedK~~~V~~l~~~g~~Va 603 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGIDEV----RAE-----L--LPEDKAEIVRELQAEGRKVA 603 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChHhh----ecc-----C--CcHHHHHHHHHHHhcCCEEE
Confidence 468899999999999999999999998888777766 88888433 321 1 23444455556655557899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
||||+.||..+...|.+...+
T Consensus 604 mVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 604 MVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred EEeCCchhHHHHhhcCeeEee
Confidence 999999999999999885443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0044 Score=51.96 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=63.0
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
|.+-+.+++..-.++|-.++++|+....- +...|.+.+.+...-..++.|+-- ||...---.+++..++ -
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~Kt~~i~~~~~----~ 187 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTKTQWIQDKNI----R 187 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---CcccccccHHHHhcCc----e
Confidence 44566788888888999999999876543 344555556665443445555432 2222222234444444 5
Q ss_pred EEEecChhhhHHHHhcCCEEEEecC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++.|||-+|+.+|+++|.+.|-+-+
T Consensus 188 IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 188 IHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred EEecCCchhhhHHHhcCccceeEEe
Confidence 8999999999999999998877655
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=55.87 Aligned_cols=82 Identities=18% Similarity=0.129 Sum_probs=62.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccC-cEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~-~~f-~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
.+.++||+.++|+.+++. ++++++|++.+.++...+ +.++.. .+| +.+++.+++. .+. .+.+-.-++.+.+
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~--~~~---~KdL~~i~~~d~~ 128 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESG--SPH---TKSLLRLFPADES 128 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCC--CCc---cccHHHHcCCCcc
Confidence 467899999999999965 999999999999999988 788877 478 5667766653 111 1122134577889
Q ss_pred cEEEEecChhh
Q 016755 167 SSLVIEDSVIG 177 (383)
Q Consensus 167 e~l~VGDs~~D 177 (383)
.++.|+|++.=
T Consensus 129 ~vvivDd~~~~ 139 (156)
T TIGR02250 129 MVVIIDDREDV 139 (156)
T ss_pred cEEEEeCCHHH
Confidence 99999999843
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0015 Score=67.53 Aligned_cols=89 Identities=15% Similarity=0.156 Sum_probs=70.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
++.||+.+.+++|++.|+++.++|+-......... +.+|+.+ +++ .-.|+--..+.++++-..+-+.|
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId~----v~A-------~~~PedK~~iV~~lQ~~G~~VaM 512 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDD----FLA-------EATPEDKLALIRQEQAEGRLVAM 512 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcE----EEc-------cCCHHHHHHHHHHHHHcCCeEEE
Confidence 57899999999999999999999998888777666 7888843 322 22456666666666666677999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
+||+.||..+.++|.+...+-
T Consensus 513 tGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 513 TGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred ECCCcchHHHHHhCCEeEEeC
Confidence 999999999999999866554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0024 Score=66.03 Aligned_cols=90 Identities=11% Similarity=0.089 Sum_probs=71.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.+++|++.|+++.++|+-......... +.+|+.+ ++ ..-.|+--..+.+.++-..+-+.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~~----v~-------A~~~PedK~~iV~~lQ~~G~~Va 507 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVDR----FV-------AECKPEDKINVIREEQAKGHIVA 507 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCce----EE-------cCCCHHHHHHHHHHHHhCCCEEE
Confidence 368899999999999999999999998887777666 8889853 22 12245666666677666667799
Q ss_pred EEecChhhhHHHHhcCCEEEEe
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v 191 (383)
|+||+.||..+.++|.+...+-
T Consensus 508 MtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred EECCChhhHHHHHhCCEEEEeC
Confidence 9999999999999999865544
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0014 Score=71.10 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=73.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +..|+...-..++.+.++. +..-.|+--
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 57789999999999999999999998877776666 7788864323455554422 233355555
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+.+.+.-..+-+.|+||+.||..|.++|.+...+
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec
Confidence 566666655566899999999999999999886553
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.001 Score=71.47 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +.+|+.. +.++.|.+.. +..-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 46789999999999999999999998877766666 7888853 3455554432 233456666
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+.+.+.-..+-+.|+||+.||..+.++|.+...+-
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg 663 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC
Confidence 6666666656677999999999999999999876553
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0014 Score=70.29 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=72.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+.. +.++.+.+.. +..-.|+--
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 56789999999999999999999998877666555 7888853 2345444321 223345555
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
..+.+.+.-..+.+.|+||+.||..+.+.|.+...+-
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg 628 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD 628 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC
Confidence 5555555555678999999999999999999976654
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0016 Score=70.09 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=74.1
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----------------CCCCChHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----------------~~kp~p~~~ 154 (383)
++.|++.+.++.|++.|+++.++|+-......... +.+|+.. +.++.|.+.. +..-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 57789999999999999999999998877766666 7888853 3455554432 233356666
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+.+.+.-..+-+.|+||+.||..+.++|.+...+
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 666666666667899999999999999999987554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00094 Score=58.78 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=41.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
..+.+++.+++.++++++++++++++|||+.||+.+++.+|+.++
T Consensus 159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 457889999999999999999999999999999999999999765
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=67.83 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=72.4
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC----------------------CCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGK 148 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~----------------------~~~k 148 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+.. .++.+++. -+..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGT---NIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC---CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 57889999999999999999999998888777666 7888853 12222211 1233
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-.|+--..+.+.+.-..+-+.|+||+.||..+.++|.+...+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 355555666666666667899999999999999999987654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0026 Score=69.39 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc----------CcEEEeCCCCC---------------
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES----------FSVIVGSDEVR--------------- 145 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~----------f~~i~~~~~~~--------------- 145 (383)
++.|++.+.++.|++.|+++.++|+.......... +..|+... -..++.|.++.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 57889999999999999999999998888777666 77887531 12455554332
Q ss_pred -CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 -TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 -~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+..-.|+--..+.+.+.-..+.+.|+||+.||..|.+.|.+.+.+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm 770 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec
Confidence 223355555556666655567899999999999999999986654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.011 Score=52.23 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=58.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH-HH---HHHHhhcCCcccC-cEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IE---SKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~-i~---~~l~~~~gl~~~f-~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
...+.||+.+++....++|..+..+||...+. .. .-| ...|+.... ++++.- ...+++..-...+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k---- 191 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQAVEK---- 191 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHHHhh----
Confidence 45789999999999999999999999987765 22 234 456665432 334333 234555555555444
Q ss_pred CCCcEEEEecChhhhHHH
Q 016755 164 EPSSSLVIEDSVIGVVAG 181 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a 181 (383)
.-.-++.|||...|....
T Consensus 192 ~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 192 DYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred ccceeeEecCchhhhcch
Confidence 445689999999886544
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.013 Score=45.44 Aligned_cols=84 Identities=19% Similarity=0.178 Sum_probs=52.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++++.|+++|.++.++||++... +...| +.+|+..-.+.|+++. ......+++. .....
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence 689999999999999999999999997433 34455 5678765445666543 2334444442 33566
Q ss_pred EEEEecChhhhHHHHhcCC
Q 016755 168 SLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~ 186 (383)
++++|-. ...+.++.+|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 7777754 55566666664
|
... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.011 Score=47.58 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=23.7
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT 120 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~ 120 (383)
+.+++.+.|+.++++|+.+.++|+.+...
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 55677788899989999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0035 Score=56.44 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=41.2
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
.+-.+..+++.+++.+|++++++++|||+.||+.|.+.+|..+++-
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence 4556789999999999999999999999999999999999976554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.023 Score=47.51 Aligned_cols=93 Identities=19% Similarity=0.238 Sum_probs=55.8
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhc-----CCcccCcEEEeCCCC-------CCCCCChHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----GWNESFSVIVGSDEV-------RTGKPSPDIFLE 156 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~-----gl~~~f~~i~~~~~~-------~~~kp~p~~~~~ 156 (383)
..||+.++++.+++.||++..+|..+... ...+| ... ++.. --++.+.+. ..-..+|+.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L-~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL-AQHQQQGHNLPD--GPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH-HHHHhCCccCCC--CCEEECCcchhhhhhccccccChHHHHH
Confidence 45789999999999999999999988543 33344 222 2221 122333111 111335555554
Q ss_pred HH-HHcC-C----CCCcEEEEecChhhhHHHHhcCCE
Q 016755 157 AA-KRLN-M----EPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 157 ~~-~~lg-~----~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
.+ +.+. . ...=...+|++.+|+.+=+++|++
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 43 2221 1 112255689999999999999985
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.013 Score=63.26 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=77.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC--cEEEeCCCCC----------------CCCCCh
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVR----------------TGKPSP 151 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f--~~i~~~~~~~----------------~~kp~p 151 (383)
-+|.|++.+.++.|++.|+++.++|+-........- +..|+..-- +.++.|.+.. +.+=.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 468899999999999999999999998777666555 778876533 2366665432 223355
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+--..+.+.+.-...-+.|.||+.||+.|.++|.+.+.+...
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~ 666 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence 555556666666677899999999999999999998766654
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.035 Score=46.26 Aligned_cols=93 Identities=16% Similarity=0.079 Sum_probs=56.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-cccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl-~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+-.++...|..++++ .++..+|.....+.+..- ..+-. ...++++....- .+| -.+.+.++++
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~-~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~id---- 136 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITY-AWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNID---- 136 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHH-HHHHHhccchhhhhhhcc--ccc------chhhHhhccC----
Confidence 34455778888888887 578888877666544221 11111 111233321111 112 2334555554
Q ss_pred EEEecCh-hhhHHHHhcCCEEEEecCCCC
Q 016755 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 169 l~VGDs~-~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+++.|+. |-.+.|+.+|++++.++....
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~yn 165 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYN 165 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCccc
Confidence 7899999 778889999999999988544
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0061 Score=55.37 Aligned_cols=61 Identities=15% Similarity=0.024 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc-------CCEEEEecCCCCccccccccchhhccccc
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a-------G~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.|...++.++++++..+.++++|||+.+|+.+++.+ |...+.+..+ .....+++++++..+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHH
Confidence 356999999999999999999999999999999988 6666666432 122345667766655
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.061 Score=53.12 Aligned_cols=78 Identities=12% Similarity=0.020 Sum_probs=47.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----CC------CCCCChHH-HHHHHHHcCCCCCc
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VR------TGKPSPDI-FLEAAKRLNMEPSS 167 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----~~------~~kp~p~~-~~~~~~~lg~~p~e 167 (383)
..+..++.| +.+++|.+++.+++..+.+++|. |.|++.+- .+ .++...+. ...+.+.+| +...
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~ 174 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFV-DERP 174 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhC-ccCc
Confidence 556667788 89999999999999999666887 55543321 00 12333333 223333355 3345
Q ss_pred EEEEecChhhhHHHH
Q 016755 168 SLVIEDSVIGVVAGK 182 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~ 182 (383)
.+-+||+..|-....
T Consensus 175 ~vg~~~~~~~~~f~~ 189 (498)
T PLN02499 175 QLGLGRISASSSFLS 189 (498)
T ss_pred eecccCCcccchhhh
Confidence 777888775544443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.017 Score=63.08 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=70.9
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC------------------------cEEEeCCCCC-
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEVR- 145 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f------------------------~~i~~~~~~~- 145 (383)
++.|++.+.++.+++.|+++.++|+.......... +.+|+..-- ..++.|.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 56789999999999999999999999988777666 667763210 1345544322
Q ss_pred -----------------CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 -----------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 -----------------~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+.+-.|+--..+.+.+.-...-|.|+||+.||+.|.+.|.+...+
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 233345555555555554456799999999999999999986544
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.021 Score=49.73 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCcEEEeCCCC--------CCCCCChHHHHHHHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIVGSDEV--------RTGKPSPDIFLEAAKR 160 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~~i~~~~~~--------~~~kp~p~~~~~~~~~ 160 (383)
...|++.++|+.+.+. |.++|-|.+...+++..+ ..+++.. .+...+.-+.. ..+.-.-.-+..+-++
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~ 122 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWAL 122 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhh
Confidence 4678999999999985 999999999999999888 6555421 11111111111 0110001112223334
Q ss_pred cC--CCCCcEEEEecChhhhHHHHhcCC
Q 016755 161 LN--MEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 161 lg--~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
++ .+.+++++|.|++.-..+--..|+
T Consensus 123 l~~~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 123 LPEFYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred cccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence 54 377999999999965443333344
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=59.60 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc----EEEeCCCCC----------------CCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVR----------------TGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~----~i~~~~~~~----------------~~kp 149 (383)
-+|.|++.+.++.++..|+++.++|+-.......+. +..|+...-+ ..++|.++. +..-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 357889999999999999999999999888777666 7788765444 445554432 2233
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.|.--.++.+.|.-..+=+.|-||+.||-.+.+.|.+...+
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence 55666666777776777899999999999999999885544
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.0039 Score=56.77 Aligned_cols=44 Identities=7% Similarity=-0.172 Sum_probs=36.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEec
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~ 192 (383)
..+-.|..+++.++++ ++++++||| +.||++|.+.++...+.|.
T Consensus 184 ~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3566678899999888 699999999 8999999998877666665
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.038 Score=55.75 Aligned_cols=86 Identities=15% Similarity=0.112 Sum_probs=65.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.+.|++.+.++.|++.|+++.++|+.........- +.+|+ ++.-.|+-.....+++.-....+.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi--------------~~~~~p~~K~~~v~~l~~~g~~v~ 410 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI--------------FARVTPEEKAALVEALQKKGRVVA 410 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc--------------eeccCHHHHHHHHHHHHHCCCEEE
Confidence 468899999999999999999999998888776655 66665 122345555555555544457899
Q ss_pred EEecChhhhHHHHhcCCEEEE
Q 016755 170 VIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++||+.||..+.+.+++...+
T Consensus 411 ~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred EECCChhhHHHHHhCCCcccc
Confidence 999999999999999876443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.032 Score=58.18 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++...+..|++.|++++++|+-......... +..|+ +.|++. -+| +--....+++.-....+.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VGi----~~V~ae-----v~P--~~K~~~Ik~lq~~~~~Va 789 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVGI----DNVYAE-----VLP--EQKAEKIKEIQKNGGPVA 789 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhCc----ceEEec-----cCc--hhhHHHHHHHHhcCCcEE
Confidence 467899999999999999999999998888777666 77774 555542 122 222233344444457899
Q ss_pred EEecChhhhHHHHhcCCEEEEe
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v 191 (383)
||||+.||-.+...|.+....-
T Consensus 790 MVGDGINDaPALA~AdVGIaig 811 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVGIAIG 811 (951)
T ss_pred EEeCCCCccHHHHhhccceeec
Confidence 9999999999998887755433
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.028 Score=51.10 Aligned_cols=49 Identities=16% Similarity=0.307 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~ 143 (383)
|.+.+.|.+|++.|.-+++=|-+.++++...+ +.+++.++|+.++++..
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGGN 193 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCCc
Confidence 44567788999999889999999999999999 88899999999998754
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.039 Score=53.14 Aligned_cols=37 Identities=14% Similarity=-0.027 Sum_probs=31.8
Q ss_pred CCCChHHHHHHHHHcCCCCCc---EEEEecChhhhHHHHh
Q 016755 147 GKPSPDIFLEAAKRLNMEPSS---SLVIEDSVIGVVAGKA 183 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e---~l~VGDs~~Di~~a~~ 183 (383)
+..|..+++.+++++|++..+ .++|||..+|..|.+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 556788999999999988764 3899999999999986
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.0072 Score=46.86 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=28.7
Q ss_pred EEEecCCcccccHHHHHHHH--HHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH
Q 016755 12 VILDLDGTLLNTDGMFSEVL--KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH 73 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~--~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 73 (383)
++||+||||++....+..+. -+.+++.|.++- .+..-...+..+.... +..+|++.+.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~--~lTNns~~s~~~~~~~-L~~~Gi~~~~~ 61 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVV--FLTNNSSRSREEYAKK-LKKLGIPVDED 61 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEE--EEES-SSS-HHHHHHH-HHHTTTT--GG
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEE--EEeCCCCCCHHHHHHH-HHhcCcCCCcC
Confidence 68999999998754443332 223444453321 1122222333444444 47788775543
|
... |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.035 Score=49.89 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
...+.|+.|+++|+.++++|+.+...+...+ ..+++.
T Consensus 19 ~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~-~~~~~~ 55 (254)
T PF08282_consen 19 ETIEALKELQEKGIKLVIATGRSYSSIKRLL-KELGID 55 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSTHHHHHHHH-HHTTHC
T ss_pred HHHHHHHhhcccceEEEEEccCccccccccc-ccccch
Confidence 3456778888899999999999999888888 666664
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.11 Score=48.03 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=58.8
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~---~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.++|+.|+++|++++++||++.. .....+ +.+|+....+.++++. ......+++.......
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKA 87 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCE
Confidence 36788999999999999999999997533 222345 5677754444444432 3444555554445677
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
++++|+. .....++.+|+..+
T Consensus 88 v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCH-HHHHHHHHCCCEEe
Confidence 9999986 34455677888754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.065 Score=51.65 Aligned_cols=101 Identities=19% Similarity=0.157 Sum_probs=81.9
Q ss_pred cCCCCc--hHHHHHHHHHHCCCCEEEEeCC--ChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 89 KVKALP--GANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 89 ~~~~~p--g~~~lL~~L~~~G~~~~i~s~~--~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...++| .-.++.+.+.+.|.++.++|.- |.+.++..| ...|.+..---++.+.++...|.....|..+++.-+++
T Consensus 95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 344555 4468999999999999999986 455666666 55565443334778888899999999999999999999
Q ss_pred CCcEEEEecCh-hhhHHHHhcCCEEEE
Q 016755 165 PSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (383)
Q Consensus 165 p~e~l~VGDs~-~Di~~a~~aG~~~i~ 190 (383)
|...+.+||.. .|..++++.|+.|..
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf 200 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLF 200 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHH
Confidence 99999999999 699999999997753
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.1 Score=57.41 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE--------------------------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-------------------------------- 137 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~-------------------------------- 137 (383)
-++.|++.+.++.|++.|+++.++|+.......... +..|+...-+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQV 733 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccc
Confidence 358899999999999999999999998877666555 66776321111
Q ss_pred ---------------------EEeCCCCC-------------------CCCCChHHHHHHHHHcCCCCCcEEEEecChhh
Q 016755 138 ---------------------IVGSDEVR-------------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177 (383)
Q Consensus 138 ---------------------i~~~~~~~-------------------~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~D 177 (383)
++.|.++. +.+-.|+--..+.+.+.-...-+.|+||+.||
T Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND 813 (1054)
T TIGR01657 734 EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGAND 813 (1054)
T ss_pred cccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHH
Confidence 12221110 11223444444445555455679999999999
Q ss_pred hHHHHhcCCEEEEe
Q 016755 178 VVAGKAAGMEVVAV 191 (383)
Q Consensus 178 i~~a~~aG~~~i~v 191 (383)
+.|.++|.+...+-
T Consensus 814 ~~ALK~AdVGIam~ 827 (1054)
T TIGR01657 814 CGALKQADVGISLS 827 (1054)
T ss_pred HHHHHhcCcceeec
Confidence 99999998866554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.06 Score=49.57 Aligned_cols=35 Identities=3% Similarity=0.028 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
|..++..+++.+|+..+++++|||+.||+.|.+.+
T Consensus 175 Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 175 KGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 44455555566666666666666666666666655
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.12 Score=45.16 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=46.9
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcc----cCcEEEeCCCCCCCCCCh-HHHHHHHHHcCCC
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNE----SFSVIVGSDEVRTGKPSP-DIFLEAAKRLNME 164 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~----~f~~i~~~~~~~~~kp~p-~~~~~~~~~lg~~ 164 (383)
+|-....|..+++ +...+.+-+.... ....| ...|+.- .|-++. +...||.+. ..+...-++++..
T Consensus 136 lpre~aaLa~~rE--yseti~~rs~d~~~~~~~~~L-~e~glt~v~garf~~v~---~as~gKg~Aa~~ll~~y~rl~~~ 209 (274)
T COG3769 136 LPREQAALAMLRE--YSETIIWRSSDERMAQFTARL-NERGLTFVHGARFWHVL---DASAGKGQAANWLLETYRRLGGA 209 (274)
T ss_pred CChHHhHHHHHHH--hhhheeecccchHHHHHHHHH-HhcCceEEeccceEEEe---ccccCccHHHHHHHHHHHhcCce
Confidence 3444555666665 3455555554441 22334 3445421 112222 223455532 3333333444432
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
. -++.+||++||+.+.......+ .|.
T Consensus 210 r-~t~~~GDg~nD~Pl~ev~d~Af-iV~ 235 (274)
T COG3769 210 R-TTLGLGDGPNDAPLLEVMDYAF-IVK 235 (274)
T ss_pred e-EEEecCCCCCcccHHHhhhhhe-eec
Confidence 2 5999999999999987765443 444
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.55 Score=41.36 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=32.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl 131 (383)
..++.||+.+.++.|.+. ..-.++|.+.+.++.+.. ...|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence 468999999999999886 666788888888877666 55554
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.057 Score=59.54 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=72.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----------------------------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---------------------------------- 135 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f---------------------------------- 135 (383)
-++.||+.+.++.|++.|+++.++|+-..+...... ...|+-..-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 708 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN 708 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence 468899999999999999999999997766554443 333432110
Q ss_pred -------cEEEeCCCCC----------------------CCCCChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcC
Q 016755 136 -------SVIVGSDEVR----------------------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 136 -------~~i~~~~~~~----------------------~~kp~p~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG 185 (383)
..++.|.+.. +.+-.|.--..+.+.+.-. ..-++++||+.||+.|.++|.
T Consensus 709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~Ad 788 (1057)
T TIGR01652 709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEAD 788 (1057)
T ss_pred hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcC
Confidence 0133332111 1111222222222322222 467999999999999999998
Q ss_pred CEEEEecCCCCccccccccchhhcccccc
Q 016755 186 MEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 186 ~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+.+ .+.. .+.......||.++.++..+
T Consensus 789 VGI-gi~g-~eg~qA~~aaD~~i~~F~~L 815 (1057)
T TIGR01652 789 VGV-GISG-KEGMQAVMASDFAIGQFRFL 815 (1057)
T ss_pred eee-EecC-hHHHHHHHhhhhhhhhHHHH
Confidence 866 3322 22112334568887765543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.21 Score=45.84 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=55.8
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
...+++||+.++|+.|+++|.++.++||++... +...|....++....+.|+++.... ...+.+. .+
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at---------~~~l~~~-~~ 90 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT---------ADYLAKQ-KP 90 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH---------HHHHHhh-CC
Confidence 467899999999999999999999999997554 3344423355655567777664322 1112111 12
Q ss_pred CCcEEEEecChhhhHHHHhcCCEE
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~ 188 (383)
+..|++|| ...+.+..+.+|+..
T Consensus 91 ~~kv~viG-~~~l~~~l~~~G~~~ 113 (269)
T COG0647 91 GKKVYVIG-EEGLKEELEGAGFEL 113 (269)
T ss_pred CCEEEEEC-CcchHHHHHhCCcEE
Confidence 25566666 333455555555543
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.21 Score=41.08 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=60.2
Q ss_pred CCCCchHHHHHHHHHHC-C-CCEEEEeCCChH-------HHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH-
Q 016755 90 VKALPGANRLIKHLSCH-G-VPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK- 159 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~-G-~~~~i~s~~~~~-------~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~- 159 (383)
....|....-+++++.. | ..++++||+... .....+....|+.- ....+-+|..-.+..+
T Consensus 60 ~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV----------lRHs~kKP~ct~E~~~y 129 (190)
T KOG2961|consen 60 LAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV----------LRHSVKKPACTAEEVEY 129 (190)
T ss_pred cccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce----------EeecccCCCccHHHHHH
Confidence 34455555555555543 3 568889887422 22233333444421 1223333444444444
Q ss_pred HcC----CCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCC
Q 016755 160 RLN----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~ 196 (383)
..| ..+++++||||.+ .||.+|...|.-.++..++..
T Consensus 130 ~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 130 HFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred HhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 334 6889999999999 899999999999999988644
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.06 Score=47.21 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=27.5
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.|++|+++|++++++|+.+...+...+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~ 51 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELL 51 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 34567788999999999999999999888877
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.038 Score=51.59 Aligned_cols=78 Identities=12% Similarity=-0.048 Sum_probs=53.8
Q ss_pred eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 114 s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
..++++|++ .+.+.++. ..+++|+|+.+|+....- ...+ ..+++.|+.++.++.
T Consensus 207 ~lsa~~Fi~-iL~~~l~~----~~ivvG~Df~FG~~r~G~-~~l~--------------------~~~~~~gf~v~~v~~ 260 (297)
T cd02169 207 ALDARIFRK-YIAPALNI----TKRYVGEEPFSRVTAIYN-QTMQ--------------------EELLSPAIEVIEIER 260 (297)
T ss_pred cCCHHHHHH-HHHHHcCC----cEEEEcCCCCCCCcchhH-HHHH--------------------HhcccCCCEEEEecc
Confidence 445678887 66556666 899999999999865444 3222 225667899999888
Q ss_pred CCCccccccccchhhccccccCccc
Q 016755 194 LPKQTHRYTAADEVINSLLDLRPEK 218 (383)
Q Consensus 194 ~~~~~~~~~~a~~vi~~l~e~~~~~ 218 (383)
...++... +++.|++.+.+++...
T Consensus 261 ~~~~g~~I-SST~IR~~l~~G~v~~ 284 (297)
T cd02169 261 KKYDGQPI-SASTVRQLLKEGNLEE 284 (297)
T ss_pred cccCCcEE-cHHHHHHHHHcCCHHH
Confidence 66555554 4477777777777664
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.28 Score=47.89 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC----CCCCChHHHHHHHHHcCCCCCcEE
Q 016755 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----TGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 94 pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~----~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-.....+..|+++|+-++++|-+....+...+.++. +.++--+++. ..-|+.+-++++++++++..+..+
T Consensus 258 k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmv 331 (574)
T COG3882 258 KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMV 331 (574)
T ss_pred HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceE
Confidence 345678888999999999999999888888774443 5666555554 457899999999999999999999
Q ss_pred EEecChhhhHHHHhcCCEEEEecC
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
|++|++...+..+.-+- +.+++.
T Consensus 332 FiDD~p~ErE~vk~~~~-v~Vi~~ 354 (574)
T COG3882 332 FIDDNPAERELVKRELP-VSVIEF 354 (574)
T ss_pred EecCCHHHHHHHHhcCc-eeeccC
Confidence 99999998888888765 444443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.076 Score=48.89 Aligned_cols=14 Identities=43% Similarity=0.586 Sum_probs=12.1
Q ss_pred cEEEEecCCccccc
Q 016755 10 SCVILDLDGTLLNT 23 (383)
Q Consensus 10 k~viFDlDGTL~d~ 23 (383)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 57889999999973
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.03 Score=50.88 Aligned_cols=44 Identities=9% Similarity=-0.167 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEecC
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~~ 193 (383)
..+-.|..+++.++ +++++++||| +.||++|.+.-|+.++.|..
T Consensus 185 ~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 185 PQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred eCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 35566677777766 8999999999 69999999999998888866
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.82 Score=41.57 Aligned_cols=51 Identities=25% Similarity=0.321 Sum_probs=36.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCcccCcEEEeC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGS 141 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~--~~~gl~~~f~~i~~~ 141 (383)
.+.|++.++++.|+++|.+++++||++......... ..+|+.--.+.++++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 367899999999999999999999998754433331 456764333555544
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.1 Score=42.24 Aligned_cols=139 Identities=12% Similarity=0.167 Sum_probs=77.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh--
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-- 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (383)
+-+.|..|||-||.|....|..++. ..+..+++.. ...|......... ..| .+.+...+
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N-~y~D~~lk~~-----di~gwdik~yv~~---~~g----------~i~~il~ep~ 62 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN-IYKDKLLKMS-----DIKGWDIKNYVKP---ECG----------KIYDILKEPH 62 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh-hccccCcChH-----hhcccchhhccCc---cCC----------eeeeeccCcc
Confidence 4568999999999998777766554 2223222211 1111111111000 000 01111111
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCC--ChHHHHH---HHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNS--HRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~--~~~~i~~---~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.+..+.+.|++.+++++|.+. |.++++|.+ .....+. ++.+.+.+-++-..|+|+.-. .-
T Consensus 63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKn-iv------------- 127 (180)
T COG4502 63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKN-IV------------- 127 (180)
T ss_pred hhhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCC-eE-------------
Confidence 223567899999999999987 999999887 2222221 233666766665667776421 11
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
.--++|.|++..++..+...
T Consensus 128 -----kaDilIDDnp~nLE~F~G~k 147 (180)
T COG4502 128 -----KADILIDDNPLNLENFKGNK 147 (180)
T ss_pred -----EeeEEecCCchhhhhccCce
Confidence 12467899998877665443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.43 Score=47.02 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=67.0
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
.+.||+.|-+.+|++.|++..++|+.++-...... +..|++++. ..-+|+--..+.++.+....=+.|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdfi-----------AeatPEdK~~~I~~eQ~~grlVAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFI-----------AEATPEDKLALIRQEQAEGRLVAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhhh-----------hcCChHHHHHHHHHHHhcCcEEEE
Confidence 46789999999999999999999987765444433 667775432 123456666677777777778999
Q ss_pred EecChhhhHHHHhcCCEEEE
Q 016755 171 IEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~ 190 (383)
.||+.||..+..+|.....+
T Consensus 515 tGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 515 TGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred cCCCCCcchhhhhcchhhhh
Confidence 99999999999999885544
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.88 Score=50.64 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=35.1
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
.-|+++||+.||+.|.++|.+.+ ++.. .+..+....||+.|.....+..
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG-~EG~qA~~aSDfaI~~Fr~L~r 920 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISG-QEGRQAVMASDFAMGQFRFLVP 920 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecC-chhHHHHHhhccchhhhHHHHH
Confidence 45999999999999999998866 4432 2222334466888888776543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=91.38 E-value=1.6 Score=39.70 Aligned_cols=49 Identities=10% Similarity=0.309 Sum_probs=37.2
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCcccCcEEEeC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~---~~~i~~~l~~~~gl~~~f~~i~~~ 141 (383)
+.|++.+++++|+++|+++.++||+. ...+...+ +.+|+....+.|+++
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~ 69 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTA 69 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeH
Confidence 45688999999999999999999843 45555666 667876655666655
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=91.05 E-value=1.3 Score=39.93 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=53.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeC----CC----CCCCCC-------ChHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DE----VRTGKP-------SPDI 153 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~----~~----~~~~kp-------~p~~ 153 (383)
.+.+.+|+.++++.|.++++|+.|.|.+-...++..+ +..+....=-.|++- ++ .++.-| +...
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 5788999999999999999999999999999999999 444432211122221 01 011112 1111
Q ss_pred HHH--HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 154 FLE--AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 154 ~~~--~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+.. ..+++ -...+++..||+..|+.|+..+
T Consensus 167 l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 167 LEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred ccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 110 01111 2457899999999999999777
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.58 Score=44.46 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCCh---------HH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHR---------AT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~---------~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++|.+..=|..|.+.||.+.|.||... .+ ++..+ ..+++ .+......-.-...||...+....++
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~v--Pi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGV--PIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCC--ceEEeeeccCCcccCcchhHHHHHHH
Confidence 344455667788888999999888631 11 22233 23333 33444444444688999999988887
Q ss_pred HcC----CCCCcEEEEecCh---------------hhhHHHHhcCCEEE
Q 016755 160 RLN----MEPSSSLVIEDSV---------------IGVVAGKAAGMEVV 189 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~---------------~Di~~a~~aG~~~i 189 (383)
.++ +.-..++++||-. .|+..|.++|+...
T Consensus 182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 664 3344566777632 47888899988653
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.99 E-value=3.5 Score=37.11 Aligned_cols=94 Identities=12% Similarity=0.194 Sum_probs=62.0
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-C-------CCCCCC-------ChHHH
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E-------VRTGKP-------SPDIF 154 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~-------~~~~kp-------~p~~~ 154 (383)
+.+..|+.+++..|..+++|+.+.|.+--..++..+.+..++.+ +..+++-. + .++.+| +-..+
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 45667899999999999999999999988888887755555544 22222211 1 112222 12233
Q ss_pred HHHHHHcC--CCCCcEEEEecChhhhHHHHhc
Q 016755 155 LEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 155 ~~~~~~lg--~~p~e~l~VGDs~~Di~~a~~a 184 (383)
+...+.+. -...++++.||+..|+.|+..+
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 33334333 3567899999999999998765
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.66 E-value=1.1 Score=42.88 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=72.8
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--CCcccCcEEEeCCC------------------------------
Q 016755 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDE------------------------------ 143 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--gl~~~f~~i~~~~~------------------------------ 143 (383)
+..+|..+++.|.+..+.||+...+........+ ++..+|+.++....
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 3348899999999999999999888776663333 57778887765520
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHH-HHhcCCEEEEecCC
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVA-GKAAGMEVVAVPSL 194 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~-a~~aG~~~i~v~~~ 194 (383)
-..+.+.+.....+++.++....+++++||+. .|+.- -+.-|++++.|.+.
T Consensus 283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 01234466778888899999999999999999 46544 45668887776653
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.64 E-value=0.76 Score=42.57 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=39.4
Q ss_pred cEEEEecCCcccccHHHH---HHHHHHHHHHcCC-CCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Q 016755 10 SCVILDLDGTLLNTDGMF---SEVLKTFLVKYGK-EWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN 77 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~---~~a~~~~~~~~g~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (383)
=+++||+||+|+.....+ ..+++.+....|. .++...+..--|.......+.+-..++.+.+++++..
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviq 107 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQ 107 (389)
T ss_pred eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHh
Confidence 378999999999874433 3444444444332 3333333333344444555666677787777766643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=88.44 E-value=0.73 Score=48.81 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.5
Q ss_pred CCchHHHHHHHHHH-CCCCEEEEeCCChHHHHHHH
Q 016755 92 ALPGANRLIKHLSC-HGVPMALASNSHRATIESKI 125 (383)
Q Consensus 92 ~~pg~~~lL~~L~~-~G~~~~i~s~~~~~~i~~~l 125 (383)
+.+.+.+.|+.|.+ .|..++++|+.+...++..+
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~ 549 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWF 549 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHh
Confidence 34566788888888 48999999999988887766
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=88.16 E-value=0.62 Score=42.27 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=20.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFL 35 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~ 35 (383)
|.+|+|+|||||||+++...+.+...+++
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai 31 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTL 31 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHH
Confidence 56899999999999988544433333433
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=88.11 E-value=0.62 Score=42.25 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=20.8
Q ss_pred CCccEEE-EecCCcccccHHHHHHHHHHHHHHc
Q 016755 7 KLMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKY 38 (383)
Q Consensus 7 ~~ik~vi-FDlDGTL~d~~~~~~~a~~~~~~~~ 38 (383)
.++++++ |||||||++....+.+...++++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 3566665 9999999988654444444544443
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=88.10 E-value=3.1 Score=37.27 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=56.5
Q ss_pred EEEeCCC-hHHHHHHHHhhcCCcccCc--EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 111 ALASNSH-RATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 111 ~i~s~~~-~~~i~~~l~~~~gl~~~f~--~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
++||++. -..+...| ..++..+|. .|+++-. .++...|+.+.+++|-+...-++|||+..-..+|+..+++
T Consensus 179 vLVTs~qLVPaLaKcL--Ly~L~~~f~ieNIYSa~k----vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wP 252 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCL--LFRLDTIFRIENVYSSIK----VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWP 252 (274)
T ss_pred EEEEcCccHHHHHHHH--HhccCCccccccccchhh----cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCC
Confidence 4555543 22222223 356766553 4555433 3457899999999999889999999999999999999999
Q ss_pred EEEecCC
Q 016755 188 VVAVPSL 194 (383)
Q Consensus 188 ~i~v~~~ 194 (383)
++-+...
T Consensus 253 Fw~I~~h 259 (274)
T TIGR01658 253 FVKIDLH 259 (274)
T ss_pred eEEeecC
Confidence 9988763
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain | Back alignment and domain information |
|---|
Probab=87.24 E-value=0.66 Score=40.02 Aligned_cols=78 Identities=14% Similarity=-0.033 Sum_probs=49.7
Q ss_pred EeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 113 ~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
...++++|++. +.+.++. ..+++|+|+.+|+....-...+ +...+.|+.+..++
T Consensus 91 a~lsa~~Fi~~-L~~~l~~----~~ivvG~df~FG~~~~G~~~~L---------------------~~~~~~g~~v~~I~ 144 (182)
T smart00764 91 TTLDLRIFRKY-IAPALGI----THRYVGEEPFSPVTAIYNQTMK---------------------QTLLSPAIEVVEIE 144 (182)
T ss_pred hcCCHHHHHHH-HHHHcCc----eEEEEcCCCCCCCCCccCHHHH---------------------HHHhhCCCEEEEEe
Confidence 45578888874 5466666 8999999999997643322221 11235588888887
Q ss_pred CCCCccccccccchhhccccccCcc
Q 016755 193 SLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 193 ~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
+...++.. .+++.+++.+.+++..
T Consensus 145 r~~~~g~~-iSST~IR~~L~~G~v~ 168 (182)
T smart00764 145 RKKANGQP-ISASTVRKLLKEGNLE 168 (182)
T ss_pred cccCCCcE-ECHHHHHHHHHcCCHH
Confidence 75444333 3557777777666543
|
Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.86 E-value=0.87 Score=41.61 Aligned_cols=49 Identities=18% Similarity=0.389 Sum_probs=36.3
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCcccCcEEEeC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl~~~f~~i~~~ 141 (383)
+.|++.++++.|+++|++++++||++... +...+ ..+|+.--.+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence 67899999999999999999999976553 44455 556765333555543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.52 E-value=1.3 Score=47.48 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=24.1
Q ss_pred CchHHHHHHHH-HHCCCCEEEEeCCChHHHHHHH
Q 016755 93 LPGANRLIKHL-SCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 93 ~pg~~~lL~~L-~~~G~~~~i~s~~~~~~i~~~l 125 (383)
.|++.++|+.| ++.|..++++|+.....++..+
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 34566777776 5567788888888888777766
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.51 E-value=5.6 Score=36.47 Aligned_cols=46 Identities=13% Similarity=-0.036 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcC---CEEEEecCC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG---MEVVAVPSL 194 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG---~~~i~v~~~ 194 (383)
.+...++.+++++.....-+++.||...|-.+.+... -.++.+..+
T Consensus 182 ~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 182 SKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred chHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence 3677788888888777777999999999988887775 444444443
|
|
| >PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2 | Back alignment and domain information |
|---|
Probab=86.45 E-value=0.59 Score=39.27 Aligned_cols=80 Identities=24% Similarity=0.315 Sum_probs=49.6
Q ss_pred HHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC---hHHHHHHHHHcCCC
Q 016755 96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS---PDIFLEAAKRLNME 164 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~---p~~~~~~~~~lg~~ 164 (383)
..+-++.|.+.|+...++ ..++++|++.+|.+.+++ ..+++|+|+.+|+.. .+.++.
T Consensus 64 ~~ek~~~l~~~Gvd~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~----~~ivvG~DfrFG~~~~G~~~~L~~-------- 131 (157)
T PF06574_consen 64 LEEKLELLESLGVDYVIVIPFTEEFANLSPEDFIEKILKEKLNV----KHIVVGEDFRFGKNRSGDVELLKE-------- 131 (157)
T ss_dssp HHHHHHHHHHTTESEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE----EEEEEETT-EESGGGEEEHHHHHH--------
T ss_pred HHHHHHHHHHcCCCEEEEecchHHHHcCCHHHHHHHHHHhcCCc----cEEEEccCccCCCCCCCCHHHHHH--------
Confidence 456677778888876554 445778888877446766 899999999999753 333333
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccccc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 202 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~ 202 (383)
.+++.|+.+..++....+...++
T Consensus 132 ---------------~~~~~g~~v~~v~~~~~~~~~IS 154 (157)
T PF06574_consen 132 ---------------LGKEYGFEVEVVPPVKIDGEKIS 154 (157)
T ss_dssp ---------------CTTTT-SEEEEE---EETTEE-S
T ss_pred ---------------hcccCceEEEEECCEEcCCcEeC
Confidence 25667888888888644444443
|
7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.60 E-value=2.8 Score=44.06 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=60.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc--EEEeCCCCCC----------------CCCCh
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRT----------------GKPSP 151 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~--~i~~~~~~~~----------------~kp~p 151 (383)
-+..||+.+.++.++..|+.+.++|+..-...+.+. ...|+...=+ .++-|.++.. ....|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 457899999999999999999999997765555444 5556543222 3344444431 01112
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
.--+.+.+-+.-..+=+.+-||+.||-.+.++|.+...
T Consensus 725 ~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlA 762 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLA 762 (1034)
T ss_pred chHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchh
Confidence 11111222222222335667999999999999987443
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=83.88 E-value=8.5 Score=34.55 Aligned_cols=88 Identities=20% Similarity=0.228 Sum_probs=55.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
...++|++.+.++.++++|+++.++||+.. ..+...+.+.+|+.-..+.++.+. ......+++.. +.
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~---------~~~~~~l~~~~-~~ 81 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG---------SVTKDLLRQRF-EG 81 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH---------HHHHHHHHHhC-CC
Confidence 456789999999999999999999998763 333344534366654445555442 22233333322 23
Q ss_pred CcEEEEecChhhhHHHHhcCCE
Q 016755 166 SSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
..++++|.. ...+.++.+|+.
T Consensus 82 ~~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 82 EKVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred CEEEEECCH-HHHHHHHHcCCc
Confidence 458888853 455666777764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=82.32 E-value=4.6 Score=38.19 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=56.9
Q ss_pred CCCCchHHHHHHHHHHC----CCCEEEEeCCC---hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 90 VKALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~----G~~~~i~s~~~---~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
..+.|++.++++.|+.. |+++.++||+. .......+.+.+|+.--.+.++.+. ......+++++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~ 85 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE 85 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC
Confidence 35689999999999998 99999999986 3333333335677643323333331 13344444442
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
..+++||.+- -...++.+|+..++
T Consensus 86 ---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 ---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred ---CceEEEeChH-HHHHHHHcCCcccc
Confidence 2688898764 56777789987654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.20 E-value=8.5 Score=39.32 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=17.7
Q ss_pred EEEEecChhhhHHHHhcCCEEE
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i 189 (383)
...||...+|+-.=++.|++..
