Citrus Sinensis ID: 016761

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
Protein Sequence
MSRRQRAVTAAAAGRGRDSFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSLHYNSTRMSL
Secondary Structure (PSIPRED)
cccccccHHHHHccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEcEEEEEEcccccccccccEEEEccccccccccccccccEEEEEEEEcHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEEccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHccccHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEEcHHHcccccHHHHHHHHHHcccccHHHHccEEEEEEcHHHHHHHHHHcccEEEEccccccccHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEccccccccccccEEEEEcccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHccEEEEEEcccHccccccccccHHHEEEEEcHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccHHHcccccccccc
Coil and Loop (DISEMBL)
MSRRQRAVTAAaagrgrdsfgFANMMHQVLTESAARPRALFSVASILLTCILVYGVadtlrflplsnsfssfpsifpssaldndslqvseENRLETVLNNAAMQDRTVILTTLneawaapdSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALItdgvdfhqeayfmtPQYLKMMWKRIDFLRTVLEMGynfiftdadimwfrdpfprfypdadfqvacdhflgspddvqnrpnggfnhvksnnrsiEFYRFWYasretypgyhdqdvlniikfdpsimDIGLKIKFLDtayfgglcepsedfNVVCTMHAnccyglnsKLIDLRIMLQDWKYFLSlpltlkksamfswtvpencsldslhynstrmsl
Flexible Loop (DISEMBL)
msrrqravtaaaagrgrdsfgFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGfnhvksnnrsIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPencsldslhynstrmsl
Low Complexity Region (SEG)
MSrrqravtaaaagrgrDSFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTlrflplsnsfssfpsifpssalDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSLHYNSTRMSL
Disordered region (IsUnstruct)
*******************FGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSI*******************ETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGS***********FNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL*********
Disordered Region (DISOPRED)
**************************************ALFSVASILLTCILVYGVADTLRF********************************ETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSL***********WTVPENCSLD***********
Disordered Region (DISEMBL)
**************RGRDSFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSLHYNSTRMSL
Disordered Region (DISPRO)
****************R*SFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPL************************EENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPL*****AMFSWTVPE*C*L************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRRQRAVTAAAAGRGRDSFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSLHYNSTRMSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	383	2.2.26 [Sep-21-2011]
P0C042	367	Uncharacterized protein A	no	no	0.780	0.814	0.482	2e-82
Q3E6Y3	329	Uncharacterized protein A	no	no	0.637	0.741	0.399	3e-50
Q54RP0	648	UDP-galactose:fucoside al	yes	no	0.161	0.095	0.380	0.0002

>sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970 OS=Arabidopsis thaliana GN=At4g15970 PE=2 SV=1

 Score =  306 bits (783), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/309 (48%), Positives = 197/309 (63%), Gaps = 10/309 (3%)

Query: 76  FPSSALDNDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGD 135
            P+  L   +    +  +L  +L  AA +D+TVI+TTLN+AW+ P+S  DLFL SF +G 
Sbjct: 24  LPNWCLSTTTHHQEDLKKLGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGK 83

Query: 136 GTRKLLNHLVIIALDQKAFERCLTLHRH-CFALITDGVDFHQEAYFMTPQYLKMMWKRID 194
           GT+ LL HLV+  LD++A+ RC  +H H C+ + T G+DF  +  FMTP YLKMMW+RI+
Sbjct: 84  GTKPLLRHLVVACLDEEAYSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIE 143

Query: 195 FLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHV 254
           FL T+L++ YNFIFT         PFPR   + DFQ+ACD + G   D+ N  NGGF  V
Sbjct: 144 FLGTLLKLRYNFIFTI--------PFPRLSKEVDFQIACDRYSGDDKDIHNAVNGGFAFV 195

Query: 255 KSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPS 314
           K+N R+I+FY +WY SR  YP  HDQDVL+ IK       IGLK++FLDT YFGG CEPS
Sbjct: 196 KANQRTIDFYNYWYMSRLRYPDRHDQDVLDQIKGGGYPAKIGLKMRFLDTKYFGGFCEPS 255

Query: 315 EDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL 374
            D + VCTMHANCC GL +K+ DLR ++ DW+ ++S   T     M +W  PENC     
Sbjct: 256 RDLDKVCTMHANCCVGLENKIKDLRQVIVDWENYVSAAKTTDGQIM-TWRDPENCMKQWW 314

Query: 375 HYNSTRMSL 383
             N T+  L
Sbjct: 315 WRNKTKQVL 323

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6Y3|Y1869_ARATH Uncharacterized protein At1g28695 OS=Arabidopsis thaliana GN=At1g28695 PE=2 SV=1