T Consensus 653 YAgFGNR~TDviSY~~VgVP~~ 674 (738)
T KOG2116|consen 653 YAGFGNRITDVISYRQVGVPLS 674 (738)
T ss_pred eeecCCCcccceeeeeecCCcc
Confidence 4558899999999999988643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 383 | ||||
| 1q9s_A | 149 | Crystal Structure Of Riboflavin Kinase With Ternary | 2e-36 | ||
| 1nb0_A | 147 | Crystal Structure Of Human Riboflavin Kinase Length | 2e-36 | ||
| 1n05_A | 163 | Crystal Structure Of Schizosaccharomyces Pombe Ribo | 3e-34 | ||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 5e-31 | ||
| 3bnw_A | 181 | Crystal Structure Of Riboflavin Kinase From Trypano | 2e-17 | ||
| 2x0k_A | 338 | Crystal Structure Of Modular Fad Synthetase From Co | 3e-13 | ||
| 3zug_A | 338 | E268d Mutant Of Fad Synthetase From Corynebacterium | 8e-13 | ||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-11 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 1e-10 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 8e-10 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 7e-09 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 1e-08 | ||
| 1mrz_A | 293 | Crystal Structure Of A Flavin Binding Protein From | 4e-08 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 5e-08 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 6e-08 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 7e-08 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 3e-07 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 3e-07 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 3e-07 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 2i1l_A | 293 | Crystal Structure Of The C2 Form Of Fad Synthetase | 5e-07 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-07 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 1e-06 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 1e-06 | ||
| 2fdr_A | 229 | Crystal Structure Of Conserved Haloacid Dehalogenas | 1e-05 | ||
| 3kzx_A | 231 | Crystal Structure Of A Had-Superfamily Hydrolase Fr | 3e-05 | ||
| 2yy6_A | 213 | Crystal Structure Of The Phosphoglycolate Phosphata | 1e-04 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 3e-04 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 3e-04 | ||
| 2hdo_A | 209 | Crystal Structure Of Putative Phosphoglycolate Phos | 5e-04 |
| >pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary Product Complex Length = 149 | Back alignment and structure |
|
| >pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase Length = 147 | Back alignment and structure |
|
| >pdb|1N05|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Kinase Reveals A Novel Atp And Riboflavin Binding Fold Length = 163 | Back alignment and structure |
|
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3BNW|A Chain A, Crystal Structure Of Riboflavin Kinase From Trypanosoma Brucei Length = 181 | Back alignment and structure |
|
| >pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From Corynebacterium Ammoniagenes Length = 338 | Back alignment and structure |
|
| >pdb|3ZUG|A Chain A, E268d Mutant Of Fad Synthetase From Corynebacterium Ammoniagenes Length = 338 | Back alignment and structure |
|
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|1MRZ|A Chain A, Crystal Structure Of A Flavin Binding Protein From Thermotoga Maritima, Tm379 Length = 293 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|2I1L|A Chain A, Crystal Structure Of The C2 Form Of Fad Synthetase From Thermotoga Maritima Length = 293 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229 | Back alignment and structure |
|
| >pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231 | Back alignment and structure |
|
| >pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
| >pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 1e-85
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA P + + + +I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A
Sbjct: 23 MAAPPQPV-THLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQ 81
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
II++ LP +K E V E + + +PGA +LI HL HG+P ALA++S A+
Sbjct: 82 IIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSAS 141
Query: 121 IESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVI 176
+ K S + FS IV D EV+ GKP PDIFL AKR + P+ LV ED+
Sbjct: 142 FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPN 201
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
GV A AAGM+VV VP T A V+NSL D +PE +GLP ++
Sbjct: 202 GVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 1e-65
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++ +I D+DG L +T+ + + +FL + G D +G + I+ D
Sbjct: 2 NAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRD 61
Query: 66 YGLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E + ++ K P +++ + G+ + LAS+S +A I
Sbjct: 62 EYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFR 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ ++ F +++ +E + KP+P+I+L A K+LN++ S +L+IEDS G+ AG A
Sbjct: 122 ALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
A +EV A+ + +AA +++SL D+
Sbjct: 181 ADVEVWAIRD-NEFGMDQSAAKGLLDSLTDV 210
|
| >1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* Length = 163 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 2e-65
Identities = 74/168 (44%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 210 SLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV 269
+L + RPE G E P G VV G GRGSK LGIPTAN+S + ++
Sbjct: 4 NLEEKRPEIVG-------PEKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQEL 56
Query: 270 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLV 329
L SGVYFG+A + R V+ MVMS+GWNPY+ N ++ E L+ EDFY+E + ++
Sbjct: 57 LRYRDSGVYFGYAMVQKR-VFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVI 115
Query: 330 IVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 377
++GYIRPE N+ L+ LI IH D +VA ++D P YS Y+ DP+ K+
Sbjct: 116 VLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFKV 163
|
| >1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* Length = 147 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 2e-65
Identities = 67/142 (47%), Positives = 102/142 (71%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 64 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123
Query: 356 VAERALDLPLYSKYRDDPYLKI 377
A++ L+LP Y K ++D + ++
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQV 145
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 1e-63
Identities = 49/229 (21%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
V+ D+DG L ++ +E + ++G E + G+T I+ A
Sbjct: 26 VLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDA 85
Query: 72 KHEFVNEVYSMFSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E + +Y ++ K + +PGA ++ + G+ + + S + ++ ++++
Sbjct: 86 TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHN 145
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+++V + +V+ GKP+P+ +L A K+ +P+ +LVIE++ +GV AG AAG+
Sbjct: 146 FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFT 205
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE 235
+AV + L A+ + +S+ D + W + ++ L +
Sbjct: 206 IAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNW------ETLQSALKQD 247
|
| >3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} Length = 181 | Back alignment and structure |
|---|
Score = 194 bits (494), Expect = 3e-61
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 224 FQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGY-SDVLSEHPSGVYFGWA 282
+ T +P+++ G VV G GRG LG PTAN+ + + L + + V +GW
Sbjct: 5 HHHHMRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWG 64
Query: 283 GLSTR--------GVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 334
+S G Y SIG+N FD T+EP+ LHEF DFY + ++++G I
Sbjct: 65 TVSQVPGKERESFGPYPFAASIGFNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEI 124
Query: 335 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITSSK 381
R +F SL+ L+ I D + L P ++ + SS
Sbjct: 125 RSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFESPSST 171
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 7e-60
Identities = 50/218 (22%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
++K + V+ D+DG L N+ SE + +G + E + G+T I
Sbjct: 17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + A E + +Y S + + +PGA L++ + G+ + + S +
Sbjct: 77 VFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ ++ + ++V + +V+ GKP+P+ +L A K+ ++ ++VIE++ +GV
Sbjct: 137 LSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGV 196
Query: 179 VAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
AG AG+ +AV + L Q AD + S+ L
Sbjct: 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 7e-59
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP- 69
I D+DG L++++ ++ + G + R + +G +
Sbjct: 12 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 71
Query: 70 CAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
++ E V V + + + LPG + G+ + LAS S +E ++
Sbjct: 72 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT-M 130
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M
Sbjct: 131 FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 190
Query: 189 VAVPSLPKQTH-RYTAADEVINSLLDLRPEK 218
+ VP+ Q R+ A+ ++SL +L +
Sbjct: 191 IVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 2e-58
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYG 67
V+ DLDG L+ ++G+ ++V ++ L + G D E G+ A + + +
Sbjct: 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHD 87
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
+F++ + + F+ + V A+ GA ++ L GVP A+ SNS R + K+
Sbjct: 88 FVPP-PDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR- 145
Query: 128 QHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
G E + S GKP PD++ AA++L + P +VIEDSV G AG AAG
Sbjct: 146 VAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAG 205
Query: 186 MEVVAV--PSLPKQTH----RYTAADEVINSLLDLRP--EKWGLP 222
+ + P P A V+ S +LR + GL
Sbjct: 206 ATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLL 250
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 5e-54
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ G + + I++
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV 64
Query: 71 AKHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ EF N+ Y + PG +L+K L + + +ALAS S +
Sbjct: 65 SAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLE 124
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K +
Sbjct: 125 ---RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
G + V ++ E
Sbjct: 182 GALPIGVGR----PEDLGDDIVIVPDTSHYTLEF 211
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 4e-53
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + +D ++ G + E I+ G
Sbjct: 5 VIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETK 64
Query: 72 -----KHEFV---NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
K E + N Y M L LPG RL+ L + + LAS+S A
Sbjct: 65 YTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP--- 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
KI + + F IV + GKP PDIFL AA L++ P+ IED+ G+ A K+
Sbjct: 122 KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS 181
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
AGM V V AD V+ DL E
Sbjct: 182 AGMFAVGVGQ----GQPMLGADLVVRQTSDLTLEL 212
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 2e-51
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 9 MS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVE 64
MS +I D DG L++++ + ++V L + G E + G T +
Sbjct: 1 MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES 60
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ +P +++ + L + VK + G + L P + SNS ++
Sbjct: 61 EASIP-LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDM 116
Query: 124 KISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
++ + G F+ + S + KP PDIFL A + + P +V+EDSV G+
Sbjct: 117 MLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHG 175
Query: 181 GKAAGMEVVAVPSLP------KQTHRYTAADEVINSLLDLRPEKWG 220
+AAGM V+ A+ VI+ + DL P
Sbjct: 176 ARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIA 220
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 3e-51
Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 12/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
I DLDGTL ++ K L H+ +G + + + G+
Sbjct: 9 FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSIT 68
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
+ + Y + ALPGA L++ L + +A++ T +
Sbjct: 69 DEQAERLSEKHAQAYERLQHQ---IIALPGAVELLETLDKENLKWCIATSGGIDTATINL 125
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
+ + IV D+V GKP PD+FL AAK++ LVI D++ ++A +
Sbjct: 126 K-ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184
Query: 186 MEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
V + S A V LDL
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDLLN 217
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 3e-50
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 21/226 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M L+ VI DLDG + +T + + + + G D + + G + E
Sbjct: 1 MVMKLQ----GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLR 56
Query: 61 IIVEDYGLP--------CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
I++ G N +Y L LPG L+ L + + L
Sbjct: 57 RILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
AS S A E F+ + +++ KP P+IFL A L + P + + IE
Sbjct: 117 ASVSLNAPTILA---ALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIE 173
Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
D+ G+ A A+GM V + + T A ++ S L +
Sbjct: 174 DAQAGIDAINASGMRSVGIGA------GLTGAQLLLPSTESLTWPR 213
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 5e-50
Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 14/227 (6%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
+PL ++ + D+DGT++ + + + F H G + A
Sbjct: 28 TKPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAK 87
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALASNSHRAT 120
D+ ++ E+ + +H +PGA +L L+ A+A++ R
Sbjct: 88 FAPDFADEEYVNKLEGEIPEKYGEH---SIEVPGAVKLCNALNALPKEKWAVATSGTRDM 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-------MEPSSSLVIED 173
+ + + +++V+ GKP P+ +L+ L S +V ED
Sbjct: 145 AKKWF--DILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 202
Query: 174 SVIGVVAGKAAGMEVVAVPS-LPKQTHRYTAADEVINSLLDLRPEKW 219
+ G+ AGKAAG ++V + + + D ++ + +R ++
Sbjct: 203 APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-35
Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 16/201 (7%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ +ILD GT ++ + + G E E + +G E ++ +
Sbjct: 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSR 73
Query: 68 LP---------CAKHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALA 113
+ + E + +Y +F+ + + +PG + L G+ +
Sbjct: 74 IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGN 133
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIE 172
+ + + + + V + +V G+P PD+ L+ A L + + + ++
Sbjct: 134 TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVD 193
Query: 173 DSVIGVVAGKAAGMEVVAVPS 193
D++ G+ G AGM V V
Sbjct: 194 DTLPGIEEGLRAGMWTVGVSC 214
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-30
Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 43/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL- 68
VI GT ++ EV K G E K +G ++ + E +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67
Query: 69 --------PCAKHEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASN 115
+ E+Y F + L + G +I L G+ + +
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 116 SHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIED 173
R ++ + +V D+V G+P P + + A L + P + + + D
Sbjct: 128 YTREMMDIVAK-EAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186
Query: 174 SVIGVVAGKAAGMEVVAVPS-------LPKQTHRYTA------------------ADEVI 208
+V + G+ AGM V V ++ + A I
Sbjct: 187 TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246
Query: 209 NSLLDLRP 216
++ +L
Sbjct: 247 ETMQELES 254
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Query: 12 VILDLDGTLLNT-DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
VI D TL++T + L + G + + + + + + I +
Sbjct: 28 VIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDS---IPNSTIPKYLITLLGKRWKE 84
Query: 71 AKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
A + N + S SD+ GA L+ L + + MA+ SN + + +
Sbjct: 85 ATILYENSLEKSQKSDN---FMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHK 140
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEV 188
F I+GS + T KPSP+ L A +N+EPS I DS+ + + AG
Sbjct: 141 NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP 200
Query: 189 VAVP--SLPKQTHRYTAADEVINSLLDL 214
+ ++ K + ++ N + L
Sbjct: 201 IKYGSTNIIKDILSFKNFYDIRNFICQL 228
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 4e-30
Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 14/189 (7%)
Query: 7 KLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
K M I DL GTLL+ + L YG D ++ + + +E
Sbjct: 2 KGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVS----TPFAIE 57
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ E E Y G + L++ +S G L S+ + +E
Sbjct: 58 TFA---PNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE- 113
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
I + F+ +V S KP+P+ L ++ + LVI D I + AG+A
Sbjct: 114 -ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQA 170
Query: 184 AGMEVVAVP 192
AG++
Sbjct: 171 AGLDTHLFT 179
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 15/208 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPC 70
I DLDGTLL++ ++ ++ +D + + + K +++ + ED L
Sbjct: 7 FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL-- 64
Query: 71 AKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQ 128
E +N+V + +V +PGA ++ G+ + ++ + A I
Sbjct: 65 -DVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF---TILKD 120
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F+ I+ S KPSP+ + + ++ I D + V + +G++
Sbjct: 121 LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 180
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRP 216
+ + I +L D+
Sbjct: 181 INF------LESTYEGNHRIQALADISR 202
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-29
Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 19/224 (8%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLP 69
+ D D TL ++ ++ L ++G + + +GK LEE+ I+
Sbjct: 8 VYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGK-TLEESFSIL----TG 62
Query: 70 CAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIES 123
+ + +S P + HL G+ + + S +
Sbjct: 63 ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL-- 120
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
H ++ F +I+G ++V KP P+ L A RL P L I DS + A
Sbjct: 121 SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180
Query: 184 AGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 222
AG+ V S Q + D +I++L L +K G P
Sbjct: 181 AGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-28
Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP 69
++ D+DGTL N+ ++ V++ L YGK + + K + E G+
Sbjct: 6 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA----EQAMTE-LGIA 60
Query: 70 CAKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISY 127
++ + Y + + H +++ PG L + L + + + ++
Sbjct: 61 ASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQRRNELE--SGMR 117
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
+ + +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 118 SYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177
Query: 188 VVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
P H+ LD+
Sbjct: 178 FGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206
|
| >2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Length = 338 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-28
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG------- 288
+Y+ GPVV+G GRG K LG PTAN + GVY GW +
Sbjct: 186 HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALP---ADGVYAGWLTILPTEAPVSGNM 242
Query: 289 ----VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLE 344
Y +S+G NP F + ++++E ++L + D D Y ++ + V ++R F S+E
Sbjct: 243 EPEVAYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSVE 301
Query: 345 TLIAKIHEDRKVAERAL 361
L+ + +D + L
Sbjct: 302 QLLEVMAKDVQKTRTLL 318
|
| >3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Length = 308 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-27
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 294
P G VV G RG +G PTANL + + P GVY + + Y+ +
Sbjct: 189 PLPSRGMVVHGNARGRT-IGYPTANLVLLDRTYM----PADGVYVVDVEIQRQ-KYRAMA 242
Query: 295 SIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDR 354
S+G N FD E E + +F++D Y E + + + IR F S++ L+ ++ D
Sbjct: 243 SVGKNVTFDGEEARFEVNIF-DFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADE 301
Query: 355 KVAER 359
+V
Sbjct: 302 EVTRN 306
|
| >1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Length = 293 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 294
+ I G V K G K LG PTAN+ V GVY L VM
Sbjct: 159 YFEIEGIVHKDREFGRK-LGFPTANIDRGNEKLVD---LKRGVYLVRVHLPDGKKKFGVM 214
Query: 295 SIGWNPYFDNAEK-TIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHED 353
++G+ P +A E ++L +F+ D Y + L L ++ ++R E F S+E L A I +D
Sbjct: 215 NVGFRPTVGDARNVKYEVYIL-DFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQD 273
Query: 354 RKVAERALDLPLYSKYRDD 372
K A +D + SK+ +
Sbjct: 274 VKSARNMIDDIINSKFEKE 292
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-27
Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 17/224 (7%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 4 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHG-VPMALASNSH 117
GL A+ + ++ + + L G L+ LS V + L + +
Sbjct: 61 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 120
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDS 174
A+ K+ G + F +D+ P I LE A+R+ N PS ++I D+
Sbjct: 121 EASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDT 179
Query: 175 VIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
+ + +AV + + + + +
Sbjct: 180 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-25
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 24/226 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG---------------KEWDGREKHKIVGKTP 55
V D+ TLL+ + M E G + R + +
Sbjct: 6 LVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKV 65
Query: 56 LEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L + + + E V + ++ + L G ++ + G+ A+
Sbjct: 66 LTGSQEALAGKLKVD---VELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIG 122
Query: 115 N---SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N + + + G E +DEV + KP ++F + ++P SL I
Sbjct: 123 NVMFWPGSYTRLLLE-RFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI 181
Query: 172 EDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
D+ + GM V + + + I S+ +L+
Sbjct: 182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKD 227
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-25
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
L + V+ DLDGTL ++ ++ +K L K+ + + +K VG PL+ + +E
Sbjct: 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGP-PLKTS--FMEY 58
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
Y E + D+ + + K G L+ L +G + +A++
Sbjct: 59 YNFD---EETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVF 115
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
+ +I F IVGS D+ A + LN++ +++I D V+
Sbjct: 116 SK--QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVI 173
Query: 180 AGKAAGMEVVAV 191
+ + V
Sbjct: 174 GALKNNLPSIGV 185
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-25
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 22/206 (10%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+DGTL F+ + + + + P +E+A A
Sbjct: 9 WVFDMDGTLTIAVHDFAAIREAL----SIPAEDDILTHLAA-LPADESA----------A 53
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
KH ++ E + + PGA L++ L+ G + + + + R + G
Sbjct: 54 KHAWLLEHERDLAQGS---RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLE-AIGL 109
Query: 132 NESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ F+ V + KP P L+ A+ ++ PS +++ D + G+AAG V
Sbjct: 110 ADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169
Query: 191 VPSLPKQTHRYTAADEVINSLLDLRP 216
V D LR
Sbjct: 170 VN--LPDNPWPELTDWHARDCAQLRD 193
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 5e-25
Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 21/220 (9%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GKTPLEEA 59
+ DLD TL++T + K + + + +
Sbjct: 5 IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFD- 63
Query: 60 AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHR 118
++ LP ++++ + + ++ +PGA +++ L G + + ++ +
Sbjct: 64 -YLLRRLDLP-YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
KI + ++ F ++ SD KP P IF +A K N++P +L++ D +
Sbjct: 122 VKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSD 180
Query: 178 VVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 214
+ K GM+ V ++ AD I++L L
Sbjct: 181 IYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 8e-24
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ L+ +GV + SN + I + N ++ S E+ KP
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPE 76
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
F AA +++ ++++DS++ V AG+ V + A I
Sbjct: 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVG 129
Query: 211 LLDLRPE 217
L L E
Sbjct: 130 LFGLEGE 136
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-23
Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 34/217 (15%)
Query: 9 MSCVILDLDGTLLNTDG----------MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE 58
+ + D+ G LL F F ++ E G+ L E
Sbjct: 4 IKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELEL----GRMTLAE 59
Query: 59 A-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
+V +F + + P L + L M +N
Sbjct: 60 YLEQVVFYQPRDFTPEDFRAVMEEQS-------QPRPEVLALARDLG-QRYRMYSLNNEG 111
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E +I G E S + KP+P ++ + P +++++D +
Sbjct: 112 RDLNEYRIR-TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQN 170
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
V A +A GM + A ++ L L
Sbjct: 171 VQAARAVGM----------HAVQCVDAAQLREELAAL 197
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 6e-23
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 22/217 (10%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYG 67
+ ++ DLDGTL+++ + L+ L + G E + K +G ++E
Sbjct: 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGG----VRALLEK-V 57
Query: 68 LPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATI 121
L +F E +F H + K P ++ L G +A+ SN +
Sbjct: 58 LK---DKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
KI + F +IVG D KPSP L+ + L EP +L++ D+ + AG
Sbjct: 115 --KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
K AG + + + D ++ DL
Sbjct: 173 KRAGTKTALALWGYVKLNSQI---PDFTLSRPSDLVK 206
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 9e-23
Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 34/216 (15%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-------------WDGREKHKIVGKTPLEE 58
I DL +++ D F+ VL + + E+ +I +
Sbjct: 10 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEI---SDEAF 64
Query: 59 AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
A + + LP + +F + ++F P ++ L G + + SN++R
Sbjct: 65 AEALCHEMALPLSYEQFSHGWQAVFVA------LRPEVIAIMHKLREQGHRVVVLSNTNR 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ I S ++ KP I+ + PS ++ +D+ +
Sbjct: 119 LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNI 178
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
G+ + + + +
Sbjct: 179 EGANQLGI----------TSILVKDKTTIPDYFAKV 204
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 9e-23
Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 31/234 (13%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG--------------------KEWDGREKHKI 50
+ D+ TLL E T +G +
Sbjct: 3 LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62
Query: 51 VGKTPLEEAAI--IVEDYGLPCAK--HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH 106
+ + G+ A+ ++Y FS C + L GA ++
Sbjct: 63 LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP-CTWQVLDGAEDTLRECRTR 121
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G+ +A+ SN +E + G E F ++ S+ KP P IF EA + +MEP
Sbjct: 122 GLRLAVISNFD-RRLEGILG-GLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV 179
Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINSLLDLRP 216
+ + D+ + +A GM V +L + ++ SL L P
Sbjct: 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-22
Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M + + V+ DLDGTL + ++ ++ L +G + D + +G PL +
Sbjct: 25 MKKNYE----IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGP-PLHDT- 78
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN 115
E Y + E + ++ + + K +++ L +G + +A++
Sbjct: 79 -FKEYYKFE---DKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATS 134
Query: 116 -SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-EPSSSLVIED 173
I + F I GS+ T ++ N+ + +++ D
Sbjct: 135 KPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD 192
Query: 174 SVIGVVAGKAAGMEVVAV 191
++ K G++ + V
Sbjct: 193 RKYDIIGAKKIGIDSIGV 210
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 3e-22
Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 24/217 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT------PLEEA----- 59
V++D TL+ +F E + L G + D R+ + K P E+
Sbjct: 5 AVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVD 64
Query: 60 -AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ G+ V E+ ++ L +G +AL SN+
Sbjct: 65 PKDFLYILGIY-PSERLVKELKEADIRDGE-AFLYDDTLEFLEGLKSNGYKLALVSNAS- 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
+++ + + + F + S E++ KP+P IF A ++ ++ + D
Sbjct: 122 PRVKTLLE-KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---AVHVGDIYELD 177
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ K + ++ + + + Y + + +L +
Sbjct: 178 YIGAKRSYVDPILL----DRYDFYPDVRDRVKNLREA 210
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 3e-22
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 28/235 (11%)
Query: 6 KKLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------ 51
L V DLD TL++T G + + ++ +E+ +I+
Sbjct: 13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 72
Query: 52 ---GKTPLEEA-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKH 102
T + + +++ + E Y ++ + + ++
Sbjct: 73 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162
L V + L +N R T KI F IV E + KP+P IF L
Sbjct: 133 LR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG 190
Query: 163 MEPSSSLVIEDSVIG-VVAGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 214
++P +++ D++ + G AG++ V S +++S+L+L
Sbjct: 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 6e-22
Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 14/218 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGK---TPLEEAAIIVEDY 66
+ DLDGTL+N+ + + + L +G + A
Sbjct: 25 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 84
Query: 67 GLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRAT 120
+ F + + P ++ L G +A+ +N +
Sbjct: 85 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I G + FS ++G + KP P F + + P L + DS + A
Sbjct: 145 Q--PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFA 202
Query: 181 GKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+AG VV + + D + + D+
Sbjct: 203 AHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 7e-22
Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 20/192 (10%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
++ + DLDGTL+++ + G + +G PLE +
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGP-PLESS---FAT 57
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
L + ++E ++ + + + + P L++ LS P+ + +
Sbjct: 58 C-LS---KDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELS-SSYPLYITTTKDTST 112
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
++ + F I GS D+ +A + + P +++I D+ ++
Sbjct: 113 AQ--DMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDML 168
Query: 180 AGKAAGMEVVAV 191
+ G++ +A+
Sbjct: 169 GARETGIQKLAI 180
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 9e-22
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 36/223 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEE-AA 60
++ DL G L++ + E ++ F + + + G+ EE
Sbjct: 8 IVFDLGGVLIHLN--REESIRRFKAIGVADIE-EMLDPYLQKGLFLDLESGRKSEEEFRT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ G + + + + + + L SN++
Sbjct: 65 ELSRYIGKELTYQQVYDALLGFLEE-------ISAEKFDYIDSLRPDYRLFLLSNTNPYV 117
Query: 121 IESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
++ +S + + F + S ++ KP+ DIFLE M+P +L I+D
Sbjct: 118 LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGP 177
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
V + G T+ + I ++ L E+
Sbjct: 178 ANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 2e-21
Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIV----------GKTPLEE 58
++ D+D T+L+ + L+ D + ++K + GK +E
Sbjct: 9 TLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDE 68
Query: 59 A-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
+ ++++YG + Y F + ++ + GA LI +L + +
Sbjct: 69 VVNTRFSALLKEYGYEADGALL-EQKYRRFLEEGHQL--IDGAFDLISNLQ-QQFDLYIV 124
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
+N T ++ G F I S++ KP + F +R+ +L+I
Sbjct: 125 TNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIG 183
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
DS+ + G+ AG++ + K I L +L
Sbjct: 184 DSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 2e-21
Identities = 47/233 (20%), Positives = 81/233 (34%), Gaps = 30/233 (12%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG----------KEW--DGREK-------HKIV 51
I D+DGT+L+T + L + G K + G ++
Sbjct: 6 AAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAG 65
Query: 52 GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCH 106
A ++ VN V +F + K PG L+K+L
Sbjct: 66 SSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQK 125
Query: 107 GVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165
GV +A+ SN + A + + SF +G KP+PD+ E K L +
Sbjct: 126 GVKLAVVSNKPNEAVQVLV---EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPR 182
Query: 166 SSSLVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+ I DS I + + + M+ +AV + A ++++ L
Sbjct: 183 DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 85.0 bits (210), Expect = 1e-19
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149
+ PGA +K L G+P A A + ++ + G P
Sbjct: 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWP 88
Query: 150 SPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 192
PD A LN+ ++I + +G AG+ + +
Sbjct: 89 QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-18
Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 25/223 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG------------------KEWDGREKHKIVGK 53
V D GTL + +G LK G + +
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY--- 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMAL 112
PL + V ++ + + + L P ++K L + +
Sbjct: 62 RPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLK-GKYHVGM 120
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
++S + + G + F I S+E KP P IF A K+ ++ ++ +
Sbjct: 121 ITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVG 179
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + K GM + + ++ + D +++ L ++
Sbjct: 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 3e-17
Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 26/226 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--------------------WDGREKHKI 50
+ DLD T+ + + KY + W + K+
Sbjct: 7 NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVP 109
K L + F + K +P A ++++L+
Sbjct: 67 -TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYN 124
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + SN R K+ G + F I+ S+++ KP P+IF A E SL
Sbjct: 125 LYILSNGFRELQSRKMR-SAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183
Query: 170 VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I DS + GM + + I+SL +L
Sbjct: 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQ-PTYHIHSLKEL 228
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 4e-17
Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 36/216 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEEA-A 60
+++DL G L+N D ++ F K G + + G E
Sbjct: 31 LLIDLGGVLINLD--RERCIENFK-KIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRD 87
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I E G + + S D +P + + L SN++
Sbjct: 88 GIREMMGKMVSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVVYLLSNTNDIH 140
Query: 121 IE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
+ + + F S E++ KP P+IF + ++P + I+DS
Sbjct: 141 WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSE 200
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211
I + G+ T+ A ++ +
Sbjct: 201 INCKVAQELGI----------STYTPKAGEDWSHLF 226
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 76.4 bits (187), Expect = 1e-15
Identities = 30/245 (12%), Positives = 66/245 (26%), Gaps = 46/245 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA--------AIIV 63
+ LD + + +++ + + + K T +E +
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ + + ++ + L+ L G + +A+
Sbjct: 193 DVEK-----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 124 KISYQHGWNESFSV--IVGSDEVRT-----------GKPSPDIFLEAAKRLN-------- 162
G F I + +V GKP+P ++ A N
Sbjct: 248 PFE-NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306
Query: 163 ------MEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSL 211
+ ++ DS+ +++ + G + AD VIN L
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
Query: 212 LDLRP 216
+LR
Sbjct: 367 GELRG 371
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 2e-15
Identities = 44/231 (19%), Positives = 79/231 (34%), Gaps = 28/231 (12%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKE--------WDGREKHKIVGKT 54
K+L+ + D D TL + + F EV K + L YG +I+G
Sbjct: 5 KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYG 64
Query: 55 PLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHG-VP 109
+VE + + ++ + L ++ LPG +K L G
Sbjct: 65 AKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYK 124
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ +A+ E+K+ + G + F I + + +L L + PS L
Sbjct: 125 LVVATKGDLLDQENKL-ERSGLSPYFDHIEVMSD-----KTEKEYLRLLSILQIAPSELL 178
Query: 170 VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEV-----INSLLDL 214
++ +S + + G V +P H T + L DL
Sbjct: 179 MVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 8e-15
Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 17/216 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREK-------HKIVGK-TPLEEAA 60
+ DL GTL + + + F + W R+K ++ + ++A
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALW--RQKQLEYTWLRSLMNRYVNFQQAT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ + S D ++ ++ L G+ +A+ SN +
Sbjct: 65 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I++ +S+ G + F ++ D V+ KP ++ A + L ++ S+ L + +
Sbjct: 125 IDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATG 183
Query: 181 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
+ G + + D + SL +
Sbjct: 184 ARYFGFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 1e-14
Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 20/215 (9%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---EKHKIVGKTPLEEAAIIVEDYG 67
+ D D TLL+ D + +++ + ++G + R + + + ++ Y
Sbjct: 13 VFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYR 72
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
L + + + S D+ + PGA ++HL G P + S+ KI+
Sbjct: 73 LEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA- 130
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-GM 186
+ G + + ++ L+ ++++D + + A K A G
Sbjct: 131 RSGLWDEV------EGRVLIYIHKELMLDQVMEC-YPARHYVMVDDKLRILAAMKKAWGA 183
Query: 187 EVVAV-------PSLPKQTHRYTAADEVINSLLDL 214
+ V PK+ + AD + + DL
Sbjct: 184 RLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 4e-14
Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKH-------KIVGK-TPLEEAA 60
+ D GTLL+ W R++ ++ + +
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLW--RQRQLEYSWTRTLMHQYADFWQLT 74
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ L E + ++ A P A ++ L G +A+ SN +
Sbjct: 75 DEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEM 134
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+++ + + + +D+++ KP P I+ A RL + P+ + + +
Sbjct: 135 LQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGG 193
Query: 181 GKAAGMEVVAVP-SLPKQTHRYTAADEVINSLLDL 214
G V + + + +NSL +L
Sbjct: 194 AGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 2e-13
Identities = 30/227 (13%), Positives = 65/227 (28%), Gaps = 12/227 (5%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---DGREKHKIVGKTPLE 57
A P + D+D L + ++++ ++++ + + H + E
Sbjct: 49 SATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKE 108
Query: 58 EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL----- 112
I N + +K ++ L G L
Sbjct: 109 YGLAIRGLVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTN 168
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVI 171
A +H + ++ + KP F +A K + + I
Sbjct: 169 AYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFI 228
Query: 172 EDSVIGVVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDLR 215
+DS + G GM+ + + + VI+ +L+L
Sbjct: 229 DDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 4e-13
Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 33/234 (14%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEW-----------DGREKHK---IVGKT 54
V+ D GTL + + + + + + W ++ V +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L GL + F+ ++ ++ A L + A+ S
Sbjct: 65 ALAYTL---GTLGLEPDE-SFLADMAQAYNRLTPYPDAAQCLAEL------APLKRAILS 114
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174
N +++ ++ G +SF ++ D R KP PD + + L + P+ L + +
Sbjct: 115 NGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173
Query: 175 VIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
V K G V V +L ++ T A + L +R E + P
Sbjct: 174 GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 67.9 bits (165), Expect = 4e-13
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 6/136 (4%)
Query: 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVG 140
F+ K + ++ G+ + + S+ + + + E
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF- 180
Query: 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQT 198
D K + + + A + ++ L + D A + A + V V P T
Sbjct: 181 -DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLT 239
Query: 199 HRYTAADEVINSLLDL 214
+I S +L
Sbjct: 240 DDEKTYYSLITSFSEL 255
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 66.6 bits (162), Expect = 1e-12
Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 32/239 (13%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGR------------ 45
+AQ + + V D D TL ++ + F L Y D R
Sbjct: 5 IAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRN 64
Query: 46 -EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHL 103
+ K + + + + + L V+ + G + +
Sbjct: 65 LKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAI 124
Query: 104 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163
+ + L + E KI Q G ++ F I + P + ++
Sbjct: 125 A-ADYAVVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDL 177
Query: 164 EPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-------INSLLDL 214
++I +S+ V A G + P H +
Sbjct: 178 PAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 6e-12
Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 18/143 (12%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD--- 142
+V A ++ + G A+ SN S I+ ++ G + F I S+
Sbjct: 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSEL 90
Query: 143 -EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AV 191
+ KP IF L ++ + ++++ ++ ++ AG+ +
Sbjct: 91 QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150
Query: 192 PSLPKQTHRYTAADEVINSLLDL 214
LP + + + +
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEA 173
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-11
Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-------------------KHKIVG 52
+ D GTL++ + L+ + GK + E ++ +
Sbjct: 9 LTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDIL 68
Query: 53 KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
+ + A +++GL E F + A P +++L + +
Sbjct: 69 RAVYDRIA---KEWGLEPDAAER-----EEFGTSVKNWPAFPDTVEALQYLK-KHYKLVI 119
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF---LEAAKRLNMEPSSSL 169
SN R + + F I+ + +V + KP+P+ F ++A + +E L
Sbjct: 120 LSNIDRNEFKLSNA---KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDIL 176
Query: 170 VIEDSVIG-VVAGKAAGMEVV--------AVPSLPKQTHRYTAADEVINSLLDL 214
+S+ + AG+ R D NS+ ++
Sbjct: 177 HTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+ GT+L+T + E L +Y K+ + I++ G
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQL-EYTWLLTIMGKYVEFEEITKITLRYILKVRGEESK 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
E + + +KA L + + SN ++ + ++G
Sbjct: 63 FDEEL--------NKWKNLKAYEDTKYLKEISEIA--EVYALSNGSINEVKQHLE-RNGL 111
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
F I ++ V+ KPSP ++ + + ++ + V+ K AGM + V
Sbjct: 112 LRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFV 169
Query: 192 --PSLPKQTHRYTAADEVINSLLDL 214
+ D ++N +L
Sbjct: 170 NRKNTIVD-PIGGKPDVIVNDFKEL 193
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 3e-08
Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 46/188 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W + + +
Sbjct: 23 MARLPKLAVFDLDYTL---------------------WPFWVDTHVDPPFHKSSDGTVRD 61
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
G V+ P ++K L GVP A AS + ++
Sbjct: 62 RRG--------------------QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQ 101
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F F ++ + S + +D +V
Sbjct: 102 LLELFDLFRYFVHREIYPG-----SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKL 156
Query: 185 GMEVVAVP 192
G+ + +
Sbjct: 157 GVTCIHIQ 164
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 205
KP P + L A L+++ ++S ++ D + + A AA + V V + P AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 191 WVLNSLADL 199
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-07
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 203
KP P ++ + A+R +++ + + DS+ + A AG V +
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160
Query: 204 ADEVINSLLD 213
V L
Sbjct: 161 GTRVCEDLAA 170
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 8e-07
Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 22/205 (10%)
Query: 12 VILDLDGTLL--NTDGMFSEV----------LKTFLVKYGKEWDGREKHKIVGKTPLEEA 59
+ DLDG L G+ L K G +G + G+ L +
Sbjct: 6 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGP--EGATTRLMKGEITLSQW 63
Query: 60 AIIVEDYGLPCAKHEFVN-----EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
++E+ C++ V + +F + K + L G A+ +
Sbjct: 64 IPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILT 123
Query: 115 NS---HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N+ RA + F ++ S +V KP P I+ L PS + +
Sbjct: 124 NTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFL 183
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPK 196
+D + + GM + V
Sbjct: 184 DDIGANLKPARDLGMVTILVQDTDT 208
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 1e-06
Identities = 67/460 (14%), Positives = 128/460 (27%), Gaps = 138/460 (30%)
Query: 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII 62
QP KL ++ + DG+ G GKT + A +
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVL----------------G------SGKTWV--ALDV 170
Query: 63 VEDYGLPCAKHEFVNEVYSM-FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
Y + C +++ + + L +L+ + + + S++ + I
Sbjct: 171 CLSYKVQCK---MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 122 ESKI----------SYQHG-------WN----ESFSV---IVGSDEVRTGKPSPDIFLEA 157
S Y++ N +F++ I+ + T FL A
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL----LTTRFKQVTDFLSA 283
Query: 158 A--KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215
A ++++ S + D V ++ K +P T+ + +I +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLL-KYLDCRPQDLPREVLTTNPRRLS--IIAESIRDG 340
Query: 216 PEKW------GLPPFQDWIEGTL----PSE--PWY-----------IGGPVVKGLGRGSK 252
W IE +L P+E + I P +
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI--P--------TI 390
Query: 253 VLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP 311
+L + ++ V+++ H + ST + + Y + K
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--------YLELKVKLENE 442
Query: 312 WLLH-----------EFD-EDFYDEEL----------HLVIVGYIRPEANFP----SLET 345
+ LH FD +D L HL + + F
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502
Query: 346 LIAKI-HEDRKVAERA------LDLPLYSKY--RDDPYLK 376
L KI H+ L Y Y +DP +
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 4e-05
Identities = 44/348 (12%), Positives = 98/348 (28%), Gaps = 115/348 (33%)
Query: 27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86
+ ++L F + +D ++ V+D K E DH
Sbjct: 18 YKDILSVFEDAFVDNFDCKD----------------VQDM----PKSILSKEEI----DH 53
Query: 87 LCKVK-ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145
+ K A+ G RL L + +E + + + ++ +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQ------EEMVQKFVEEVLRINYKF------LMSPIKTE 101
Query: 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
+PS + +R + + + + +V R
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNV-----------------------SRLQPYL 138
Query: 206 EVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG-LGRGSKVLGIPTANLSTE 264
++ +LL+LRP K + ++ G LG G + +
Sbjct: 139 KLRQALLELRPAK-------------------NV---LIDGVLGSGKTWVALDVCL---- 172
Query: 265 GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 324
V + ++ W L + V+ + LL++ D ++
Sbjct: 173 -SYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQK-------------LLYQIDPNWTSR 216
Query: 325 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 372
H + S++ + ++ + + E L L L +
Sbjct: 217 SDHS-----SNIKLRIHSIQAELRRLLKSKPY-ENCL-LVL-----LN 252
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKP FLEA + + P +++I D V + GM + V +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232
Query: 206 E---------VINSLLDL 214
E S
Sbjct: 233 EEKINPPPYLTCESFPHA 250
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKPSP+ F A + + +E +++I D ++G V + GM + V +T ++ +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243
Query: 206 E---------VINSLLDL 214
E +++L +
Sbjct: 244 EHHPEVKADGYVDNLAEA 261
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 202
KP+P + +EA KRL ++ SL++ D + + AGK AG+ + P R
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196
Query: 203 AADEVINSLLD 213
+ LL
Sbjct: 197 RDSSELGDLLA 207
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 1e-04
Identities = 8/67 (11%), Positives = 19/67 (28%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
K + + + + S L + D+ + + A G+ +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246
Query: 208 INSLLDL 214
+ L
Sbjct: 247 YKNFETL 253
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 8e-04
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKP I A L +E +++ D+ I +G G++ + V S +P
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239
Query: 197 QTHRYTAADEVINSLLDLRPE 217
V++SL + E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| 3bnw_A | 181 | Riboflavin kinase, putative; APO structure, struct | 100.0 | |
| 1n08_A | 163 | Putative riboflavin kinase; phophoryl transferases | 100.0 | |
| 1nb0_A | 147 | Hypothetical protein FLJ11149; beta barrel, transf | 100.0 | |
| 2x0k_A | 338 | Riboflavin biosynthesis protein RIBF; riboflavin k | 100.0 | |
| 3op1_A | 308 | Macrolide-efflux protein; structural genomics, PSI | 100.0 | |
| 1mrz_A | 293 | Riboflavin kinase/FMN adenylyltransferase; rossman | 100.0 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.98 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.95 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.95 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.95 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.94 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.93 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.93 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.93 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.93 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.93 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.93 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.93 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.93 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.93 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.93 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.92 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.92 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.92 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.92 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.91 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.91 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.9 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.9 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.9 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.89 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.88 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.88 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.87 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.86 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.86 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.85 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.85 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.84 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.84 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.83 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.83 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.82 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.82 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.8 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.8 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.8 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.78 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.78 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.77 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.77 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.77 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.77 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.74 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.74 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.74 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.74 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.72 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.72 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.72 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.72 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.71 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.71 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.7 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.69 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.68 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.68 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.68 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.68 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.66 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.66 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.66 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.65 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.64 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.64 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.63 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.44 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.61 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.61 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.59 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.59 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.53 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.51 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.5 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.49 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.49 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.47 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.46 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.46 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.45 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.4 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.38 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.36 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.33 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.29 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.26 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.25 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.23 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.22 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.12 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.1 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.08 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.07 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 99.05 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.0 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.94 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.93 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.9 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.81 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.79 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.68 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.57 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.47 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.36 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.29 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.11 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.01 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.75 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.68 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.52 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.4 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.3 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.29 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.23 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.14 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.13 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.07 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.99 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.8 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.65 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.64 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.28 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.81 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.54 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.43 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.68 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 94.14 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 92.43 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 92.07 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 91.39 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 91.07 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 90.83 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.82 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 85.66 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 80.21 |
| >3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=344.96 Aligned_cols=151 Identities=33% Similarity=0.584 Sum_probs=124.8
Q ss_pred cCCCCCCceeeeeeeeecccCCCcccCCcccccCCC---CCccccCCCCCeEEEEEEEEec--------CceEEEEEEeC
Q 016755 229 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE---GYSDVLSEHPSGVYFGWAGLST--------RGVYKMVMSIG 297 (383)
Q Consensus 229 a~~llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~---~~~~~~p~~~~Gvy~~~~~~~~--------~~~~~~~~~iG 297 (383)
...+||+||+++|+|+||+++||++||||||||.++ ....++| +.|||++|+.+++ +.+|+||+|||
T Consensus 10 ~~~lLGrpy~i~G~Vv~G~~rGrr~LGfPTANl~l~~~~~~~~~~p--~~GVYa~~v~~~~~~~~~~~~~~~~~gv~nIG 87 (181)
T 3bnw_A 10 RQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPY--KNLVVYGWGTVSQVPGKERESFGPYPFAASIG 87 (181)
T ss_dssp CCCTTSCCEEEEEEEEC------CCSCCCCCEECCCHHHHHHHGGG--TTEEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred HHHhCCCCeEEEEEEEeCCccCccccCCccccccccccccccccCC--CCEEEEEEEEECCcccccccCCceeEEEEEec
Confidence 567899999999999999999955699999999842 2212335 4899999999854 37899999999
Q ss_pred CCCcccCCcceEEEEeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCccc
Q 016755 298 WNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKI 377 (383)
Q Consensus 298 ~~pt~~~~~~~~e~~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~ 377 (383)
+||||++..++||||||+||++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.|.|+.|++++||.+
T Consensus 88 ~nPTf~~~~~~vEvhilhDF~~DlYG~~i~V~fl~~LR~E~kF~sle~L~~QI~~Di~~Ar~~l~~~~~~~~~~~~~f~~ 167 (181)
T 3bnw_A 88 FNMQFDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQALVDTIKSDVQFTRDMLQKPQLQEFSRHSLFES 167 (181)
T ss_dssp CC------CCEEEEEESSCCSSCCTTCEEEEEEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCTTTSC
T ss_pred CCCeECCCeeEEEEEEcCCCCCccCCCEEEEEEehhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCccccccccCccccC
Confidence 99999776788999999339999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 016755 378 TSSK 381 (383)
Q Consensus 378 ~~~~ 381 (383)
||||
T Consensus 168 ~~~~ 171 (181)
T 3bnw_A 168 PSST 171 (181)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9987
|
| >1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=330.43 Aligned_cols=143 Identities=46% Similarity=0.849 Sum_probs=129.6
Q ss_pred CCCCCceeeeeeeeecccCCCcccCCcccccCCCC--CccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcce
Q 016755 231 TLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEG--YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT 308 (383)
Q Consensus 231 ~llg~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~--~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~ 308 (383)
.++|+||+++|+|+||+++||++||||||||.++. ...++| +.|||++|+.++ +.+|+||+|||+||||++..++
T Consensus 18 ~~~Grpy~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~~~~p--~~GVYa~~v~~~-~~~~~gv~nIG~~PTf~~~~~~ 94 (163)
T 1n08_A 18 VQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYR--DSGVYFGYAMVQ-KRVFPMVMSVGWNPYYKNKLRS 94 (163)
T ss_dssp CCTTCCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTS--CSEEEEEEEEET-TEEEEEEEEEEECTTCSSCCEE
T ss_pred CCCCCCEEEEEEEEeCCccCCCccCcCCCcccCcccccccCCC--CCEEEEEEEEEC-CEEEEEEEEeCCCCeECCCceE
Confidence 57899999999999999999656999999998752 212445 589999999984 4899999999999999876778
Q ss_pred EEEEeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCcc
Q 016755 309 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 376 (383)
Q Consensus 309 ~e~~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 376 (383)
||||||+||++|+||++++|+|++|||+|+||+|+|+|++||++|++.||++|+.|.|+.|++|+||.
T Consensus 95 vEvhil~df~~dlYG~~i~V~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~ 162 (163)
T 1n08_A 95 AEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 162 (163)
T ss_dssp EEEEETTCCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred EEEEEecCCCCccCCCEEEEEEHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhccchhhcccchhhc
Confidence 99999933999999999999999999999999999999999999999999999999999999999994
|
| >1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=329.44 Aligned_cols=142 Identities=49% Similarity=0.936 Sum_probs=128.7
Q ss_pred CCceeeeeeeeecccCCCcccCCcccccCCCCCccccCC-CCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEE
Q 016755 234 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPW 312 (383)
Q Consensus 234 g~p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~-~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~ 312 (383)
.+||+++|+|+||+++||++||||||||.++.. +++|. ++.|||++|+.+.++.+|+||+|||+||||++...+||||
T Consensus 2 ~~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~-~~~P~~~~~GVYa~~v~~~~~~~~~gv~nIG~~PT~~~~~~~vEvh 80 (147)
T 1nb0_A 2 HLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH 80 (147)
T ss_dssp CCSEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSSSCEEEEEE
T ss_pred CccEEEEEEEEeCCccCccccCCccEEEEcccc-ccCCCCCCCEEEEEEEEECCCCEEEEEEEecCCCeECCCceEEEEE
Confidence 479999999999999995569999999977543 55662 2489999999986567899999999999997767789999
Q ss_pred eccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCcc
Q 016755 313 LLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 376 (383)
Q Consensus 313 ~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 376 (383)
||+||++|+||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+.|.|+.|++|+||.
T Consensus 81 il~df~~dlYG~~i~v~f~~~lR~E~kF~sle~L~~qI~~D~~~ar~~l~~~~~~~~~~~~~~~ 144 (147)
T 1nb0_A 81 IMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQ 144 (147)
T ss_dssp ESSCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHH
T ss_pred EecCCCCccCCCEEEEEEehhccCCcCCCCHHHHHHHHHHHHHHHHHHHhCcchhhcccchhhc
Confidence 9933999999999999999999999999999999999999999999999999999999999996
|
| >2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=373.29 Aligned_cols=240 Identities=23% Similarity=0.351 Sum_probs=193.6
Q ss_pred hHHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCC---ChHHHHHHHHHcCC
Q 016755 95 GANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP---SPDIFLEAAKRLNM 163 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp---~p~~~~~~~~~lg~ 163 (383)
...+-++.|++.|+...++ +.++++|++.++.+.++. +.+++|+|+.+|+. +.+.++..
T Consensus 73 ~~~eR~~ll~~~gVD~v~v~~F~~~~a~ls~e~Fi~~il~~~l~~----~~ivvG~Df~FG~~r~g~~~~L~~~------ 142 (338)
T 2x0k_A 73 TLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHA----SHVVVGANFTFGENAAGTADSLRQI------ 142 (338)
T ss_dssp CHHHHHHHHHHTTCSEEEEECTTTSSSSCCHHHHHHHCCCCCTCE----EEEEEETTCEESGGGCEEHHHHHHH------
T ss_pred CHHHHHHHHHhcCCCEEEEccccHHHHhCCHHHHHHHHHHhhcCC----CEEEEeecCCCCCCCCCCHHHHHHH------
Confidence 4556667777788887665 456677777655344555 78999999998864 33333332
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeee
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV 243 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v 243 (383)
+++ |+.++.++....+.... |++.+++.|.+++... |+.+||+||+++|+|
T Consensus 143 -----------------~~~-g~~V~~v~~~~~~~~~I-SST~IR~~L~~G~i~~----------a~~lLGrpy~i~G~V 193 (338)
T 2x0k_A 143 -----------------CQS-RLTVDVIDLLDDEGVRI-SSTTVREFLSEGDVAR----------ANWALGRHFYVTGPV 193 (338)
T ss_dssp -----------------TTT-TSEEEEECCCEETTEEC-SHHHHHHHHHTTCHHH----------HHHHHTSCCEEEEEC
T ss_pred -----------------hcC-CeEEEEECcEecCCccc-ccchHHHHHhcCcHHH----------HHHhcceeeEEEEEE
Confidence 455 89999998854444444 4467777777777665 999999999999999
Q ss_pred eecccCC-CcccCCcccccCCCCCccccCCCCCeEEEEEEEEec-----------CceEEEEEEeCCCCcccCCcceEEE
Q 016755 244 VKGLGRG-SKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST-----------RGVYKMVMSIGWNPYFDNAEKTIEP 311 (383)
Q Consensus 244 ~~G~~~g-~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~-----------~~~~~~~~~iG~~pt~~~~~~~~e~ 311 (383)
+||+++| |+ ||||||||.+++. +++| +.|||++|+.++. +.+|+||+|||+||||++..++||+
T Consensus 194 v~G~~~Gsr~-lGfPTANl~~~~~-~~~P--~~GVYa~~v~~~~~~~~~~~~~~~~~~~~gv~niG~~PT~~~~~~~vE~ 269 (338)
T 2x0k_A 194 VRGAGRGGKE-LGFPTANQYFHDT-VALP--ADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVES 269 (338)
T ss_dssp BCCSSCSSSC-TTSCSEEEEECTT-BCCC--CSEEEEEEEEECSCCSCCEESCCTTCEEEEEEEEEEETTTCTTEEEEEE
T ss_pred ecCcccccce-ecccccccCCccc-ccCC--CCeEEEEEEEECccccccccccCCCCEEEEEEEEcCCCccCCCcceEEE
Confidence 9999999 85 9999999987665 6777 4899999999851 6899999999999999766778999
Q ss_pred EeccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCC--cccccccCCCCcccc
Q 016755 312 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDL--PLYSKYRDDPYLKIT 378 (383)
Q Consensus 312 ~~~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~--~~~~~~~~~~~~~~~ 378 (383)
|||| |++|+||++++|+|++|||+|+||+|+|+|++||++|++.||++|+. +.|...+|+.|+.+.
T Consensus 270 hild-f~~dlYg~~i~v~f~~~lR~e~kF~s~e~L~~qi~~D~~~ar~~l~~~~~~~~~~~~~~~~~~~ 337 (338)
T 2x0k_A 270 FVLD-RDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQAHKMAPETYFLQAE 337 (338)
T ss_dssp EETT-CCEECTTCEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHSTTTSCSSEECCSC
T ss_pred Eeec-CCcccCCCEEEEEEehhhCCccCCCCHHHHHHHHHHHHHHHHHHHhhcccccccChHHhhhhcc
Confidence 9999 99999999999999999999999999999999999999999999965 456777777777543
|
| >3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-49 Score=362.56 Aligned_cols=218 Identities=24% Similarity=0.336 Sum_probs=169.4
Q ss_pred HHHHHHHHHHCCCCEEEE--------eCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~--------s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
..+-++.|.+.|+...++ ..++++|++..+ ..++. +.+++|+|+.+|+ ...-.
T Consensus 81 ~~eK~~ll~~lGVD~v~~~~F~~~~a~ls~e~Fv~~ll-~~l~~----~~ivvG~DfrFG~-r~G~~------------- 141 (308)
T 3op1_A 81 PAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI-KAMNA----KIIVAGFDYTFGS-DKKTA------------- 141 (308)
T ss_dssp HHHHHHHHHHHTCCEEEEECCCHHHHTCCHHHHHHHHH-HHHTE----EEEEEETTCCBTT-TTBCS-------------
T ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHcCCHHHHHHHHH-HHcCC----CEEEECcCCCCCC-cCCCH-------------
Confidence 344556666667877665 466788888777 56665 8999999999987 43211
Q ss_pred EEEEecChhhhHHHHhcCC-EEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeeec
Q 016755 168 SLVIEDSVIGVVAGKAAGM-EVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG 246 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~-~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~G 246 (383)
...++.|- .++.++....+.... |++.+++.|.+++... |+++|||||+++|+|+||
T Consensus 142 -----------~~L~~~~~~~V~~v~~~~~~~~~I-SST~IR~~L~~G~v~~----------A~~lLGrpy~i~G~Vv~G 199 (308)
T 3op1_A 142 -----------EDLKNYFDGEVIIVPPVEDEKGKI-SSTRIRQAILDGNVKE----------AGKLLGAPLPSRGMVVHG 199 (308)
T ss_dssp -----------TTHHHHCSSEEEEECCCBCSSCBC-CHHHHHHHHHHTCHHH----------HHHHHSSCCEEEEEEEBC
T ss_pred -----------HHHHHhCCCCEEEeCCEecCCceE-eHHHHHHHHHcCCHHH----------HHhhcCcceeEEEEEEEC
Confidence 11112221 566666644344444 4477777777788775 999999999999999999
Q ss_pred ccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEeccCCCccccCCeE
Q 016755 247 LGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEEL 326 (383)
Q Consensus 247 ~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~~~~f~~~~yg~~~ 326 (383)
+++||+ ||||||||.+++. +++| +.||||+|+.++ +++|+||+|||+||||++.++++|+|||| |++|+||+++
T Consensus 200 ~~~Gr~-lGfPTANl~~~~~-~~~P--~~GVYa~~v~~~-~~~~~gv~niG~~PT~~~~~~~vE~hild-f~~dlYG~~i 273 (308)
T 3op1_A 200 NARGRT-IGYPTANLVLLDR-TYMP--ADGVYVVDVEIQ-RQKYRAMASVGKNVTFDGEEARFEVNIFD-FNQDIYGETV 273 (308)
T ss_dssp C-------CCCCEEEEECSS-BCCC--CSEEEEEEEEET-TEEEEEEEEECBTTTBC--CCEEEEEETT-CCCCCTTCEE
T ss_pred CccCcc-cCCCcEeecCccc-ccCC--CCceEEEEEEEC-CEEEEEEEEeccCCccCCCceEEEEEEec-CCCccCCCEE
Confidence 999996 9999999998765 6777 489999999984 58999999999999998767899999998 9999999999
Q ss_pred EEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 016755 327 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERA 360 (383)
Q Consensus 327 ~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~ 360 (383)
+|+|++|||+|+||+|+|+|++||++|++.||++
T Consensus 274 ~v~f~~~lR~e~kF~s~e~L~~Qi~~D~~~ar~~ 307 (308)
T 3op1_A 274 MVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW 307 (308)
T ss_dssp EEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHC
T ss_pred EEEEHHhcCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999974
|
| >1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=351.07 Aligned_cols=218 Identities=26% Similarity=0.332 Sum_probs=154.4
Q ss_pred HHHHHHHHHHCCCCEEEEe------CCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 96 ANRLIKHLSCHGVPMALAS------NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 96 ~~~lL~~L~~~G~~~~i~s------~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
..+-++.|++.| .+.++. .++++|++.++ ++. +.++.|+|+.+|+...
T Consensus 56 ~~eR~~ll~~lg-~~~v~~F~~~a~ls~~~Fi~~il---l~~----~~iVvG~Df~fG~~~~------------------ 109 (293)
T 1mrz_A 56 VESRVEMLSRYA-RTVVLDFFRIKDLTPEGFVERYL---SGV----SAVVVGRDFRFGKNAS------------------ 109 (293)
T ss_dssp HHHHHHHHTTTS-CEEEECHHHHTTCCHHHHHHHHC---TTC----CEEEEETTCCBSGGGC------------------
T ss_pred HHHHHHHHHhCC-CEEEEEhHHhhcCCHHHHHHHHh---cCC----CEEEECCCCCCCCCCC------------------
Confidence 344456666666 455543 46667776544 333 7899999999886421
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCCCCcccccCCCCCCceeeeeeeeecccC
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGR 249 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~p~~~~G~v~~G~~~ 249 (383)
.|+...++.|+.++.++....+.... |++.+++.+.+++... |+.+||+||+++|+|+||+++
T Consensus 110 ------g~~~~L~~~G~~V~~v~~~~~~~~~i-SST~IR~~L~~G~i~~----------a~~lLGr~y~i~G~Vv~G~~~ 172 (293)
T 1mrz_A 110 ------GNASFLRKKGVEVYEIEDVVVQGKRV-SSSLIRNLVQEGRVEE----------IPAYLGRYFEIEGIVHKDREF 172 (293)
T ss_dssp ------BCHHHHHHTTCEEEEECCCEETTEEC-CHHHHHHHHHTTCTTT----------THHHHSSCCEEEEEC------
T ss_pred ------CCHHHHHhCCCEEEEECCEEeCCccc-cHhHHHHHHhcCcHHH----------HhhhcCCCeEEEEEEccCccc
Confidence 12233334789999988754333444 4467777777777664 899999999999999999999
Q ss_pred CCcccCCcccccCCC-CCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCC-cceEEEEeccCCCccccCCeEE
Q 016755 250 GSKVLGIPTANLSTE-GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA-EKTIEPWLLHEFDEDFYDEELH 327 (383)
Q Consensus 250 g~~~lg~ptaN~~~~-~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~-~~~~e~~~~~~f~~~~yg~~~~ 327 (383)
||+ ||||||||.++ +. +++| +.|||++|+.+.++.+|+||+|||+||||++. .+++|||||| |++|+||++++
T Consensus 173 Gr~-lGfPTaNl~~~~~~-~~~P--~~GVYa~~v~~~~~~~~~gv~niG~~PT~~~~~~~~iE~hild-f~~dlYg~~i~ 247 (293)
T 1mrz_A 173 GRK-LGFPTANIDRGNEK-LVDL--KRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYILD-FEGDLYGQRLK 247 (293)
T ss_dssp ------CCCEECBCCSSC-BCCC--CSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEETT-CCSCCTTCEEE
T ss_pred cce-ecccceEeccCccC-cCCC--CCeEEEEEEEEecCcEEEEEEEeccCcccCCCccceEEEEecc-CCcccCCCEEE
Confidence 996 99999999876 44 6777 48999999987234889999999999999764 5789999999 99999999999
Q ss_pred EEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHc
Q 016755 328 LVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL 361 (383)
Q Consensus 328 v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~ 361 (383)
|+|++|||+|+||+|+|+|++||++|++.||++|
T Consensus 248 v~f~~~lR~e~kF~s~~~L~~qi~~D~~~a~~~l 281 (293)
T 1mrz_A 248 LEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMI 281 (293)
T ss_dssp EEEEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_pred EEEHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-30 Score=236.10 Aligned_cols=217 Identities=41% Similarity=0.615 Sum_probs=192.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
++++|+|+||+||||+|+...+..++.++++++|............+....+.+..++..++.+.+..++...+.+.+..
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 106 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999988888888889999998888998888887888887777777777
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC--CCCCCCCChHHHHHHHHHcCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~--~~~~~kp~p~~~~~~~~~lg~ 163 (383)
......++||+.++|+.|+++|++++++||+....+...+.+..++..+|+.+++++ ++..+||+|++|+.+++++|+
T Consensus 107 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 186 (250)
T 3l5k_A 107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186 (250)
T ss_dssp HGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred HhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence 777889999999999999999999999999998877776634467888999999999 899999999999999999999
Q ss_pred CC--CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCccccCCC
Q 016755 164 EP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLP 222 (383)
Q Consensus 164 ~p--~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~~~~l~ 222 (383)
+| ++|++|||+.+|+.+|+++|+.++++.++.........++.+++++.++...+..++
T Consensus 187 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~ 247 (250)
T 3l5k_A 187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLP 247 (250)
T ss_dssp CCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCC
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCC
Confidence 98 999999999999999999999999999987655555678999999999876654444
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-31 Score=237.51 Aligned_cols=206 Identities=22% Similarity=0.296 Sum_probs=165.0
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHH---HHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFV---NEV 79 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~---~~~ 79 (383)
|+|+||+||||+||||+|+.+.+..+++++++++|.+++.+......|.+..+.+..++...+... ...... ...
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRK 80 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHH
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 346799999999999999999999999999999999998888888889999998888888776542 222211 111
Q ss_pred HHHHHhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHH
Q 016755 80 YSMFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (383)
Q Consensus 80 ~~~~~~~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~ 156 (383)
...+.... ....++||+.++++.|+++|++++++|++.. ....+ +.+|+..+|+.++++++++.+||+|++|..
T Consensus 81 ~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~ 157 (243)
T 4g9b_A 81 NLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTIL-AALELREFFTFCADASQLKNSKPDPEIFLA 157 (243)
T ss_dssp HHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHH
T ss_pred HHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhh-hhhhhccccccccccccccCCCCcHHHHHH
Confidence 22222222 2346899999999999999999999998765 34456 789999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLD 213 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e 213 (383)
+++++|++|++|++|||+.+|+.+|+++|+.+|+|.++...... .+.++..++++.+
T Consensus 158 a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~ 216 (243)
T 4g9b_A 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSA 216 (243)
T ss_dssp HHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHH
T ss_pred HHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHH
Confidence 99999999999999999999999999999999999987554332 2233444444444
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=228.27 Aligned_cols=188 Identities=28% Similarity=0.453 Sum_probs=168.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL- 87 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 87 (383)
||+|+||+||||+|+.+.+..+++++++++|.+.+.+......+....+...............+.+...+.+.+....
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFS 80 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999998888899999888888888888777777777666665555443
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
....++||+.++++.|++.|++++++||++...+...+ +.+|+.++|+.++++++++.+||+|++|+.+++++|++|++
T Consensus 81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 45789999999999999999999999999999988888 88999999999999999999999999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEE-ecCCCCc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVA-VPSLPKQ 197 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~-v~~~~~~ 197 (383)
|++|||+.+|+.+|+++||.+|+ +.++...
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~ 190 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIERIYGVVHSLND 190 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCCEEEECCSSSC
T ss_pred eEEEecCHHHHHHHHHcCCcEEEEecCCCCC
Confidence 99999999999999999999885 6665443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-29 Score=226.52 Aligned_cols=203 Identities=24% Similarity=0.370 Sum_probs=166.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCC--HH---HHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KH---EFVNEVY 80 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~ 80 (383)
..|||+|+||+||||+|+.+.+..+++++++++|.+++.+......+....+.+..+......... .. .+.....
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKN 102 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999888877888888888888777766544322 21 2222333
Q ss_pred HHHHhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHH
Q 016755 81 SMFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (383)
Q Consensus 81 ~~~~~~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~ 157 (383)
..+.... ....++||+.++++.|++.|++++++|++.. ....+ +.+|+..+|+.++++++++.+||+|++|..+
T Consensus 103 ~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a 179 (250)
T 4gib_A 103 NYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMS 179 (250)
T ss_dssp HHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHH
T ss_pred HHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHh-hhcccccccceeecccccCCCCCcHHHHHHH
Confidence 3333333 3456899999999999999999998877654 44567 7889999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 158 ~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
++++|++|++|++|||+++|+++|+++|+.+|+|.... ....|+.+++++.++.
T Consensus 180 ~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 180 AKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQLK 233 (250)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGCC
T ss_pred HHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhCC
Confidence 99999999999999999999999999999999996532 2235789999998874
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=220.98 Aligned_cols=199 Identities=16% Similarity=0.250 Sum_probs=158.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (383)
|++|+|+|||||||+|+...+..++.++++++|.+.. ........|.+..+.+... .+. ...++...+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 76 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC-----LSKDQISEAVQIYRSYYK 76 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT-----SCGGGHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH-----cCHHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999998763 4455666666654433222 221 23444444545444
Q ss_pred hh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~-~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. .....++||+.++|+.|++ |++++++||++...+...+ +.+|+..+|+.+++++ ..+||+|++|+.+++++|+
T Consensus 77 ~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~ 152 (210)
T 2ah5_A 77 AKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQL 152 (210)
T ss_dssp HTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTC
T ss_pred HhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCC
Confidence 43 3346789999999999999 9999999999998888888 7889999999999887 7899999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|++|++|||+.+|+++|+++|+.++++.++...... ...++.+++++.++
T Consensus 153 ~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el 205 (210)
T 2ah5_A 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 9999999999999999999999999999986543222 23467888888775
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=217.11 Aligned_cols=207 Identities=26% Similarity=0.388 Sum_probs=178.4
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
+|+|+|+||+||||+|+...+..++.++++++|............+....+.+..+....+.......+...+.+.+...
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNN 82 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHS
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999998877777888888887777777777666666667766666665554
Q ss_pred hc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 87 ~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.. ...++||+.++|+.|++.|++++++|++....+...+ +.+|+..+|+.++++++...+||+|++++.+++++|++
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 161 (214)
T 3e58_A 83 PLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ 161 (214)
T ss_dssp CCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred hcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCC
Confidence 32 3468999999999999999999999999999999888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
|++|++|||+.+|+.+|+++|+.++++.++...... ..++.+++++.++.
T Consensus 162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el~ 211 (214)
T 3e58_A 162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDVL 211 (214)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGGG
T ss_pred hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHHH
Confidence 999999999999999999999999999885433322 56789999998853
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=219.88 Aligned_cols=209 Identities=27% Similarity=0.323 Sum_probs=174.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
..++|+|+|||||||+|+...+..++.++++++|.......+....+....+.+..++...........+...+.+.+..
T Consensus 16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGA 95 (237)
T ss_dssp -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999997777777888888888877766654332222234444455555554
Q ss_pred hh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 86 HL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 86 ~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.. ....++||+.++|+.|+++|++++++||+....++..+ +.+|+..+|+.+++++++..+||+|++++.+++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg 174 (237)
T 4ex6_A 96 HVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLG 174 (237)
T ss_dssp HHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHT
T ss_pred hcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcC
Confidence 44 56789999999999999999999999999999888888 788999999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
++|++|++|||+.+|+.+|+.+|+.+++|.++...... ...++.++.++.++.
T Consensus 175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~ 229 (237)
T 4ex6_A 175 IPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAV 229 (237)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHH
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHH
Confidence 99999999999999999999999999999987543222 236788999988864
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=222.27 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=164.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC--CChhhhhhhcCCCHHHHHHHHHHHh------------------C
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDY------------------G 67 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~------------------~ 67 (383)
++|+|+|||||||+|+...+..++.++++.+|.+ .+........+.+....+..++... +
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 5899999999999999999999999999999986 5666677788887776666554211 1
Q ss_pred CCCCHH---HHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC
Q 016755 68 LPCAKH---EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (383)
Q Consensus 68 ~~~~~~---~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~ 143 (383)
...+.. ++...+.+.+.... ....++||+.++|+.|+++|++++++||++...+...+ +.+|+. +|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~ 160 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKS 160 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCC
Confidence 111222 22233344443332 45678999999999999999999999999988888888 778888 9999999999
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+..+||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.+++++.++
T Consensus 161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el 233 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL 233 (240)
T ss_dssp TSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence 999999999999999999999999999999999999999999999999886543221 22467888888774
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-28 Score=215.44 Aligned_cols=210 Identities=22% Similarity=0.239 Sum_probs=175.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 83 (383)
+++|+|+||+||||+|+...+..++.++++++|............+......+..++...+...+...+. ..+.+.+
T Consensus 4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAY 83 (233)
T ss_dssp -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHHH
T ss_pred CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999988888888888888888888887777665554433 2333334
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
........++||+.++|+.|++.|++++++|++....+...+ +.+|+..+|+.++++++...+||+|.+++.+++++|+
T Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~ 162 (233)
T 3s6j_A 84 ERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGA 162 (233)
T ss_dssp HHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTC
T ss_pred HHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCC
Confidence 444456789999999999999999999999999999888888 8889999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccCcc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~~~ 217 (383)
+|++|++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++...
T Consensus 163 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~ 218 (233)
T 3s6j_A 163 PIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNH 218 (233)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHT
T ss_pred CHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999886433322 23478899999986443
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-28 Score=217.14 Aligned_cols=208 Identities=24% Similarity=0.371 Sum_probs=171.9
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (383)
+|+++|+|+|||||||+|+...+..++.++++++|............+......+..++.. ++...+...+...+.. +
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 98 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHE-K 98 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-H
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH-H
Confidence 4567899999999999999999999999999999999887777777777777777666554 6666565554433222 2
Q ss_pred Hhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC--cEEEeCCCCCCCCCChHHHHHHH
Q 016755 84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 84 ~~~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f--~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
...+ ....++||+.++|+.|++.|++++++||+....+...+ +. ++..+| +.+++++++..+||+|++++.++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~ 176 (243)
T 3qxg_A 99 SILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMAL 176 (243)
T ss_dssp HHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHH
T ss_pred HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHH
Confidence 2222 45789999999999999999999999999988888777 56 999999 89999999999999999999999
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
+++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++.
T Consensus 177 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~ 235 (243)
T 3qxg_A 177 KKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLC 235 (243)
T ss_dssp HHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHH
T ss_pred HHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 999999999999999999999999999999999986544332 235788999988864
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=215.84 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=167.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
++|+|+||+||||+|+...+..++.++++++|.+ .+.+.+....+.+..+.+..++. .....++...+.+.+...
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 77 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK----DKFREEYVEVFRKHYLEN 77 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG----GGCCTHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC----hHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999876 45555666777777776666543 112234445555555443
Q ss_pred -hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 87 -~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
.....++||+.++|+.|++.|++++++||++...+...+ +.+|+..+|+.+++++++..+||+|+.+..+++++|++|
T Consensus 78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP 156 (222)
T ss_dssp SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence 246789999999999999999999999999999888888 788999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
++|++|||+.+|+.+|+++|+.++++.++...... ..++.+++++.++.
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~ 205 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLV 205 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHH
T ss_pred hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHH
Confidence 99999999999999999999999999886543332 46688888888753
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=213.12 Aligned_cols=207 Identities=23% Similarity=0.391 Sum_probs=169.6
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 84 (383)
++++|+|+||+||||+|+...+..++.++++++|............+......+..++.. ++...+...+...+.. +.
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 98 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQA-KT 98 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-HH
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHH-HH
Confidence 356899999999999999999999999999999999887777777787777776666544 6666565554433322 22
Q ss_pred hhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC--cEEEeCCCCCCCCCChHHHHHHHH
Q 016755 85 DHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 85 ~~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f--~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
..+ ....++||+.++|+.|+++|++++++||+....+...+ +. ++..+| +.+++++++..+||+|++++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~ 176 (247)
T 3dv9_A 99 EEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALK 176 (247)
T ss_dssp HHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHH
T ss_pred HHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHH
Confidence 222 34688999999999999999999999999988888888 66 999999 999999999999999999999999
Q ss_pred HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccC
Q 016755 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR 215 (383)
Q Consensus 160 ~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~ 215 (383)
++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.+++++.++.
T Consensus 177 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~ 234 (247)
T 3dv9_A 177 KGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN 234 (247)
T ss_dssp HHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHH
T ss_pred HcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 99999999999999999999999999999999987544332 236788999988754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=212.21 Aligned_cols=207 Identities=19% Similarity=0.213 Sum_probs=167.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 84 (383)
+|+|+|+|||||||+|+...+..++.++++++|... ....+....|.+..+.+...+ +.+.. ...+...+.+.+.
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 78 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFDEETATVAIDYYRDYFK 78 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999989999999999999875 445667777877776655443 33311 1222222333332
Q ss_pred hh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~-~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. .....++||+.++|+.|++.|++++++|++....+...+ +.+|+..+|+.++++++...+||+|.+++.+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi 157 (226)
T 3mc1_A 79 AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNI 157 (226)
T ss_dssp TTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTC
T ss_pred HhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCc
Confidence 21 234689999999999999999999999999999888888 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccCcc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~~~ 217 (383)
+|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++...
T Consensus 158 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~ 213 (226)
T 3mc1_A 158 KSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKK 213 (226)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHH
T ss_pred CcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999987654333 25778999999886443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=212.27 Aligned_cols=202 Identities=28% Similarity=0.351 Sum_probs=158.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCC--CCCHHHH---HHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL--PCAKHEF---VNEVYSM 82 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~ 82 (383)
++|+|+|||||||+|+...+..++.++++++|............+....+....++...+. ..+.... ...+.+.
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRD 80 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999888888888899998888888888776 4444332 3333344
Q ss_pred HHhhhcc---CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 83 FSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 83 ~~~~~~~---~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
+...... ..++||+.++|+.|++.|++++++||++. +...+ +.+|+..+|+.+++++++..+||+|++++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 81 YQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA 157 (233)
T ss_dssp HHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred HHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence 4444322 33799999999999999999999999865 56667 788999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 160 ~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
++|++|++|++|||+.+|+.+|+++|+.+++++... . ...++.+++++.++..
T Consensus 158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~---~-~~~ad~v~~s~~el~~ 210 (233)
T 3nas_A 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQ---P-MLGADLVVRQTSDLTL 210 (233)
T ss_dssp HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCH
T ss_pred HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCcc---c-cccCCEEeCChHhCCH
Confidence 999999999999999999999999999999997632 1 2267899999988653
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=209.83 Aligned_cols=207 Identities=18% Similarity=0.206 Sum_probs=165.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC------------C-CH----HHHHHHHHHHhCC
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------K-TP----LEEAAIIVEDYGL 68 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g------------~-~~----~~~~~~~~~~~~~ 68 (383)
||++|+|+||+||||+|+...+..++.++++++|..........+.+ . .. ...+..++...+.
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY 83 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999998876544322211 1 11 1233445566666
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCC
Q 016755 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (383)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~k 148 (383)
+.....+...+.+.+. ....++||+.++|+.|++. ++++++||.....+...+ +.+|+..+|+.++++++.+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k 158 (238)
T 3ed5_A 84 EADGALLEQKYRRFLE---EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQK 158 (238)
T ss_dssp CCCHHHHHHHHHHHHT---TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSCT
T ss_pred CCcHHHHHHHHHHHHH---hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCCC
Confidence 6554444333332221 3578999999999999999 999999999998888888 7889999999999999999999
Q ss_pred CChHHHHHHHHHcC-CCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 149 PSPDIFLEAAKRLN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 149 p~p~~~~~~~~~lg-~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
|+|.+++.+++++| ++|++|++|||+. +|+.+|+.+|+.++++.++.........++++++++.++...
T Consensus 159 p~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~ 229 (238)
T 3ed5_A 159 PMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHI 229 (238)
T ss_dssp TCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHH
T ss_pred CChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHH
Confidence 99999999999999 9999999999998 999999999999999988754444455778999999986544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=216.81 Aligned_cols=209 Identities=28% Similarity=0.397 Sum_probs=176.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+++|+|+||+||||+|+...+..++.++++++|....... .....+......+..+...++....... ...+.+.+.+
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 104 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDF-LDVLETRFNA 104 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTH-HHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHH
Confidence 4689999999999999999999999999999998876554 4566788888888888878876655332 3334444444
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE-EEeCCCCC-CCCCChHHHHHHHHHcCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~-i~~~~~~~-~~kp~p~~~~~~~~~lg~ 163 (383)
.+....++||+.++|+.|++.|++++++||.....+...+ +.+|+..+|+. ++++++.. .+||+|++++.+++++|+
T Consensus 105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi 183 (259)
T 4eek_A 105 AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGI 183 (259)
T ss_dssp HHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTC
T ss_pred HhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCC
Confidence 4467889999999999999999999999999998888888 78899999999 99999999 999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc----c-c-cccccchhhccccccCcc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----T-H-RYTAADEVINSLLDLRPE 217 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~----~-~-~~~~a~~vi~~l~e~~~~ 217 (383)
+|++|++|||+.+|+.+|+++|+.++++.++... . . ....++.+++++.++...
T Consensus 184 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~ 243 (259)
T 4eek_A 184 LPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAA 243 (259)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHH
Confidence 9999999999999999999999999999886432 1 1 124578999999986544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=207.69 Aligned_cols=203 Identities=20% Similarity=0.340 Sum_probs=163.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (383)
|++|+|+||+||||+|+...+..++.++++++|...+........|....+.+.. ++.+. ........+.+.+..
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 77 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTE----LGIAASEFDHFQAQYEDVMAS 77 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHH----TTCCGGGHHHHHHHHHHHHTT
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHH----cCCCHHHHHHHHHHHHHHHhh
Confidence 3589999999999999999999999999999998888777777888776655443 34432 111222222222222
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
......++||+.++|+.|+++ ++++++||++...+...+ +.+|+..+|+.++++++.+..||+|+++..+++++|++|
T Consensus 78 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 155 (209)
T 2hdo_A 78 HYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 155 (209)
T ss_dssp CGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred hcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCc
Confidence 224577899999999999999 999999999998888888 788999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
++|++|||+.+|+.+|+.+|+.+++++++.........++.++.++.++.
T Consensus 156 ~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~ 205 (209)
T 2hdo_A 156 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDIL 205 (209)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred ccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHH
Confidence 99999999999999999999999999876542222222788888888753
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=210.86 Aligned_cols=203 Identities=15% Similarity=0.210 Sum_probs=167.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDH 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (383)
|+|+|+||+||||+|+...+..++..+++++|............+....+.+... ++.+. ....+...+.+.+...
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 104 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADK 104 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHT
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999988777777778887776654433 23331 1222333333333332
Q ss_pred -hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC-
Q 016755 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME- 164 (383)
Q Consensus 87 -~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~- 164 (383)
.....++||+.++|+.|++.|++++++|++....+...+ +.+|+..+|+.++++++...+||+|.++..+++++|++
T Consensus 105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 105 GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKD 183 (240)
T ss_dssp GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence 245789999999999999999999999999999888888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
|++|++|||+.+|+.+|+++|+.++++.++...... ...++.++.++.++
T Consensus 184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 235 (240)
T 3sd7_A 184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI 235 (240)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence 999999999999999999999999999987554333 25678899988875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=207.45 Aligned_cols=206 Identities=20% Similarity=0.203 Sum_probs=164.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC---Chhhhhhhc-------------C-CCHH----HHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---DGREKHKIV-------------G-KTPL----EEAAIIVED 65 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~---~~~~~~~~~-------------g-~~~~----~~~~~~~~~ 65 (383)
|++|+|+||+||||+|+...+..++.++++++|... +........ + .... ..+..++..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 468999999999999999989999999999998775 433321111 1 1111 124455566
Q ss_pred hCCCCCHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC
Q 016755 66 YGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (383)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~ 144 (383)
.+.+ .......+...+.... ....++|++.++|+.|+ .|++++++||++...+...+ +.+|+..+|+.++++++.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~ 158 (240)
T 3qnm_A 83 VGVE--DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDL 158 (240)
T ss_dssp TTCC--CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGT
T ss_pred cCCC--cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEeccC
Confidence 6665 3344444545454443 56789999999999999 99999999999999888888 788999999999999999
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCcc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~~ 217 (383)
+.+||+|.+++.+++++|++|++|++|||++ +|+.+|+++|+.+++++++.. ......|+++++++.++...
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHH
Confidence 9999999999999999999999999999996 999999999999999998654 23345779999999986443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-26 Score=201.74 Aligned_cols=207 Identities=23% Similarity=0.365 Sum_probs=169.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
++|+|+||+||||+|+...+..++..+++++|.... ........|....+....++...+.. ....++...+...+.+
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 589999999999999998888899999999987765 34445566777777667676665553 2344554544444444
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.+ ....++|++.++++.+++.|++++++|+.....+...+ +.+++..+|+.++++++.+.+||++..++.+++++|++
T Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~ 166 (226)
T 1te2_A 88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD 166 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC
Confidence 33 45788999999999999999999999999988888888 78899999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCc-cccccccchhhccccccC
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLR 215 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~a~~vi~~l~e~~ 215 (383)
+++|++|||+.||+++++.+|+.++++.++... ......+++++.++.++.
T Consensus 167 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~ 218 (226)
T 1te2_A 167 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 218 (226)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHh
Confidence 999999999999999999999999999886432 223456788999988854
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=212.85 Aligned_cols=210 Identities=18% Similarity=0.247 Sum_probs=165.9
Q ss_pred cCCccEEEEecCCcccccHHHH-HHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHH----------HHHHhCCCCCHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMF-SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKHE 74 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~-~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~ 74 (383)
++++|+|+||+||||+|+...+ ..++..+++++|............+......+.. +...++...+...
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEED 90 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHH
Confidence 4568999999999999986544 6788889999999888777777777665444332 2334455544433
Q ss_pred HH---HHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc-CcEEEeCCCCCCCCC
Q 016755 75 FV---NEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRTGKP 149 (383)
Q Consensus 75 ~~---~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~-f~~i~~~~~~~~~kp 149 (383)
+. ..+...+.+.. ....++||+.++|+.|++.|++++++||.+...+...+ +.+++..+ |+.++++++...+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp 169 (277)
T 3iru_A 91 IKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVRGRP 169 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSSCTT
T ss_pred HHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCCCCC
Confidence 32 23333333322 45789999999999999999999999999998888888 77788877 899999999999999
Q ss_pred ChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCEEEEecCCCCc------------------------ccc-ccc
Q 016755 150 SPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTA 203 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~ 203 (383)
+|.++..+++++|++| ++|++|||+.+|+.+|+++|+.+++|.++... ... ...
T Consensus 170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 249 (277)
T 3iru_A 170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG 249 (277)
T ss_dssp SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC
Confidence 9999999999999999 99999999999999999999999999997431 111 235
Q ss_pred cchhhccccccCc
Q 016755 204 ADEVINSLLDLRP 216 (383)
Q Consensus 204 a~~vi~~l~e~~~ 216 (383)
++++++++.++..
T Consensus 250 ad~v~~~~~el~~ 262 (277)
T 3iru_A 250 AHYVIDSVADLET 262 (277)
T ss_dssp CSEEESSGGGTHH
T ss_pred CCEEecCHHHHHH
Confidence 7889999988643
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-25 Score=203.44 Aligned_cols=209 Identities=18% Similarity=0.228 Sum_probs=167.0
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHh----CCCCCHHHH---HH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDY----GLPCAKHEF---VN 77 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~---~~ 77 (383)
..++|+|+||+||||+|+...+..++.++++++|... ....+..+.+.+....+...+... +.......+ ..
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 99 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHH
Confidence 4578999999999999999999999999999999864 455566677777666655554431 233333322 23
Q ss_pred HHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHH
Q 016755 78 EVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (383)
Q Consensus 78 ~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~ 156 (383)
.+.+.+.... ....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.+++++++...||+|+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~ 178 (243)
T 2hsz_A 100 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 178 (243)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHH
Confidence 3333343332 45678999999999999999999999999999888888 788999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc--cccccccchhhccccccC
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDLR 215 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~--~~~~~~a~~vi~~l~e~~ 215 (383)
+++++|++|++|++|||+.+|+.+|+.+|+.++++.++... ......++.++.++.++.
T Consensus 179 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~ 239 (243)
T 2hsz_A 179 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADIL 239 (243)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGG
T ss_pred HHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHH
Confidence 99999999999999999999999999999999999886432 122346688888888753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=204.99 Aligned_cols=204 Identities=16% Similarity=0.147 Sum_probs=157.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh---hhhh----------cCCCHH---HHHHHHHHHhCCCCC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---KHKI----------VGKTPL---EEAAIIVEDYGLPCA 71 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~---~~~~----------~g~~~~---~~~~~~~~~~~~~~~ 71 (383)
|+|+|+|||||||+|+...+..++.++++++|....... +... .|.+.. +.+..+....+.+.
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 81 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDV- 81 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCH-
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCH-
Confidence 479999999999999998888899999998887654322 1111 144433 44555555555542
Q ss_pred HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCcccCcEEEeCCCCCCCC
Q 016755 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (383)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~---~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~k 148 (383)
... ......+...+....++|++.++|+.|++.|++++++||+. ...+...+ +.+++..+|+.+++++++...|
T Consensus 82 -~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k 158 (235)
T 2om6_A 82 -ELV-KRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYK 158 (235)
T ss_dssp -HHH-HHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCT
T ss_pred -HHH-HHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCC
Confidence 222 22222333333333469999999999999999999999999 88888777 7889999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
|+|+.+..+++++|++|++|++|||+. ||+++|+.+|+.+++++++.........++.+++++.++.
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 226 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLK 226 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHH
Confidence 999999999999999999999999999 9999999999999999987433333334678888888753
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=207.17 Aligned_cols=206 Identities=19% Similarity=0.260 Sum_probs=162.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH-cCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCC-----HHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFVNEVYS 81 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 81 (383)
++|+|+|||||||+|+...+..++.+++++ +|.... .......|....+.+..++..++.+.+ ...+...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA 81 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHH
Confidence 589999999999999988888889988888 687765 445566777777767777777766533 1223333333
Q ss_pred HHHhhh--ccCCCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC-CCCCChHHHHHH
Q 016755 82 MFSDHL--CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEA 157 (383)
Q Consensus 82 ~~~~~~--~~~~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~-~~kp~p~~~~~~ 157 (383)
.+.... ....++||+.++|+.|+++ |++++++|++....+...+ +.+|+..+|+.++++++.. .+||.+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~ 160 (234)
T 2hcf_A 82 LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERA 160 (234)
T ss_dssp HHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence 333332 3467899999999999999 9999999999998888888 7889999999888887764 456889999999
Q ss_pred HHHcC--CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccc--cccchhhccccccC
Q 016755 158 AKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDLR 215 (383)
Q Consensus 158 ~~~lg--~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~--~~a~~vi~~l~e~~ 215 (383)
++++| ++|++|++|||+.+|+.+|+++|+.++++.++....... ..++.++.++.++.
T Consensus 161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~ 222 (234)
T 2hcf_A 161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETD 222 (234)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHH
T ss_pred HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHH
Confidence 99999 999999999999999999999999999998865433321 23678888888754
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=198.30 Aligned_cols=200 Identities=23% Similarity=0.306 Sum_probs=162.8
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMFS 84 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 84 (383)
+|+|+|||||||+|+...+..++.++++++|.. ..........|.+....+..++...+...+.... ...+...+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYV 81 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 789999999999999988889999999999887 6666667777888777777777777655444332 233333343
Q ss_pred hhhc---cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 85 DHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 85 ~~~~---~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
.... ...++|++.++|+.|++.|++++++|++ ..+...+ +.+++..+|+.++++++.+.+||+|+.++.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 82 KMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred HHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 3332 3578899999999999999999999998 4456666 67899999999999999999999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
|++|++|++|||+.||++||+.+|+.+++++.. .... .+++++.++.++.
T Consensus 159 gi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~---~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP---EDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH---HHHC-SSSEEESSGGGCC
T ss_pred CCChhHeEEEeCCHHHHHHHHHCCCEEEEECCH---HHhc-cccchhcCHHhCC
Confidence 999999999999999999999999999999541 2222 5688888888754
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=195.94 Aligned_cols=196 Identities=18% Similarity=0.264 Sum_probs=162.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
++|+|+||+||||+|+...+..++.++++++|............+ .+..+.+..+......+ ......+...+.+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD---VEVLNQVRAQSLAE 79 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC---HHHHHHHHHHHHTT
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc---HHHHHHHHHHHHHh
Confidence 589999999999999998888899999999998777777777777 66766666554333321 33344444444443
Q ss_pred h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 87 ~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
. ....+.|++.++++.+++.|++++++|++....+. .+ +.+++..+|+.++++++...+||+++.+..+++++|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 80 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS 157 (207)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCc
Confidence 3 45678999999999999999999999999988888 77 778999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++|++|||+.+|+.+++.+|+.++++.++. . .++.+++++.++
T Consensus 158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el 200 (207)
T 2go7_A 158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADI 200 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence 999999999999999999999999998865 3 467888888875
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-26 Score=203.56 Aligned_cols=205 Identities=19% Similarity=0.231 Sum_probs=154.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcC---CCCChhhhhhhc--C-----CCHHHHHHHHHHHh-CCCCCHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKHKIV--G-----KTPLEEAAIIVEDY-GLPCAKHEFV 76 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g---~~~~~~~~~~~~--g-----~~~~~~~~~~~~~~-~~~~~~~~~~ 76 (383)
|+|+|+|||||||+|+...+..++.+++++++ ............ + ......+..++..+ +.... ...
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 78 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNP--KWI 78 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCH--HHH
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccc--hHH
Confidence 37899999999999999888888888887763 343332221111 0 00112234444444 44321 112
Q ss_pred HHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHH
Q 016755 77 NEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 155 (383)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~ 155 (383)
..+.+.+.... ....++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++++.+||+|++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (241)
T 2hoq_A 79 SAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFK 157 (241)
T ss_dssp HHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHH
Confidence 23333343332 34678999999999999999999999999998888888 78899999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc---cccchhhccccccC
Q 016755 156 EAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY---TAADEVINSLLDLR 215 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~---~~a~~vi~~l~e~~ 215 (383)
.+++++|++|++|++|||+. +|+.+|+++|+.++++.++....... ..++.+++++.++.
T Consensus 158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~ 221 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLL 221 (241)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHH
T ss_pred HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHH
Confidence 99999999999999999998 99999999999999997765432222 25678888888753
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=203.44 Aligned_cols=197 Identities=23% Similarity=0.239 Sum_probs=155.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHH-HHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVL-KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
++++|+|+||+||||+|+...+..++ .++++++|... .......+......+..+... ........+.+.+.
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 94 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK-----RWKEATILYENSLE 94 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHh
Confidence 35689999999999999987777777 88898888765 334445555655555444321 23344444444444
Q ss_pred --hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 85 --DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 85 --~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.......++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.++++++...+||+|+.+..+++++|
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 95 KSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHT
T ss_pred hhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcC
Confidence 22246789999999999999999999999999999888888 889999999999999999999999999999999999
Q ss_pred CCCC-cEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 163 MEPS-SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~-e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
++|+ +|++|||+.+|+.+|+++|+.++++..... ..++.++.++.++.
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~ 222 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIR 222 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHH
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHH
Confidence 9999 999999999999999999999999966432 23456777777653
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-25 Score=196.55 Aligned_cols=208 Identities=23% Similarity=0.269 Sum_probs=161.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
|++|+|+||+||||+|+...+..++.++++++|.. .....+....|.........+.... .......+...+...+..
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADI 82 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHH
Confidence 35899999999999999988889999999999876 4455566667777666555443211 000112222333333433
Q ss_pred hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.+ ....+.|++.++++.+++.|++++++|+.....+...+ +.+++..+|+.++++++...+||++..+..+++++|++
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 161 (225)
T 3d6j_A 83 YMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC 161 (225)
T ss_dssp HTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC
T ss_pred hccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC
Confidence 33 45678899999999999999999999999988888888 78899999999999999999999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-c-cccchhhccccccCc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-Y-TAADEVINSLLDLRP 216 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~-~~a~~vi~~l~e~~~ 216 (383)
|++|++|||+.+|+.|++.+|+.++++.++...... . ..++.++.++.++..
T Consensus 162 ~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~ 215 (225)
T 3d6j_A 162 PEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLIS 215 (225)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-
T ss_pred hHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHH
Confidence 999999999999999999999999999886443322 2 236888999888643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=203.60 Aligned_cols=205 Identities=22% Similarity=0.250 Sum_probs=162.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh------------------cCCCHHHH----HHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDY 66 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~------------------~g~~~~~~----~~~~~~~~ 66 (383)
+|+|+|||||||+|+...+..++.++++++|..+........ .|....+. +...+...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 589999999999998777778888999999998776544221 34444433 33444445
Q ss_pred CCCCCHHHHHHHHHHHHHhhhc--cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC
Q 016755 67 GLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (383)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~ 144 (383)
+. .+...+.......+..... ...++||+.++|+.|++.|++++++||+... +...+ +.+|+..+|+.+++++++
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~ 157 (263)
T 3k1z_A 81 GV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAA 157 (263)
T ss_dssp TC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeeccc
Confidence 54 3445554445555555442 3579999999999999999999999998774 56677 789999999999999999
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccc---cccccchhhccccccCc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDLRP 216 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~---~~~~a~~vi~~l~e~~~ 216 (383)
+.+||+|+++..+++++|++|++|++|||++ +|+.+|+++|+.++++.++..... ....++.++.++.++..
T Consensus 158 ~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~ 233 (263)
T 3k1z_A 158 GWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233 (263)
T ss_dssp SSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHH
Confidence 9999999999999999999999999999998 999999999999999998653322 12367899999988643
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=200.43 Aligned_cols=200 Identities=18% Similarity=0.232 Sum_probs=158.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC------------CC----HHHHHHHHHHHhCCCC
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------KT----PLEEAAIIVEDYGLPC 70 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g------------~~----~~~~~~~~~~~~~~~~ 70 (383)
+++|+|+||+||||+|+...+..++.++++++|............+ .. ..+.+..++...+.+.
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP 83 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999899999999999998887665433221 11 2234455566666664
Q ss_pred CHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCC
Q 016755 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (383)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~ 150 (383)
.... ...+........++|++.++|+.|++ |++++++||++...+...+ +. +..+|+.+++++++..+||+
T Consensus 84 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~KP~ 154 (240)
T 3smv_A 84 DAAE-----REEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYKPN 154 (240)
T ss_dssp CHHH-----HHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCTTS
T ss_pred CHHH-----HHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCCCC
Confidence 4322 23344555677899999999999999 8999999999998888777 44 66789999999999999999
Q ss_pred hHHHHHH---HHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCC-------Cc-cccccccchhhccccccC
Q 016755 151 PDIFLEA---AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP-------KQ-THRYTAADEVINSLLDLR 215 (383)
Q Consensus 151 p~~~~~~---~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~-------~~-~~~~~~a~~vi~~l~e~~ 215 (383)
|+.|..+ ++++|++|++|++|||+. +|+.+|+++|+.++++++.. .. ......++.+++++.++.