 Score =  199 bits (505), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/253 (39%), Positives = 147/253 (58%), Gaps = 9/253 (3%)

Query: 101 AAMQDRTVILTTLNEAWAAP----DSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFER 156
           AA  ++TVI+T +N+A+        +++DLFLESF  G+GT  LL+HL+++A+DQ A++R
Sbjct: 53  AAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVAVDQTAYDR 112

Query: 157 CLTLHRHCFALIT-DGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMW 215
           C     HC+ + T DGVD   E  FM+  +++MMW+R   +  VL  GYN IFTD D+MW
Sbjct: 113 CRFKRLHCYKMETEDGVDLEGEKVFMSKDFIEMMWRRTRLILDVLRRGYNVIFTDTDVMW 172

Query: 216 FRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP 275
            R P  R     D Q++ D        +    N GF HV+SNN++I  ++ WY  R    
Sbjct: 173 LRSPLSRLNMSLDMQISVDRINVGGQLI----NTGFYHVRSNNKTISLFQKWYDMRLNST 228

Query: 276 GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKL 335
           G  +QDVL  +        +GL + FL T  F G C+ S    VV T+HANCC  + +K+
Sbjct: 229 GMKEQDVLKNLLDSGFFNQLGLNVGFLSTTEFSGFCQDSPHMGVVTTVHANCCLHIPAKV 288

Query: 336 IDLRIMLQDWKYF 348
            DL  +L+DWK +
Sbjct: 289 FDLTRVLRDWKRY 301

Arabidopsis thaliana (taxid: 3702)

>sp|Q54RP0|AGTA_DICDI UDP-galactose:fucoside alpha-3-galactosyltransferase OS=Dictyostelium discoideum GN=agtA PE=1 SV=1

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 9/71 (12%)

Query: 199 VLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVA------CDHFLGSPDDVQNRPNGGFN 252
           VL+ GYN ++TD DI+W RDPF  FY D + +         D ++   DD       GF 
Sbjct: 121 VLKKGYNVLWTDTDIVWKRDPFIHFYQDINQENQFTNDDDIDLYVQQDDD---DICAGFY 177

Query: 253 HVKSNNRSIEF 263
            ++SN R+I+F
Sbjct: 178 FIRSNQRTIKF 188

Specifically catalyzes the transfer of a galactosyl residue to the hydroxyproline-linked saccharide on Skp1 protein (fpaA/fpaB). Catalyzes the formation of a Gal-alpha-1,3-Fuc linkage, leading to Gal-Fuc-Gal-GlcNAc-HyPro143-Skp1.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
224111368	404	predicted protein [Populus trichocarpa]	0.989	0.938	0.650	1e-146
255561745	394	pentatricopeptide repeat-containing prot	0.895	0.870	0.714	1e-146
356523378	436	PREDICTED: uncharacterized protein At4g1	0.916	0.805	0.658	1e-139
356575476	364	PREDICTED: uncharacterized protein At4g1	0.895	0.942	0.687	1e-137
356534414	364	PREDICTED: uncharacterized protein At4g1	0.895	0.942	0.687	1e-136
359473691	415	PREDICTED: uncharacterized protein At4g1	0.798	0.737	0.745	1e-136
356577001	397	PREDICTED: uncharacterized protein At4g1	0.762	0.735	0.754	1e-131
15223826	386	putative myb DNA binding protein [Arabid	0.843	0.836	0.658	1e-130
297738316	288	unnamed protein product [Vitis vinifera]	0.712	0.947	0.787	1e-130
50198979	354	At1g14590 [Arabidopsis thaliana]	0.843	0.912	0.658	1e-130

>gi|224111368|ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1| predicted protein [Populus trichocarpa]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/389 (65%), Positives = 311/389 (79%), Gaps = 10/389 (2%)

Query: 2   SRRQRAVTAAAAGRGRDSFGFANMMHQVLTESAARPRALFSVASILLTCILVYGVADTLR 61
           +RRQ  VT     R R +  F      +  ES   PRA+    +I ++ +L+YG AD+LR
Sbjct: 13  TRRQLPVTTKQLLRTRFTPSFPAST-SMFPESNV-PRAVLVFVAISVSVLLLYGAADSLR 70

Query: 62  FLPLSN--SFSSFPSIFPSSALDNDSLQVSEEN----RLETVLNNAAMQDRTVILTTLNE 115
           F   S+  SF+ FPS+  S+  D+  L ++++     +LE VL  AAM+D+TVI+ TLNE
Sbjct: 71  FQSSSSGYSFNIFPSLRNSNNSDS-KLSINDDGDDDYKLEKVLKEAAMEDKTVIIATLNE 129