T Consensus 155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~ 231 (240)
T 3smv_A 155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMA 231 (240)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHH
Confidence 9999999 899999999999999997 99999999999999998641 11 222357789999988853
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=196.75 Aligned_cols=203 Identities=24% Similarity=0.395 Sum_probs=164.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
++|+|+||+||||+|+...+..++.++++++|.... ........+....+.+..++...+...... ....+.+.+...
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMR 81 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHH
Confidence 589999999999999998888899999999998877 455667778888888888887777654432 223333444333
Q ss_pred h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCC--CCChHHHHHHHHHcC
Q 016755 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~--kp~p~~~~~~~~~lg 162 (383)
. ....++|++.++++.++. +++++|++....+...+ +.+++..+| +.++++++...+ ||+|.+++.+++++|
T Consensus 82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~ 157 (229)
T 2fdr_A 82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 157 (229)
T ss_dssp HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcC
Confidence 2 457889999999998864 89999999998888888 778999999 999999988889 999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc-----ccccc-ccchhhccccccC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-----THRYT-AADEVINSLLDLR 215 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~-----~~~~~-~a~~vi~~l~e~~ 215 (383)
++|++|++|||+.+|+.+++.+|+.++++.++... ..... .++.++.++.++.
T Consensus 158 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~ 216 (229)
T 2fdr_A 158 VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLP 216 (229)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHH
T ss_pred CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHH
Confidence 99999999999999999999999999999886542 11111 2688888888854
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-25 Score=200.35 Aligned_cols=207 Identities=20% Similarity=0.290 Sum_probs=149.6
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHH----cCCCCChhh-----hhhhcC-------CCHHHH----HHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVK----YGKEWDGRE-----KHKIVG-------KTPLEE----AAIIVED 65 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~----~g~~~~~~~-----~~~~~g-------~~~~~~----~~~~~~~ 65 (383)
.+++|+|+|||||||+|+...+..++.++++. +|....... .....+ ....+. +...+..
T Consensus 15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (260)
T 2gfh_A 15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 94 (260)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence 35799999999999999999888888888764 444431111 111111 122211 1112222
Q ss_pred -hCCCCCHHHHHHHHHHHHHh-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC
Q 016755 66 -YGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (383)
Q Consensus 66 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~ 143 (383)
.+.... ......+...+.. ......++||+.++|+.|++ +++++++||++...+...+ +.+|+..+|+.++++++
T Consensus 95 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~~ 171 (260)
T 2gfh_A 95 TKGGADN-RKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGE 171 (260)
T ss_dssp HHCSSCC-HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGG
T ss_pred hcCccch-HHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEecCC
Confidence 121112 2222223223322 23467899999999999997 5999999999999888888 78899999999999999
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCC-EEEEecCCCCccc-cccccchhhccccccC
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGM-EVVAVPSLPKQTH-RYTAADEVINSLLDLR 215 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~-~~i~v~~~~~~~~-~~~~a~~vi~~l~e~~ 215 (383)
...+||+|++|..+++++|++|++|++|||+ .+|+.+|+++|+ .++++.+...... ....++.+++++.++.
T Consensus 172 ~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~ 246 (260)
T 2gfh_A 172 QKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP 246 (260)
T ss_dssp SSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHH
Confidence 9999999999999999999999999999996 899999999999 8999976533211 2345688888888853
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=204.32 Aligned_cols=126 Identities=12% Similarity=0.076 Sum_probs=109.0
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHh---hcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~---~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
....++||+.++|+.|+++|++++++||++...+...+ + ..|+..+|+.++++ +++ +||+|++|..+++++|++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~ 203 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCS 203 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence 45789999999999999999999999999998888777 5 34699999999999 888 999999999999999999
Q ss_pred CCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc--cccccchhhccccccCc
Q 016755 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLRP 216 (383)
Q Consensus 165 p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~--~~~~a~~vi~~l~e~~~ 216 (383)
|++|++|||+.+|+.+|+++|+.++++.+...... ....++.+++++.++..
T Consensus 204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~ 257 (261)
T 1yns_A 204 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYL 257 (261)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC
T ss_pred cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCc
Confidence 99999999999999999999999999977433221 12356788999988643
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=198.92 Aligned_cols=204 Identities=19% Similarity=0.244 Sum_probs=151.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh---------hhhhhhcCC------CHHHHHHHHHHHhCCCCC
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGK------TPLEEAAIIVEDYGLPCA 71 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~~~~~~g~------~~~~~~~~~~~~~~~~~~ 71 (383)
+++|+|+||+||||+|+...+..++..+ ...+..... .......+. ...+.+..++...+.+.+
T Consensus 3 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (230)
T 3um9_A 3 HAIKAVVFDLYGTLYDVYSVRTSCERIF-PGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD 81 (230)
T ss_dssp SSCCEEEECSBTTTBCGGGGHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCceEEEEcCCCCcCcchHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCC
Confidence 5689999999999999976555443321 111100000 000011111 113444556666676644
Q ss_pred HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
.... +.+...+....++|++.++|+.|++.|++++++||++...+...+ +.+|+..+|+.++++++...+||+|
T Consensus 82 ~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~ 155 (230)
T 3um9_A 82 ADGE-----AHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSFDHLISVDEVRLFKPHQ 155 (230)
T ss_dssp HHHH-----HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTCH
T ss_pred HHHH-----HHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhcceeEehhhcccCCCCh
Confidence 4322 222233456789999999999999999999999999999888888 7889999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc-cccccchhhccccccCcc
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLRPE 217 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~a~~vi~~l~e~~~~ 217 (383)
.++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..... ....++.+++++.++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 999999999999999999999999999999999999999998643322 234678999999886544
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=203.87 Aligned_cols=204 Identities=21% Similarity=0.328 Sum_probs=159.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
|++|+|+|||||||+|+...+..++.++++++|. .... ......|....+....+.... ........+...+..
T Consensus 33 m~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 107 (275)
T 2qlt_A 33 LKINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDF----ADEEYVNKLEGEIPE 107 (275)
T ss_dssp EEESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGG----CCHHHHHHHHHTHHH
T ss_pred ccCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccC----CcHHHHHHHHHHHHH
Confidence 3479999999999999998888899998888874 3332 334455766666555443321 122333334343433
Q ss_pred hh-ccCCCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HL-CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~-~~~~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.. ....++||+.++|+.|++. |++++++|++....+...+ +.+++. .|+.++++++...+||+|++++.+++++|+
T Consensus 108 ~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi 185 (275)
T 2qlt_A 108 KYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGF 185 (275)
T ss_dssp HHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTC
T ss_pred HHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCC
Confidence 33 4567899999999999999 9999999999998888888 677776 478999999999999999999999999999
Q ss_pred -------CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-ccccchhhccccccCcc
Q 016755 164 -------EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPE 217 (383)
Q Consensus 164 -------~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-~~~a~~vi~~l~e~~~~ 217 (383)
+|++|++|||+.+|+++|+++|+.+++|.++...... ...++.++.++.++...
T Consensus 186 ~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~ 247 (275)
T 2qlt_A 186 PINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG 247 (275)
T ss_dssp CCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred CccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence 9999999999999999999999999999986543332 23578999999987544
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=196.42 Aligned_cols=203 Identities=15% Similarity=0.235 Sum_probs=150.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChh---------hhhhhc----CC--C----HHHHHHHHHHHhC
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---------EKHKIV----GK--T----PLEEAAIIVEDYG 67 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~---------~~~~~~----g~--~----~~~~~~~~~~~~~ 67 (383)
+++|+|+||+||||+|+...+..+. +.+...+..+... ...... +. . ..+.+..++...+
T Consensus 2 ~~~k~i~FDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (233)
T 3umb_A 2 TSIRAVVFDAYGTLFDVYSVAARAE-QLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLN 80 (233)
T ss_dssp CCCCEEEECSBTTTEETHHHHHHHH-HHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCcccccHHHHHHHH-HHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHcC
Confidence 4689999999999999976654433 2221111111000 000111 11 1 2234455566666
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC
Q 016755 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~ 147 (383)
.+.+.... ..+.. .+....++||+.++|+.|++.|++++++||++...+...+ +.+|+..+|+.++++++...+
T Consensus 81 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~ 154 (233)
T 3umb_A 81 LPLGNHAE-ATLMR----EYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVDAVRLY 154 (233)
T ss_dssp CCCCHHHH-HHHHH----HHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGGGTTCC
T ss_pred CCCCHHHH-HHHHH----HHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEecccCCC
Confidence 66554332 22222 2346789999999999999999999999999999888888 889999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc-cccccchhhccccccCc
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLRP 216 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~a~~vi~~l~e~~~ 216 (383)
||+|+++..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++..... ....++.+++++.++..
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~ 224 (233)
T 3umb_A 155 KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQ 224 (233)
T ss_dssp TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHH
Confidence 9999999999999999999999999999999999999999999988644332 23467899999988643
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-25 Score=197.15 Aligned_cols=201 Identities=17% Similarity=0.233 Sum_probs=155.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCCC--------------------HHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKT--------------------PLEEAAIIVED 65 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~~--------------------~~~~~~~~~~~ 65 (383)
+++|+|+||+||||+|+...+..++.++++++|.+....... .+.+.. ..+.+..++..
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRE 92 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 468999999999999999888999999999999887654432 222210 12233344444
Q ss_pred hCC---CCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC
Q 016755 66 YGL---PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (383)
Q Consensus 66 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~ 142 (383)
.+. ...... .+.+...+....++|++.++|+.|++. ++++++||.+...+...+ +.+|+. |+.+++++
T Consensus 93 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~ 163 (254)
T 3umg_A 93 SGIDPTNHDSGE-----LDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSD 163 (254)
T ss_dssp TTCCGGGSCHHH-----HHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCCHH
T ss_pred hCCCcCcCCHHH-----HHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcC
Confidence 444 222211 122334445678899999999999997 999999999999888888 777875 89999999
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC----CCCccc---cccccchhhccccccC
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTH---RYTAADEVINSLLDLR 215 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~----~~~~~~---~~~~a~~vi~~l~e~~ 215 (383)
++..+||+|.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++++ +..... ....++.+++++.++.
T Consensus 164 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~ 243 (254)
T 3umg_A 164 INRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLA 243 (254)
T ss_dssp HHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999984 322211 1356789999998864
Q ss_pred c
Q 016755 216 P 216 (383)
Q Consensus 216 ~ 216 (383)
.
T Consensus 244 ~ 244 (254)
T 3umg_A 244 A 244 (254)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-24 Score=190.04 Aligned_cols=200 Identities=19% Similarity=0.207 Sum_probs=146.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-----------hhhcCCCHHH----HHHHHHHHhCCCCCHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-----------HKIVGKTPLE----EAAIIVEDYGLPCAKH 73 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-----------~~~~g~~~~~----~~~~~~~~~~~~~~~~ 73 (383)
+|+|+|||||||+|+...+..++..+++.+...-..... ....+.+... .........+...+.+
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAAD 87 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHH
Confidence 899999999999999888877777665544322122221 1334444433 2233333344444444
Q ss_pred HHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
.. ..+.+.+.+.. ....++||+.++++.|++.| ++++++||+....+...+ +.+++..+|+.++++ +||+|
T Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~ 160 (234)
T 3ddh_A 88 II-RQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTE 160 (234)
T ss_dssp HH-HHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSH
T ss_pred HH-HHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCH
Confidence 33 33344444433 46789999999999999999 999999999988888888 788999999998864 58999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCC----Ccccc-ccccchhhccccccC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP----KQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~----~~~~~-~~~a~~vi~~l~e~~ 215 (383)
.+++.+++++|++|++|++|||++ +|+.+|+.+|+.++++..+. ..... ...++++++++.++.
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~ 230 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLL 230 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHH
T ss_pred HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHH
Confidence 999999999999999999999997 99999999999999995542 22222 223488899998853
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=198.91 Aligned_cols=208 Identities=18% Similarity=0.234 Sum_probs=160.2
Q ss_pred CCccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHH----------HHhCCCCCHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKHEF 75 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~ 75 (383)
|++|+|+|||||||+|+.. .+..++.++++++|............|.........+. ..++...+...+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 83 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHH
Confidence 4589999999999999877 56788889999999887766666666766554443322 233443333322
Q ss_pred ---HHHHHHHHHhh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCCC
Q 016755 76 ---VNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS 150 (383)
Q Consensus 76 ---~~~~~~~~~~~-~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp~ 150 (383)
...+...+... .....++||+.++++.|++.|++++++|+.+...+...+ +.+++..+| +.+++++++..+||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~ 162 (267)
T 1swv_A 84 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPY 162 (267)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTS
T ss_pred HHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCC
Confidence 22233323322 245778999999999999999999999999988888777 667777775 888999999999999
Q ss_pred hHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCEEEEecCCCCc------------------------ccc-cccc
Q 016755 151 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAA 204 (383)
Q Consensus 151 p~~~~~~~~~lg~~p-~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~a 204 (383)
|+.+..+++++|++| ++|++|||+.||+.+++.+|+.++++.+++.. ... ...+
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 242 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence 999999999999999 99999999999999999999999999987542 111 2347
Q ss_pred chhhccccccC
Q 016755 205 DEVINSLLDLR 215 (383)
Q Consensus 205 ~~vi~~l~e~~ 215 (383)
+++++++.++.
T Consensus 243 d~v~~~~~el~ 253 (267)
T 1swv_A 243 HFTIETMQELE 253 (267)
T ss_dssp SEEESSGGGHH
T ss_pred ceeccCHHHHH
Confidence 88888888864
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=190.50 Aligned_cols=201 Identities=16% Similarity=0.260 Sum_probs=145.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh---------hhhhhhcCC------CHHHHHHHHHHHhCCCCCH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGK------TPLEEAAIIVEDYGLPCAK 72 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~~~~~~g~------~~~~~~~~~~~~~~~~~~~ 72 (383)
++|+|+|||||||+|+...+..++..+ ...+..... .......+. .....+..++..++.+...
T Consensus 3 m~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
T 1zrn_A 3 YIKGIAFDLYGTLFDVHSVVGRCDEAF-PGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDA 81 (232)
T ss_dssp CCCEEEECSBTTTEETHHHHHHHHHHS-TTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred CceEEEEecCCcccCchhhHHHHHHHc-cccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCCCH
Confidence 579999999999999987665544421 000000000 000001110 1122233344455554332
Q ss_pred HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChH
Q 016755 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~ 152 (383)
.. . ..+...+....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++...+||+|+
T Consensus 82 ~~-~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~ 155 (232)
T 1zrn_A 82 RT-R----STLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNR 155 (232)
T ss_dssp HH-H----HHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHH
T ss_pred HH-H----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheEEEecccCCCCCCHH
Confidence 22 1 122333446788999999999999999999999999999888888 78899999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc-cccccchhhccccccC
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLR 215 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~a~~vi~~l~e~~ 215 (383)
.++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++..... ....++.+++++.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 219 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVV 219 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHH
Confidence 99999999999999999999999999999999999999988643222 2345688889888853
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-25 Score=197.37 Aligned_cols=201 Identities=17% Similarity=0.261 Sum_probs=154.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hhcCC----------------C----HHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGK----------------T----PLEEAAIIVE 64 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~g~----------------~----~~~~~~~~~~ 64 (383)
.|++|+|+|||||||+|+...+..++.++++++|.+....... .+.+. . ..+.+..++.
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG 98 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence 4679999999999999999889999999999999887654331 11111 0 1122333444
Q ss_pred HhCCCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC
Q 016755 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (383)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~ 144 (383)
.++........ ..+...+....++|++.++|+.|++. ++++++||.+...+...+ +.+|+. |+.+++++++
T Consensus 99 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~~ 169 (254)
T 3umc_A 99 EFGLALDEALL-----QRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCADLF 169 (254)
T ss_dssp HTTCCCCHHHH-----HHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHHHH
T ss_pred HhCCCCCHHHH-----HHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeeccc
Confidence 44444332221 22333445678899999999999986 999999999998888888 777875 8999999999
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC----CCCcc-cc--ccccchhhccccccC
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQT-HR--YTAADEVINSLLDLR 215 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~----~~~~~-~~--~~~a~~vi~~l~e~~ 215 (383)
..+||+|.+|+.+++++|++|++|++|||+.+|+.+|+.+|+.++++++ +.... .. ...|+++++++.++.
T Consensus 170 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~ 247 (254)
T 3umc_A 170 GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLH 247 (254)
T ss_dssp TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHH
T ss_pred ccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHH
Confidence 9999999999999999999999999999999999999999999999984 32221 11 346789999998864
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=191.32 Aligned_cols=202 Identities=16% Similarity=0.242 Sum_probs=144.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC---------hhhhhhhcCC--C----HHHHHHHHHHHhCCCCC
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD---------GREKHKIVGK--T----PLEEAAIIVEDYGLPCA 71 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~---------~~~~~~~~g~--~----~~~~~~~~~~~~~~~~~ 71 (383)
|++|+|+|||||||+|+...+..++..+ ...+.... ........+. . ....+..++..++....
T Consensus 12 M~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (240)
T 2no4_A 12 DSLRACVFDAYGTLLDVHSAVMRNADEV-GASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDR 90 (240)
T ss_dssp SCCCEEEECCBTTTBCTTHHHHTTHHHH-CTTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCTTH
T ss_pred ccccEEEEeCCCcccccHhHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 4589999999999999977665443321 00000000 0000011111 0 11222333444444322
Q ss_pred HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
. ..... +...+....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++.+.+||+|
T Consensus 91 ~-~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~ 164 (240)
T 2no4_A 91 K-GLKDR----LMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDP 164 (240)
T ss_dssp H-HHHHH----HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSH
T ss_pred H-HHHHH----HHHHHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCH
Confidence 1 12222 2223345789999999999999999999999999999888888 7889999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccccccc-chhhccccccC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA-DEVINSLLDLR 215 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a-~~vi~~l~e~~ 215 (383)
++++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++.........+ +.+++++.++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~ 229 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELW 229 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHH
Confidence 99999999999999999999999999999999999999998865422223456 78888888854
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=194.60 Aligned_cols=201 Identities=11% Similarity=0.043 Sum_probs=137.2
Q ss_pred CCccEEEEecCCcccccHHH-------HHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCCCCHH---HH
Q 016755 7 KLMSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKH---EF 75 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~-------~~~a~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~ 75 (383)
+++|+|+|||||||+|+... +...+...+...+...... ......+.+..+....+...++...... .+
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 108 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL 108 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHH
Confidence 35899999999999999643 3344455555555443212 2233444455555555544443322211 11
Q ss_pred -HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc-----------CCcccCcEEEeCCC
Q 016755 76 -VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-----------GWNESFSVIVGSDE 143 (383)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~-----------gl~~~f~~i~~~~~ 143 (383)
...+.+.+........++||+.++|+. |++++++||++...+...+ +.. ++..+|+.++.. .
T Consensus 109 ~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~ 182 (253)
T 2g80_A 109 QGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-N 182 (253)
T ss_dssp HHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-H
T ss_pred HHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-e
Confidence 112333343333456789999999998 8999999999999888877 544 477777777655 3
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
+..+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+..........++.+++++.+
T Consensus 183 ~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 252 (253)
T 2g80_A 183 TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFET 252 (253)
T ss_dssp HHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred ccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhh
Confidence 3136999999999999999999999999999999999999999999998732222111125667777765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.6e-25 Score=191.53 Aligned_cols=187 Identities=19% Similarity=0.236 Sum_probs=143.4
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-Hh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF-SD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 85 (383)
+++|+|+||+||||+|+...+ .+++++.|............+.... .......+...+ ..
T Consensus 4 ~~~k~iifDlDGTL~d~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 64 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHDF----AAIREALSIPAEDDILTHLAALPAD---------------ESAAKHAWLLEHERD 64 (205)
T ss_dssp GGCCEEEECTBTTTEEEEECH----HHHHHHTTCCTTSCHHHHHHHSCHH---------------HHHHHHHHHHHTHHH
T ss_pred ccCCEEEEeCCCcCcccHHHH----HHHHHHhCCCchHHHHHHHhcCChH---------------HHHHHHHHHHHHHHH
Confidence 468999999999999985543 3566677876653332222111111 111112222222 22
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC--cEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f--~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
......++||+.++|+.|+++|++++++|++....+...+ +.+|+..+| +.+++++. ..+||+|+++..+++++|+
T Consensus 65 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~ 142 (205)
T 3m9l_A 65 LAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDV 142 (205)
T ss_dssp HEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTC
T ss_pred HhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCC
Confidence 2356789999999999999999999999999999988888 889999999 78887766 8899999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
+|++|++|||+.+|+.+|+.+|+.++++.++... ....++++++++.++..
T Consensus 143 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~ 193 (205)
T 3m9l_A 143 SPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRD 193 (205)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHH
Confidence 9999999999999999999999999999886532 22357899999988643
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=197.68 Aligned_cols=203 Identities=18% Similarity=0.229 Sum_probs=147.9
Q ss_pred CccEEEEecCCcccccHHHHHHH---HHHHHHHcCCCCCh----------hhhhhhcCCCH-------HHHHHHHHHHhC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEV---LKTFLVKYGKEWDG----------REKHKIVGKTP-------LEEAAIIVEDYG 67 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a---~~~~~~~~g~~~~~----------~~~~~~~g~~~-------~~~~~~~~~~~~ 67 (383)
|+|+|+|||||||+|+...+... +.+.++..|.+... .......+... .+.+..+...++
T Consensus 1 Mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 3u26_A 1 MIRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYG 80 (234)
T ss_dssp CCCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcC
Confidence 48999999999999997544333 33333344443211 01111222211 123334444444
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC
Q 016755 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~ 147 (383)
..... .+... ..........++|++.++|+.|++. ++++++||++...+...+ +.+|+..+|+.++++++.+.+
T Consensus 81 ~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~ 154 (234)
T 3u26_A 81 FKYPE-NFWEI---SLRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFF 154 (234)
T ss_dssp CCCCT-THHHH---HHHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBC
T ss_pred chHHH-HHHHH---HHHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCC
Confidence 32111 11111 1112223578999999999999999 999999999999888888 788999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhccccccCc
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~~ 216 (383)
||+|++++.+++++|++|++|++|||+. ||+.+|+.+|+.++++.++.........++.+++++.++..
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~ 224 (234)
T 3u26_A 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIK 224 (234)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHH
T ss_pred CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHH
Confidence 9999999999999999999999999998 99999999999999999976555444577899999988643
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-24 Score=191.08 Aligned_cols=201 Identities=15% Similarity=0.142 Sum_probs=148.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHH---HcCCCC---Chhh-----hh--hhcCCCHHHHHHHHH----HHhCCC
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLV---KYGKEW---DGRE-----KH--KIVGKTPLEEAAIIV----EDYGLP 69 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~---~~g~~~---~~~~-----~~--~~~g~~~~~~~~~~~----~~~~~~ 69 (383)
|++|+|+|||||||+|+...+..++.++++ +.|... .... .. ...|.+.......+. ...+..
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 90 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR 90 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence 358999999999999999988888888774 556554 1111 11 245776665554433 233333
Q ss_pred CCHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCC
Q 016755 70 CAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (383)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~k 148 (383)
.. ......+.+.+.+.. ....++||+.++|+.|+ .|++++++||+....+...+ +.+++..+|+.+++. +|
T Consensus 91 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~k 162 (251)
T 2pke_A 91 IE-ARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SE 162 (251)
T ss_dssp CC-HHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SC
T ss_pred CC-hHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CC
Confidence 33 233334444444433 45788999999999999 89999999999988888888 788999999988773 68
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcc----c--cccccch-hhccccccC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----H--RYTAADE-VINSLLDLR 215 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~----~--~~~~a~~-vi~~l~e~~ 215 (383)
|+|+.+..+++++|++|++|++|||+. +|+.+|+++|+.++++.++.... . ....++. +++++.++.
T Consensus 163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 237 (251)
T 2pke_A 163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWP 237 (251)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHH
T ss_pred CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHH
Confidence 999999999999999999999999999 99999999999999998764311 1 1235676 788888753
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=184.04 Aligned_cols=178 Identities=22% Similarity=0.230 Sum_probs=140.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
|++|+|+||+||||+|+...+..++.++++++|...+........+..... .+....+.. ..+...+.+.+...
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~ 77 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF---AIETFAPNL---ENFLEKYKENEARE 77 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHH---HHHHHCTTC---TTHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHH---HHHHHhhhH---HHHHHHHHHHHHHh
Confidence 358999999999999999888899999999999887765544433222211 122222211 12233334444444
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
.....++|++.++++.|+++|++++++|+.+. .+...+ +.+++..+|+.+++++++..+||+|+.++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-- 153 (190)
T 2fi1_A 78 LEHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS-- 153 (190)
T ss_dssp TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--
T ss_pred cCcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--
Confidence 44445899999999999999999999999874 566677 78899999999999999999999999999999999998
Q ss_pred cEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 167 e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|++|||+.+|+++++.+|+.+++++++
T Consensus 154 ~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 154 SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 9999999999999999999999999774
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=190.28 Aligned_cols=201 Identities=19% Similarity=0.279 Sum_probs=148.2
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH---cCCCCCh---hhhhhh----------cCCC----HHHHHHHHHHHhC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK---YGKEWDG---REKHKI----------VGKT----PLEEAAIIVEDYG 67 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~---~g~~~~~---~~~~~~----------~g~~----~~~~~~~~~~~~~ 67 (383)
|+|+|+||+||||+|+...+..+...+++. .+..... ...... .... .......++...+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 489999999999999987777665555443 3322211 111000 0001 1123344445555
Q ss_pred CCCC-HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC
Q 016755 68 LPCA-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 146 (383)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~ 146 (383)
++.. ...+...+.+.+........++||+.++|+.|++. ++++++||++.. + +.+|+..+|+.++++++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l-~~~~l~~~f~~~~~~~~~~~ 153 (230)
T 3vay_A 81 YDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V-RRLGLADYFAFALCAEDLGI 153 (230)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G-GGSTTGGGCSEEEEHHHHTC
T ss_pred CChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h-hhcCcHHHeeeeEEccccCC
Confidence 5421 12233444445555556788999999999999998 999999998865 5 67899999999999999999
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+||+|++++.+++++|++|++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++.
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~ 223 (230)
T 3vay_A 154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLP 223 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHH
T ss_pred CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHH
Confidence 99999999999999999999999999998 9999999999999999986543332456789999998864
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-24 Score=186.46 Aligned_cols=177 Identities=17% Similarity=0.174 Sum_probs=132.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCC-----------CHHHHHHHHHHHhCCCCCHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-----------TPLEEAAIIVEDYGLPCAKHEF 75 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~ 75 (383)
+|+|+|+|||||||+|+...+. ..++.++|..........+.+. ...+....+...++...+...+
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQV 79 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHH
T ss_pred ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4589999999999999876543 4556667765433332222222 2333333344444333332222
Q ss_pred HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh------cCCcccCcEEEeCCCCCCCCC
Q 016755 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKP 149 (383)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~------~gl~~~f~~i~~~~~~~~~kp 149 (383)
.. .+.. ....++||+.++|+.|++ |++++++||++...+...+ +. +|+..+|+.++++++++.+||
T Consensus 80 ~~----~~~~--~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp 151 (211)
T 2i6x_A 80 YD----ALLG--FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKP 151 (211)
T ss_dssp HH----HHGG--GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTT
T ss_pred HH----HHHH--hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCC
Confidence 11 1111 134678999999999999 9999999999998888777 66 799999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.+++++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999999999999999999874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=191.17 Aligned_cols=208 Identities=14% Similarity=0.130 Sum_probs=145.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHc---CCCCChhhhhhhcCC---CHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGK---TPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
..++|+|+||+||||+|+...+..++..++.++ +..+........... ........++...+. +...+...+
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~ 131 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKV--NALEYNRLV 131 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSS--CHHHHHHHH
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCC--CHHHHHHHH
Confidence 346899999999999999766666666655543 233333222111100 000112233333433 333332221
Q ss_pred HHHHHhhhccCCCCchHHHHHHHHHHCCC--CEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC----CCCCCChHH
Q 016755 80 YSMFSDHLCKVKALPGANRLIKHLSCHGV--PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDI 153 (383)
Q Consensus 80 ~~~~~~~~~~~~~~pg~~~lL~~L~~~G~--~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~----~~~kp~p~~ 153 (383)
.. +........++||+.++|+.|++.|+ +++++||+....+...+ +.+|+..+|+.++++++. ..+||+|++
T Consensus 132 ~~-~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~ 209 (282)
T 3nuq_A 132 DD-SLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKA 209 (282)
T ss_dssp TT-TSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHH
T ss_pred hh-hhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHH
Confidence 11 11112357889999999999999999 99999999999988888 788999999999987665 467999999
Q ss_pred HHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCC-EEEEecCCCCcc--ccccccchhhccccccCcc
Q 016755 154 FLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGM-EVVAVPSLPKQT--HRYTAADEVINSLLDLRPE 217 (383)
Q Consensus 154 ~~~~~~~lg~~p-~e~l~VGDs~~Di~~a~~aG~-~~i~v~~~~~~~--~~~~~a~~vi~~l~e~~~~ 217 (383)
+..+++++|++| ++|++|||+.+|+.+|+++|+ .++++....... .....++.+++++.++...
T Consensus 210 ~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 210 FEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp HHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred HHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999 999999999999999999999 666676654332 1134668999999986543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=183.70 Aligned_cols=177 Identities=19% Similarity=0.240 Sum_probs=132.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhh------cC-CCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI------VG-KTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (383)
++|+|+|||||||+|+.. ...++..+++++|........ ... .+ ....+.+.......+....... +
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 77 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED----F 77 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH----H
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH----H
Confidence 589999999999999763 245677778888765432211 110 11 1222222222222211112221 1
Q ss_pred HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 80 ~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
.+.+ .....++||+.++|+.|+++| +++++||++...+...+ +.+|+..+|+.++++++...+||+|+.+..+++
T Consensus 78 ~~~~---~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 78 RAVM---EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLT 152 (200)
T ss_dssp HHHH---HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHH
T ss_pred HHHH---HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHH
Confidence 1211 234569999999999999999 99999999999888888 778999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 160 ~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus 153 ~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 153 LAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 99999999999999999999999999999999874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-24 Score=192.10 Aligned_cols=196 Identities=17% Similarity=0.213 Sum_probs=136.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-h---cCCCH--HH------HHHHHHHHhCCCCCHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I---VGKTP--LE------EAAIIVEDYGLPCAKHEF 75 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~---~g~~~--~~------~~~~~~~~~~~~~~~~~~ 75 (383)
++|+|+||+||||+|+...+..++.++++++|.+.+...... + .|... .. .+..++..++.+.. .+.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 80 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYPS-ERL 80 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCCC-HHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCCc-HHH
Confidence 588999999999999987777888999999998876543321 1 22111 00 03445556665443 233
Q ss_pred HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHH
Q 016755 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 155 (383)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~ 155 (383)
...+.+.+. ......++||+.++|+.|+++|++++++||++. .+...+ +.+|+..+|+.++++++.+.+||+|+++.
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (220)
T 2zg6_A 81 VKELKEADI-RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFG 157 (220)
T ss_dssp HHHHHHTTT-TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHH-HHHTCGGGCSEEC-----------CCHHH
T ss_pred HHHHHHHhh-cccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence 333322111 113467899999999999999999999999976 467677 78899999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEecChh-hhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 156 EAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 156 ~~~~~lg~~p~e~l~VGDs~~-Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
.+++++|++| ++|||+.+ |+.+|+++|+.++++.++..... . +.+++++.++
T Consensus 158 ~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~-~---~~~i~~l~el 210 (220)
T 2zg6_A 158 FALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPD-V---RDRVKNLREA 210 (220)
T ss_dssp HHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTT-C---CSCBSSHHHH
T ss_pred HHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCC-c---ceEECCHHHH
Confidence 9999999998 99999998 99999999999999987432211 1 4567777664
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=186.52 Aligned_cols=178 Identities=20% Similarity=0.187 Sum_probs=138.2
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhc----------C-CCHHHHHHHHHHHhCCCCCHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------G-KTPLEEAAIIVEDYGLPCAKHEFV 76 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~----------g-~~~~~~~~~~~~~~~~~~~~~~~~ 76 (383)
++|+|+||+||||+|+.. ..+.+.++++|.+........+. + ....+....+...++.+.+...+.
T Consensus 27 ~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQID 103 (229)
T ss_dssp CCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 589999999999999863 34456666778764443332221 2 255556666666666665555443
Q ss_pred HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH-----hhcCCcccCcEEEeCCCCCCCCCCh
Q 016755 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTGKPSP 151 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~-----~~~gl~~~f~~i~~~~~~~~~kp~p 151 (383)
..+ ... ...+.||+.++|+.|++. ++++++||++...+...+. +.+|+..+|+.++++++++.+||+|
T Consensus 104 ~~~----~~~--~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~ 176 (229)
T 4dcc_A 104 AAW----NSF--LVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEP 176 (229)
T ss_dssp HHH----HTT--BCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCH
T ss_pred HHH----HHH--HHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCH
Confidence 322 222 124679999999999998 9999999999888775441 3468888999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
++|+.+++++|++|++|++|||+.+|+.+|+++|+.+++++++.
T Consensus 177 ~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 177 EIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred HHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 99999999999999999999999999999999999999998853
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=188.49 Aligned_cols=191 Identities=18% Similarity=0.234 Sum_probs=134.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
+|+|+|||||||+|+...+.. +.......+..... .......+ ...+.+..++...+ . . .....+.+ .+
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~--~-~~~~~~~~----~~ 70 (201)
T 2w43_A 1 MIILAFDIFGTVLDTSTVIQE-FRNKQLEYTWLLTIMGKYVEFEE-ITKITLRYILKVRG-E--E-SKFDEELN----KW 70 (201)
T ss_dssp CCEEEECCBTTTEEGGGSCHH-HHHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHHTT-C--G-GGHHHHHH----HH
T ss_pred CcEEEEeCCCceecchhHHHH-HHHHHHHHHHHHHHccCcccHHH-HHHHHHHHHHHHhC-C--h-HHHHHHHH----hh
Confidence 479999999999998655433 22222121100000 00000000 11223344444443 1 1 11122222 23
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
....++||+.+ |+.|+++ ++++++||++...+...+ +.+|+..+|+.+++++++..+||+|+++..+++++| |++
T Consensus 71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~ 145 (201)
T 2w43_A 71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE 145 (201)
T ss_dssp HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence 34788999999 9999999 999999999998888888 789999999999999999999999999999999999 999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCcc-ccccccchhhcccccc
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~ 214 (383)
|++|||+.+|+.+|+++|+.++++.++.... .....++.+++++.++
T Consensus 146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 193 (201)
T 2w43_A 146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL 193 (201)
T ss_dssp CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence 9999999999999999999999998854322 2233567888888775
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=184.21 Aligned_cols=200 Identities=21% Similarity=0.301 Sum_probs=141.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh---------hhhhhhcCC--C----HHHHHHHHHHHhCCCCCH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGK--T----PLEEAAIIVEDYGLPCAK 72 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~~~~~~g~--~----~~~~~~~~~~~~~~~~~~ 72 (383)
|+|+|+|||||||+|+...+..++.. +...+..... .......+. . ..+.+..++...+.+...
T Consensus 1 M~k~viFDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T 1qq5_A 1 MIKAVVFDAYGTLFDVQSVADATERA-YPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDE 79 (253)
T ss_dssp CCCEEEECTBTTTBCTTTTHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCH
T ss_pred CCcEEEEeCCCCCCccHhhHHHHHHH-HhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCCCCH
Confidence 37899999999999997655544331 1111100000 000011111 0 122333444444444332
Q ss_pred HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChH
Q 016755 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~ 152 (383)
.. . ..+...+....++||+.++|+.|+ |++++++||++...+...+ +.+|+..+|+.++++++.+.+||+|+
T Consensus 80 ~~-~----~~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~ 151 (253)
T 1qq5_A 80 SF-L----ADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPD 151 (253)
T ss_dssp HH-H----HHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHH
T ss_pred HH-H----HHHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccEEEEccccCCCCCCHH
Confidence 21 1 223334456789999999999998 8999999999999888888 78899999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecC-----------------------CCCc-cccccccchhh
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS-----------------------LPKQ-THRYTAADEVI 208 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~-----------------------~~~~-~~~~~~a~~vi 208 (383)
.++.+++++|++|++|++|||+.+|+.+|+++|+.++++++ +... ......++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 99999999999999999999999999999999999999987 2211 11234568888
Q ss_pred ccccccCc
Q 016755 209 NSLLDLRP 216 (383)
Q Consensus 209 ~~l~e~~~ 216 (383)
+++.++..
T Consensus 232 ~~~~el~~ 239 (253)
T 1qq5_A 232 PALGDLPR 239 (253)
T ss_dssp SSGGGHHH
T ss_pred CCHHHHHH
Confidence 88888643
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-24 Score=187.01 Aligned_cols=179 Identities=15% Similarity=0.158 Sum_probs=129.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcC-----------CCHHHHHHHHHHHhCCCCCHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-----------KTPLEEAAIIVEDYGLPCAKHE 74 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~ 74 (383)
++++|+|+||+||||+|+.. ..+...+.+++............+ ....+....+...++...+...
T Consensus 4 ~~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 80 (206)
T 2b0c_A 4 KEAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQ 80 (206)
T ss_dssp --CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHH
T ss_pred cccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHH
Confidence 45789999999999999862 122233344444332222222221 2333344444444444333332
Q ss_pred HHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh-cCCcccCcEEEeCCCCCCCCCChHH
Q 016755 75 FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDI 153 (383)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~-~gl~~~f~~i~~~~~~~~~kp~p~~ 153 (383)
+.. .+.. ....++||+.++|+.|+++|++++++||++...+...+ .. +|+..+|+.++++++.+.+||+|+.
T Consensus 81 ~~~----~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~ 153 (206)
T 2b0c_A 81 FSH----GWQA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARI 153 (206)
T ss_dssp HHH----HHHT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHH
T ss_pred HHH----HHHH--HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHH
Confidence 221 1111 12578999999999999999999999999877766555 44 6788889999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+..+++++|++|++|++|||+.+|+.+|+++|+.+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 154 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 99999999999999999999999999999999999999874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=187.18 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=140.0
Q ss_pred CCccc-cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCh------hhhhhhcCCC-HHHHHHHHHHHhCCCCCH
Q 016755 1 MAQPL-KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG------REKHKIVGKT-PLEEAAIIVEDYGLPCAK 72 (383)
Q Consensus 1 M~~~~-~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~g~~-~~~~~~~~~~~~~~~~~~ 72 (383)
|..+| +.++|+|+|||||||+|+...+..++.++++++|.+... .......|.. ....+..+.......
T Consensus 2 m~~~m~~~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 78 (231)
T 2p11_A 2 MQATTATPHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD--- 78 (231)
T ss_dssp -------CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---
T ss_pred CccccCCCCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---
Confidence 44443 256889999999999999999999999999988865432 1222223433 222222222221111
Q ss_pred HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChH
Q 016755 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~ 152 (383)
.....+.+.+........++||+.++|+.|+++| +++++||++...+...+ +.+|+..+|+.++.. ++++|.
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~K~~ 150 (231)
T 2p11_A 79 -TRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI-----YIHKEL 150 (231)
T ss_dssp -TGGGGGHHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE-----ESSGGG
T ss_pred -hHHHHHHHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe-----cCChHH
Confidence 1112223334343445789999999999999999 99999999999999888 788998888765542 234467
Q ss_pred HHHHHHHHcCCCCCcEEEEecChh---hhHHHHhcCCEEEEecCCCC--cccc--cc-ccchhhccccccCc
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVI---GVVAGKAAGMEVVAVPSLPK--QTHR--YT-AADEVINSLLDLRP 216 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~---Di~~a~~aG~~~i~v~~~~~--~~~~--~~-~a~~vi~~l~e~~~ 216 (383)
.+..+++ +++|++|++|||+.+ |+.+|+++|+.++++.++.. .... .. .++.+++++.++..
T Consensus 151 ~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~ 220 (231)
T 2p11_A 151 MLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVE 220 (231)
T ss_dssp CHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGG
T ss_pred HHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHH
Confidence 7777766 799999999999999 99999999999999988632 2111 11 26888899888643
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=176.26 Aligned_cols=102 Identities=21% Similarity=0.259 Sum_probs=91.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC-Cc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p-~e 167 (383)
...++||+.++|+.|+++|++++++|+.+...+...+ + .+|+.+++++++..+||+|+++..+++++|+.+ ++
T Consensus 34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~----~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 107 (196)
T 2oda_A 34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA----A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEG 107 (196)
T ss_dssp GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH----T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc----C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 4578999999999999999999999999888764333 2 467999999999999999999999999999976 89
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
|+||||+.+|+.+|+++|+.+|+|.++..
T Consensus 108 ~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 108 CVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp CEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 99999999999999999999999998653
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=175.78 Aligned_cols=126 Identities=19% Similarity=0.280 Sum_probs=110.6
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCcccCcEEEeCCCC----CCCCCChHHHHHHHHHc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---~~i~~~l~~~~gl~~~f~~i~~~~~~----~~~kp~p~~~~~~~~~l 161 (383)
...++||+.++|+.|+++|++++++||++. ..+...+ +.+|+..+|+.++++++. ..+||+|++|..+++++
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 568999999999999999999999999987 7788888 889999999999999886 78899999999999999
Q ss_pred CCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCcc--cc--ccccchhhc--cccccC
Q 016755 162 NMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQT--HR--YTAADEVIN--SLLDLR 215 (383)
Q Consensus 162 g~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~--~~--~~~a~~vi~--~l~e~~ 215 (383)
|++|++|++|||+ .+|+.+|+++|+.++++.++.... .. ...++.+++ ++.++.
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~ 171 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVP 171 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHH
T ss_pred CCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHH
Confidence 9999999999999 699999999999999998865421 11 226688888 887754
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-23 Score=180.33 Aligned_cols=186 Identities=14% Similarity=0.134 Sum_probs=128.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh--hhc-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIV-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~--~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
.++|+|+||+||||+|+... ..+.+.++......... ... .....+.+....... ..... +.+
T Consensus 2 ~~~k~vifDlDGTL~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~ 67 (217)
T 3m1y_A 2 SLQKLAVFDFDSTLVNAETI-----ESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKL-KNMPL--------KLA 67 (217)
T ss_dssp CCCEEEEEECBTTTBSSCHH-----HHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTT-TTCBH--------HHH
T ss_pred CCCcEEEEeCCCCCCCchhH-----HHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHh-cCCCH--------HHH
Confidence 46899999999999998542 23333444321111100 000 112222322222221 11111 122
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe----------CCCCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~----------~~~~~~~kp~p~~ 153 (383)
........++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++. +.+...+||+|.+
T Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 68 KEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp HHHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred HHHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence 233345789999999999999999999999999999998888 78899999988863 3345678999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
++.+++++|++|++|++|||+.+|+.+|+.+|+.+++ +. .+.....|+.++.+.
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINEP 200 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECSS
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeeccc
Confidence 9999999999999999999999999999999999877 22 223334567776543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=170.48 Aligned_cols=124 Identities=21% Similarity=0.276 Sum_probs=104.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEE-----eCCCCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-----GSDEVRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~-----~~~~~~~~k 148 (383)
..+++||+.++|+.|+++|++++++||++. ..+...+ +.+| .+|+.++ .+++...+|
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACRK 101 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSST
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCCC
Confidence 467999999999999999999999999986 4556666 5666 4456655 257788899
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc----ccccchhhccccccC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR 215 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~a~~vi~~l~e~~ 215 (383)
|+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++.+++++.++.
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~ 172 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVA 172 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHH
Confidence 9999999999999999999999999999999999999999999997654332 246789999998853
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=170.65 Aligned_cols=192 Identities=14% Similarity=0.155 Sum_probs=129.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
+++|+|+|||||||+|+.. +..+++.+|.... .+......+. ...+.+...+.... ...+. +.+.+
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~ 80 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ--PSREQ----VQRLI 80 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHC--CCHHH----HHHHH
T ss_pred hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhc--CCHHH----HHHHH
Confidence 4689999999999999964 3456777887643 2222233332 23333332222221 11111 11222
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCcEEE--------eCCCCCC----CCC
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIV--------GSDEVRT----GKP 149 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~~i~--------~~~~~~~----~kp 149 (383)
.. ...+++||+.++|+.|+++|++++++||++...++..+ +.+|+.. +|+.++ ++.+... .+|
T Consensus 81 ~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
T 1nnl_A 81 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 157 (225)
T ss_dssp HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred Hh--ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCc
Confidence 11 24679999999999999999999999999999998888 7888873 676553 3433322 468
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|+.+..+++++|+ ++|++|||+.+|+.+|+++|+ ++.+............++.+++++.++.
T Consensus 158 Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~ 220 (225)
T 1nnl_A 158 KGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELL 220 (225)
T ss_dssp HHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred hHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHH
Confidence 88999999999998 799999999999999999999 7777543222222335678888888753
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-23 Score=184.69 Aligned_cols=202 Identities=19% Similarity=0.221 Sum_probs=138.5
Q ss_pred CccEEEEecCCcccccHHHHHHH--HHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEV--LKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSM 82 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 82 (383)
++|+|+|||||||+|+...+..+ +.+.+++.|..... .....|.+.......+. ..+.+.+...+. ......
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~--~t~~~g~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 78 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVL--LTNYPSQTGQDLANRFA-TAGVDVPDSVFYTSAMATADF 78 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEE--EESCCSCCHHHHHHHHH-HTTCCCCGGGEEEHHHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEE--EECCCCCCHHHHHHHHH-HcCCCCCHHHeEcHHHHHHHH
Confidence 58999999999999986544444 44456677766532 22233556666555444 355543322110 111111
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEE---------------------------------EEeCCChHHHHHHHHhhc
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMA---------------------------------LASNSHRATIESKISYQH 129 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~---------------------------------i~s~~~~~~i~~~l~~~~ 129 (383)
.........+.|++.++++.+++.|++++ ++|+.+ ......+ ..+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~-~~~ 156 (250)
T 2c4n_A 79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY-PAC 156 (250)
T ss_dssp HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC-BCH
T ss_pred HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee-ecc
Confidence 22222345678899999999999999998 888866 3222222 223
Q ss_pred C-CcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCccccc----cc
Q 016755 130 G-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRY----TA 203 (383)
Q Consensus 130 g-l~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~~~~----~~ 203 (383)
+ +..+|+.+.+.+....+||+|.+++.+++++|++|++|++|||+ .||++|++.+|+.+++|.++....... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~ 236 (250)
T 2c4n_A 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR 236 (250)
T ss_dssp HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSC
T ss_pred hHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCC
Confidence 3 34445666666777889999999999999999999999999999 699999999999999999876543221 36
Q ss_pred cchhhcccccc
Q 016755 204 ADEVINSLLDL 214 (383)
Q Consensus 204 a~~vi~~l~e~ 214 (383)
|+.+++++.++
T Consensus 237 ~~~v~~~~~el 247 (250)
T 2c4n_A 237 PSWIYPSVAEI 247 (250)
T ss_dssp CSEEESSGGGC
T ss_pred CCEEECCHHHh
Confidence 78888888774
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=194.37 Aligned_cols=179 Identities=18% Similarity=0.186 Sum_probs=122.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhc------------CC-CHHHHHHHHHHH-------hC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GK-TPLEEAAIIVED-------YG 67 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~------------g~-~~~~~~~~~~~~-------~~ 67 (383)
++|+|+|||||||++... ..++.......+............ +. ...+....+... ..
T Consensus 2 ~~k~viFD~DGTL~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (555)
T 3i28_A 2 TLRAAVFDLDGVLALPAV--FGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAK 79 (555)
T ss_dssp --CEEEECTBTTTEESCT--HHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEecCCeeecchh--HHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccC
Confidence 589999999999997753 245555566666554322211100 11 111111111110 00
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCC------ChHHHHHHHHhhcCCcccCcEEEeC
Q 016755 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS------HRATIESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~------~~~~i~~~l~~~~gl~~~f~~i~~~ 141 (383)
....... .+.+.+........++||+.++|+.|+++|++++++||+ ....+...+ .++..+|+.++++
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~ 153 (555)
T 3i28_A 80 VCLPKNF---SIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIES 153 (555)
T ss_dssp CCCCTTC---CHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEH
T ss_pred CCCCccc---cHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEec
Confidence 0000000 022333334445789999999999999999999999998 333333222 2677899999999
Q ss_pred CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 142 ~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
++++.+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus 154 ~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 154 CQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred cccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999874
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-21 Score=170.84 Aligned_cols=124 Identities=23% Similarity=0.280 Sum_probs=103.9
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEEe------------C
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG------------S 141 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~~------------~ 141 (383)
..+++||+.++|+.|+++|++++++||++ ...+...+ +.+|+. |+.++. +
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccC
Confidence 46789999999999999999999999999 46677777 777886 676653 3
Q ss_pred CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE-EEecCCCCcccc-ccccchhhccccccC
Q 016755 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 142 ~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
++...+||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.+ +++.++...... ...++.+++++.++.
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~ 200 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP 200 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHH
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHH
Confidence 45678999999999999999999999999999999999999999999 999886543222 235688888888753
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=164.04 Aligned_cols=182 Identities=16% Similarity=0.073 Sum_probs=123.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhh-------h-hhhcCC-CHHHHHHHHHHHhCCCCCHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGRE-------K-HKIVGK-TPLEEAAIIVEDYGLPCAKHEFV 76 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~-------~-~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 76 (383)
+++++|+|||||||+|+...+ .+...+...+.. ..... . ....+. ............+ ...+.+++.
T Consensus 2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLL-AAHSPVELA 78 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH-HTSCHHHHH
T ss_pred CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHh-cCCCHHHHH
Confidence 457899999999999997653 444445454443 11110 0 011122 2233332222222 123344444
Q ss_pred HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC----------CCCC
Q 016755 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRT 146 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~----------~~~~ 146 (383)
....+.+..... ..++||+.++|+.|+++|++++++|+++...++..+ +.+|+..++...+... ....
T Consensus 79 ~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 79 AWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSF 156 (232)
T ss_dssp HHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSS
T ss_pred HHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCc
Confidence 444444444332 257999999999999999999999999999999888 7889876554332211 2334
Q ss_pred CCCChHHHHHHHHHcC---CCCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 147 GKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg---~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+++++..++.+++++| ++|++|++|||+.+|+.+++.+|+.+++.+.
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 6778899999999999 9999999999999999999999998876443
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-22 Score=181.35 Aligned_cols=126 Identities=15% Similarity=0.144 Sum_probs=99.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH--HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~--i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
...++|++.++|+.|+ +|+++ ++||..... ....+....++..+|+.++++++...+||+|++|..+++++|++|+
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 201 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE 201 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence 3457899999999997 88987 889987643 1111112233555678888888888999999999999999999999
Q ss_pred cEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc-c---cccchhhccccccCc
Q 016755 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLRP 216 (383)
Q Consensus 167 e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~-~---~~a~~vi~~l~e~~~ 216 (383)
+|++|||++ +|+.+|+++|+.+++|.++...... . ..|+++++++.++..
T Consensus 202 ~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 202 QVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred HEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 999999995 9999999999999999987654322 1 157899999988644
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-22 Score=178.92 Aligned_cols=204 Identities=16% Similarity=0.164 Sum_probs=134.9
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHH--HHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH---HH
Q 016755 5 LKKLMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EV 79 (383)
Q Consensus 5 ~~~~ik~viFDlDGTL~d~~~~~~~a~~--~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 79 (383)
+++++|+|+|||||||+|+...+..++. ..+++.|..+. ......+........ .+..++.+.+...+.. ..
T Consensus 3 ~~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~--~~t~~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~ 79 (259)
T 2ho4_A 3 ARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVR--FVTNTTKETKKDLLE-RLKKLEFEISEDEIFTSLTAA 79 (259)
T ss_dssp ---CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEE--EEECCSSCCHHHHHH-HHHHTTCCCCGGGEEEHHHHH
T ss_pred chhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEE--EEeCCCCcCHHHHHH-HHHHcCCCccHHHeecHHHHH
Confidence 3457999999999999998765443332 34555665431 122222444444444 3455666544222110 00
Q ss_pred HHHHHh---------------hh----------------ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh
Q 016755 80 YSMFSD---------------HL----------------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128 (383)
Q Consensus 80 ~~~~~~---------------~~----------------~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~ 128 (383)
...... .+ ....++|++.++++.|+ .|+++ ++||.........+ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~~ 156 (259)
T 2ho4_A 80 RNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-LA 156 (259)
T ss_dssp HHHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-EE
T ss_pred HHHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-cc
Confidence 011111 00 01136789999999999 89999 99998766544444 56
Q ss_pred cCCcccCc---EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCC-cccc---
Q 016755 129 HGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR--- 200 (383)
Q Consensus 129 ~gl~~~f~---~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~-~~~~--- 200 (383)
.++..+|+ .++++++...+||+|++++.+++++|++|++|++|||+. +|+.+|+++|+.++++.++.. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~ 236 (259)
T 2ho4_A 157 LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKI 236 (259)
T ss_dssp ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGS
T ss_pred cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCccccccc
Confidence 67777776 556777888899999999999999999999999999999 999999999999999998732 2211
Q ss_pred ccccchhhcccccc
Q 016755 201 YTAADEVINSLLDL 214 (383)
Q Consensus 201 ~~~a~~vi~~l~e~ 214 (383)
...++.+++++.++
T Consensus 237 ~~~~~~~~~~l~~l 250 (259)
T 2ho4_A 237 NPPPYLTCESFPHA 250 (259)
T ss_dssp SSCCSEEESCHHHH
T ss_pred CCCCCEEECCHHHH
Confidence 23567888888775
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=176.71 Aligned_cols=170 Identities=13% Similarity=0.132 Sum_probs=121.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh--hhcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~--~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (383)
..++|+|+|||||||+|+... ..++..+|......... ...+. ...+.+...+.... . ...+.
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~-~-~~~~~------- 170 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLK-G-TPKAV------- 170 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT-T-CBHHH-------
T ss_pred CCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-C-CCHHH-------
Confidence 357899999999999998653 33344555432211111 11111 22233332222211 1 11111
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe----------CCCCCCCCCChH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPD 152 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~----------~~~~~~~kp~p~ 152 (383)
+........++||+.++|+.|+++|++++++||+....++..+ +.+|+..+|+.++. ..+...+||+|+
T Consensus 171 i~~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~ 249 (317)
T 4eze_A 171 LNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQ 249 (317)
T ss_dssp HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred HHHHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHH
Confidence 1222235789999999999999999999999999999999888 88999888887654 233456799999
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+..+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 250 ~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 250 TLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 99999999999999999999999999999999998877
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=161.42 Aligned_cols=159 Identities=18% Similarity=0.175 Sum_probs=117.4
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC------ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW------DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (383)
+|+|+|||||||+| .++..+++.+|.+. .........+.. ...+. ..+. +.+.+ .+
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~--~~~~~----~~- 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR----LRILD-EHGL--KLGDI----QE- 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH----HHHHH-HTTC--CHHHH----HH-
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH----HHHHH-HCCC--CHHHH----HH-
Confidence 68999999999999 35677777887653 111111211111 11111 1122 22221 11
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCC---CCCChHHHHHHH
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRT---GKPSPDIFLEAA 158 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~---~kp~p~~~~~~~ 158 (383)
......++||+.++|+.|+++ ++++++||++...+...+ +.+|+..+| +.++++.+... .+|+|..+..++
T Consensus 64 ---~~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l 138 (206)
T 1rku_A 64 ---VIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 138 (206)
T ss_dssp ---HHTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred ---HHHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHH
Confidence 234678999999999999999 999999999999888888 788999988 56777666532 158899999999
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++++..|++|++|||+.+|+.+|+++|+.+++
T Consensus 139 ~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred HHHHhcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence 99999999999999999999999999998764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-20 Score=150.54 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=93.8
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VG 172 (383)
+||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+.++++++....||+|+.+..+++++|++|++|++||
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg 98 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD 98 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence 467788999999999999999999988888878 7788899999999999999999999999999999999999999999
Q ss_pred cChhhhHHHHhcCCEEEEecCC
Q 016755 173 DSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 173 Ds~~Di~~a~~aG~~~i~v~~~ 194 (383)
|+.+|+.+|+++|+.++++.++
T Consensus 99 D~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 99 DSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp SCHHHHHHHHHHTCEEEECSCH
T ss_pred CCHHHHHHHHHCCCEEEEeCCh
Confidence 9999999999999999998773
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.6e-20 Score=160.87 Aligned_cols=189 Identities=17% Similarity=0.194 Sum_probs=121.4
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh--hhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
.++|+|+|||||||+|+.. +..+.+.+|........ +...+ ....+.+....... ....... +
T Consensus 3 ~~~k~i~fDlDGTL~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~ 68 (211)
T 1l7m_A 3 KKKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDLPIEK--------V 68 (211)
T ss_dssp CCCEEEEEECCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTCBHHH--------H
T ss_pred cCCcEEEEeCCCCCCCccH-----HHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHh-cCCCHHH--------H
Confidence 4689999999999999953 24445555543211111 11111 12222211111101 0011111 1
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----------CCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----------~~~~kp~p~~ 153 (383)
.+.+....+.|++.++|+.++++|++++++|+++...+...+ +.+++..+|..++...+ ...++++|..
T Consensus 69 ~~~~~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 147 (211)
T 1l7m_A 69 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 147 (211)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHHHhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHH
Confidence 122234567899999999999999999999999888777766 67787766654432211 1235678899
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc--cccc
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDL 214 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~--l~e~ 214 (383)
+..+++++|++|++|++|||+.||+++++.+|+.+++ .. .+.....++.++.+ +.++
T Consensus 148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~-~~---~~~~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 148 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CA---KPILKEKADICIEKRDLREI 206 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEE-SC---CHHHHTTCSEEECSSCGGGG
T ss_pred HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEE-CC---CHHHHhhcceeecchhHHHH
Confidence 9999999999999999999999999999999997543 32 12223356777777 6664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=162.29 Aligned_cols=189 Identities=15% Similarity=0.141 Sum_probs=124.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhhc-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
.|+++|+|||||||+|++... .+++.++. ...... .... + .+..+.+..++...... ..++ +.+.+
T Consensus 4 ~~~k~viFD~DGTL~d~ds~~-----~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~----~~~~~ 72 (236)
T 2fea_A 4 TRKPFIICDFDGTITMNDNII-----NIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPSS-LKEE----ITSFV 72 (236)
T ss_dssp CCCEEEEECCTTTTBSSCHHH-----HHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBGG-GHHH----HHHHH
T ss_pred CCCcEEEEeCCCCCCccchHH-----HHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCCC-hHHH----HHHHH
Confidence 357899999999999663221 11222221 111111 1122 2 34555555554432111 1222 22211
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCC--------CCCChHH-H
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-F 154 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~--------~kp~p~~-~ 154 (383)
.....++||+.++|+.|+++|++++++||++...++..+ + |+..+ +.++++++... .||+|.. +
T Consensus 73 ---~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~ 145 (236)
T 2fea_A 73 ---LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCS 145 (236)
T ss_dssp ---HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCC
T ss_pred ---hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccc
Confidence 235789999999999999999999999999998888887 5 77665 88888776543 7888884 5
Q ss_pred H-------HHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccccc-ccchhhccccccC
Q 016755 155 L-------EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT-AADEVINSLLDLR 215 (383)
Q Consensus 155 ~-------~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~-~a~~vi~~l~e~~ 215 (383)
. .++++++++|++|++|||+.+|+.+|+++|+.++. .+........ .++.+++++.++.
T Consensus 146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~~~~~~~~~~~~~~~~~~~el~ 212 (236)
T 2fea_A 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYLLNECREQNLNHLPYQDFYEIR 212 (236)
T ss_dssp SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHHHHHHHHTTCCEECCSSHHHHH
T ss_pred cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHHHHHHHHCCCCeeecCCHHHHH
Confidence 4 88899999999999999999999999999998863 1111111111 2567788887753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-21 Score=166.18 Aligned_cols=155 Identities=13% Similarity=0.218 Sum_probs=116.4
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (383)
.++|+|||||||+|+...+..++.++++ |.+ .+.+.+... ...+.+.. . .+ +....+.+.+.+.
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~---~~~~~~~~----~-~~----~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGF---LAREQYRA----L-RP----DLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSS---CHHHHHHH----H-CT----THHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHh---hHHHHHHH----H-hH----HHHHHHHHHHHhcC
Confidence 4799999999999999999999988876 665 444433322 12222222 1 11 1233444444443
Q ss_pred -hccCCCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCC
Q 016755 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (383)
Q Consensus 87 -~~~~~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~ 164 (383)
.....++||+.++|+.|+++ |++++++||++...+...+ +.+|+ |+.++++ .+++++|++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~--------------~~~~~~~~~ 129 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGP--------------QFVERIILT 129 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCH--------------HHHTTEEEC
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCH--------------HHHHHcCCC
Confidence 24578999999999999999 9999999999988877777 66666 6666553 268899999
Q ss_pred CCcEEEEecChhh----hHHHH-hcCCEEEEecCCC
Q 016755 165 PSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLP 195 (383)
Q Consensus 165 p~e~l~VGDs~~D----i~~a~-~aG~~~i~v~~~~ 195 (383)
|++|++|||+.+| +.+|+ ++|+.++++++..
T Consensus 130 ~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~ 165 (193)
T 2i7d_A 130 RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCH 165 (193)
T ss_dssp SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGG
T ss_pred cccEEEECCchhhCcHHHhhcccccccceEEEEecc
Confidence 9999999999998 99999 9999999998753
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-20 Score=162.52 Aligned_cols=173 Identities=15% Similarity=0.208 Sum_probs=124.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (383)
++++|+|||||||+|+...+..+++++++.+ ...+.+. ..+.+..+.+.. +. + .. ...+...+.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~----~~-~---~~-~~~~~~~~~~~~ 69 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQ-PFIALED---RRGFWVSEQYGR----LR-P---GL-SEKAISIWESKN 69 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTS-CCCCGGG---CCSSCHHHHHHH----HS-T---TH-HHHHHHHHTSTT
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcC-CCCCHHH---hcCCcHHHHHHh----cC-H---HH-HHHHHHHHHhhh
Confidence 5789999999999999999999999888766 2333332 223344333322 21 1 11 12222334332
Q ss_pred -hccCCCCchHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcc-cCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 87 -~~~~~~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.....++||+.++|+.|+++ |++++++||++...+...+ +++|+.. +|+ ..+++++|+
T Consensus 70 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~ 130 (197)
T 1q92_A 70 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVL 130 (197)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEE
T ss_pred hhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhcc
Confidence 23578999999999999999 9999999999988777777 6677776 665 557789999
Q ss_pred CCCcEEEEecChhh----hHHHH-hcCCEEEEecCCCCccccccccchhhcccc
Q 016755 164 EPSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 164 ~p~e~l~VGDs~~D----i~~a~-~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
+|++|++|||+..| +.+|+ ++|+.+++++++............+++++.
T Consensus 131 ~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~ 184 (197)
T 1q92_A 131 TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWA 184 (197)
T ss_dssp CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTT
T ss_pred CCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHH
Confidence 99999999999998 99999 999999999876443322211123577774
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=150.38 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=92.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCC-hHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~-~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
...++||+.++|+.|+++|++++++||++ ...+...+ +.+|+..+|+.+++. .+|+|+.+..+++++|++|++
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 139 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFSQ 139 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGGG
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChHH
Confidence 46789999999999999999999999998 68888888 788999999987543 257899999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
|++|||+.+|+.+|+++|+.++++.++..
T Consensus 140 ~~~igD~~~Di~~a~~aG~~~i~v~~g~~ 168 (187)
T 2wm8_A 140 MIFFDDERRNIVDVSKLGVTCIHIQNGMN 168 (187)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred EEEEeCCccChHHHHHcCCEEEEECCCCC
Confidence 99999999999999999999999998654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-19 Score=175.42 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=119.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-h-hcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-K-IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
.++|+|+|||||||+++... ..+.+..|......... . ..+ ....+.+...+..+. ..... . +
T Consensus 183 ~~~k~viFD~DgTLi~~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~-~-------~ 248 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEVI-----EMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA-GLPAT-V-------I 248 (415)
T ss_dssp TCCCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTT-TCBTH-H-------H
T ss_pred cCCcEEEEcCcccCcCCchH-----HHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhc-CCCHH-H-------H
Confidence 57899999999999998632 33444455422111111 1 111 122333333332221 11111 1 1
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE-------e---CCCCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------G---SDEVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~-------~---~~~~~~~kp~p~~ 153 (383)
........++||+.++|+.|+++|++++++||+...+++..+ +.+|+..+|...+ + ..+...+||+|+.
T Consensus 249 ~~~~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~ 327 (415)
T 3p96_A 249 DEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATA 327 (415)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred HHHHHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHH
Confidence 122234689999999999999999999999999999999888 8889987765432 2 2345568999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++.+++++|++|++|++|||+.+|+.+++.+|+.+++
T Consensus 328 ~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 328 LREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 9999999999999999999999999999999998876
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.3e-20 Score=160.76 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=93.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccCcE-EEe-CCC----CCCCCCChHHHHHHH-H
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSV-IVG-SDE----VRTGKPSPDIFLEAA-K 159 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~--~~f~~-i~~-~~~----~~~~kp~p~~~~~~~-~ 159 (383)
...++||+.++++.|+++|++++++|++....+...+ +.+|+. .+|.. ++. .+. +...+|++..+..++ +
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (219)
T 3kd3_A 80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK 158 (219)
T ss_dssp TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence 4568899999999999999999999999999988888 778884 34442 222 332 245677765555544 5
Q ss_pred HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc--cccccccchhhcccccc
Q 016755 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDL 214 (383)
Q Consensus 160 ~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~--~~~~~~a~~vi~~l~e~ 214 (383)
.+|++|++|++|||+.+|+.++ ++|+.++++..+... ......++++++++.++
T Consensus 159 ~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el 214 (219)
T 3kd3_A 159 AKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL 214 (219)
T ss_dssp HGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred HhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence 6699999999999999999998 689987776654322 22234578888888875
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-19 Score=155.66 Aligned_cols=125 Identities=21% Similarity=0.281 Sum_probs=104.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEE-eC-----------
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS----------- 141 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~-~~----------- 141 (383)
...++||+.++|+.|+++|++++++||++. ..+...+ +.+|+. |+.++ +.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeecc
Confidence 457899999999999999999999999987 6677777 677764 55543 43
Q ss_pred CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE-EEecCCCCccc-cccccchhhccccccCc
Q 016755 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTH-RYTAADEVINSLLDLRP 216 (383)
Q Consensus 142 ~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~-~~~~a~~vi~~l~e~~~ 216 (383)
++...+||+|.++..+++++|++|++|++|||+.+|+.+|+++|+.+ +++.++..... ....++.+++++.++..
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~ 207 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLA 207 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHH
Confidence 56778999999999999999999999999999999999999999999 99988754332 23457888888887643
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-19 Score=150.27 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=89.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCC---------------ChHHHHHHHHhhcCCcccCcEEEeC-----CCCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTGK 148 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~---------------~~~~i~~~l~~~~gl~~~f~~i~~~-----~~~~~~k 148 (383)
..+++||+.++|+.|+++|++++++||+ ....+...+ +.+|+. |+.++.+ ++....|
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCRK 116 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSST
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCcccccccC
Confidence 4578999999999999999999999998 566677777 778886 7888644 7888999
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 117 P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 117 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 99999999999999999999999999999999999999999998853
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-19 Score=168.15 Aligned_cols=197 Identities=17% Similarity=0.176 Sum_probs=140.0
Q ss_pred cCCcccccHHHHHHHHHHHHHH-cCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH--HHHHHHHhh---hcc
Q 016755 16 LDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN--EVYSMFSDH---LCK 89 (383)
Q Consensus 16 lDGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~ 89 (383)
+|||.... ..+..+|.+.... .+.. .+......|.+..+....+...++.+....++.. .+.+..... ...
T Consensus 137 fD~t~~~~-d~i~~~l~~~a~~~~~i~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (384)
T 1qyi_A 137 LDNVKVGK-NNIYAALEEFATTELHVS--DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEII 213 (384)
T ss_dssp HTTCCSSH-HHHHHHHHHHHHHHTTCS--CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCB
T ss_pred hcCCCccH-HHHHHHHHHHHHHhCCCC--HHHHHHhcCCCHHHHHHHHHHHcCCccCHHHHHhHHHHHHHHHHHHhhccC
Confidence 36777544 3345667766654 3553 3344556666666666666554421100000000 000000000 124
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCc--EEEeCCCCC-----------CCCCChHHHHH
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPDIFLE 156 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~--~i~~~~~~~-----------~~kp~p~~~~~ 156 (383)
..++||+.++|+.|+++|++++++||++...+...+ +.+|+..+|+ .++++++.. .+||+|++|..
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 578999999999999999999999999999998888 7889999999 899988765 48999999999
Q ss_pred HHHHcC--------------CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCc---ccc--ccccchhhccccccCc
Q 016755 157 AAKRLN--------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---THR--YTAADEVINSLLDLRP 216 (383)
Q Consensus 157 ~~~~lg--------------~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~---~~~--~~~a~~vi~~l~e~~~ 216 (383)
+++++| ++|++|++|||+.+|+.+|+++|+.++++.++... ... ...++.+++++.++..
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~ 371 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRG 371 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHH
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHH
Confidence 999999 89999999999999999999999999999986532 111 2357889999988643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-18 Score=147.26 Aligned_cols=183 Identities=20% Similarity=0.112 Sum_probs=115.9
Q ss_pred CccEEE-EecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhh-cCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 8 LMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI-VGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 8 ~ik~vi-FDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
+++.++ |||||||+|+. ++..+.+.+|........... .+. ...+.......... .... +.+.
T Consensus 7 ~mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~ 72 (201)
T 4ap9_A 7 FMKKVAVIDIEGTLTDFE-----FWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLIR-GIDE--------GTFL 72 (201)
T ss_dssp GGSCEEEEECBTTTBCCC-----HHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHTT-TCBH--------HHHH
T ss_pred hcceeEEecccCCCcchH-----HHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCCH--------HHHH
Confidence 455555 99999999987 556666666651100001111 111 11222211111110 0011 1233
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCC-CCCCChHHHHHHHHHcCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~-~~kp~p~~~~~~~~~lg~ 163 (383)
.......+.||+.++|+.|+++|++++++|++....+... +.+|+..+++.+.+.++.. ..+|.+.....+++++
T Consensus 73 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l-- 148 (201)
T 4ap9_A 73 RTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF--KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF-- 148 (201)
T ss_dssp HGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG--TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--
T ss_pred HHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--
Confidence 3445678999999999999999999999999887766544 5678876655555444322 2355555566677777
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccccC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~~ 215 (383)
+|++|++|||+.+|+.+++.+|+.+++.+. .. .++.++.++.++.
T Consensus 149 ~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~-~~------~ad~v~~~~~el~ 193 (201)
T 4ap9_A 149 RDGFILAMGDGYADAKMFERADMGIAVGRE-IP------GADLLVKDLKELV 193 (201)
T ss_dssp TTSCEEEEECTTCCHHHHHHCSEEEEESSC-CT------TCSEEESSHHHHH
T ss_pred CcCcEEEEeCCHHHHHHHHhCCceEEECCC-Cc------cccEEEccHHHHH
Confidence 999999999999999999999998544333 22 5578888887753
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-18 Score=153.87 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=80.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC---CCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD---EVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~---~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.+.|++.++|+.|+++|++++++||++...+...+ +. +..+|+.++.+. .+...||+|+.+..+++++|+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence 46789999999999999999999999866554444 22 344556653322 245689999999999999998
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
|++|||+.+|+.+|+++|+.++++.++..
T Consensus 161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 161 RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999988643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-18 Score=147.00 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=86.2
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VG 172 (383)
.|+..++|+.|+++|++++++||++...+...+ +.+|+..+|+. +||+|+.+..++++++++|++|++||
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 355689999999999999999999999998888 78888655432 79999999999999999999999999
Q ss_pred cChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 173 Ds~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
|+.+|+.+|+.+|+.+++.+. .+.....++++++++.+
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA---VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCc---cHHHHhhCCEEecCCCC
Confidence 999999999999998765422 22222345677776654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.8e-19 Score=160.18 Aligned_cols=203 Identities=15% Similarity=0.161 Sum_probs=118.5
Q ss_pred cCCccEEEEecCCcccccH-------HHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH--
Q 016755 6 KKLMSCVILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV-- 76 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~-------~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 76 (383)
++++|+|+|||||||+|+. .....+ ...+++.|..+. ......|.+....... +..++.+.+...+.
T Consensus 9 m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~G~~~~--~~t~~~gr~~~~~~~~-l~~~g~~~~~~~~~~~ 84 (271)
T 2x4d_A 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRSRLKVR--FCTNESAASRAELVGQ-LQRLGFDISEQEVTAP 84 (271)
T ss_dssp TTTCCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHSSSEEE--EECCCCSSCHHHHHHH-HHHTTCCCCGGGEECH
T ss_pred HhcCCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHCCCcEE--EEECCCCCCHHHHHHH-HHHCCCCCCHHHeecH
Confidence 4568999999999999953 222222 344567776543 2223335555555443 34556543321111
Q ss_pred -HHHHHHHHhhh--ccCC-----------------------------CCchHHHHHHHHHHC-CCCEEEEeCCChHHHHH
Q 016755 77 -NEVYSMFSDHL--CKVK-----------------------------ALPGANRLIKHLSCH-GVPMALASNSHRATIES 123 (383)
Q Consensus 77 -~~~~~~~~~~~--~~~~-----------------------------~~pg~~~lL~~L~~~-G~~~~i~s~~~~~~i~~ 123 (383)
......+.... .... .++++.+.++.+++. |+++ ++++........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~ 163 (271)
T 2x4d_A 85 APAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVL-ISLGKGRYYAAT 163 (271)
T ss_dssp HHHHHHHHHHHTCCEEEECCGGGGGGGTTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCE-EEECCCSEEEET
T ss_pred HHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeE-EEEcCCcccccC
Confidence 11111111110 0011 234556666666665 6666 555443322111
Q ss_pred HHHhhcCCcccCc---EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCc-c
Q 016755 124 KISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-T 198 (383)
Q Consensus 124 ~l~~~~gl~~~f~---~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~-~ 198 (383)
.+ ...++..+|+ ...+.+....+||+|.+++.+++++|++|++|++|||+. ||+.|++.+|+.+++|.++... .
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~ 242 (271)
T 2x4d_A 164 SG-LMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS 242 (271)
T ss_dssp TE-EEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGG
T ss_pred CC-cccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCch
Confidence 11 1122222221 223344566799999999999999999999999999999 9999999999999999987332 2
Q ss_pred cc---ccccchhhcccccc
Q 016755 199 HR---YTAADEVINSLLDL 214 (383)
Q Consensus 199 ~~---~~~a~~vi~~l~e~ 214 (383)
.. ...++.+++++.++
T Consensus 243 ~~~~~~~~~~~~~~~~~el 261 (271)
T 2x4d_A 243 DEHHPEVKADGYVDNLAEA 261 (271)
T ss_dssp GGGCSSCCCSEEESSHHHH
T ss_pred hhcccCCCCCEEeCCHHHH
Confidence 11 13468888888775
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-18 Score=161.13 Aligned_cols=169 Identities=19% Similarity=0.189 Sum_probs=117.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-h-cC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
...++|+||+||||++.. .+..+++..|.......... . .+ ....+.....+..+.. .... .+
T Consensus 105 ~~~~~viFD~DgTLi~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~-------~~ 170 (335)
T 3n28_A 105 TKPGLIVLDMDSTAIQIE-----CIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKD--APEQ-------IL 170 (335)
T ss_dssp TSCCEEEECSSCHHHHHH-----HHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTT--CBTT-------HH
T ss_pred cCCCEEEEcCCCCCcChH-----HHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcC--CCHH-------HH
Confidence 356899999999999843 33344444443321111111 1 11 1222222222221110 0111 11
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEE----------eCCCCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV----------GSDEVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~----------~~~~~~~~kp~p~~ 153 (383)
.......+++||+.++++.|++.|++++++|++....++..+ +.+|+..+|+..+ ..++...+||+|+.
T Consensus 171 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~ 249 (335)
T 3n28_A 171 SQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADI 249 (335)
T ss_dssp HHHHTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHH
T ss_pred HHHHHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHH
Confidence 222235789999999999999999999999999998888888 7889987776543 12356678999999
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++.+++++|++|++|++|||+.||+.|++.+|+.+++
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999999999999999998877
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-19 Score=164.56 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=93.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHH---HHHhhcCCcccCcEEEeCCC-CCCCCCChHHHHHHHHHcCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~---~l~~~~gl~~~f~~i~~~~~-~~~~kp~p~~~~~~~~~lg~~p 165 (383)
..++|++.++++.+ ..|+++ ++||........ .+ ...++..+|+.+++.++ ...+||+|.+++.+++++|++|
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~ 212 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVP-DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPK 212 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEE-CHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCG
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccc-cccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCC
Confidence 34678999999999 788887 888876432211 11 22234445566667777 8899999999999999999999
Q ss_pred CcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhcccccc
Q 016755 166 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL 214 (383)
Q Consensus 166 ~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l~e~ 214 (383)
++|++|||++ ||+.||+.+|+.++++.++....... ..++.+++++.++
T Consensus 213 ~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el 266 (271)
T 1vjr_A 213 ERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 266 (271)
T ss_dssp GGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred ceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 9999999995 99999999999999999875432221 2567888888774
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.71 E-value=7.3e-18 Score=155.96 Aligned_cols=189 Identities=17% Similarity=0.223 Sum_probs=126.2
Q ss_pred CccEEEEecCCcccccHHHHH----------------------------HHHHHHHHHcCCCC-ChhhhhhhcCCCHHH-
Q 016755 8 LMSCVILDLDGTLLNTDGMFS----------------------------EVLKTFLVKYGKEW-DGREKHKIVGKTPLE- 57 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~----------------------------~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~- 57 (383)
++++|+||+||||+|+...+. .++.++++++|.+. +.+.+....|.+...
T Consensus 31 ~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 110 (287)
T 3a1c_A 31 KVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD 110 (287)
T ss_dssp HCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEET
T ss_pred cCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEEE
Confidence 589999999999999976553 78888888888763 333333333332211
Q ss_pred -H---HHHHHHHhCCCCCHHHHHHHHHHHHHh------------h-----hccCCCCchHHHHHHHHHHCCCCEEEEeCC
Q 016755 58 -E---AAIIVEDYGLPCAKHEFVNEVYSMFSD------------H-----LCKVKALPGANRLIKHLSCHGVPMALASNS 116 (383)
Q Consensus 58 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~ 116 (383)
. ...++...+.+.+ ..+ ..+...+.. . .....++||+.++|+.|+++|++++++|++
T Consensus 111 ~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 111 GILVGNKRLMEDFGVAVS-NEV-ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp TEEEECHHHHHHTTCCCC-HHH-HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEECCHHHHHhcCCCcc-HHH-HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 0 0011222222221 111 122222221 0 124679999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 117 HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 117 ~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
+...+...+ +.+|+..+|+.++ |. ....++++++.. ++|++|||+.+|+.+++++|+.+. +...
T Consensus 189 ~~~~~~~~l-~~~gl~~~f~~i~---------~~--~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~-~~~~-- 252 (287)
T 3a1c_A 189 NWRSAEAIS-RELNLDLVIAEVL---------PH--QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIA-VGSG-- 252 (287)
T ss_dssp CHHHHHHHH-HHHTCSEEECSCC---------TT--CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEE-ECCC--
T ss_pred CHHHHHHHH-HHhCCceeeeecC---------hH--HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEE-eCCC--
Confidence 999888888 7889877766543 11 226788899999 999999999999999999999844 3332
Q ss_pred ccccccccchhh--cccccc
Q 016755 197 QTHRYTAADEVI--NSLLDL 214 (383)
Q Consensus 197 ~~~~~~~a~~vi--~~l~e~ 214 (383)
.+.....++.++ .++.++
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l 272 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDV 272 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHH
T ss_pred CHHHHhhCCEEEeCCCHHHH
Confidence 122233567777 666664
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-19 Score=162.64 Aligned_cols=119 Identities=18% Similarity=0.276 Sum_probs=96.3
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHH--HH-HHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc----CCCCCc
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPSS 167 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i--~~-~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l----g~~p~e 167 (383)
....+++.|+++|++ +++||.+.... .. .+....++..+|+.+++++++..+||+|++|..+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 667777789999999 99999976654 21 11134567778899999998889999999999999999 999999
Q ss_pred EEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc-c-------cccchhhcccccc
Q 016755 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y-------TAADEVINSLLDL 214 (383)
Q Consensus 168 ~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~-~-------~~a~~vi~~l~e~ 214 (383)
|+||||++ +|+.+|+++|+.++++.++...... . ..|+++++++.++
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999996 9999999999999999987543322 1 3567888887764
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-18 Score=162.56 Aligned_cols=125 Identities=18% Similarity=0.275 Sum_probs=99.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHH--H-HHHHhhcC-CcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i--~-~~l~~~~g-l~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
..++|++.++++.|++.|+ ++++||.+.... . ..+ ...| +..+|+.++++++...+||+|.+|+.+++++|++|
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCCh
Confidence 3457899999999999898 999999876543 1 122 2333 55566777788888899999999999999999999
Q ss_pred CcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc----------ccccchhhccccccCc
Q 016755 166 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLDLRP 216 (383)
Q Consensus 166 ~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~----------~~~a~~vi~~l~e~~~ 216 (383)
++|++|||++ +|+.+|+.+|+.+++|.++...... ...|+++++++.++..
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~ 294 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTE 294 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGG
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHH
Confidence 9999999997 9999999999999999987543221 1357889999988643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-18 Score=158.05 Aligned_cols=191 Identities=17% Similarity=0.176 Sum_probs=120.3
Q ss_pred cCCccEEEEecCCcccc----------------------------cHHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHH
Q 016755 6 KKLMSCVILDLDGTLLN----------------------------TDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPL 56 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d----------------------------~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g~~~~ 56 (383)
++++|+|+||+||||+| +.+.+..++.++++..|..... .......+.+..
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~ 89 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE 89 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence 45799999999999999 8888888999999888876432 222222222111
Q ss_pred HHH---------HHHHHHhCCCCCHHHHHHHHHHHHHhhh-----c--------cCCCCchHHHHHHHHHHCCCCEEEEe
Q 016755 57 EEA---------AIIVEDYGLPCAKHEFVNEVYSMFSDHL-----C--------KVKALPGANRLIKHLSCHGVPMALAS 114 (383)
Q Consensus 57 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~pg~~~lL~~L~~~G~~~~i~s 114 (383)
... ..++...+..... ....+........ . ...++||+.++|+.|+++|++++++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T 167 (280)
T 3skx_A 90 GIVNGRRYMVVSPGYIRELGIKTDE--SVEKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLT 167 (280)
T ss_dssp EEETTEEEEEECHHHHHHTTCCCCT--THHHHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEECCEEEEEecHHHHHHcCCCchH--HHHHHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEe
Confidence 000 1233333433221 1111111000000 0 01688999999999999999999999
Q ss_pred CCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 115 ~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+.+...+...+ +.+|+..+|+.+++++.. ...+...+.+ +|++|||+.||+.|++.+|+.+++ +
T Consensus 168 ~~~~~~~~~~~-~~~gl~~~f~~~~~~~k~-------~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~---~ 231 (280)
T 3skx_A 168 GDNRFVAKWVA-EELGLDDYFAEVLPHEKA-------EKVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAI---G 231 (280)
T ss_dssp SSCHHHHHHHH-HHHTCSEEECSCCGGGHH-------HHHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEEC---S
T ss_pred CCCHHHHHHHH-HHcCChhHhHhcCHHHHH-------HHHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEe---c
Confidence 99999988888 788998888877765433 3333333332 899999999999999999974443 3
Q ss_pred CCccccccccchhh--cccccc
Q 016755 195 PKQTHRYTAADEVI--NSLLDL 214 (383)
Q Consensus 195 ~~~~~~~~~a~~vi--~~l~e~ 214 (383)
+........++.++ +++.++
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~l 253 (280)
T 3skx_A 232 AGTDVAVETADIVLVRNDPRDV 253 (280)
T ss_dssp CCSSSCCCSSSEECSSCCTHHH
T ss_pred CCcHHHHhhCCEEEeCCCHHHH
Confidence 32222222334444 555553
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=135.06 Aligned_cols=162 Identities=11% Similarity=0.114 Sum_probs=107.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-h-
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS-D- 85 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 85 (383)
|+++|+|||||||+|+.+.+..++.+ .+|.+++.+... +.+..+.+ +. ..+++ .+.+. .
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~~---g~~~~~~~-------~~--~~~~~----~~~~~~~~ 63 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESLN---GKKLKHMI-------PE--HEGLV----MDILKEPG 63 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGCT---TCCC-----------------CHH----HHHHHSTT
T ss_pred cccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHHc---CccHHHHC-------Cc--hHHHH----HHHHhCcc
Confidence 35899999999999999888877775 567766544432 33322211 11 11112 12221 1
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCC---ChHH--HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNS---HRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~---~~~~--i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.....+++||+.++|+.|++. ++++++||+ +... ....+...++...+++.++++++. .
T Consensus 64 ~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~ 127 (180)
T 3bwv_A 64 FFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------I 127 (180)
T ss_dssp GGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------G
T ss_pred hhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------e
Confidence 234678999999999999985 999999998 4322 233453446777778888888762 1
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
+ ++|++|||+++++. +++| .+++++++.... ..++.+++++.++
T Consensus 128 l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el 171 (180)
T 3bwv_A 128 I----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDV 171 (180)
T ss_dssp B----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred e----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHH
Confidence 1 77999999999985 5689 999998654322 2456778888775
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-17 Score=137.44 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=81.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+++.|+++|++++++||.+...+...+ +.+|+..+|+. .||+|+.++.+++++|++|++|++|||+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 108 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA 108 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 789999999999999999999999888 78888655443 39999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
.+++++|+.+++.+. .+.....++.++.+
T Consensus 109 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 109 KLLKRVGIAGVPASA---PFYIRRLSTIFLEK 137 (164)
T ss_dssp HHHTTSSEEECCTTS---CHHHHTTCSSCCCC
T ss_pred HHHHHCCCeEEcCCh---HHHHHHhCcEEecc
Confidence 999999997765432 22222344555554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-18 Score=157.57 Aligned_cols=121 Identities=13% Similarity=0.148 Sum_probs=96.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHH--HHHHHhh-cCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i--~~~l~~~-~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
..++|++.++++.|+ +|+++ ++||....+. ...+ .. .++..+|+.++++++...+||+|.+|..++++ ++|+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcc
Confidence 457899999999999 89988 9999876543 2222 22 34555678888888888999999999999999 9999
Q ss_pred cEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc-c---cccchhhccccccC
Q 016755 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLR 215 (383)
Q Consensus 167 e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~-~---~~a~~vi~~l~e~~ 215 (383)
+|+||||++ +|+.+|+++|+.+++|.++...... . ..++++++++.++.
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~ 257 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELI 257 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHH
Confidence 999999996 9999999999999999886543222 1 15788899988864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-17 Score=146.54 Aligned_cols=100 Identities=15% Similarity=0.147 Sum_probs=81.8
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+|+.|+++|++++++|+.+...+...+ +.+|+..+|+.+ ||+|+.++.+++++|++|++|++|||+.+|+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 899999999999999999999999888 788986655432 8999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+++++|+.+++... .+.....++.++.+.
T Consensus 154 ~~~~~ag~~~a~~~~---~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 154 PVMAQVGLSVAVADA---HPLLLPKAHYVTRIK 183 (211)
T ss_dssp HHHTTSSEEEECTTS---CTTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEeCCc---cHHHHhhCCEEEeCC
Confidence 999999998765432 222223455555544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-17 Score=149.40 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=68.8
Q ss_pred cEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCcccccc----ccchhhcc
Q 016755 136 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEVINS 210 (383)
Q Consensus 136 ~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~~~~~----~a~~vi~~ 210 (383)
+.++..+....+||+|.++..+++++|++|++|++|||+ .+|+.+|+++|+.+++|.++........ .|++++++
T Consensus 170 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~ 249 (264)
T 3epr_A 170 EAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLAS 249 (264)
T ss_dssp HHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESC
T ss_pred HHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECC
Confidence 444556677789999999999999999999999999999 5999999999999999998765443322 67999999
Q ss_pred ccccCcc
Q 016755 211 LLDLRPE 217 (383)
Q Consensus 211 l~e~~~~ 217 (383)
+.++...
T Consensus 250 l~~l~~~ 256 (264)
T 3epr_A 250 LDEWTFN 256 (264)
T ss_dssp GGGCCSC
T ss_pred HHHHhcc
Confidence 9986543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-16 Score=152.90 Aligned_cols=99 Identities=15% Similarity=0.275 Sum_probs=87.7
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCC---------hHH---HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSH---------RAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~---------~~~---i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++||+.++|+.|+++|++++|+||.+ ..+ +...+ +.+|+. |+.+++++++..+||+|++|..+++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~ 164 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 164 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence 78999999999999999999999965 232 55666 677874 8999999999999999999999999
Q ss_pred HcC----CCCCcEEEEecCh-----------------hhhHHHHhcCCEEEEecC
Q 016755 160 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~-----------------~Di~~a~~aG~~~i~v~~ 193 (383)
++| ++|++|+||||+. .|+.+|+++|+.++....
T Consensus 165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe~ 219 (416)
T 3zvl_A 165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEE 219 (416)
T ss_dssp HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHHH
T ss_pred HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcHH
Confidence 998 9999999999997 899999999999876443
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-17 Score=140.65 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs 174 (383)
...++|+.|+++|++++++|+.+...+...+ +.+|+..+|+ ..||++..++.+++++|++|++|++|||+
T Consensus 39 ~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~---------~~k~k~~~~~~~~~~~~~~~~~~~~vGD~ 108 (180)
T 1k1e_A 39 RDGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFL---------GKLEKETACFDLMKQAGVTAEQTAYIGDD 108 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred chHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeec---------CCCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence 3457899999999999999999999988888 7788865442 25999999999999999999999999999
Q ss_pred hhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 175 VIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 175 ~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+|+.+++.+|+.+++.+. .+.....++.++.+.
T Consensus 109 ~~Di~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 109 SVDLPAFAACGTSFAVADA---PIYVKNAVDHVLSTH 142 (180)
T ss_dssp GGGHHHHHHSSEEEECTTS---CHHHHTTSSEECSSC
T ss_pred HHHHHHHHHcCCeEEeCCc---cHHHHhhCCEEecCC
Confidence 9999999999998775422 222223455666554
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-17 Score=142.95 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=79.6
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+|+.|+++|++++++|+.....++..+ +.+|+. ++.+ .||+|+.++.+++++|+++++|++|||+.+|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-----~~~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~ 115 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-----VLHG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL 115 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-----EEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-----eEeC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 899999999999999999999999888 788884 3333 39999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
.+++.+|+.+++.+. .+.....++.++.+
T Consensus 116 ~~~~~ag~~v~~~~~---~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 116 PCFALVGWPVAVASA---HDVVRGAARAVTTV 144 (176)
T ss_dssp HHHHHSSEEEECTTC---CHHHHHHSSEECSS
T ss_pred HHHHHCCCeEECCCh---hHHHHHhCCEEecC
Confidence 999999987654332 22222344555555
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-16 Score=137.25 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+|+.|+++|++++++|+.+...++..+ +.+|+..+|+.+ +++|+.++.+++++|++|++|++|||+.+|+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 889999999999999999999999888 888987666543 7788999999999999999999999999999
Q ss_pred HHHHhcCCEEEE
Q 016755 179 VAGKAAGMEVVA 190 (383)
Q Consensus 179 ~~a~~aG~~~i~ 190 (383)
.+++.+|+.+++
T Consensus 124 ~~~~~ag~~~~~ 135 (189)
T 3mn1_A 124 PVIRRVGLGMAV 135 (189)
T ss_dssp HHHHHSSEEEEC
T ss_pred HHHHHCCCeEEe
Confidence 999999997654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-16 Score=143.26 Aligned_cols=80 Identities=26% Similarity=0.396 Sum_probs=64.6
Q ss_pred CcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCEEEEecCCCCccccc-c---ccchhhc
Q 016755 135 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRY-T---AADEVIN 209 (383)
Q Consensus 135 f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs-~~Di~~a~~aG~~~i~v~~~~~~~~~~-~---~a~~vi~ 209 (383)
|+.++..+....+||+|.+++.+++++|+++++|++|||+ .||+.+++.+|+.++++.++....... . .|+++++
T Consensus 170 ~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~ 249 (266)
T 3pdw_A 170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID 249 (266)
T ss_dssp HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES
T ss_pred HHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC
Confidence 3444555667789999999999999999999999999999 699999999999999999876543332 2 4899999
Q ss_pred ccccc
Q 016755 210 SLLDL 214 (383)
Q Consensus 210 ~l~e~ 214 (383)
++.++
T Consensus 250 ~~~el 254 (266)
T 3pdw_A 250 SLTEW 254 (266)
T ss_dssp SGGGG
T ss_pred CHHHH
Confidence 99885
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=138.56 Aligned_cols=72 Identities=36% Similarity=0.441 Sum_probs=62.2
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccccc--------ccchhhcccccc
Q 016755 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDL 214 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~--------~a~~vi~~l~e~ 214 (383)
...+||+|.+++.+++++|+++++|++|||++ +|+.+|+.+|+.+++|.++........ .|+++++++.++
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 55789999999999999999999999999995 999999999999999998765443322 578899998875
Q ss_pred C
Q 016755 215 R 215 (383)
Q Consensus 215 ~ 215 (383)
.
T Consensus 263 ~ 263 (268)
T 3qgm_A 263 V 263 (268)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.9e-17 Score=151.23 Aligned_cols=112 Identities=17% Similarity=0.188 Sum_probs=91.5
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
..+++||+.++|+.|+++|++++++||.+...+...+ +.+|+..+|+.++ |+.+..++++++.++++|
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~ 201 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKV 201 (263)
Confidence 4578999999999999999999999999999888888 7889988887765 445678899999999999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhh--ccccccC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLR 215 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi--~~l~e~~ 215 (383)
+||||+.+|+.+++++|+.+.+- .........++.++ +++.++.
T Consensus 202 ~~VGD~~~D~~aa~~Agv~va~g---~~~~~~~~~ad~v~~~~~l~~l~ 247 (263)
T 2yj3_A 202 LMIGDGVNDAAALALADVSVAMG---NGVDISKNVADIILVSNDIGTLL 247 (263)
Confidence 99999999999999999865443 22223334567888 7777753
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-16 Score=146.89 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=87.7
Q ss_pred CCCchHHHHHHHHHHC-CCCEEEEeCC---------------------ChHHHHHHHHhhcCCcccCcEE----------
Q 016755 91 KALPGANRLIKHLSCH-GVPMALASNS---------------------HRATIESKISYQHGWNESFSVI---------- 138 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~-G~~~~i~s~~---------------------~~~~i~~~l~~~~gl~~~f~~i---------- 138 (383)
.+.+++.++++.++++ |+++++.|+. ....+...+ +..|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKIC-EEYGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHH-HHHTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHH-HHcCCCEEEEEccccccCCCCc
Confidence 5678999999999887 9999998876 445555566 667776555443
Q ss_pred EeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 139 ~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
.+.+....+++++..++.+++++|++|++|++|||+.||+.+++.+|+.+++- . ..+.....+++++.+..
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~--~~~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-N--ATQEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-T--CCHHHHHHCCCBCSSCH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-C--ccHHHHHhCCEEcCCCC
Confidence 44555667899999999999999999999999999999999999999765432 2 22222234455555443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-16 Score=136.07 Aligned_cols=83 Identities=14% Similarity=0.259 Sum_probs=73.7
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
.|+.|++.|++++++||.+...+...+ +.+|+..+|+. .||++..++.+++++|++|++|++|||+.||+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 488899999999999999999999888 78888654432 39999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEe
Q 016755 179 VAGKAAGMEVVAV 191 (383)
Q Consensus 179 ~~a~~aG~~~i~v 191 (383)
.+++.+|+.+++.
T Consensus 130 ~~~~~ag~~va~~ 142 (195)
T 3n07_A 130 PVMEKVALRVCVA 142 (195)
T ss_dssp HHHTTSSEEEECT
T ss_pred HHHHHCCCEEEEC
Confidence 9999999987643
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=128.45 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=81.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+|+.|++.|++++++||.+...+...+ +.+|+..+|+ .+||+|+.++.+++++|++|++|++|||+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 789999999999999999999888888 7788754432 269999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+++.+|+.+++... .......++.++.+.
T Consensus 131 ~~a~~ag~~~~~~~~---~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVADA---HPLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTTS---CTTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecCc---CHHHHhcCCEEEeCC
Confidence 999999998865432 122223456666654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-16 Score=135.41 Aligned_cols=82 Identities=16% Similarity=0.236 Sum_probs=73.6
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
.|+.|+++|++++++||.+...+...+ +.+|+..+|+.+ ||+|+.+..+++++|++|++|++|||+.+|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 123 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL 123 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 478899999999999999999999888 788886655432 9999999999999999999999999999999
Q ss_pred HHHHhcCCEEEE
Q 016755 179 VAGKAAGMEVVA 190 (383)
Q Consensus 179 ~~a~~aG~~~i~ 190 (383)
.+++.+|+.+++
T Consensus 124 ~~~~~ag~~~~~ 135 (191)
T 3n1u_A 124 PLIQQVGLGVAV 135 (191)
T ss_dssp HHHHHSSEEEEC
T ss_pred HHHHHCCCEEEe
Confidence 999999998743
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-15 Score=139.43 Aligned_cols=77 Identities=19% Similarity=0.085 Sum_probs=57.3
Q ss_pred cCcEEEeCC----CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 134 SFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 134 ~f~~i~~~~----~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
.+..+.++. -...+.+++.+++.+++++|+++++|++|||+.||++|++.+|+.++ .++..+.....|+.++.
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va---m~na~~~~k~~A~~v~~ 254 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVA---MGNAQEPVKKAADYITL 254 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE---CTTSCHHHHHHCSEECC
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEE---cCCCcHHHHHhCCEEcC
Confidence 345555543 23467788999999999999999999999999999999999997444 34444444445677776
Q ss_pred cccc
Q 016755 210 SLLD 213 (383)
Q Consensus 210 ~l~e 213 (383)
+..+
T Consensus 255 ~~~e 258 (279)
T 4dw8_A 255 TNDE 258 (279)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 6554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-15 Score=133.58 Aligned_cols=191 Identities=15% Similarity=0.065 Sum_probs=112.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHc---CCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHH-HHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE-VYSMF 83 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 83 (383)
|+|+|+|||||||+++...+.....++++++ |..+.. ..|++... ...++..++.+...-..... +.. -
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i-----~TGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~-~ 74 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIML-----VTGNTVQF-AEAASILIGTSGPVVAEDGGAISY-K 74 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEE-----ECSSCHHH-HHHHHHHHTCCSCEEEGGGTEEEE-T
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEE-----EcCCChhH-HHHHHHHcCCCCeEEEeCCcEEEe-C
Confidence 4899999999999998554444444444433 544321 22333322 23344444543210000000 000 0
Q ss_pred HhhhccCCCCchHHHHHHHHH-HC-CCCE-----------EEEe-CCChHHHHHHHHhhcCCcccCcEEEeCC----CCC
Q 016755 84 SDHLCKVKALPGANRLIKHLS-CH-GVPM-----------ALAS-NSHRATIESKISYQHGWNESFSVIVGSD----EVR 145 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~-~~-G~~~-----------~i~s-~~~~~~i~~~l~~~~gl~~~f~~i~~~~----~~~ 145 (383)
.+......+ +.+.++++.++ +. |+.+ .+++ +...+.+...+ +.++ ..|+.+ ++. ...
T Consensus 75 ~~~~~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~ 149 (231)
T 1wr8_A 75 KKRIFLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKK 149 (231)
T ss_dssp TEEEESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEEC
T ss_pred CEEEEeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEec
Confidence 000111122 77778887777 55 5543 5555 44566666666 4443 455655 442 234
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.++|++..++.+++++|+++++|++|||+.||+.+++.+|+.+ .+.+. .+.....++.++.+..+
T Consensus 150 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~~~--~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 150 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVAQA--PKILKENADYVTKKEYG 214 (231)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECTTS--CHHHHTTCSEECSSCHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EecCC--CHHHHhhCCEEecCCCc
Confidence 6899999999999999999999999999999999999999984 44432 22222345666665543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=124.63 Aligned_cols=142 Identities=18% Similarity=0.247 Sum_probs=98.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
.++++|+|||||||+|+.+.+...+.. +..+ .....++. ..
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~-----~~~~--------------------------~~~~~~~~-------~~- 97 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKT-----GKGY--------------------------PYKWDDWI-------NK- 97 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHH-----SCCT--------------------------TTTHHHHH-------HH-
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhc-----ccch--------------------------HHHHHHHH-------Hc-
Confidence 468999999999999997655433321 1111 00011111 11
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCc--ccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~---~~~i~~~l~~~~gl~--~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
....++||+.++|+.|+++|++++++||.+ ...+...| +.+|+. .+|+.++++++. .||.+ ...++ ..
T Consensus 98 -~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~ 170 (258)
T 2i33_A 98 -AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQ 170 (258)
T ss_dssp -CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HH
T ss_pred -CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-Hh
Confidence 246789999999999999999999999998 44556666 677888 677888877653 34443 33333 23
Q ss_pred CCCCCcEEEEecChhhhHHHH-------h---------cCCEEEEecCCCC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGK-------A---------AGMEVVAVPSLPK 196 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~-------~---------aG~~~i~v~~~~~ 196 (383)
+ ...|++|||+.+|+.+|. + +|++++.++++..
T Consensus 171 ~--~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y 219 (258)
T 2i33_A 171 T--HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY 219 (258)
T ss_dssp H--EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred C--CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence 3 234999999999999983 4 8999999988644
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-15 Score=136.48 Aligned_cols=66 Identities=17% Similarity=0.037 Sum_probs=51.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
..+.+++.+++.+++++|+++++|++|||+.||++|++.+|+.+++ ++..+.....|+++..+..+
T Consensus 198 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 198 PKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM---GNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCTTT
T ss_pred ECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe---cCCcHHHHHhcCEECCCCCc
Confidence 4678899999999999999999999999999999999999986554 33333334455666665544
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=124.32 Aligned_cols=97 Identities=8% Similarity=0.038 Sum_probs=66.8
Q ss_pred EEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHh
Q 016755 110 MALASNSHRATIESKISYQHGWNESFSVIVGSD------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183 (383)
Q Consensus 110 ~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~------~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~ 183 (383)
..+++ .....+.... +.++. .|..+.++. ....+++++.+++.+++++|+++++|++|||+.||++|++.
T Consensus 159 ki~~~-~~~~~~~~~~-~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ 234 (274)
T 3fzq_A 159 KICLW-SNEKVFDEVK-DILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQA 234 (274)
T ss_dssp EEEEE-CCHHHHHHHH-HHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHT
T ss_pred EEEEE-cCHHHHHHHH-HHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHh
Confidence 33344 4445455444 33332 245555444 34578899999999999999999999999999999999999
Q ss_pred cCCEEEEecCCCCccccccccchhhccccc
Q 016755 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 184 aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
+|+.+++ ++..+.....|++++.+..+
T Consensus 235 ag~~vam---~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 235 SDVTIAM---KNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp CSEEEEE---TTSCHHHHHHCSEEECCGGG
T ss_pred cCceEEe---cCccHHHHHhhhheeCCCch
Confidence 9975554 33334444456777776654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=4e-14 Score=129.77 Aligned_cols=65 Identities=15% Similarity=0.091 Sum_probs=45.1
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.+..++.+++.+++++|+++++|++|||+.||++|++.+|+. +..++..+.....|+++..+..+
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG---VAMGNAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE---CBC---CCHHHHHCSCBC-----
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce---eeccCCCHHHHHhcceeccCCCc
Confidence 455689999999999999999999999999999999999974 44444444444556777666544
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-15 Score=137.16 Aligned_cols=118 Identities=12% Similarity=0.067 Sum_probs=79.6
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCCh------HHHH-HHHHhhcCC-------------cccCcEEEeCCC--------
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHR------ATIE-SKISYQHGW-------------NESFSVIVGSDE-------- 143 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~------~~i~-~~l~~~~gl-------------~~~f~~i~~~~~-------- 143 (383)
..+++.++++.+++.|+++.+.+.... ..+. ..+ ...++ ...++.++.+++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 164 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFY-DFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLP 164 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTT-TTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHH-HhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHH
Confidence 346788888888888888877765432 2222 222 22221 234444443321
Q ss_pred -----------------CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccch
Q 016755 144 -----------------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE 206 (383)
Q Consensus 144 -----------------~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~ 206 (383)
...++|++.+++.+++++|+++++|++|||+.||+.|++.+|+.+++ ++..+.....++.
T Consensus 165 ~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~ 241 (261)
T 2rbk_A 165 SIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADY 241 (261)
T ss_dssp GSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSE
T ss_pred hcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCE
Confidence 45788999999999999999999999999999999999999996654 2222222345566
Q ss_pred hhccccc
Q 016755 207 VINSLLD 213 (383)
Q Consensus 207 vi~~l~e 213 (383)
++.+..+
T Consensus 242 v~~~~~~ 248 (261)
T 2rbk_A 242 VTAPIDE 248 (261)
T ss_dssp ECCCGGG
T ss_pred EeccCch
Confidence 6666654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=116.02 Aligned_cols=79 Identities=16% Similarity=0.064 Sum_probs=66.7
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHh--hcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~--~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~ 176 (383)
.|+.|+++|++++++|+. ..+...+ + .+++ + ++.+ .++++..++.+++++|++|++|++|||+.|
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l-~~l~lgi----~-~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTL-SALKLDC----K-TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHH-HTTCCCC----C-EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHH-HHhCCCc----E-EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence 588999999999999998 5667677 6 4555 3 3332 368899999999999999999999999999
Q ss_pred hhHHHHhcCCEEEE
Q 016755 177 GVVAGKAAGMEVVA 190 (383)
Q Consensus 177 Di~~a~~aG~~~i~ 190 (383)
|+.+++.+|+.+++
T Consensus 111 Di~~~~~ag~~~a~ 124 (168)
T 3ewi_A 111 DEECLKRVGLSAVP 124 (168)
T ss_dssp GHHHHHHSSEEEEC
T ss_pred HHHHHHHCCCEEEe
Confidence 99999999998654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6.6e-14 Score=126.93 Aligned_cols=195 Identities=12% Similarity=0.116 Sum_probs=107.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH---cCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK---YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~---~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
++|+|+|||||||+|+...+.....+++++ .|..+.. ..|++.... ..++..++.+.-. .....+.....
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~-----aTGR~~~~~-~~~~~~l~~~~~i-~~nGa~i~~~~ 74 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAI-----ATGRAPFMF-EHVRKQLGIDSFV-SFNGQYVVFEG 74 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEE-----ECSSCGGGS-HHHHHHHTCCCEE-EGGGTEEEETT
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEE-----ECCCChHHH-HHHHHhcCCCEEE-ECCCCEEEECC
Confidence 478999999999999865554444444443 3553221 223322211 1223333332100 00000000000
Q ss_pred hh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCCh-------HHHHHHHHhhcC-----C-------cccCcEEEeCC--
Q 016755 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHR-------ATIESKISYQHG-----W-------NESFSVIVGSD-- 142 (383)
Q Consensus 85 ~~-~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~-------~~i~~~l~~~~g-----l-------~~~f~~i~~~~-- 142 (383)
+. .....+.+.+.++++.+++.|+.+.+.++... ......+ ...+ + ...++.++.++
T Consensus 75 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 153 (258)
T 2pq0_A 75 NVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSM-ASLKFAHPPVDPLYYENKDIYQALLFCRAE 153 (258)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHH-HHTTCCCCCBCTTGGGGSCCCEEEECSCHH
T ss_pred EEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHH-HhhcCCccccccchhhccCceEEEEECCHH
Confidence 00 11223446778888888888888777755430 1111122 1111 1 12233333322
Q ss_pred -----------------------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc
Q 016755 143 -----------------------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH 199 (383)
Q Consensus 143 -----------------------~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~ 199 (383)
-...+-.|..+++.+++++|+++++|++|||+.||++|++.+|+.+++ ++..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~ 230 (258)
T 2pq0_A 154 EEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEE 230 (258)
T ss_dssp HHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHH
T ss_pred HHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHH
Confidence 112345578889999999999999999999999999999999997765 233333
Q ss_pred cccccchhhccccc
Q 016755 200 RYTAADEVINSLLD 213 (383)
Q Consensus 200 ~~~~a~~vi~~l~e 213 (383)
....++++..+..+
T Consensus 231 ~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 231 VKRVADFVTKPVDK 244 (258)
T ss_dssp HHHTCSEEECCGGG
T ss_pred HHHhCCEEeCCCCc
Confidence 34456777766554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.38 E-value=7.3e-13 Score=121.87 Aligned_cols=104 Identities=9% Similarity=0.065 Sum_probs=66.8
Q ss_pred HCCCCEEEEe-CCChHHHHHHHHhhcCCcccCcEEEeCCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 016755 105 CHGVPMALAS-NSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (383)
Q Consensus 105 ~~G~~~~i~s-~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~ 179 (383)
+..+++.++. ..........+.+.++ ..+..+.++.. ...+.+++.+++.+++++|++++++++|||+.||++
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ 241 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIE 241 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 4556777763 2221111112213332 22345555542 345677899999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 180 ~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
|++.+|+.+++ ++..+.....|+++..+..+
T Consensus 242 ml~~ag~~vam---~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 242 MLQNAGISYAV---SNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp HHHHSSEEEEE---TTSCHHHHHHSSEEECCGGG
T ss_pred HHHhCCCEEEc---CCCCHHHHHhcCeECCCCCC
Confidence 99999976554 23333334456677666544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=119.43 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=85.7
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhh--------cCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~--------~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
.++||+.++|+.|+++|++++++||.+... +...+ +. +|+ +|+.++++++. ..||+|+.+..+++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW 263 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence 468999999999999999999999998543 34445 44 788 48888887765 46999999999999
Q ss_pred HcCCCCCc-EEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 160 ~lg~~p~e-~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++.++.+ |++|||+.+|+.+|+++|+.++.|.++
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99888755 799999999999999999999999886
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.4e-13 Score=125.47 Aligned_cols=76 Identities=13% Similarity=-0.006 Sum_probs=56.5
Q ss_pred CcEEEeCCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 135 FSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 135 f~~i~~~~~----~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
+..+.++.. ...+.+++.+++.+++++|+++++|++|||+.||++|++.+|+.+++ ++..+.....|+.++.+
T Consensus 210 ~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~ 286 (304)
T 3l7y_A 210 LVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM---ANAPKNVKAAANYQAKS 286 (304)
T ss_dssp EEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC---TTSCHHHHHHCSEECCC
T ss_pred EEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc---CCcCHHHHHhccEEcCC
Confidence 455554432 23567789999999999999999999999999999999999975443 34444444456777766
Q ss_pred ccc
Q 016755 211 LLD 213 (383)
Q Consensus 211 l~e 213 (383)
..+
T Consensus 287 ~~e 289 (304)
T 3l7y_A 287 NDE 289 (304)
T ss_dssp GGG
T ss_pred CCc
Confidence 544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-13 Score=123.16 Aligned_cols=103 Identities=13% Similarity=0.018 Sum_probs=69.5
Q ss_pred HCCCCEEEEeCCChHHHHHHHHhhcC--CcccCcEEEeCC----CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 105 CHGVPMALASNSHRATIESKISYQHG--WNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 105 ~~G~~~~i~s~~~~~~i~~~l~~~~g--l~~~f~~i~~~~----~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
+.++++.++++... ....+ +.++ +...|+.+.++. ....+++++.+++.+++++|+++++|++|||+.||+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~-~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVI-DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHH-HHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHH-HHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 34566777765432 33333 2222 344566666663 345789999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.|++.+|+.++ +.. ..+.....+++++.+..+
T Consensus 221 ~m~~~ag~~va-~~n--a~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 221 EMLKMARYSFA-MGN--AAENIKQIARYATDDNNH 252 (271)
T ss_dssp HHHHHCSEEEE-CTT--CCHHHHHHCSEECCCGGG
T ss_pred HHHHHcCCeEE-eCC--ccHHHHHhCCeeCcCCCC
Confidence 99999999654 333 222223345666655543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-12 Score=118.03 Aligned_cols=66 Identities=18% Similarity=0.090 Sum_probs=51.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
..+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++ ++..+.....|+++..+..+
T Consensus 190 ~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 190 VAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM---GNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHTCSEECCCTTT
T ss_pred eCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHHHHHhcCEeeCCCCc
Confidence 4567889999999999999999999999999999999999986443 33334444456777666544
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-12 Score=117.37 Aligned_cols=65 Identities=18% Similarity=0.072 Sum_probs=48.8
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccch--hhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE--VINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~--vi~~l~ 212 (383)
..+.+++.+++.+++++|++++++++|||+.||++|++.+|+.+ ..++..+.....++. ++.+..
T Consensus 205 ~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~v---Am~Na~~~vk~~A~~~~v~~sn~ 271 (285)
T 3pgv_A 205 AGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGC---IMANAHQRLKDLHPELEVIGSNA 271 (285)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEE---ECTTSCHHHHHHCTTSEECCCGG
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEE---EccCCCHHHHHhCCCCEecccCC
Confidence 35677899999999999999999999999999999999999744 343433443334442 444443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-11 Score=110.47 Aligned_cols=63 Identities=14% Similarity=0.017 Sum_probs=47.9
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+.+++..++.+++++|++++++++|||+.||+.|++.+|+.++ +.. ..+.....++.++.+.
T Consensus 150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va-~~n--~~~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-PAN--ATDNIKAVSDFVSDYS 212 (227)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-CTT--SCHHHHHHCSEECSCC
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE-ecC--chHHHHHhCCEEecCC
Confidence 45778999999999999999999999999999999999999643 333 2222223455555544
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-13 Score=130.03 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=56.3
Q ss_pred CCCCCCChHHHHHHHHHc----------------------CC-----CCCcEEEEecCh-hhhHHHHhcCCEEEEecCCC
Q 016755 144 VRTGKPSPDIFLEAAKRL----------------------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 144 ~~~~kp~p~~~~~~~~~l----------------------g~-----~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~ 195 (383)
...|||.+.+|..+++.+ |+ ++++++||||++ +|+.+|+++|+.+++|.++.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 348999999999987654 22 679999999999 69999999999999999865
Q ss_pred Cccc---cccccchhhcccccc
Q 016755 196 KQTH---RYTAADEVINSLLDL 214 (383)
Q Consensus 196 ~~~~---~~~~a~~vi~~l~e~ 214 (383)
.... ....|+.+++++.++
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el 343 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDA 343 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHH
T ss_pred CCcccccccCCCCEEECCHHHH
Confidence 4322 134678888888874
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-11 Score=112.88 Aligned_cols=64 Identities=22% Similarity=0.161 Sum_probs=47.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
+-.+..+++.+++++|+++++|++|||+.||+.|++.+|+.+ .+.+. .+.....++.++.+..+
T Consensus 214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~~~--~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGNA--REDIKSIADAVTLTNDE 277 (288)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTTC--CHHHHHHCSEECCCGGG
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEE-EEcCC--CHHHHhhCceeecCCCc
Confidence 445788899999999999999999999999999999999944 45432 22222345666655543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-12 Score=120.32 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-CC-------------------CCCCC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV-------------------RTGKP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~~-------------------~~~kp 149 (383)
..+.+++.++++.|++ |+++.++|+....++.... ..+++. +.+.+.. +. ...++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTA-SMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH-HHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccc-hhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 4678999999999999 9999999988766666555 445552 3332210 00 00011
Q ss_pred C---------------hHHHH----------HHHHHcCCCCCc----EEEEecChhhhHHHHhc----CCEEEEecCCCC
Q 016755 150 S---------------PDIFL----------EAAKRLNMEPSS----SLVIEDSVIGVVAGKAA----GMEVVAVPSLPK 196 (383)
Q Consensus 150 ~---------------p~~~~----------~~~~~lg~~p~e----~l~VGDs~~Di~~a~~a----G~~~i~v~~~~~ 196 (383)
. |..+. +.....|+++++ |++|||+.||++|++.+ |+.+++ +.
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na--- 252 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG--- 252 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC---
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC---
Confidence 1 12222 111112678888 99999999999999999 998765 32
Q ss_pred ccccccccchhhccc
Q 016755 197 QTHRYTAADEVINSL 211 (383)
Q Consensus 197 ~~~~~~~a~~vi~~l 211 (383)
.+.....|+.++.+.
T Consensus 253 ~~~lk~~Ad~v~~~~ 267 (332)
T 1y8a_A 253 NEYALKHADVVIISP 267 (332)
T ss_dssp CHHHHTTCSEEEECS
T ss_pred CHHHHhhCcEEecCC
Confidence 222233456666543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.08 E-value=9.2e-10 Score=98.93 Aligned_cols=99 Identities=15% Similarity=0.218 Sum_probs=72.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh----HHHHHHHHhhcCCcccCc-EEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~----~~i~~~l~~~~gl~~~f~-~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
...++||+.++|+.|++.|++++++|+.+. ..+...| +.+|+..+++ .++...+ ...+...+..+.+. |.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy 173 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKD---KSAKAARFAEIEKQ-GY 173 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESS---CSCCHHHHHHHHHT-TE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCC---CCChHHHHHHHHhc-CC
Confidence 568999999999999999999999999865 4677777 7789987663 5554433 23345555555444 43
Q ss_pred CCCcEEEEecChhhhHHH--------H---------hcCCEEEEecCC
Q 016755 164 EPSSSLVIEDSVIGVVAG--------K---------AAGMEVVAVPSL 194 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a--------~---------~aG~~~i~v~~~ 194 (383)
..+++|||..+|+.++ + ..|.+.+++++.
T Consensus 174 --~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp 219 (262)
T 3ocu_A 174 --EIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNA 219 (262)
T ss_dssp --EEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCS
T ss_pred --CEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 3499999999999983 2 357778888774
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-09 Score=98.41 Aligned_cols=99 Identities=15% Similarity=0.275 Sum_probs=73.2
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChH----HHHHHHHhhcCCcccCc-EEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA----TIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~----~i~~~l~~~~gl~~~f~-~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
..+++||+.++|+.|++.|++++++|+.+.. .+...| +.+|+..+++ .++...+ ++........+...|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~gy 173 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMGY 173 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcCC
Confidence 5689999999999999999999999998654 677778 7789987664 4554332 2333455555555454
Q ss_pred CCCcEEEEecChhhhHH--------HH---------hcCCEEEEecCC
Q 016755 164 EPSSSLVIEDSVIGVVA--------GK---------AAGMEVVAVPSL 194 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~--------a~---------~aG~~~i~v~~~ 194 (383)
.-+++|||+.+|+.+ ++ ..|.+.+++++.
T Consensus 174 --~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp 219 (260)
T 3pct_A 174 --DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT 219 (260)
T ss_dssp --EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred --CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 449999999999998 22 367778888774
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=6.9e-09 Score=101.38 Aligned_cols=100 Identities=20% Similarity=0.189 Sum_probs=82.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC-------------CcccCcEEEeCCCCCCCCCChHH---
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSPDI--- 153 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~g-------------l~~~f~~i~~~~~~~~~kp~p~~--- 153 (383)
+...|.+..+|..|++.| ++.++||++..++...+...+| |.++||.|++... ||..-.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~----KP~FF~~~~ 319 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR----KPLFFGEGT 319 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC----TTGGGTTCC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC----CCCcccCCC
Confidence 566789999999999999 9999999999999988833335 6689999776532 322111
Q ss_pred -------------------------------HHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEecCC
Q 016755 154 -------------------------------FLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL 194 (383)
Q Consensus 154 -------------------------------~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~~~ 194 (383)
+..+++.+|+.+++++||||+. .||..++ .+|++++.|-+.
T Consensus 320 pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 320 VLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp CEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred cceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 5888999999999999999999 8999997 899999998874
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.5e-11 Score=111.53 Aligned_cols=65 Identities=22% Similarity=0.135 Sum_probs=48.7
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+-+++.+++.+++++|++++++++|||+.||+.|++.+|+.+ .+.. ..+.....++.++.+..
T Consensus 194 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~n--~~~~~~~~a~~v~~~~~ 258 (282)
T 1rkq_A 194 DKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV-AVDN--AIPSVKEVANFVTKSNL 258 (282)
T ss_dssp ETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT--SCHHHHHHCSEECCCTT
T ss_pred CCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEE-EecC--CcHHHHhhCCEEecCCC
Confidence 35667899999999999999999999999999999999999843 3333 22222234556655543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=1e-10 Score=101.30 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=87.9
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
+.+.||+.++|+.+++. ++++|+|++...+++..+ +.++...+|+.+++++++..+| +.+.+.++++|.++++|+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~v 141 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVI 141 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEE
Confidence 56789999999999998 999999999999999998 8889999999999998887665 557788899999999999
Q ss_pred EEecChhhhHHHHhcCCEEEEec
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
+|||++.++.++.++|+.+..+.
T Consensus 142 ivDDs~~~~~~~~~ngi~i~~~~ 164 (195)
T 2hhl_A 142 IVDNSPASYIFHPENAVPVQSWF 164 (195)
T ss_dssp EEESCGGGGTTCGGGEEECCCCS
T ss_pred EEECCHHHhhhCccCccEEeeec
Confidence 99999999999999999765443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.3e-10 Score=105.91 Aligned_cols=65 Identities=15% Similarity=0.053 Sum_probs=49.2
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
..+.+++.+++.+++++|+++++|++|||+.||+.|++.+|+.+++ ++..+.....++.++.+..
T Consensus 186 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~ 250 (268)
T 1nf2_A 186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNN 250 (268)
T ss_dssp CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTT
T ss_pred CCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe---cCCCHHHHhhCCEEEccCC
Confidence 3567889999999999999999999999999999999999995543 2222222233556665543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.1e-11 Score=109.44 Aligned_cols=44 Identities=9% Similarity=-0.065 Sum_probs=40.6
Q ss_pred CCChHHHHHHHHHcCCCC--CcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 148 KPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p--~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
++|+.+++.+++++|+++ ++|++|||+.||+.|++.+|+.+++-
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~ 220 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG 220 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC
Confidence 788999999999999999 99999999999999999999875543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.6e-10 Score=104.13 Aligned_cols=61 Identities=15% Similarity=0.071 Sum_probs=47.1
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~ 209 (383)
.+-+++.+++.+++.+|+++++|++|||+.||+.|++.+|+.++ +.+ ..+.....++.++.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n--a~~~~k~~a~~v~~ 281 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VAN--ATDSAKSHAKCVLP 281 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTT--CCHHHHHHSSEECS
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcC--CcHHHHhhCCEEEc
Confidence 56678999999999999999999999999999999999999643 433 22222234455555
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.79 E-value=6.1e-10 Score=95.32 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=85.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
...+.||+.++|+.+++. ++++|+|++...+++..+ +.++...+|+.+++.+++...| +.+.+.++++|.++++|
T Consensus 53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~ 127 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceE
Confidence 356899999999999998 999999999999999998 8889988999999988876544 45677889999999999
Q ss_pred EEEecChhhhHHHHhcCCEE
Q 016755 169 LVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~ 188 (383)
++|||++.++.++.++|+.+
T Consensus 128 vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 128 LILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECSCGGGGTTCTTSBCCC
T ss_pred EEEeCCHHHhccCcCCEeEe
Confidence 99999999999999999974
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-07 Score=88.69 Aligned_cols=93 Identities=15% Similarity=0.070 Sum_probs=64.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cCcEEEeCC-----C------------CCCCCCCh
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIVGSD-----E------------VRTGKPSP 151 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~--~f~~i~~~~-----~------------~~~~kp~p 151 (383)
+++|++.++++.|+++|++++|+|++...+++.+. +.+|+.. .-+.|++.. + +..+..++
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia-~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFA-TDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 47999999999999999999999999999999887 6665421 113333221 0 11222344
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcC
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG 185 (383)
..++..++. ......++++|||.+|+.|.+..+
T Consensus 300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 300 QTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 555544332 244567999999999999999743
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.57 E-value=6.6e-07 Score=82.48 Aligned_cols=95 Identities=18% Similarity=0.121 Sum_probs=65.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-----C-----------CCCCCCChH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-----E-----------VRTGKPSPD 152 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-----~-----------~~~~kp~p~ 152 (383)
..++.||+.++++.|++.|+++.++|++....++..+ +.+|+......+++.. + ..+.|+.|.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~-~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHH-HHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH-HHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 4789999999999999999999999999999988888 7777654322333221 0 012222222
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
.-......+.-...+++++||+.||+.|++.+
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 21222234444667899999999999997744
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.6e-07 Score=79.26 Aligned_cols=45 Identities=22% Similarity=0.163 Sum_probs=40.9
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
..+-+++.+++.+++++|++++++++|||+.||+.|++.+|+.++
T Consensus 158 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va 202 (244)
T 1s2o_A 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVI 202 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEE
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEE
Confidence 356788999999999999999999999999999999999998543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-05 Score=77.62 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=79.9
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCcccCcEEEeCCCCC----------------
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEVR---------------- 145 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--------gl~~~f~~i~~~~~~~---------------- 145 (383)
+...|.+..+|+.|++.|.++.++||++-.++...+.-.+ .|.++||.||+...-+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 4456889999999999999999999999999887773333 5889999999764210
Q ss_pred --------CCCC---ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEecCC
Q 016755 146 --------TGKP---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL 194 (383)
Q Consensus 146 --------~~kp---~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~~~ 194 (383)
.-+| ...-.....+.+|+...+++||||+. .||..++ ..|++|+.|-+.
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 0011 12335666778899999999999999 7977765 569999888663
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-05 Score=73.59 Aligned_cols=49 Identities=14% Similarity=0.251 Sum_probs=39.7
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh----cCCcccCcEEEeC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGS 141 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~----~gl~~~f~~i~~~ 141 (383)
..++|++.++++.|+++|+.++|+|.++..+++.+. .. .|+.. +.|+++
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a-~~~~~~ygIp~--e~ViG~ 194 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVA-ADPRYGYNAKP--ENVIGV 194 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-TCGGGSCCCCG--GGEEEE
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hhcccccCCCH--HHeEee
Confidence 368999999999999999999999999999998777 43 45543 455553
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.2e-07 Score=79.43 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=75.5
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~-~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
+...||+.++|+.+. +++.++|.|.+...+++.++ +.++.. .+|+..+..+.+.... ..+.+.++.+|.++++|
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~v 132 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKV 132 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGE
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHE
Confidence 567899999999998 66999999999999999999 778876 4788887776654321 22455678889999999
Q ss_pred EEEecChhhhHHHHhcCCEEE
Q 016755 169 LVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i 189 (383)
++|+|++.-+.+....|+.+.
T Consensus 133 IiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 133 IIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp EEEESCTTTTTTCGGGEEECC
T ss_pred EEEECCHHHHhhCccCceEee
Confidence 999999988876666666443
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-06 Score=83.35 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=69.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCc-EEEeCCCCCCCCCChHHHHHHHHHc-CCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~-~i~~~~~~~~~kp~p~~~~~~~~~l-g~~p 165 (383)
.+.+.||+.++|+.+. ++|.++|.|.+...++..++ +.++... +|+ .+++.++.+. .+.+.++++ |.++
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl 144 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDT 144 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCC
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCC
Confidence 4678899999999999 66999999999999999988 7788776 777 5666665432 122335555 8999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++|++|+|++.-...- . ..+.|.+
T Consensus 145 ~~viiiDd~~~~~~~~---p-N~I~i~~ 168 (372)
T 3ef0_A 145 SMVVVIDDRGDVWDWN---P-NLIKVVP 168 (372)
T ss_dssp TTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred ceEEEEeCCHHHcCCC---C-cEeeeCC
Confidence 9999999999544332 2 4455544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.00 E-value=8.3e-06 Score=83.14 Aligned_cols=103 Identities=12% Similarity=0.142 Sum_probs=73.9
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|+++.++|+.+........ +.+|+. .+++.- .+..+ ..+++++... ++++
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~----~~~~~~---~P~~K----~~~v~~l~~~-~~v~ 522 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAEV---LPHQK----SEEVKKLQAK-EVVA 522 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECSC---CTTCH----HHHHHHHTTT-CCEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC----EEEEeC---CHHhH----HHHHHHHhhC-CeEE
Confidence 457899999999999999999999999998888777 778884 333221 12233 3344444444 8999
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCccccccccchhh
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi 208 (383)
||||+.||+.|.+.+|+.+.+- +..+.....++.++
T Consensus 523 ~vGDg~ND~~al~~A~vgiamg---~g~~~a~~~AD~vl 558 (645)
T 3j08_A 523 FVGDGINDAPALAQADLGIAVG---SGSDVAVESGDIVL 558 (645)
T ss_dssp EEECSSSCHHHHHHSSEEEEEC---CCSCCSSCCSSSEE
T ss_pred EEeCCHhHHHHHHhCCEEEEeC---CCcHHHHHhCCEEE
Confidence 9999999999999999755443 22233334556665
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0001 Score=76.19 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|+++.++|+.+........ +.+|+. .+++.- .+..+ ..+++++... ++++
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~----~~~~~~---~P~~K----~~~v~~l~~~-~~v~ 600 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAEV---LPHQK----SEEVKKLQAK-EVVA 600 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECSC---CTTCH----HHHHHHHTTT-CCEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCc----EEEccC---CHHHH----HHHHHHHhcC-CeEE
Confidence 467899999999999999999999999988888777 778874 333321 11223 3344444444 8999
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCccccccccchhh
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi 208 (383)
||||+.||+.|.+.+|+.+ ..++..+.....+|.++
T Consensus 601 ~vGDg~ND~~al~~A~vgi---amg~g~~~a~~~AD~vl 636 (723)
T 3j09_A 601 FVGDGINDAPALAQADLGI---AVGSGSDVAVESGDIVL 636 (723)
T ss_dssp EEECSSTTHHHHHHSSEEE---ECCCCSCCSSCCSSEEC
T ss_pred EEECChhhHHHHhhCCEEE---EeCCCcHHHHHhCCEEE
Confidence 9999999999999999744 33333333344556665
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=3.3e-05 Score=79.68 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=76.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
-++.|++.+.++.|++.|+++.++|+.......... +.+|+.. +++. -.|+-...+++.+.-..+.++
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia-~~lgi~~----v~a~-------~~P~~K~~~v~~l~~~g~~V~ 620 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA-GTLGIKK----VVAE-------IMPEDKSRIVSELKDKGLIVA 620 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HHHTCCC----EECS-------CCHHHHHHHHHHHHHHSCCEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCE----EEEe-------cCHHHHHHHHHHHHhcCCEEE
Confidence 457899999999999999999999999988888777 7788843 3321 234555556666655678899
Q ss_pred EEecChhhhHHHHhcCCEEEEecCCCCccccccccchhh
Q 016755 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi 208 (383)
||||+.||+.|.+.+++.+.+- +..+.....++.++
T Consensus 621 ~vGDG~ND~paL~~AdvGIAmg---~g~d~a~~~AD~vl 656 (736)
T 3rfu_A 621 MAGDGVNDAPALAKADIGIAMG---TGTDVAIESAGVTL 656 (736)
T ss_dssp EEECSSTTHHHHHHSSEEEEES---SSCSHHHHHCSEEE
T ss_pred EEECChHhHHHHHhCCEEEEeC---CccHHHHHhCCEEE
Confidence 9999999999999999865543 22223333445554
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=78.70 Aligned_cols=100 Identities=12% Similarity=0.010 Sum_probs=71.2
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----cEEEeCCCCCCC----------------CC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEVRTG----------------KP 149 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f----~~i~~~~~~~~~----------------kp 149 (383)
-++.|++.+.++.|++.|+++.++|+.......... +.+|+.... +.++.+.++..- .-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia-~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 457899999999999999999999999988877766 778885432 224444322111 11
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.|+-...+++.+.-..+.++|+||+.||+.|.++|++.+.+
T Consensus 681 ~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 12333444444444458899999999999999999997765
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0002 Score=57.96 Aligned_cols=39 Identities=18% Similarity=0.034 Sum_probs=29.4
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGW 131 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~~~gl 131 (383)
+.|++.++|+.|+++|+.++++|+.+... +...+ +..|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l-~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH-HHcCC
Confidence 45688999999999999999999987433 33444 45555
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00013 Score=57.95 Aligned_cols=29 Identities=3% Similarity=0.047 Sum_probs=24.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRA 119 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~ 119 (383)
.+.|++.+.++.++++|++++++|+.+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 45677889999999999999999998753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0003 Score=62.75 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 016755 95 GANRLIKHLSCHGVPMALASNSHRATIESKI 125 (383)
Q Consensus 95 g~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l 125 (383)
...++|++|+++|++++++|+.+...+...+
T Consensus 25 ~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l 55 (246)
T 3f9r_A 25 EMRALIKRARGAGFCVGTVGGSDFAKQVEQL 55 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence 3455688999999999999999987655444
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00027 Score=64.04 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=27.9
Q ss_pred HHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 97 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 97 ~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
.+.|++|+++|++++++|+.+...+...+ +.+++.
T Consensus 32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 66 (275)
T 1xvi_A 32 APWLTRLREANVPVILCSSKTSAEMLYLQ-KTLGLQ 66 (275)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHTTCT
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 56678888889999999999888887777 666664
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00081 Score=72.12 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc------------------------CcEEEeCCCC--
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV-- 144 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~------------------------f~~i~~~~~~-- 144 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+... +..++.+.+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 46789999999999999999999999888777666 66776521 0123332211
Q ss_pred ----------------CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 145 ----------------~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-+..-.|+-...+.+.+.-..+.++++||+.||+.|.+.|++.+.+
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm 739 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 739 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe
Confidence 1223344444444443332347799999999999999999997765
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00016 Score=64.58 Aligned_cols=65 Identities=8% Similarity=-0.117 Sum_probs=49.2
Q ss_pred CCCChHHHHHHHHHcCC-CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 147 GKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~-~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
+..|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.+++ ..... +.....|+.++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~-~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKH-KKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCC-TTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCc-cccchhceEEeccccc
Confidence 56778999999999998 999999999999999999999996543 33221 2222346777766543
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.07 E-value=6.3e-05 Score=69.62 Aligned_cols=95 Identities=12% Similarity=0.122 Sum_probs=64.9
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc--CcEEEeCCCCC-C---CCCChHHHHHHHHHc---
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--FSVIVGSDEVR-T---GKPSPDIFLEAAKRL--- 161 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~--f~~i~~~~~~~-~---~kp~p~~~~~~~~~l--- 161 (383)
...||+.++|+.+.+. |.++|.|.+...++..++ +.++.... +...+..+.+. + .+..+..+.+-+..+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~ 241 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL 241 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence 3679999999999965 999999999999999998 77765543 23222222111 0 111111233345556
Q ss_pred --CCCCCcEEEEecChhhhHHHHhcCCE
Q 016755 162 --NMEPSSSLVIEDSVIGVVAGKAAGME 187 (383)
Q Consensus 162 --g~~p~e~l~VGDs~~Di~~a~~aG~~ 187 (383)
|.+++++++|.|++.-..+....|+.
T Consensus 242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 242 YKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp CTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred cCCCChhHEEEEeCChHHhccCcCceEE
Confidence 88999999999999877776666654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0013 Score=70.63 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=66.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc------------------------CcEEEeCCCC--
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV-- 144 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~------------------------f~~i~~~~~~-- 144 (383)
++.|++.+.++.|++.|+++.++|+.+........ +.+|+... ...++.+.+.
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA-ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 57789999999999999999999999888777666 66776321 0112222211
Q ss_pred ----------------CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 145 ----------------~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
-+..-.|+-...+.+.+.-....++++||+.||+.|.+.||+.+.+
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM 744 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM 744 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe
Confidence 1112233333333333333346699999999999999999996654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00076 Score=70.95 Aligned_cols=99 Identities=15% Similarity=0.084 Sum_probs=66.2
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc-C-cEEEeCCCC-----------------CCCCCCh
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-F-SVIVGSDEV-----------------RTGKPSP 151 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~-f-~~i~~~~~~-----------------~~~kp~p 151 (383)
++.|++.+.++.|++.|+++.++|+.......... +.+|+... + ..++.+.+. -+..-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA-~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHH-HTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHH-HHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 46789999999999999999999998887766665 77887421 0 111111110 0122234
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 152 ~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+--..+.+.+.-..+.+.|+||+.||..|.+.|++.+.+
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm 605 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV 605 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe
Confidence 333333333332347899999999999999999995544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00077 Score=60.97 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=41.7
Q ss_pred CCCCChHHHHHHHHHcC-CCCCc--EEEEecChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg-~~p~e--~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
.+.+++.+++.+++++| +++++ +++|||+.||+.|++.+|+. +.+.+
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n 235 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKG 235 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCC
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecC
Confidence 56778999999999999 99999 99999999999999999996 44444
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0016 Score=68.55 Aligned_cols=100 Identities=10% Similarity=0.050 Sum_probs=66.6
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-c---EEEeCCC--------------CCCCCCChH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-S---VIVGSDE--------------VRTGKPSPD 152 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~---~i~~~~~--------------~~~~kp~p~ 152 (383)
++.|++.+.++.|++.|+++.++|+-......... +.+|+.... + .++.+.+ .-+..-.|+
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA-~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS-RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH-HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 47889999999999999999999998887776666 778875210 0 0011100 001112222
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEe
Q 016755 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 153 ~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
--..+.+.+.-..+.+.|+||+.||..|.+.|++.+.+-
T Consensus 614 ~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg 652 (920)
T 1mhs_A 614 HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE 652 (920)
T ss_dssp HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET
T ss_pred HHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc
Confidence 333333333333478999999999999999999977663
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0045 Score=54.93 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=27.0
Q ss_pred HHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 016755 98 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (383)
Q Consensus 98 ~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~ 132 (383)
+.|++|+++|++++++|+.+...+...+ +.+++.
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~-~~~~~~ 57 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYR-KELEVE 57 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHH-HHHTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC
Confidence 4567788899999999999988887777 566654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0078 Score=53.03 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=24.5
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc--CCEEEEec
Q 016755 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVP 192 (383)
Q Consensus 150 ~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a--G~~~i~v~ 192 (383)
|..+++.+++++| +++|||+.||+.|.+.+ |..+++-+
T Consensus 161 Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~N 200 (239)
T 1u02_A 161 KGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGE 200 (239)
T ss_dssp HHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred HHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECC
Confidence 3444555555554 77788888888888877 77655543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0084 Score=53.56 Aligned_cols=61 Identities=5% Similarity=-0.199 Sum_probs=44.4
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+-.|..+++.+ +|++++++++||| +.||++|.+.+|...+.+. +..+.....++.+..+-
T Consensus 194 ~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~--NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 194 EGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV--SPQDTVQRCREIFFPET 258 (262)
T ss_dssp TTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS--SHHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec--CCCHHHHHhhheeCCCC
Confidence 455677888887 9999999999999 9999999999997555663 33333333445555443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.0036 Score=55.31 Aligned_cols=45 Identities=9% Similarity=-0.151 Sum_probs=34.3
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~~ 193 (383)
.+-.|..+++.+ +|++++++++||| +.||++|.+.+|...+.+..
T Consensus 185 ~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred CCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 455566777776 8999999999999 99999999998875555543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.68 E-value=0.0074 Score=53.93 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=21.1
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHc
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY 38 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~ 38 (383)
.++|+|+|||||||++....+.....++++++
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 46899999999999987544434444444444
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=94.14 E-value=0.036 Score=48.68 Aligned_cols=14 Identities=57% Similarity=0.869 Sum_probs=12.3
Q ss_pred ccEEEEecCCcccc
Q 016755 9 MSCVILDLDGTLLN 22 (383)
Q Consensus 9 ik~viFDlDGTL~d 22 (383)
||+|+|||||||++
T Consensus 1 ikli~~DlDGTLl~ 14 (239)
T 1u02_A 1 MSLIFLDYDGTLVP 14 (239)
T ss_dssp -CEEEEECBTTTBC
T ss_pred CeEEEEecCCCCcC
Confidence 57899999999997
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=92.43 E-value=0.37 Score=44.92 Aligned_cols=87 Identities=20% Similarity=0.159 Sum_probs=60.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~---~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
.++||+.+.++.|++.|+++.++||++. ......+.+.+|+....+.|+++...... . ++ ....
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~-----~----~~----~~~~ 95 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS-----L----VN----KYSR 95 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG-----G----TT----TCSE
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH-----H----Hh----cCCE
Confidence 4678999999999999999999999863 33344453467887666777766542211 0 01 2356
Q ss_pred EEEEecChhhhHHHHhcCCEEEEe
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v 191 (383)
++++|-. ...+.++++|+..+..
T Consensus 96 v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 96 ILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp EEEESST-THHHHHHHHTCSEEEE
T ss_pred EEEECCH-HHHHHHHhCCCeEecc
Confidence 7888855 5677889999988753
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=92.07 E-value=0.048 Score=47.91 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=22.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHc
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY 38 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~ 38 (383)
.+++|+|+|||||||++....+.+...++++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l 35 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQKL 35 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence 356899999999999987544444455555544
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=91.39 E-value=0.11 Score=49.74 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=66.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-cCcE-EEeCCCCCCCCCChHHHHHHHHH-cCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSV-IVGSDEVRTGKPSPDIFLEAAKR-LNMEP 165 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~-~f~~-i~~~~~~~~~kp~p~~~~~~~~~-lg~~p 165 (383)
.+...||+.++|+.+. +.|.++|.|.+...+...++ +.++... +|.. +++.++++.. +.+-+.+ +|.+.
T Consensus 81 ~V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl-~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl 152 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT 152 (442)
T ss_dssp EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred EEEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHH-HHhccCCccccceEEEecCCCCc------eeeehHHhcCCCc
Confidence 4568899999999998 55999999999999999988 7777665 6765 6666655421 1112343 48899
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+.+++|.|++.-...- . ..|.|..
T Consensus 153 ~~vvIIDd~p~~~~~~---p-N~I~I~~ 176 (442)
T 3ef1_A 153 SMVVVIDDRGDVWDWN---P-NLIKVVP 176 (442)
T ss_dssp TTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred ceEEEEECCHHHhCCC---C-CEEEcCC
Confidence 9999999999533221 2 4555555
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=91.07 E-value=0.073 Score=47.73 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=37.5
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeC---CChHHHHHHHHhhcCCc-ccCcEEEeC
Q 016755 92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWN-ESFSVIVGS 141 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~---~~~~~i~~~l~~~~gl~-~~f~~i~~~ 141 (383)
++|++.+.|+.++++|++++++|| .....+...+ +.+|+. ..++.++++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l-~~lg~~~~~~~~ii~~ 83 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY-HKLGLFSITADKIISS 83 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCTTCCGGGEEEH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH-HHCCcCCCCHhhEEcH
Confidence 567889999999999999999998 3445566666 677886 656666654
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=90.83 E-value=2.8 Score=36.53 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=64.1
Q ss_pred HHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCcccCc--EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 016755 96 ANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (383)
Q Consensus 96 ~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~gl~~~f~--~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VG 172 (383)
+...|..+..+. .--+++|++.---.-.++ -..|+..+|. .|+++-.+ ++...|+.+.+++| +...-++||
T Consensus 164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~-LLygL~~~fpieNIYSa~ki----GKesCFerI~~RFG-~k~~yvvIG 237 (274)
T 3geb_A 164 SLKALNLINSRPNCVNVLVTTTQLIPALAKV-LLYGLGSVFPIENIYSATKT----GKESCFERIMQRFG-RKAVYVVIG 237 (274)
T ss_dssp HHHHHHHHHHSTTEEEEEEESSCHHHHHHHH-HHTTCTTTSCGGGEEETTTT----CHHHHHHHHHHHHC-TTSEEEEEE
T ss_pred HHHHHHhhccCCceeEEEEecCchHHHHHHH-HHhhcccceecccccchhhc----CHHHHHHHHHHHhC-CCceEEEEC
Confidence 344555555543 223567766533222222 2467777764 67776553 36789999999997 557889999
Q ss_pred cChhhhHHHHhcCCEEEEecC
Q 016755 173 DSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 173 Ds~~Di~~a~~aG~~~i~v~~ 193 (383)
|+..--++|+..+++.+-|..
T Consensus 238 DG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 238 DGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp SSHHHHHHHHHTTCCEEECCS
T ss_pred CCHHHHHHHHHcCCCeEEeec
Confidence 999999999999999988866
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.82 E-value=1.7 Score=38.11 Aligned_cols=84 Identities=27% Similarity=0.332 Sum_probs=54.3
Q ss_pred CchHHHHHHHHHHCCCCEEEEeCCChHHHHH---HHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 93 LPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 93 ~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~---~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
.|++.+.++.++++|++++++||.+...... .+ ..+|+....+.++++. ......+++.. ...++.
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l-~~lg~~~~~~~i~~~~---------~~~~~~l~~~~-~~~~v~ 87 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL-LKMGIDVSSSIIITSG---------LATRLYMSKHL-DPGKIF 87 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH-HTTTCCCCGGGEEEHH---------HHHHHHHHHHS-CCCCEE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEEecH---------HHHHHHHHHhC-CCCEEE
Confidence 4678889999999999999999987543333 33 3467654445566542 23333444432 346788
Q ss_pred EEecChhhhHHHHhcCCEE
Q 016755 170 VIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~~~ 188 (383)
++|+. .....++..|+..
T Consensus 88 viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 88 VIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp EESCH-HHHHHHHHHTSCB
T ss_pred EEcCH-HHHHHHHHcCCee
Confidence 88874 5666777778753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=85.66 E-value=0.24 Score=43.58 Aligned_cols=44 Identities=9% Similarity=-0.165 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecC----hhhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS----VIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs----~~Di~~a~~aG~~~i~v~~ 193 (383)
.+-.|..+++.+++ +++++++|||+ .||++|.+.+|.-.+.|..
T Consensus 184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 45556677777776 89999999996 9999999988865555543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=80.21 E-value=1.3 Score=41.72 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=18.1
Q ss_pred ccEEEEecCCcccccHHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEV 30 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a 30 (383)
||.|+||+|||+++.+..+..+
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~ 22 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS 22 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEecCceeechhhhccHH
Confidence 5789999999999987666444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 383 | ||||
| d1nb9a_ | 147 | b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapie | 2e-42 | |
| d1n08a_ | 154 | b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Sc | 5e-42 | |
| d1mrza1 | 130 | b.43.5.1 (A:159-288) Riboflavin kinase domain of b | 1e-28 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 3e-19 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 8e-19 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 3e-18 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 8e-18 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 8e-18 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 4e-17 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 2e-16 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 9e-16 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 1e-15 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 1e-14 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 3e-14 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 4e-14 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 5e-14 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 1e-13 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-13 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 4e-13 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 5e-13 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 6e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-12 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 9e-10 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 3e-09 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 7e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 3e-05 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 4e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-04 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 0.003 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 0.003 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 0.004 |
| >d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 2e-42
Identities = 67/141 (47%), Positives = 101/141 (71%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 296 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 355
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 64 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123
Query: 356 VAERALDLPLYSKYRDDPYLK 376
A++ L+LP Y K ++D + +
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQ 144
|
| >d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 142 bits (359), Expect = 5e-42
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
Query: 215 RPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP 274
RPE G + ++ P G VV G GRGSK LGIPTAN+S + ++L
Sbjct: 1 RPEIVG----PEKVQ---SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD 53
Query: 275 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 334
SGVYFG+ + + V+ MVMS+GWNPY+ N ++ E L+ EDFY+E + ++++GYI
Sbjct: 54 SGVYFGY-AMVQKRVFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYI 112
Query: 335 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 376
RPE N+ L+ LI IH D +VA ++D P YS Y+ DP+ K
Sbjct: 113 RPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 154
|
| >d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase domain of bifunctional FAD synthetase species: Thermotoga maritima [TaxId: 2336]
Score = 106 bits (265), Expect = 1e-28
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 237 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSI 296
+ I G V K G K LG PTAN+ V + GVY L VM++
Sbjct: 2 FEIEGIVHKDREFGRK-LGFPTANIDRGNEKLV--DLKRGVYLVRVHLPDGKKKFGVMNV 58
Query: 297 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKV 356
G+ P +A + +F+ D Y + L L ++ ++R E F S+E L A I +D K
Sbjct: 59 GFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKS 118
Query: 357 AERALDLPLYSK 368
A +D + SK
Sbjct: 119 ARNMIDDIINSK 130
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 82.5 bits (202), Expect = 3e-19
Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 10/188 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVED 65
I DL +++ D F+ VL + +K +G+ + E
Sbjct: 3 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA 60
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
A + + ++ P ++ L G + + SN++R
Sbjct: 61 LCHEMALPLSYEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
++ I S ++ KP I+ + PS ++ +D+ + G
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLG 178
Query: 186 MEVVAVPS 193
+ + V
Sbjct: 179 ITSILVKD 186
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 82.2 bits (201), Expect = 8e-19
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLP 69
I D+DG L++++ ++ + G + R + + +
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 65
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
++ E V V + + + + L R L + +++ + K+
Sbjct: 66 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 125
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M +
Sbjct: 126 DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI 185
Query: 190 AVPSLPKQTH-RYTAADEVINSLLDLRPE 217
VP+ Q R+ A+ ++SL +L +
Sbjct: 186 VVPAPEAQNDPRFVLANVKLSSLTELTAK 214
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (199), Expect = 3e-18
Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 40/243 (16%)
Query: 12 VILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPL-------- 56
++LD++GT E +K +L + +E + ++ ++ K
Sbjct: 10 ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGA 69
Query: 57 ------------------EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-----KVKAL 93
+ V K + ++ K +
Sbjct: 70 VPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFF 129
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
++ G+ + + S+ + + + V D K +
Sbjct: 130 ADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES 189
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSL 211
+ + A + ++ L + D A + A + V V P T +I S
Sbjct: 190 YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSF 249
Query: 212 LDL 214
+L
Sbjct: 250 SEL 252
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 79.5 bits (194), Expect = 8e-18
Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 6/209 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DG L++++ + ++V L + G E + + + VE
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
+++ + L + + + + S+SHR + +
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KP PDIFL A + + P +V+EDSV G+ +AAGM V+
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184
Query: 192 PS------LPKQTHRYTAADEVINSLLDL 214
A+ VI+ + DL
Sbjct: 185 TGASHTYPSHADRLTDAGAETVISRMQDL 213
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.4 bits (194), Expect = 8e-18
Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 24/203 (11%)
Query: 12 VILDLDGTLLNTD------------GMFSEVLKTFLVKYGKE------WDGREKHKIVGK 53
DLDG L + + L E G+
Sbjct: 3 AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
E + G ++ +++++S + L G +
Sbjct: 63 LMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQAAIALKKKGFTTCIV 119
Query: 114 SNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+N+ + + S ++ F ++ S +V KP P I+ L +P+ +
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179
Query: 171 IEDSVIGVVAGKAAGMEVVAVPS 193
++D + + GM + V +
Sbjct: 180 LDDFGSNLKPARDMGMVTILVHN 202
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 77.6 bits (189), Expect = 4e-17
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 14/214 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ + E++ + D
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK 63
Query: 71 AKHEFV-------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E N+ Y + PG +L+K L + + +ALAS S
Sbjct: 64 VSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF-- 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ + F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K
Sbjct: 122 -LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217
+G + V ++ E
Sbjct: 181 SGALPIGVGR----PEDLGDDIVIVPDTSHYTLE 210
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.6 bits (184), Expect = 2e-16
Identities = 34/206 (16%), Positives = 58/206 (28%), Gaps = 24/206 (11%)
Query: 9 MSCVILDLDGTLLNTD------------GMFSEVLKTFLVKYGKEWD------GREKHKI 50
+ + DLDG L + +L K G E G
Sbjct: 2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
E E + K+ + E+ F + K + L G
Sbjct: 62 WIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPMLQAALMLRKKGFTT 118
Query: 111 ALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167
A+ +N+ + F ++ S +V KP P I+ L PS
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178
Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193
+ ++D + + GM + V
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQD 204
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 74.1 bits (180), Expect = 9e-16
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ VI GT ++ EV K G E K +G ++ + E
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61
Query: 68 LPCAKHEFVNEVYSMFSDHLC--------------KVKALPGANRLIKHLSCHGVPMALA 113
+ + ++ + + G +I L G+ +
Sbjct: 62 IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIE 172
+ R ++ +V D+V G+P P + + A L + + +
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 181
Query: 173 DSVIGVVAGKAAGMEVVAV 191
D+V + G+ AGM V V
Sbjct: 182 DTVSDMKEGRNAGMWTVGV 200
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 72.8 bits (177), Expect = 1e-15
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 10/183 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
I DL GTLL+ + L YG D ++ + +
Sbjct: 5 DYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF------AIETFAP 58
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F+ + + L G + L++ +S G L S+ + +E
Sbjct: 59 NLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIA 118
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ V S R P+ L ++ + LVI D I + AG+AAG++
Sbjct: 119 AYFTEVVTSSSGFKRKPN--PESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHL 174
Query: 191 VPS 193
S
Sbjct: 175 FTS 177
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 70.3 bits (170), Expect = 1e-14
Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 11/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKT------PLEEAAII 62
+ DL GTL + + + F + W ++ ++ ++A
Sbjct: 5 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 64
Query: 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
+ + S D ++ ++ L G+ +A+ SN +I+
Sbjct: 65 ALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID 124
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ G + F ++ D V+ KP ++ A + L ++ S+ L + + +
Sbjct: 125 -AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 183
Query: 183 AAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 214
G + D + SL +
Sbjct: 184 YFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.1 bits (167), Expect = 3e-14
Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 19/223 (8%)
Query: 10 SCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-- 60
S +LD++GT+ + F+ + + + ++ E+
Sbjct: 4 STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63
Query: 61 ---IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
++ +D P K + K A IK + + + +
Sbjct: 64 ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123
Query: 118 RATIE------SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + N + K + + + + S L +
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFL 182
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + + A G+ +V + L
Sbjct: 183 SDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 68.3 bits (165), Expect = 4e-14
Identities = 30/207 (14%), Positives = 73/207 (35%), Gaps = 9/207 (4%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP 69
+ I DLDGTLL++ ++ ++ +D + + + K +++ + V +
Sbjct: 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL 61
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
+ ++ +V +PGA ++ G+ + ++
Sbjct: 62 DVEV-LNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGV 120
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+ + S VR KPSP+ + + ++ I D + V + +G++ +
Sbjct: 121 ESYFTEILTSQSGFVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 178
Query: 190 AVPSLPKQTHRYTAADEVINSLLDLRP 216
+ I +L D+
Sbjct: 179 NF------LESTYEGNHRIQALADISR 199
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 68.4 bits (165), Expect = 5e-14
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 5/204 (2%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
++ D+DGTL N+ ++ V++ L YGK + + K + E
Sbjct: 5 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAAS 61
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F + + + H +++ PG L + L S R +
Sbjct: 62 EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYP 119
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 120 FMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179
Query: 191 VPSLPKQTHRYTAADEVINSLLDL 214
+ LD+
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 67.9 bits (164), Expect = 1e-13
Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 15/225 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG---- 67
V+ D GTL + + + + G+ + K + + L D+
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYP-GRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 68 --LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
L E F + + P + + A+ SN ++
Sbjct: 64 EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ- 122
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ G +SF ++ D R KP PD + + L + P+ L + + V K
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKN 182
Query: 184 AGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
G V V +L ++ T A + L +R E + P
Sbjct: 183 FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 69.1 bits (168), Expect = 2e-13
Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)
Query: 43 DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 102
+ + + +E + + Y K + + ++ + L+
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 149
L G + +A+ G F I + +V KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 150 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
+P ++ A N + ++ DS+ +++ + G + +
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345
Query: 196 KQTH-----RYTAADEVINSLLDLR 215
K AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 66.1 bits (159), Expect = 4e-13
Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 12/215 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+ DLDGTL+N+ + + + L + + D+
Sbjct: 6 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 65
Query: 71 AKHEFVNEVYSMFS---------DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
A+ E + + F + + P ++ L G +A+ +N +
Sbjct: 66 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 125
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
+ + G + FS ++G + KP P F + + P L + DS + A
Sbjct: 126 QPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAA 184
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+AG VV + + D + + D+
Sbjct: 185 HSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.1 bits (155), Expect = 5e-13
Identities = 26/217 (11%), Positives = 54/217 (24%), Gaps = 53/217 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W V+
Sbjct: 1 MTRLPKLAVFDLDYTL---------------------WPF-----------------WVD 22
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ P V + ++ P ++ L GVP+A AS + ++
Sbjct: 23 THVDPPFHKSSDGTVRDRRGQN---IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQ 79
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F F + + S + +D ++
Sbjct: 80 LLELFDLGKYFIQREIYP-----GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRL 134
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221
G+ + + + + L + GL
Sbjct: 135 GVTCIHIR------DGMS-LQTLTQGLETFAKAQAGL 164
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 65.6 bits (158), Expect = 6e-13
Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 15/221 (6%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 2 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 58
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
GL A+ + ++ + + L G L+ LS + +
Sbjct: 59 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNMEPSSSLVIEDSV 175
G + F +D+ P I LE N PS ++I D+
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTE 178
Query: 176 IGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+ + +AV + + + + +
Sbjct: 179 HDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 62.7 bits (151), Expect = 5e-12
Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 26/231 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DGT+ D ++KTF EW + + ++E +
Sbjct: 7 IICDFDGTITMND-NIINIMKTFA---PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSL 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E + V K G + ++ H +P + S +
Sbjct: 63 KEEITSFVLE-------DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVE 114
Query: 132 NESF---SVIVGSDEVRT----------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +D + L+ ++I DSV V
Sbjct: 115 KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDV 174
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 229
A K + + A L + ++R E + Q+W++
Sbjct: 175 EAAKLSDL-CFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 56.0 bits (133), Expect = 9e-10
Identities = 25/208 (12%), Positives = 67/208 (32%), Gaps = 8/208 (3%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
++ + DLDGTL+++ + G + + PLE +
Sbjct: 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQ 63
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ Y + ++ ++I L L + + T ++ +
Sbjct: 64 ISEAVQIYRSYYKAKGIYEAQLF-----PQIIDLLEELSSSYPLYITTTKDTSTAQDMAK 118
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+ F D+ +A + + P +++I D+ ++ + G++
Sbjct: 119 NLEIHHF-FDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDL 214
+A+ + D + + L++
Sbjct: 178 LAITWGFGEQADLLNYQPDYIAHKPLEV 205
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.9 bits (130), Expect = 3e-09
Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------- 61
V DLD TL++T G + + ++ +E+ +I+ + +
Sbjct: 8 AVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTC 67
Query: 62 -----------IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVP 109
+++ + E Y ++ + + ++ L V
Sbjct: 68 ITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VR 126
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ L +N R T KI F IV E + KP+P IF L ++P +
Sbjct: 127 LLLLTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185
Query: 170 VIEDSVI-GVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
++ D++ + G AG++ S +++S+L+L
Sbjct: 186 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 53.3 bits (126), Expect = 7e-09
Identities = 24/221 (10%), Positives = 60/221 (27%), Gaps = 15/221 (6%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---------------EWDGREKHKIVGK 53
+ V D GTLL+ +G LK G + +
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
P+ + V ++ + + + L + + +
Sbjct: 62 RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMI 121
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
++S + + + + S+ + L K + V ++
Sbjct: 122 TDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDN 181
Query: 174 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
V K GM + + ++ + D +++ L ++
Sbjct: 182 PVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 42.5 bits (98), Expect = 3e-05
Identities = 38/216 (17%), Positives = 67/216 (31%), Gaps = 31/216 (14%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL ++ D D TL+N +E + + G E + ++ K + L + +
Sbjct: 4 KKL---ILFDFDSTLVN-----NETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKR 55
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
L E GA IK L G +A+ S +
Sbjct: 56 VSLLKDLPIEKVEKAIKRITPTE------GAEETIKELKNRGYVVAVVSGGFDIAVNKIK 109
Query: 126 SYQHGWNESFSVIVGSDEVRT---------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176
+ ++ D T +I + AK + ++ + D
Sbjct: 110 EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAN 169
Query: 177 GVVAGKAAGMEVV--AVPSLPKQTHRYTAADEVINS 210
+ K AG+++ A P L + AD I
Sbjct: 170 DISMFKKAGLKIAFCAKPILKE------KADICIEK 199
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 41.4 bits (96), Expect = 4e-05
Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)
Query: 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 122
D K+ PG + L G + + +N
Sbjct: 19 SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ +DE KP + M+ ++S VI D + +
Sbjct: 79 FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138
Query: 183 AAGMEVVAV 191
G+ +
Sbjct: 139 NMGINGLRY 147
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 5e-04
Identities = 37/225 (16%), Positives = 63/225 (28%), Gaps = 25/225 (11%)
Query: 4 PLKKLMS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
L+KL V D+D T++ E + G E E + + A
Sbjct: 2 ELRKLFYSADAVCFDVDSTVIR-----EEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA 56
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ E L E V + + HL PG L+ L V + L S R+
Sbjct: 57 ALTERLALIQPSREQVQRLIAEQPPHLT-----PGIRELVSRLQERNVQVFLISGGFRSI 111
Query: 121 I----------ESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + + G DE T + + + +
Sbjct: 112 VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKII 171
Query: 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I D + A A + + A I ++L
Sbjct: 172 MIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 36.6 bits (83), Expect = 0.003
Identities = 26/248 (10%), Positives = 59/248 (23%), Gaps = 44/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
++DLDGT+ + + +
Sbjct: 4 GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 63
Query: 48 HKIVGKTPLEEAAIIVEDYG----------------LPCAKHEFVNEVYSMFSDHLCKVK 91
+ T +++ + A E+ L
Sbjct: 64 PASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTEL 123
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
+ + + + + + T + + V GKP
Sbjct: 124 SYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKA 183
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS---LPKQTHRYTA-ADE 206
I A L +E +++ D+ + +G G++ + V S
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243
Query: 207 VINSLLDL 214
V++SL +
Sbjct: 244 VVDSLDEW 251
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 36.6 bits (83), Expect = 0.003
Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 45/248 (18%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGR 45
+ VI D+DG L++ + + L
Sbjct: 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62
Query: 46 EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALP-----GANRLI 100
+ + + A + G ++ ++ P G R
Sbjct: 63 VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122
Query: 101 KHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIF 154
H +A+ + + I G GKPSP I
Sbjct: 123 NWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182
Query: 155 LEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS-------LPKQTHRYTAADE 206
A ++ ++++ D++ ++AG AG+E + V S + R
Sbjct: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR---PSW 239
Query: 207 VINSLLDL 214
+ S+ ++
Sbjct: 240 IYPSVAEI 247
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 35.7 bits (81), Expect = 0.004
Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 61 IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
I D P E V + + V + + + + A+
Sbjct: 33 TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92
Query: 116 SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + ++E+ + + KP+P + +EA KRL ++ SL++
Sbjct: 93 VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D + + AGK AG+ + I L D
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| d1nb9a_ | 147 | Riboflavin kinase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d1n08a_ | 154 | Riboflavin kinase {Fission yeast (Schizosaccharomy | 100.0 | |
| d1mrza1 | 130 | Riboflavin kinase domain of bifunctional FAD synth | 100.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.95 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.94 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.93 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.93 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.91 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.9 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.86 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.86 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.85 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.83 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.75 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.73 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.73 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.7 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.69 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.66 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.65 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.61 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.58 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.49 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.45 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.38 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.15 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.09 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.97 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.94 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.83 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.77 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.6 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.6 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.58 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.53 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.49 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.48 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.44 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.42 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.4 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.38 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.15 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.87 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.33 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.13 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.75 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.98 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.97 | |
| d1mrza2 | 157 | FMN adenylyltransferase domain of bifunctional FAD | 95.63 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 93.93 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.82 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 91.88 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 91.45 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 90.37 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 88.97 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 86.79 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 84.14 |
| >d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-50 Score=323.80 Aligned_cols=142 Identities=47% Similarity=0.955 Sum_probs=131.3
Q ss_pred ceeeeeeeeecccCC-CcccCCcccccCCCCCccccC-CCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEEe
Q 016755 236 PWYIGGPVVKGLGRG-SKVLGIPTANLSTEGYSDVLS-EHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWL 313 (383)
Q Consensus 236 p~~~~G~v~~G~~~g-~~~lg~ptaN~~~~~~~~~~p-~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~~ 313 (383)
||+++|+|+||+++| |+ ||||||||.++.. .++| .++.|||++++.+.++++|+||+|||.||||+++..++|+|+
T Consensus 4 Py~i~G~Vv~G~~~G~r~-LGfPTANl~~~~~-~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~~~~~~E~h~ 81 (147)
T d1nb9a_ 4 PYFCRGQVVRGFGRGSKQ-LGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHI 81 (147)
T ss_dssp SEEEEEECBCCSSSCGGG-GTCCCEECCHHHH-HTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSSCCEEEEEEE
T ss_pred CEEEEEEEEeCCccCCCc-cCcCCcCCcCchh-hccccccccCceEEEEEecCCCccceEEEeccccccccccceEEEEE
Confidence 899999999999999 64 9999999987665 4444 346899999999966789999999999999988778999999
Q ss_pred ccCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCccccC
Q 016755 314 LHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLKITS 379 (383)
Q Consensus 314 ~~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (383)
|+||++||||++++|+|++|||+|+||+|+|+|++||++|++.||++|+.+.+.++++++||++|+
T Consensus 82 l~dF~~dlYG~~i~V~~~~~iR~e~KF~s~~~L~~qI~~Di~~ar~~l~~~~~~~~~~~~~~~~~~ 147 (147)
T d1nb9a_ 82 MHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEYLKIKEDNFFQVSK 147 (147)
T ss_dssp SSCCSSCCTTSEEEEEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHTTSHHHHGGGGCHHHHTTC
T ss_pred eccCCCceeeeEEEEEEEeEecCCcCcCCHHHHHHHHHHHHHHHHHHHCChhhhhhccCchhccCC
Confidence 955999999999999999999999999999999999999999999999999999999999999885
|
| >d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.3e-48 Score=319.01 Aligned_cols=140 Identities=46% Similarity=0.886 Sum_probs=127.2
Q ss_pred CCceeeeeeeeecccCC-CcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccCCcceEEEE
Q 016755 234 SEPWYIGGPVVKGLGRG-SKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPW 312 (383)
Q Consensus 234 g~p~~~~G~v~~G~~~g-~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~e~~ 312 (383)
-.||+++|+|+||+++| | +||||||||.++....++..|+.|||++|+.++ +++|+||+|||+||||++.++++|||
T Consensus 13 PyPy~i~G~Vv~G~~~G~R-~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i~-~~~y~~v~niG~rPTf~~~~~~~Evh 90 (154)
T d1n08a_ 13 PYPIRFEGKVVHGFGRGSK-ELGIPTANISEDAIQELLRYRDSGVYFGYAMVQ-KRVFPMVMSVGWNPYYKNKLRSAEVH 90 (154)
T ss_dssp TCCEEEEEEEECCSSSCGG-GGTCCCEEECGGGTTTTTTTSCSEEEEEEEEET-TEEEEEEEEEEECTTCSSCCEEEEEE
T ss_pred CCCEEEEEEEEeCCccCCc-ccCcCCeeecCccccccccccccceEEEEEeee-ceeEEEEEeeccchhcccccceEEEE
Confidence 45679999999999999 6 599999999886653444223589999999995 58999999999999998878899999
Q ss_pred eccCCCc-cccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccccccCCCCcc
Q 016755 313 LLHEFDE-DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 376 (383)
Q Consensus 313 ~~~~f~~-~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 376 (383)
||| |++ |+||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+++.|+.|++|+||+
T Consensus 91 ild-f~~~dlYg~~i~V~~~~~iR~e~kF~s~e~L~~qI~~D~~~ar~~L~~~~~~~~~~~~~~~ 154 (154)
T d1n08a_ 91 LIE-RQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 154 (154)
T ss_dssp ETT-CCSCCCTTCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHTSHHHHGGGGCGGGC
T ss_pred Eec-ccchhhcCEEEEEEEeeeccCCcccCCHHHHHHHHHHHHHHHHHHHcChhHHhhccCcccC
Confidence 999 996 999999999999999999999999999999999999999999999999999999995
|
| >d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase domain of bifunctional FAD synthetase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=6.8e-45 Score=290.37 Aligned_cols=124 Identities=31% Similarity=0.476 Sum_probs=94.7
Q ss_pred ceeeeeeeeecccCCCcccCCcccccCCCCCccccCCCCCeEEEEEEEEecCceEEEEEEeCCCCcccC-CcceEEEEec
Q 016755 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDN-AEKTIEPWLL 314 (383)
Q Consensus 236 p~~~~G~v~~G~~~g~~~lg~ptaN~~~~~~~~~~p~~~~Gvy~~~~~~~~~~~~~~~~~iG~~pt~~~-~~~~~e~~~~ 314 (383)
.|+++|+|+||+++||+ ||||||||.+++. .++| |+.|||++|+++.++.+|+|++|||+||||++ ...++|+||+
T Consensus 1 yy~i~G~V~~G~~~Gr~-lGfPTANl~~~~~-~~~~-p~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi~ 77 (130)
T d1mrza1 1 YFEIEGIVHKDREFGRK-LGFPTANIDRGNE-KLVD-LKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYIL 77 (130)
T ss_dssp CCEEEEEC------------CCCEECBCCSS-CBCC-CCSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEET
T ss_pred CEEEEEEEEeCCccccc-cCCCCCCcccccc-cccc-cccceeEEEEEEeeccccceEEEEEeecccccccceeEEEEEc
Confidence 37899999999999996 9999999998776 4544 35899999999866689999999999999975 5678999999
Q ss_pred cCCCccccCCeEEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Q 016755 315 HEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDL 363 (383)
Q Consensus 315 ~~f~~~~yg~~~~v~~~~~~r~e~~f~~~~~l~~~i~~d~~~~~~~~~~ 363 (383)
| |++|+||++++|+|++|||+|+||+|+++|++||++|++.||++|++
T Consensus 78 d-f~~dlYg~~i~v~f~~~lR~e~kF~s~~eL~~qI~~Di~~ar~~l~~ 125 (130)
T d1mrza1 78 D-FEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMIDD 125 (130)
T ss_dssp T-CCSCCTTCEEEEEEEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
T ss_pred c-cCcccCCCEEEEEEEEEeCCCcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9 99999999999999999999999999999999999999999999975
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=6.1e-30 Score=225.00 Aligned_cols=208 Identities=23% Similarity=0.376 Sum_probs=172.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (383)
.+|++||||+||||+|+.+.+..+++++++++|.+++.. .+....+......+.......... .....+.....+.+.
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI 80 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999887654 345566667766666655555443 334445555444444
Q ss_pred hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
... ....++||+.++|+.|+++|++++++||++...+...+ +.+|+.++|+.++++++.+.+||+|++|+.+++++|+
T Consensus 81 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~ 159 (218)
T d1te2a_ 81 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV 159 (218)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred HhhhccccccchHHHHHHHhhhcccccccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence 433 45678999999999999999999999999999999888 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc-ccccccchhhccccccC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLR 215 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~-~~~~~a~~vi~~l~e~~ 215 (383)
+|++|++|||+.+|+.+|+++|+.+++|+...... .....++.+++++.|+.
T Consensus 160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred CchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 99999999999999999999999999997754332 23457788999998864
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.97 E-value=1.6e-30 Score=227.21 Aligned_cols=202 Identities=20% Similarity=0.350 Sum_probs=173.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (383)
|++|+|+|||||||+|+.+.+..+++.+++++|.+..........+....+.. ...+.. ...+++...+.+.+.+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAM----TELGIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHH----HHTTCCGGGHHHHHHHHHHHHTT
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhh----hccccchhhHHHHHHHhhhhhcc
Confidence 46899999999999999999999999999999999988888888777765443 333433 3345666666676767
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCC
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p 165 (383)
.....+++||+.++|+.|++ +++++++||+....+...+ +++|+..+|+.++++++...+||+|+++..+++++|++|
T Consensus 77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cccccccccchhhhhhhhcc-ccccccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 67788999999999999975 6999999999999999888 889999999999999999999999999999999999999
Q ss_pred CcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 166 ~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++|++|||+.+|+.+|+++|+.++++.++.........++++++++.++
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence 9999999999999999999999999988765555545667888888774
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=5.5e-28 Score=210.34 Aligned_cols=195 Identities=17% Similarity=0.251 Sum_probs=157.9
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 016755 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (383)
Q Consensus 10 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
++++||+||||+|+.+.+..+++++++++|.+.+.+.... ..+......+..++...+.. .+.+.......+.....
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 79 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNA 79 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTCGG
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh--HHHHHHHHHHHHHhhcc
Confidence 5899999999999999999999999999999887665543 44666677777777665543 33333333344444446
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
...++||+.++|+.|+++|++++++||++.. ....+ +++|+..+|+.++++++....||+|++|+.+++++|++|++|
T Consensus 80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 157 (204)
T d2go7a1 80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 157 (204)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred cCcccchHHhhhhcccccccchhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceE
Confidence 6889999999999999999999999998765 45567 789999999999999999999999999999999999999999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
++|||+.+|+.+|+++|++++++.++.. .++..++++.++
T Consensus 158 l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl 197 (204)
T d2go7a1 158 YYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADI 197 (204)
T ss_dssp EEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHH
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHH
Confidence 9999999999999999999999987532 224455555543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=3.1e-27 Score=207.92 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=165.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHH----hCCCCCHHHHHHH--
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVED----YGLPCAKHEFVNE-- 78 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 78 (383)
|.++|+|+||+||||+|+.+.+..+++++++++|.+.. .+......+..........+.. .............
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 80 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHH
Confidence 35799999999999999999999999999999997654 4445666666655443333322 2222222222111
Q ss_pred -HHHHHH-hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHH
Q 016755 79 -VYSMFS-DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (383)
Q Consensus 79 -~~~~~~-~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~ 156 (383)
...... .......++||+.++|+.|++.|++++++||++...+...+ +.+|+..+|+.++++++.+..||+|+++..
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~ 159 (224)
T d2hsza1 81 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 159 (224)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHH
Confidence 111111 12246789999999999999999999999999999999888 889999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccCc
Q 016755 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRP 216 (383)
Q Consensus 157 ~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~~ 216 (383)
++++++++|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++..
T Consensus 160 ~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ 221 (224)
T d2hsza1 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 221 (224)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred HHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHH
Confidence 99999999999999999999999999999999999986543332 3467899999998643
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=4.2e-28 Score=218.76 Aligned_cols=209 Identities=19% Similarity=0.240 Sum_probs=163.3
Q ss_pred CccEEEEecCCcccccHHH-HHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHH----------HhCCCCCH---H
Q 016755 8 LMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE----------DYGLPCAK---H 73 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~---~ 73 (383)
+||+|+||+||||+|+... ...++.++++++|.+++.+......|....+....+.. .++..... .
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 80 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence 5899999999999998543 36788889999999998888777777665544433222 22222222 2
Q ss_pred HHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC-cEEEeCCCCCCCCCCh
Q 016755 74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP 151 (383)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f-~~i~~~~~~~~~kp~p 151 (383)
.+...+.+.+...+ ....++||+.++|+.|+++|++++++||++...+...+ +.+|+..+| +.+++++++..+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p 159 (257)
T d1swva_ 81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYP 159 (257)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHH-HHHhhcccccccccccccccccccCh
Confidence 23334444454444 34689999999999999999999999999999999888 788898876 7889999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCEEEEecCCCCcc----c---------------------cccccc
Q 016755 152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT----H---------------------RYTAAD 205 (383)
Q Consensus 152 ~~~~~~~~~lg~~-p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~----~---------------------~~~~a~ 205 (383)
++|..+++++|+. +++|+||||+.+|+.+|+++|+.+|+|.++.... + ....|+
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999996 4899999999999999999999999999875321 0 012378
Q ss_pred hhhccccccCcc
Q 016755 206 EVINSLLDLRPE 217 (383)
Q Consensus 206 ~vi~~l~e~~~~ 217 (383)
++|+++.+++..
T Consensus 240 ~vi~~l~eL~~i 251 (257)
T d1swva_ 240 FTIETMQELESV 251 (257)
T ss_dssp EEESSGGGHHHH
T ss_pred EEECCHHHHHHH
Confidence 999999886543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.95 E-value=7.9e-27 Score=205.30 Aligned_cols=184 Identities=25% Similarity=0.359 Sum_probs=153.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSMF 83 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 83 (383)
|+|+|+||+||||+|+...+..++.+++..+|.+..... .....+.+.......+....+...+...+. ....+.+
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 689999999999999988889999999999998766444 445567777777777776666555554432 3333444
Q ss_pred Hhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 84 ~~~~---~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
.... ....++||+.++|+.|++.|++++++|++.. ....+ +..++..+|+.++++++.+.+||+|++|+.++++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~ 157 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHH
T ss_pred cccccccccccccCCceeccccccccccceEEEeecch--hhHHH-HhhccccccccccccccccccccChHHHHHHHHH
Confidence 4433 2457899999999999999999999998754 45566 7889999999999999999999999999999999
Q ss_pred cCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 161 lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|++|++|++|||+.+|+.+|+++|+.+|+|.++
T Consensus 158 ~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred cCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence 9999999999999999999999999999999874
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=4.8e-27 Score=201.84 Aligned_cols=178 Identities=22% Similarity=0.258 Sum_probs=150.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
|++|+|+||+||||+|+...+..++.++++.+|.+.+........+......+..+ ... .+.+.+.+.+.+...
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~ 74 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETF----APN--LENFLEKYKENEARE 74 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHHH----CTT--CTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhhhh----hHH--HHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999888777766666655444333 222 233455566666666
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~ 166 (383)
.....++||+.++|+.|+++|++++++||++....+ .+ +.+++..+|+.+++++++...||+|++++.+++++++ +
T Consensus 75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~ 150 (187)
T d2fi1a1 75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-IL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--S 150 (187)
T ss_dssp TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--S
T ss_pred hhcCcccchhHHHHHHHHhhhccccccccCccchhh-hh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--C
Confidence 678899999999999999999999999998876654 67 7889999999999999999999999999999999986 4
Q ss_pred cEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 167 e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+|++|||+..|+.+|+++|+.+++++.+
T Consensus 151 ~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 151 SGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred CeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 5999999999999999999999999763
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=7.9e-27 Score=203.68 Aligned_cols=201 Identities=16% Similarity=0.233 Sum_probs=161.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
|.+||+|+||+||||+|+...+..++.++++++|.+. +.+.+....+......+...+. ..........+...+.
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLS----KDQISEAVQIYRSYYK 76 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSC----GGGHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhcccccc----chhhHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999764 4555666777766655443321 1223334444444443
Q ss_pred hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 85 ~~~-~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
... ....++||+.++|+.|+.. ++++++||++...++..+ +.+|+..+|+.++++++. ++|+|+++..+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~ 152 (210)
T d2ah5a1 77 AKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQL 152 (210)
T ss_dssp HTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTC
T ss_pred hhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhc
Confidence 333 4678899999999999877 589999999999999888 889999999999988875 68889999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhcccccc
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~ 214 (383)
+|++|++|||+.+|+.+|+++|+++++|.++...... ...|+.+++++.|+
T Consensus 153 ~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred ccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 9999999999999999999999999999886543332 24578899998875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.94 E-value=3.2e-26 Score=201.49 Aligned_cols=204 Identities=23% Similarity=0.359 Sum_probs=165.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
.+|+||||+||||+|+...+..+++++++++|.+++.+.. ..+.+....+....+....+.+..... ...+...+...
T Consensus 1 ~~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (222)
T d2fdra1 1 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASL-LDKSEKLLDMR 79 (222)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHH-HHHHHHHHHHH
T ss_pred CceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccc-hhHHHHHHHHH
Confidence 3789999999999999999999999999999999886665 556788888888888888887766443 33444433333
Q ss_pred -hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe-CCC--CCCCCCChHHHHHHHHHcC
Q 016755 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDE--VRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 -~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~-~~~--~~~~kp~p~~~~~~~~~lg 162 (383)
.....++||+.++|+.|+. +.+++|++....+...+ +++++..+|+.+++ +++ ....||+|+.|..+++++|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~ 155 (222)
T d2fdra1 80 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 155 (222)
T ss_dssp HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred hhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhC
Confidence 3568899999999998864 56899999999999888 88999999986544 443 4568999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc------ccccchhhccccccCc
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR------YTAADEVINSLLDLRP 216 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~------~~~a~~vi~~l~e~~~ 216 (383)
++|++|++|||+..|+.+|+++|+.++++.++...... ...|+.+++++.++..
T Consensus 156 ~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ 215 (222)
T d2fdra1 156 VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPA 215 (222)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHH
T ss_pred CCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHH
Confidence 99999999999999999999999999999886532211 2247899999988643
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.93 E-value=4.5e-26 Score=201.59 Aligned_cols=206 Identities=22% Similarity=0.308 Sum_probs=155.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHc-CCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCH--HH---HHHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKY-GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK--HE---FVNEVYSM 82 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~ 82 (383)
.|+|+||+||||+|+...+..++.+++.+. +....... ....+..........+...+.+... .. ..+.+...
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS-HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH-HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 478999999999999888888888877664 44333222 2233444555555666665554221 11 11222222
Q ss_pred HHhhh--ccCCCCchHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 83 FSDHL--CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 83 ~~~~~--~~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
+.+.. ....++||+.++|+.|+++| ++++++||++...+...+ +.+|+..+|+.++++++....||+|..+...+.
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~ 159 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERAR 159 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHH
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHHhh
Confidence 33322 34578999999999999987 899999999999999888 899999999999999999999999998777766
Q ss_pred Hc---CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc--ccccchhhccccccCc
Q 016755 160 RL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRP 216 (383)
Q Consensus 160 ~l---g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~--~~~a~~vi~~l~e~~~ 216 (383)
.+ +++|++|+||||+++|+.+|+++|+.+++|.++...... ...|+.+++++.++..
T Consensus 160 ~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~ 221 (228)
T d2hcfa1 160 RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 221 (228)
T ss_dssp HHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHH
T ss_pred hhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHH
Confidence 65 789999999999999999999999999999887554432 3467899999988643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.8e-25 Score=199.90 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=151.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhh----hh-----hh-------cCCCHH----HHHHHHHHH
Q 016755 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE----KH-----KI-------VGKTPL----EEAAIIVED 65 (383)
Q Consensus 6 ~~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~----~~-----~~-------~g~~~~----~~~~~~~~~ 65 (383)
+.+||+|+||+||||+|+......++.++++.++....... .. .. ...... ..+...+..
T Consensus 3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 82 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence 46899999999999999988887877777765543322111 00 00 011111 122223333
Q ss_pred hCCCCCHHHHHHHHHHHHH-hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCC
Q 016755 66 YGLPCAKHEFVNEVYSMFS-DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (383)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~ 144 (383)
.....+...+.......+. .......++||+.++|+.|+ +|++++++||++...+...+ +..|+..+|+.++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~ 160 (247)
T d2gfha1 83 TKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQ 160 (247)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGS
T ss_pred hccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhh-cccceEEeecccchhhhhhh-hhcccccccccccccccc
Confidence 3333333444443333332 23356789999999999998 57999999999999888888 788999999999999999
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEE-EecCCCCc-cccccccchhhccccccCccc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVV-AVPSLPKQ-THRYTAADEVINSLLDLRPEK 218 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i-~v~~~~~~-~~~~~~a~~vi~~l~e~~~~~ 218 (383)
+.+||+|++|..+++++|++|++|++|||++ +|+.+|+++|+.++ ++...... ......|+++++++.++...+
T Consensus 161 ~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp SSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred ccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999997 79999999999855 45443322 222446789999998875443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=2e-25 Score=197.77 Aligned_cols=201 Identities=19% Similarity=0.276 Sum_probs=147.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCC-CCChhhhhhh------------cC---CCHH----HHHHHHHHHhC
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKHKI------------VG---KTPL----EEAAIIVEDYG 67 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~-~~~~~~~~~~------------~g---~~~~----~~~~~~~~~~~ 67 (383)
|+|+|+||+||||+|...........+.+.++. .......... .+ .... +....+....+
T Consensus 1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T d1x42a1 1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG 80 (230)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 689999999999999877666555555555442 2332221111 11 1111 12222333333
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCC
Q 016755 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (383)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~ 147 (383)
...... +.+.+.... .....++||+.++|+.|+ +|++++++||++...+...+ +.+|+.++|+.++++++.+.+
T Consensus 81 ~~~~~~-~~~~~~~~~---~~~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~ 154 (230)
T d1x42a1 81 FKYPEN-FWEIHLRMH---QRYGELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFF 154 (230)
T ss_dssp CCCCTT-HHHHHHHHH---HHHCCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBC
T ss_pred hchHHH-HHHHHHHHH---HhhCcccccHHHHHHHhh-ccCceeeeeccccccchhhh-ccccccccccccccccccccc
Confidence 332211 111111111 124678999999999997 57999999999999998888 889999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
||+|++|+.+++++|++|++|++|||+. +|+.+|+++|+.++++++..........++++++++.++
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH
Confidence 9999999999999999999999999996 799999999999999988655555555778999999885
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.91 E-value=5.8e-24 Score=186.35 Aligned_cols=127 Identities=16% Similarity=0.261 Sum_probs=113.7
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCc
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e 167 (383)
....++|++.++++.+++.|++++++||+....+...+ ...++..+|+.++++++.+..||+|+.|..+++++|++|++
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 45778999999999999999999999999999888888 78899999999999999999999999999999999999999
Q ss_pred EEEEecChhhhHHHHhcCCEEEEecCCCCc-cccccccchhhccccccC
Q 016755 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLR 215 (383)
Q Consensus 168 ~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~a~~vi~~l~e~~ 215 (383)
|+||||+..|+.+|+++|+.++++.+.... ......|+++|++|.++.
T Consensus 169 ~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~ 217 (220)
T d1zrna_ 169 ILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVV 217 (220)
T ss_dssp EEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred EEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHH
Confidence 999999999999999999999999865332 223446789999998853
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=5.5e-24 Score=189.39 Aligned_cols=131 Identities=13% Similarity=0.113 Sum_probs=108.7
Q ss_pred HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe-CCCCCCCCCChHHHHHHHHHc
Q 016755 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 83 ~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~-~~~~~~~kp~p~~~~~~~~~l 161 (383)
+........++||+.++|+.|+++|++++++||++...+...+ ...++.++|+.... .++...+||+|.+|..+++++
T Consensus 119 ~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~ 197 (253)
T d1zs9a1 119 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADSI 197 (253)
T ss_dssp HHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHH
T ss_pred HHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHHh
Confidence 3334456788999999999999999999999999999888777 78888888775543 355667999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccc--cccccchhhcccccc
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL 214 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~--~~~~a~~vi~~l~e~ 214 (383)
|++|++|+||||+.+|+.+|+++||++++|.+...... ....++.+|++|.|+
T Consensus 198 ~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 198 GCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp TSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 99999999999999999999999999999976432222 234557788988874
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.90 E-value=4.7e-24 Score=189.98 Aligned_cols=110 Identities=22% Similarity=0.365 Sum_probs=100.0
Q ss_pred HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHc
Q 016755 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 82 ~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~l 161 (383)
.+...+....++|++.++|+.|+ ++.++++||++...+...+ ...++..+|+.++++++.+..||+|++|..+++++
T Consensus 84 ~l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~l 160 (245)
T d1qq5a_ 84 DMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVL 160 (245)
T ss_dssp HHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHH
T ss_pred HHHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHh
Confidence 34444556789999999999885 5789999999999888888 78899999999999999999999999999999999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
|++|++|++|||+.+|+.+|+++||++|+|++.
T Consensus 161 g~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~ 193 (245)
T d1qq5a_ 161 GVTPAEVLFVSSNGFDVGGAKNFGFSVARVARL 193 (245)
T ss_dssp CCCGGGEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred CCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 999999999999999999999999999999864
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=5.5e-21 Score=167.21 Aligned_cols=202 Identities=12% Similarity=0.074 Sum_probs=125.8
Q ss_pred CccEEEEecCCcccccHH-------HHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCH---HHHH
Q 016755 8 LMSCVILDLDGTLLNTDG-------MFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAK---HEFV 76 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~-------~~~~a~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~ 76 (383)
++++|+||+||||+|+.. .+.+.+.+.+.+.+........ ..............+.......... ..+.
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 81 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 689999999999999742 2234444444444433333222 2233333333333332222221111 1111
Q ss_pred HHH-HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHH----------HhhcCCcccCcEEEeCCCCC
Q 016755 77 NEV-YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI----------SYQHGWNESFSVIVGSDEVR 145 (383)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l----------~~~~gl~~~f~~i~~~~~~~ 145 (383)
... ...+........+++++.+++. .+..+++.++.......... ...+|+..+|+.+++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~- 156 (225)
T d2g80a1 82 GYVWAHGYESGQIKAPVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS- 156 (225)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH-
T ss_pred HHHHHHHHHhhcccccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc-
Confidence 111 1122222234556777777665 34667888887765443322 1456888999999888654
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
..||+|++|..+++++|++|++|++|||+.+|+.+|+++||++++|.+..........+..+|+++.|+
T Consensus 157 ~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 157 GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred CCCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 479999999999999999999999999999999999999999999986433322223445567777653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=2.2e-22 Score=176.35 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=95.1
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCCh----HHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~----~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg 162 (383)
.....++|++.++|..|+++|++++++|++.. ......+ ...++.++|+.++++++++.+||+|++|+.++++++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 34678999999999999999999999998532 2333334 567899999999999999999999999999999999
Q ss_pred CCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 163 ~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
++|++|+||||+.+|+.+|+++|+.+++|.++
T Consensus 172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~ 203 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203 (222)
T ss_dssp SCTTSEEEEESSSTTTHHHHHHTCEEEECCSS
T ss_pred CCcceEEEEECCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999764
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.2e-21 Score=170.96 Aligned_cols=107 Identities=18% Similarity=0.201 Sum_probs=93.5
Q ss_pred hccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHH---HHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~---~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
.....++|++.++|..|+++|++++++||........ ......++..+|+.++++++.+.+||+|++|+.+++++|+
T Consensus 95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~ 174 (225)
T d1zd3a1 95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 174 (225)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence 3456799999999999999999999999975443221 1214556788999999999999999999999999999999
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
+|++|++|||+..|+.+|+++|+++++|.+
T Consensus 175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 175 SPSEVVFLDDIGANLKPARDLGMVTILVQD 204 (225)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred CccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999976
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=4e-21 Score=163.79 Aligned_cols=174 Identities=16% Similarity=0.185 Sum_probs=124.4
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhc------------CCCHHHHHHHHHHHhCCCCCHHHHHHH
Q 016755 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GKTPLEEAAIIVEDYGLPCAKHEFVNE 78 (383)
Q Consensus 11 ~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (383)
++|||+||||+|+... ..+.......+... ....... ..........+......+.........
T Consensus 2 l~iFDlDgtL~d~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
T d2b0ca1 2 LYIFDLGNVIVDIDFN--RVLGAWSDLTRIPL--ASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHG 77 (197)
T ss_dssp EEEECCBTTTEEEETH--HHHHHHHHHHCCCH--HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred EEEEeCCCCcCcCHHH--HHHHHHHHHhCCCH--HHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHHH
Confidence 5789999999997432 22333333334332 1211111 123334444444444444333222111
Q ss_pred HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHH
Q 016755 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~ 158 (383)
.. .....+.+++.+++..++.+|+.++++||++.......+....++..+|+.++++++.+.+||+|++++.++
T Consensus 78 ----~~--~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~ 151 (197)
T d2b0ca1 78 ----WQ--AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVL 151 (197)
T ss_dssp ----HH--TCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHH
T ss_pred ----HH--HhccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHH
Confidence 11 123468899999999999999999999999877666566333478889999999999999999999999999
Q ss_pred HHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 159 ~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+++|++|++|++|||+.+|+++|+++|+++++|++.
T Consensus 152 ~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 152 QAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999999999999999999999774
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=8.2e-21 Score=159.07 Aligned_cols=103 Identities=13% Similarity=0.129 Sum_probs=90.8
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~ 168 (383)
...++||+.++|+.|+++|++++++|+++...+...+.+.+++..+|..+..+ .||+|+.+..+++++|++|++|
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~ 118 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-----PGSKVTHFERLHHKTGVPFSQM 118 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-----SSCHHHHHHHHHHHHCCCGGGE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-----cCCChHHHHHHHHHhCCChHHE
Confidence 46899999999999999999999999887755444333788998888887653 5899999999999999999999
Q ss_pred EEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 169 l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
++|||+..|+++|+++|+.++.|+++..
T Consensus 119 l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 119 VFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999998753
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.9e-19 Score=149.73 Aligned_cols=106 Identities=16% Similarity=0.179 Sum_probs=80.4
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcc---cCcEEEeCCCCCCCCCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNE---SFSVIVGSDEVRTGKPS 150 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~---~f~~i~~~~~~~~~kp~ 150 (383)
.+.++||+.++|+.|+++|++++++||.+. ..+...+ ...|+.. +|...+..+++...||+
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~i~~~~~~~~~~~~~~KP~ 106 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQFDEVLICPHLPADECDCRKPK 106 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHH-HHTTCCEEEEEEECCCGGGCCSSSTTS
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhc-cccccccceeeeccccccccccccccc
Confidence 467899999999999999999999999751 1222333 3344422 22222344566788999
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCC
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~ 195 (383)
|+++..+++++|++|++|+||||+..|+++|+++|++++++.+..
T Consensus 107 p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 107 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp SGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred cHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 999999999999999999999999999999999999999998753
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=5e-18 Score=144.30 Aligned_cols=125 Identities=22% Similarity=0.262 Sum_probs=92.7
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChH---------------HHHHHHHhhcCCcccCcEEEeC-----------C
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGS-----------D 142 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~---------------~i~~~l~~~~gl~~~f~~i~~~-----------~ 142 (383)
.++++||+.++|+.|+++|++++++||.+.- ++...+ ...+.. .....+|. .
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~cp~~p~~~~~~~~~ 102 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD-LDGIYYCPHHPQGSVEEFRQ 102 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC-CSEEEEECCBTTCSSGGGBS
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhh-hhhccc-ccceeecccccccccccccc
Confidence 4579999999999999999999999998631 111122 122221 11233332 3
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE-EEecCCCCcccc-ccccchhhccccccC
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLR 215 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~-i~v~~~~~~~~~-~~~a~~vi~~l~e~~ 215 (383)
+...+||+|+++..+++++++++++++||||+.+|+++|++||+.+ +++..+...... ...|++++.++.++.
T Consensus 103 ~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~ 177 (182)
T d2gmwa1 103 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP 177 (182)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHH
T ss_pred cccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHH
Confidence 4557899999999999999999999999999999999999999964 667766543322 345789999998853
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=6.3e-19 Score=154.68 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=83.2
Q ss_pred ccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE---EEeCC----------CCCCCCCChHHH
Q 016755 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV---IVGSD----------EVRTGKPSPDIF 154 (383)
Q Consensus 88 ~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~---i~~~~----------~~~~~kp~p~~~ 154 (383)
...+++||+.++++.|+++|++++++|++....++..+ +++++.++|.. .+..+ ....+++++..+
T Consensus 72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK 150 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence 35679999999999999999999999999999999998 77887765522 11111 122457788899
Q ss_pred HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE
Q 016755 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 155 ~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~ 188 (383)
..+++++++++++|+||||+.+|+.||++||+..
T Consensus 151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 9999999999999999999999999999999854
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.70 E-value=5.3e-17 Score=140.59 Aligned_cols=105 Identities=21% Similarity=0.345 Sum_probs=81.3
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcccCcEEEeC------------
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS------------ 141 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~---------------~~i~~~l~~~~gl~~~f~~i~~~------------ 141 (383)
..+++||+.++|+.|+++|++++++||.+. ..+...+ ...|+ +++.++..
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~--~~~~~~~~~~~~~~~~~~~~ 122 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGV--FVDMVLACAYHEAGVGPLAI 122 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTC--CCSEEEEECCCTTCCSTTCC
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhccc--ccceEEEecccccccccccc
Confidence 357899999999999999999999999541 1122223 23332 22444332
Q ss_pred CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCC
Q 016755 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (383)
Q Consensus 142 ~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~ 196 (383)
.+..+.||+|.++..+++++++++++|+||||+.+|+++|++||+.++++..+..
T Consensus 123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~ 177 (209)
T d2o2xa1 123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEA 177 (209)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCC
T ss_pred cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCC
Confidence 2334569999999999999999999999999999999999999999999877654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=4.5e-17 Score=142.24 Aligned_cols=188 Identities=13% Similarity=0.101 Sum_probs=112.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh-hh-cC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (383)
..++|+|||||||++.+ .+..++...|..-....+. .. .| ....+.+...+..+.. ...+..+ ...
T Consensus 9 ~~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~----~~~ 77 (217)
T d1nnla_ 9 SADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SREQVQR----LIA 77 (217)
T ss_dssp HCSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHHHHHH----HHH
T ss_pred CCCEEEEcCccccCCcc-----HHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhccc--chHHHHH----HHH
Confidence 46899999999999985 3445555666543222111 11 11 1222332222222211 1122111 111
Q ss_pred hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEe------------CCCCC----CCC
Q 016755 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG------------SDEVR----TGK 148 (383)
Q Consensus 85 ~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~------------~~~~~----~~k 148 (383)
+ ....++||+.++++.|+++|++++++|++...+++..+ +.+|+..+ .+++ +.... .+.
T Consensus 78 ~--~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~-~~lgi~~~--~v~an~~~~~~~G~~~g~~~~~p~~~~~ 152 (217)
T d1nnla_ 78 E--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPAT--NVFANRLKFYFNGEYAGFDETQPTAESG 152 (217)
T ss_dssp H--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGG--GEEEECEEECTTSCEEEECTTSGGGSTT
T ss_pred h--hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHH-HHhCCccc--ceeeeeeeeeehhccccceeeeeeeccc
Confidence 1 34678999999999999999999999999999999888 88888642 1111 11111 122
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccccc
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e~ 214 (383)
.+...++.++++ .++++|++||||.+|+.|++.+|+.+++ ............++.++.++.++
T Consensus 153 ~K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va~-~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 153 GKGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAFIGF-GGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp HHHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEEE-CSSCCCHHHHHHCSEEESCGGGG
T ss_pred hHHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCceEEE-CCCHHHHHHHHhCCCEeCCHHHh
Confidence 244555555444 5678999999999999999999987544 32112122234567778887774
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=5e-18 Score=151.69 Aligned_cols=79 Identities=23% Similarity=0.345 Sum_probs=65.3
Q ss_pred EEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccccc----cccchhhccc
Q 016755 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSL 211 (383)
Q Consensus 137 ~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~~----~~a~~vi~~l 211 (383)
.....+....+||+|.++..+++++|++|++|+||||++ +|+.+|+++||.+++|.+|....... ..|+++++++
T Consensus 165 ~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl 244 (250)
T d2c4na1 165 KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSV 244 (250)
T ss_dssp HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSG
T ss_pred HhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCH
Confidence 333445566889999999999999999999999999998 59999999999999998875443331 2468999999
Q ss_pred cccC
Q 016755 212 LDLR 215 (383)
Q Consensus 212 ~e~~ 215 (383)
.|++
T Consensus 245 ~eL~ 248 (250)
T d2c4na1 245 AEID 248 (250)
T ss_dssp GGCC
T ss_pred HHhC
Confidence 9865
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.66 E-value=5.9e-17 Score=139.41 Aligned_cols=186 Identities=17% Similarity=0.150 Sum_probs=121.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhh---hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016755 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH---KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (383)
++.|+|+|||||||+|++ ++..+++..|......... .................. ..... ...
T Consensus 2 ~kkKlv~FDlDGTL~d~e-----s~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~ 67 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNE-----TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDLPI--------EKV 67 (210)
T ss_dssp CCCCEEEECCCCCCBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTCBH--------HHH
T ss_pred CCCeEEEEeCCCCcCCch-----HHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHH-hhhHH--------HHH
Confidence 467999999999999985 3455566665432111110 011111111111111111 11000 112
Q ss_pred HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC----------CCCCCCCChHH
Q 016755 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRTGKPSPDI 153 (383)
Q Consensus 84 ~~~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~----------~~~~~kp~p~~ 153 (383)
........+.+++.+.++.+..+|..+.++|+.....+.... ...+...++......+ ....+++++..
T Consensus 68 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (210)
T d1j97a_ 68 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 146 (210)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHhhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccch
Confidence 222345788999999999999999999999999888887777 5566655554444332 23356778899
Q ss_pred HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 154 ~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
+...+++++++++++++|||+.||+.|++.+|+.+++ +. .+.....|+.++++-
T Consensus 147 ~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na---~~~lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 147 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CA---KPILKEKADICIEKR 200 (210)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SC---CHHHHTTCSEEECSS
T ss_pred hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CC---CHHHHHhCCEEEcCC
Confidence 9999999999999999999999999999999998765 22 233344668888754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.65 E-value=1.4e-17 Score=148.95 Aligned_cols=75 Identities=20% Similarity=0.306 Sum_probs=62.5
Q ss_pred CCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChh-hhHHHHhcCCEEEEecCCCCcccc----ccccchhhccccccC
Q 016755 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR 215 (383)
Q Consensus 141 ~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~-Di~~a~~aG~~~i~v~~~~~~~~~----~~~a~~vi~~l~e~~ 215 (383)
......|||+|.++..+++++|++|++|+||||++. |+.+|+++||.+++|.+|...... ...|+++++++.|++
T Consensus 173 ~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 173 VKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp CCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred ceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 344456899999999999999999999999999984 999999999999999887543322 234689999998864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.61 E-value=5.5e-16 Score=138.36 Aligned_cols=77 Identities=22% Similarity=0.271 Sum_probs=64.0
Q ss_pred EEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCccc----cccccchhhcccc
Q 016755 138 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVINSLL 212 (383)
Q Consensus 138 i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~----~~~~a~~vi~~l~ 212 (383)
+..+.....+||+|.++..+++++|++|++|+||||++ +|+++|+++|+.+++|.+|..... ....|+++++++.
T Consensus 170 ~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~ 249 (253)
T d1yv9a1 170 ATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLD 249 (253)
T ss_dssp HHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGG
T ss_pred cccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHH
Confidence 34455566899999999999999999999999999997 599999999999999987643322 1335789999998
Q ss_pred cc
Q 016755 213 DL 214 (383)
Q Consensus 213 e~ 214 (383)
|+
T Consensus 250 e~ 251 (253)
T d1yv9a1 250 EW 251 (253)
T ss_dssp GC
T ss_pred Hc
Confidence 85
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.58 E-value=1.1e-15 Score=137.05 Aligned_cols=73 Identities=22% Similarity=0.307 Sum_probs=61.9
Q ss_pred CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCEEEEecCCCCcccc----ccccchhhccccccC
Q 016755 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR 215 (383)
Q Consensus 143 ~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~~aG~~~i~v~~~~~~~~~----~~~a~~vi~~l~e~~ 215 (383)
+...+||+|.++..+++++|++|++|+||||++ +|+.+|+++|+.+++|.+|...... ...|+++++++.|+.
T Consensus 180 ~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~ 257 (261)
T d1vjra_ 180 DLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELA 257 (261)
T ss_dssp SEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHH
T ss_pred ccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHH
Confidence 345789999999999999999999999999997 6999999999999999887544322 224689999998853
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.49 E-value=4.9e-14 Score=114.89 Aligned_cols=105 Identities=14% Similarity=0.026 Sum_probs=75.6
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHh----hcC-CcccCcEEEeCCCCCCCCCChHHHHHHHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISY----QHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~---i~~~l~~----~~g-l~~~f~~i~~~~~~~~~kp~p~~~~~~~~~ 160 (383)
...++||+.++|+.|+++|+.++++||.+... +...+.. ... ....++......+ ...+|+.......+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~k~~~l~~ 112 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQ-GDTRKDDVVKEEIFWK 112 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCT-TCCSCHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccc-cccCCchHHHHHHHHH
Confidence 45789999999999999999999999986422 2222211 001 1122344443333 3456777788888888
Q ss_pred cCCCCCc-EEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 161 LNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 161 lg~~p~e-~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
+..++.+ +++|||++.|+++|+++|++++.|.+|
T Consensus 113 ~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 113 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred hccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 8777666 567899999999999999999999886
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.45 E-value=5.2e-14 Score=132.77 Aligned_cols=126 Identities=19% Similarity=0.255 Sum_probs=105.1
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcE--EEeCCC-----------CCCCCCChHHHHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSDE-----------VRTGKPSPDIFLEA 157 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~--i~~~~~-----------~~~~kp~p~~~~~~ 157 (383)
+|.||+.++|+.|+++|++++++|+.+...+...+ +.+|+.++|+. ++++++ ...+||+|+.+..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 35679999999999999999999999999999888 88999999864 565543 35789999999998
Q ss_pred HHHc--------------CCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCcccc-----ccccchhhccccccCcc
Q 016755 158 AKRL--------------NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-----YTAADEVINSLLDLRPE 217 (383)
Q Consensus 158 ~~~l--------------g~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~-----~~~a~~vi~~l~e~~~~ 217 (383)
+..+ +..+++|+||||+.+|+.+|+++|+++|+|.+|...... ...|+++++++.++...
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~i 372 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGV 372 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHH
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHH
Confidence 8654 567889999999999999999999999999987543221 23689999999986544
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.38 E-value=1.6e-12 Score=110.76 Aligned_cols=162 Identities=17% Similarity=0.143 Sum_probs=103.8
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHH---HHHHhCCCCCHHHHHHHHHHHHHh
Q 016755 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI---IVEDYGLPCAKHEFVNEVYSMFSD 85 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 85 (383)
||+|+|||||||++. .|.++++..|........+... ...+.+.. ++...+.. . ..+..
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~~tgR~~~--~~~~~~~~~v~ll~~~~~~--~--------~~~~~ 63 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALKATTRDIP--DYDVLMKQRLRILDEHGLK--L--------GDIQE 63 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGGGCCTTTCC--CHHHHHHHHHHHHHHTTCC--H--------HHHHH
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHHHHHCCCCC--CHHHHHHHHHHHHHhCCCc--e--------ehhhh
Confidence 589999999999985 4566677778643221111110 12222211 11111111 1 11222
Q ss_pred hhccCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCC----CCCCCCChHHHHHHHHHc
Q 016755 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRL 161 (383)
Q Consensus 86 ~~~~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~----~~~~kp~p~~~~~~~~~l 161 (383)
........++.......++ .++..+++|.+......... ..++....+........ .....+++......++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (206)
T d1rkua_ 64 VIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAF 141 (206)
T ss_dssp HHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHH
T ss_pred hhhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHHHHh
Confidence 2345678888888887775 67889999998887777766 55665544332222111 112345566778889999
Q ss_pred CCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 162 g~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
++++++|++|||+.||++|.+.||..+++
T Consensus 142 ~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm 170 (206)
T d1rkua_ 142 KSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp HHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred cccccceEEecCCccCHHHHHhCCccEEE
Confidence 99999999999999999999999998877
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=1.3e-10 Score=100.36 Aligned_cols=63 Identities=17% Similarity=0.094 Sum_probs=49.0
Q ss_pred CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcc
Q 016755 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (383)
Q Consensus 145 ~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~ 210 (383)
..+.+++.+++.+++++|++++++++|||+.||+.|++.+|+.+++ . +..+.....|+.+.++
T Consensus 148 ~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav-~--na~~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 148 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-A--QAPKILKENADYVTKK 210 (230)
T ss_dssp CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-T--TSCHHHHTTCSEECSS
T ss_pred eCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE-C--CCCHHHHHhCCEEECC
Confidence 3567889999999999999999999999999999999999986543 2 2233333455666544
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.09 E-value=1.2e-10 Score=100.97 Aligned_cols=44 Identities=16% Similarity=0.042 Sum_probs=39.2
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
+..+..+++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav 192 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP 192 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE
Confidence 44568899999999999999999999999999999999986543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=9.7e-10 Score=97.57 Aligned_cols=60 Identities=18% Similarity=0.087 Sum_probs=45.4
Q ss_pred CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 149 p~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.|..+++.++++++++++++++|||+.||+.|.+.+|..+++- +..+.....++++..+.
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~---na~~~lk~~a~~i~~~~ 256 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD---NAIPSVKEVANFVTKSN 256 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT---TSCHHHHHHCSEECCCT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC---CCCHHHHHhCCEEcCCC
Confidence 4678999999999999999999999999999999999866442 23333333445555443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.94 E-value=1.9e-09 Score=96.38 Aligned_cols=62 Identities=21% Similarity=0.128 Sum_probs=47.3
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 148 kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
-.|..+++.+++++|++++++++|||+.||+.|.+.+|..+++- + ..+.....|+++.++..
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-n--a~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-N--AREDIKSIADAVTLTND 273 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-T--CCHHHHHHCSEECCCGG
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-C--CCHHHHHhCCEEcCCCC
Confidence 35788999999999999999999999999999999999866433 2 22333345566665544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.83 E-value=8.3e-09 Score=86.89 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=68.0
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHhhcCCc--ccCcEEEeCCCCCCCCCChHHHHHHHHHcCC
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~---~i~~~l~~~~gl~--~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~ 163 (383)
...+.||+.++++.++++|+++.++||.... .+...|.+.+|+. ..-+.++.+.+ ..|.. -+..++++++
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I 158 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI 158 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe
Confidence 3568899999999999999999999997643 3444453446763 22234444433 12222 2333456666
Q ss_pred CCCcEEEEecChhhhHHHHhcCCEEEEecC
Q 016755 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 164 ~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~ 193 (383)
++++||..+|+.+|+++|++.+-+-+
T Consensus 159 ----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 159 ----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp ----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred ----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 89999999999999999999998865
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.77 E-value=8.9e-09 Score=91.22 Aligned_cols=65 Identities=17% Similarity=0.094 Sum_probs=49.7
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.+-.|..+++.+++++|++++++++|||+.||+.|.+.+|..+++ . +..+.....|++++.+..+
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~--na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-E--NAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-T--TSCHHHHHHCSEECCCTTT
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-C--CCCHHHHHhCCEEcCCCCc
Confidence 455678999999999999999999999999999999999986533 2 3333344455666655543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=8.5e-08 Score=84.56 Aligned_cols=64 Identities=16% Similarity=0.043 Sum_probs=48.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhcccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~ 212 (383)
.+-.|..+++.+++++|++++++++|||+.||+.|.+.+|..+++-+ ..+.....|+++..+..
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~N---a~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGN---AAENIKQIARYATDDNN 250 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTT---CCHHHHHHCSEECCCGG
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCC---CCHHHHHhCCEEcCCCC
Confidence 34457889999999999999999999999999999999999766432 23333344555655543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.60 E-value=2.4e-07 Score=82.56 Aligned_cols=97 Identities=20% Similarity=0.188 Sum_probs=66.8
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeC-----CC-C--CCCCC------ChHHH
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-----DE-V--RTGKP------SPDIF 154 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~-----~~-~--~~~kp------~p~~~ 154 (383)
.+.+.||+.++++.|+++|++++++|++-..+++..+ +.+|+...--.|++- ++ . ++..| +....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl-~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-HHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 5789999999999999999999999999999999998 777764311133331 11 1 01111 12333
Q ss_pred HHHHH--HcCCCCCcEEEEecChhhhHHHHhcCC
Q 016755 155 LEAAK--RLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 155 ~~~~~--~lg~~p~e~l~VGDs~~Di~~a~~aG~ 186 (383)
..... +..-+..+++++|||.+|+.||..+..
T Consensus 212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence 33333 233356889999999999999987643
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=1.3e-07 Score=80.97 Aligned_cols=43 Identities=9% Similarity=-0.029 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 147 GKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 147 ~kp~p~~~~~~~~---~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
+..+....+.+++ ++|++++++++|||+.||+.|.+.+|..++
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 3445556555554 679999999999999999999999998554
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.53 E-value=1.4e-07 Score=78.95 Aligned_cols=95 Identities=16% Similarity=0.296 Sum_probs=75.9
Q ss_pred CCchHHHHHHHHHHCCCCEEEEeCCC--------hHH----HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 92 ALPGANRLIKHLSCHGVPMALASNSH--------RAT----IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 92 ~~pg~~~lL~~L~~~G~~~~i~s~~~--------~~~----i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
++|++.+.|+.|.+.|+.++++||.+ .+. +...+ +.++.. +...++..+..++||.|.++..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~-~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH-HHcCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 46999999999999999999999963 222 22223 455543 3566777777899999999999999
Q ss_pred HcC----CCCCcEEEEecCh-----------------hhhHHHHhcCCEEE
Q 016755 160 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVV 189 (383)
Q Consensus 160 ~lg----~~p~e~l~VGDs~-----------------~Di~~a~~aG~~~i 189 (383)
+++ ++.++++||||.. .|+..|.++|++..
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 875 8889999999953 89999999999864
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=7.1e-07 Score=74.89 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=68.1
Q ss_pred hccCCCCchHHHHHHHHHHCC-CCEEEEeCCChHH------HHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHH
Q 016755 87 LCKVKALPGANRLIKHLSCHG-VPMALASNSHRAT------IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (383)
Q Consensus 87 ~~~~~~~pg~~~lL~~L~~~G-~~~~i~s~~~~~~------i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~ 159 (383)
+..++|+||+.++++.|++.| +.+.++|..+... -...|.++++-......+++++ |.
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----K~---------- 134 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----KT---------- 134 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----ST----------
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----cc----------
Confidence 467899999999999999865 4577777765321 1234534444333323444432 21
Q ss_pred HcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccccc
Q 016755 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (383)
Q Consensus 160 ~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l~e 213 (383)
.+. --++|.|++..+..+.++|..+++++..+.........-.++.++.|
T Consensus 135 ~~~----~d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e 184 (195)
T d1q92a_ 135 VVS----ADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWAD 184 (195)
T ss_dssp TSC----CSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTS
T ss_pred eec----CeEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHH
Confidence 111 12899999999999999999999998755443222222355666665
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.48 E-value=9.3e-09 Score=90.72 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=47.4
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCCCCccccccccchhhccc
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~~~~~~~~~~a~~vi~~l 211 (383)
.+-.|..+++.+++++|++++++++|||+.||+.|.+.+|..++ +.. ..+.....|+++..+-
T Consensus 183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sva-v~n--a~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVA-MGQ--AKEDVKAAADYVTAPI 245 (260)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTT--SCHHHHHHSSEECCCG
T ss_pred CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEE-eCC--CCHHHHHhCCEEeCCC
Confidence 44567889999999999999999999999999999999999653 333 2233333445555443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.44 E-value=6e-07 Score=77.32 Aligned_cols=47 Identities=6% Similarity=-0.108 Sum_probs=40.3
Q ss_pred CCCCChHHHHHHHHHcC-CCCCcEEEEecChhhhHHHHhcCCEEEEec
Q 016755 146 TGKPSPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg-~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~ 192 (383)
.+-.+..++..++++++ ++++++++|||+.||++|.+.+|..+++-+
T Consensus 176 ~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~N 223 (243)
T d1wzca1 176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223 (243)
T ss_dssp CSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESS
T ss_pred hhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCC
Confidence 45567888999999985 889999999999999999999998776643
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.42 E-value=1.5e-07 Score=83.19 Aligned_cols=44 Identities=14% Similarity=0.043 Sum_probs=40.0
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i 189 (383)
.+..+...+..+++.++++++++++|||+.||+.|.+.+|..++
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va 247 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA 247 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE
Confidence 45667899999999999999999999999999999999998654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.40 E-value=1.4e-06 Score=75.32 Aligned_cols=45 Identities=22% Similarity=0.170 Sum_probs=39.7
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
.+..+..+++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 455578899999999999999999999999999999999975543
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.38 E-value=3.5e-06 Score=78.74 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=80.1
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCcccCcEEEeCCC-----------------C
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V 144 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~--------gl~~~f~~i~~~~~-----------------~ 144 (383)
+...|.+..+|..|++.|.++.++||++-.++...+.-.+ .|.++||.||+... .
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence 3356789999999999999999999999999887763334 68889999997631 0
Q ss_pred C-------CCCC---ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCEEEEecCC
Q 016755 145 R-------TGKP---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL 194 (383)
Q Consensus 145 ~-------~~kp---~p~~~~~~~~~lg~~p~e~l~VGDs~-~Di~~a~-~aG~~~i~v~~~ 194 (383)
+ .-+| .........+.+|+...++++|||+. .||..++ ..|++|+.|-+.
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 0 0011 12336667788899999999999999 7977764 679999988763
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.15 E-value=4.2e-06 Score=68.83 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=67.6
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 016755 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (383)
Q Consensus 99 lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di 178 (383)
.+..|++.|+.++++|......+.... ..+++ ..++. ..+++...+..+++++++++++|+||||..||+
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~-~~l~~----~~~~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRI-ADLGI----KLFFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTC----CEEEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHH-hhhcc----ccccc-----ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 367778899999999998888877777 55555 33332 245677889999999999999999999999999
Q ss_pred HHHHhcCCEEEEec
Q 016755 179 VAGKAAGMEVVAVP 192 (383)
Q Consensus 179 ~~a~~aG~~~i~v~ 192 (383)
++.+.+|+.+++-+
T Consensus 110 ~~l~~~g~siap~n 123 (177)
T d1k1ea_ 110 PAFAACGTSFAVAD 123 (177)
T ss_dssp HHHHHSSEEEECTT
T ss_pred HHHhhCCeEEEcCC
Confidence 99999999665443
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.87 E-value=4.5e-05 Score=59.43 Aligned_cols=88 Identities=13% Similarity=0.165 Sum_probs=68.2
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~ 170 (383)
++.|++.+.++.|++.|+++.++|+.........- +.+|+ +.+++. -.|+-.....+++... ..+.|
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia-~~lgI----~~v~~~-------~~p~~k~~~v~~~q~~-~~v~~ 87 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNL----DLVIAE-------VLPHQKSEEVKKLQAK-EVVAF 87 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTC----SEEECS-------CCHHHHHHHHHHHTTT-SCEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHH-hhhhh----hhhccc-------cchhHHHHHHHHHHcC-CEEEE
Confidence 47789999999999999999999998888777665 77887 444432 2345555556666543 67999
Q ss_pred EecChhhhHHHHhcCCEEEEe
Q 016755 171 IEDSVIGVVAGKAAGMEVVAV 191 (383)
Q Consensus 171 VGDs~~Di~~a~~aG~~~i~v 191 (383)
+||+.||..+.+.+++...+-
T Consensus 88 vGDg~nD~~aL~~Advgia~~ 108 (135)
T d2b8ea1 88 VGDGINDAPALAQADLGIAVG 108 (135)
T ss_dssp EECSSSSHHHHHHSSEEEEEC
T ss_pred EeCCCCcHHHHHhCCeeeecC
Confidence 999999999999999876543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.33 E-value=0.00025 Score=57.25 Aligned_cols=99 Identities=12% Similarity=0.023 Sum_probs=70.3
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccC----cEEEeCCCC----------------CCCCCC
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKPS 150 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f----~~i~~~~~~----------------~~~kp~ 150 (383)
++.|++.+.++.|++.|+++.++|+-........- +.+|+...- +..+.+.++ -+..-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHH-HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 56789999999999999999999998877766665 677774321 111221111 122334
Q ss_pred hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEE
Q 016755 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (383)
Q Consensus 151 p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~ 190 (383)
|+--..+.+.+.-....+.|+||+.||..+.+.|.+...+
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~ 138 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 138 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence 5555555555555567899999999999999999986655
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.13 E-value=0.00057 Score=51.94 Aligned_cols=49 Identities=10% Similarity=0.129 Sum_probs=36.6
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCcccCcEEEeC
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVGS 141 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~---------------~~~i~~~l~~~~gl~~~f~~i~~~ 141 (383)
..|.+++.+.+..|+++|+.+.+.|... .+.+...| +..|+ .++.++.+
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL-~~~gI--~Yd~Li~g 86 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWL-DKHQV--PYDEILVG 86 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHH-HHTTC--CCSEEEEC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHH-HHcCC--CceEEEEC
Confidence 4688999999999999999999999874 23355556 55666 24766654
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.75 E-value=0.0011 Score=50.32 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=28.5
Q ss_pred CCCchHHHHHHHHHHCCCCEEEEeCCChHHHHH
Q 016755 91 KALPGANRLIKHLSCHGVPMALASNSHRATIES 123 (383)
Q Consensus 91 ~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~ 123 (383)
.|.|++.+.|+.|+++|+.+.+.|..+......
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~ 53 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDE 53 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence 588999999999999999999999998765433
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.98 E-value=0.093 Score=43.65 Aligned_cols=89 Identities=17% Similarity=0.189 Sum_probs=63.1
Q ss_pred cCCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCC-C---CC-------------------
Q 016755 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VR------------------- 145 (383)
Q Consensus 89 ~~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~-~---~~------------------- 145 (383)
.+.+.||+.++++.+.+. .+-+++|.+...++++.. ++.|+. +. +.+.+ + ..
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~-~~~gfp--~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~ 153 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTA-SMIGVR--GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASL 153 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHH-HHTTCC--SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHH-hhcCCC--ce-eecccccccccCCChHHHHHHHHHhhhccCc
Confidence 578999999999999877 899999999999998777 777774 22 22211 0 00
Q ss_pred ---------------------------CC-CCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 016755 146 ---------------------------TG-KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (383)
Q Consensus 146 ---------------------------~~-kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~a 184 (383)
.| -.+..+.+..++..++++. ++||||.+|+++.+.+
T Consensus 154 ~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~ 218 (308)
T d1y8aa1 154 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAA 218 (308)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHH
T ss_pred cHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHH
Confidence 01 1123445556677777664 9999999999987665
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.0008 Score=56.52 Aligned_cols=44 Identities=9% Similarity=-0.154 Sum_probs=31.7
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCEEEEecC
Q 016755 147 GKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 147 ~kp~p~~~~~~~~~lg~~p~e~l~VGD----s~~Di~~a~~aG~~~i~v~~ 193 (383)
+-.|..+++.+ ++++++++++||| +.||++|.+.+|...+.+..
T Consensus 183 ~vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 183 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred ccCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 33344455544 4679999999999 66999999999976666644
|
| >d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Adenylyltransferase domain: FMN adenylyltransferase domain of bifunctional FAD synthetase species: Thermotoga maritima [TaxId: 2336]
Probab=95.63 E-value=0.0015 Score=51.93 Aligned_cols=79 Identities=19% Similarity=0.171 Sum_probs=53.4
Q ss_pred CCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEEEEecCC
Q 016755 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (383)
Q Consensus 115 ~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~i~v~~~ 194 (383)
.++++|++..+ . ++ +.+++|+|+.+|+.. ..|+...++.|..+..++..
T Consensus 79 ls~~~Fi~~~l-~--~~----~~ivvG~Df~FG~~r------------------------~G~~~~Lk~~g~~v~~i~~~ 127 (157)
T d1mrza2 79 LTPEGFVERYL-S--GV----SAVVVGRDFRFGKNA------------------------SGNASFLRKKGVEVYEIEDV 127 (157)
T ss_dssp CCHHHHHHHHC-T--TC----CEEEEETTCCBSGGG------------------------CBCHHHHHHTTCEEEEECCC
T ss_pred hhhhHHHHHHh-h--cC----cEEEEecCccccccc------------------------ccchhhhccceeEEEeeccE
Confidence 35677777665 2 33 789999999998732 22444556778888888775
Q ss_pred CCccccccccchhhccccccCccccCCCCCcccccCCCCCC
Q 016755 195 PKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE 235 (383)
Q Consensus 195 ~~~~~~~~~a~~vi~~l~e~~~~~~~l~~~~~~la~~llg~ 235 (383)
..+.... +++.+++.+.+++... |+++|||
T Consensus 128 ~~~~~~I-SST~IR~~l~~G~i~~----------A~~lLGR 157 (157)
T d1mrza2 128 VVQGKRV-SSSLIRNLVQEGRVEE----------IPAYLGR 157 (157)
T ss_dssp EETTEEC-CHHHHHHHHHTTCTTT----------THHHHSS
T ss_pred eeCCcEE-cHHHHHHHHHcCCHHH----------HHHhcCC
Confidence 4444444 4467777777777665 8888886
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.93 E-value=0.0063 Score=50.55 Aligned_cols=45 Identities=7% Similarity=-0.179 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecCh----hhhHHHHhcCCEEEEecC
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV----IGVVAGKAAGMEVVAVPS 193 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~----~Di~~a~~aG~~~i~v~~ 193 (383)
.+-.|..+++.+++ .+++++++|||+. ||++|.+.+|...+.|..
T Consensus 182 ~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 182 EGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred hhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 44556677877764 5899999999975 999999999976666544
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.82 E-value=0.011 Score=47.91 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccCcEEEeCCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 016755 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (383)
Q Consensus 90 ~~~~pg~~~lL~~L~~~G~~~~i~s~~~~~~i~~~l~~~~gl~~~f~~i~~~~~~~~~kp~p~~~~~~~~~lg~~p~e~l 169 (383)
+...||+.++|+.+.+. +.++|.|.+.+++++.++ +.+.-...+......+.+....+. +.+-++.+|-+.++++
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il-~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vv 128 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVL 128 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHH-HHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeE
Confidence 46789999999999987 999999999999999988 666655555666655544322221 1223567788889999
Q ss_pred EEecChhhhHHHHhcCC
Q 016755 170 VIEDSVIGVVAGKAAGM 186 (383)
Q Consensus 170 ~VGDs~~Di~~a~~aG~ 186 (383)
+|.|++.-...--.-|+
T Consensus 129 ivDd~~~~~~~~~~N~I 145 (181)
T d1ta0a_ 129 ILDNSPASYVFHPDNAV 145 (181)
T ss_dssp EECSCGGGGTTCGGGBC
T ss_pred EEcCChhhhhcCccCee
Confidence 99999976544333444
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.88 E-value=0.019 Score=47.20 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=29.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCEE
Q 016755 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (383)
Q Consensus 146 ~~kp~p~~~~~~~~~lg~~p~e~l~VGDs~~Di~~a~~aG~~~ 188 (383)
.+-.+..+++.+++ .+++++|||+.||+.|.+.+|..+
T Consensus 156 ~g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~ 193 (229)
T d1u02a_ 156 PGVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDAL 193 (229)
T ss_dssp TTCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSE
T ss_pred CCCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeE
Confidence 44556677777654 378999999999999999997654
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.45 E-value=0.07 Score=43.73 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=16.1
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHH
Q 016755 12 VILDLDGTLLNTDGMFSEVLKTFLVK 37 (383)
Q Consensus 12 viFDlDGTL~d~~~~~~~a~~~~~~~ 37 (383)
++|||||||++....+.....+++++
T Consensus 4 ~lFDlDGTLl~~~~~is~~~~~~i~~ 29 (244)
T d2fuea1 4 CLFDVDGTLTPARQKIDPEVAAFLQK 29 (244)
T ss_dssp EEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred EEEccccCccCCCCcCCHHHHHHHHH
Confidence 45899999998744333334444433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.37 E-value=0.072 Score=43.73 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=21.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHc
Q 016755 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY 38 (383)
Q Consensus 8 ~ik~viFDlDGTL~d~~~~~~~a~~~~~~~~ 38 (383)
..|+++||+||||++....+.+...++++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l 32 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKL 32 (243)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHH
Confidence 5789999999999987544444444444443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.97 E-value=0.15 Score=41.38 Aligned_cols=12 Identities=50% Similarity=0.833 Sum_probs=11.0
Q ss_pred EEEEecCCcccc
Q 016755 11 CVILDLDGTLLN 22 (383)
Q Consensus 11 ~viFDlDGTL~d 22 (383)
+|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 689999999996
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=86.79 E-value=0.12 Score=41.19 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=15.3
Q ss_pred CCccEEEEecCCccccc
Q 016755 7 KLMSCVILDLDGTLLNT 23 (383)
Q Consensus 7 ~~ik~viFDlDGTL~d~ 23 (383)
..+|+++||+||||+|.
T Consensus 3 ~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGCCEEEEECTTTTSCS
T ss_pred ccCeEEEEccCCcccCC
Confidence 46899999999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=84.14 E-value=0.35 Score=43.28 Aligned_cols=21 Identities=29% Similarity=0.643 Sum_probs=17.7
Q ss_pred ccEEEEecCCcccccHHHHHH
Q 016755 9 MSCVILDLDGTLLNTDGMFSE 29 (383)
Q Consensus 9 ik~viFDlDGTL~d~~~~~~~ 29 (383)
||.|+||+||+|++....+..
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~ 21 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDV 21 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHH
T ss_pred CceEEEeCCcEEEcceeecch
Confidence 578999999999999776654
|