Query: 116 AWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFH 175
           AWAAP+++IDLFLESFRIG GTR+LLNHLVI+ALD+KA++RC+  H HCFAL+T G+DFH
Sbjct: 130 AWAAPNTIIDLFLESFRIGQGTRRLLNHLVIVALDRKAYKRCMEFHAHCFALVTQGLDFH 189

Query: 176 QEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDH 235
            EAYFMTP YL+MMW+RIDFLR VL+MGYNF+FTDADIMWFRDPFPRFY DADFQ+ACDH
Sbjct: 190 DEAYFMTPAYLEMMWRRIDFLRAVLQMGYNFVFTDADIMWFRDPFPRFYLDADFQIACDH 249

Query: 236 FLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDI 295
           FLG+  D+QNRPNGGFN+VKSNNR+IEFY+FWY+SRETYPGYHDQDVLN IKFDP I D+
Sbjct: 250 FLGNSSDIQNRPNGGFNYVKSNNRTIEFYKFWYSSRETYPGYHDQDVLNFIKFDPFIEDL 309

Query: 296 GLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTL 355
           GLK++FLDTA+FGGLCEPS+D N+VCTMHANCCYGL+SKL DLRIMLQDWK FLSLP  L
Sbjct: 310 GLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDSKLHDLRIMLQDWKTFLSLPPAL 369

Query: 356 KKSAMFSWTVPENCSLDSL-HYNSTRMSL 383
           K+S+   WTVP+NCSL+SL  Y+S   S+
Sbjct: 370 KRSSSMLWTVPQNCSLNSLRRYDSPEKSV 398

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561745|ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223538920|gb|EEF40518.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/347 (71%), Positives = 290/347 (83%), Gaps = 4/347 (1%)

Query: 37  PRALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLET 96
           PR +     + L C+L+YG +D+ RFL   ++  S P IFPS A+D DSL VS E +LE 
Sbjct: 46  PRGVLVFGFMSLCCLLLYGASDSPRFLSFPSA--SLPYIFPS-AVDTDSLPVSNEQKLEK 102

Query: 97  VLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFER 156
           VL  AAM+D+TVILTTLNEAWAAP+SVIDLFL SFR+G+ TRKLLNHLVIIALDQKA  R
Sbjct: 103 VLKEAAMKDKTVILTTLNEAWAAPNSVIDLFLASFRLGEHTRKLLNHLVIIALDQKANAR 162

Query: 157 CLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWF 216
           C+ +H HCFAL+TDG+DF  EAYFMTP YLKMMW+RIDFLR+VLEMGYNF+FTDADIMWF
Sbjct: 163 CIQVHDHCFALLTDGIDFSNEAYFMTPAYLKMMWRRIDFLRSVLEMGYNFVFTDADIMWF 222

Query: 217 RDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPG 276
           RDPFPRFY DADFQ+ACDHF GS  ++ N+PNGGFN+V+SNNRSIEFY+FWY+SRETYPG
Sbjct: 223 RDPFPRFYSDADFQIACDHFTGSSINIHNKPNGGFNYVRSNNRSIEFYKFWYSSRETYPG 282

Query: 277 YHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLI 336
            HDQDVLN IK    I D+GLK++FLDTA+FGGLCEPS+D N+VCTMHANCCYGL SKL 
Sbjct: 283 IHDQDVLNKIKNASFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLESKLH 342

Query: 337 DLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL-HYNSTRMS 382
           DLRIMLQDWK FLSLP +LK+S++ SW VP+NCSLDSL HY S + S
Sbjct: 343 DLRIMLQDWKRFLSLPPSLKRSSVVSWRVPQNCSLDSLRHYGSPQTS 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523378|ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/369 (65%), Positives = 290/369 (78%), Gaps = 18/369 (4%)

Query: 23  ANMMHQVLTESAARPRALFSVASIL----LTCILVYGVADTLRFLPLSNSFSSFPSIFP- 77
           A +M    T +A   R +   A +     L+C+L++  A    F+  SN  S F ++FP 
Sbjct: 27  AALMSPESTATALNLRRILGAALLFFLVSLSCVLLFRNAYYSVFVS-SNPLSRFTTVFPP 85

Query: 78  --SSALD----------NDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVID 125
             S+AL           ++ + V+ E  LE +L+ AAMQDRTVILTTLNEAWAAP+S+ID
Sbjct: 86  NDSAALSGIEKLFEVGLDERILVTNEYSLENILSEAAMQDRTVILTTLNEAWAAPNSIID 145

Query: 126 LFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQY 185
           LFLESFRIGD TR+LLNHLVIIALDQKAF RC  +H +C+ L+++  DFH+EAYFMTP Y
Sbjct: 146 LFLESFRIGDHTRRLLNHLVIIALDQKAFIRCQAIHTYCYLLVSEATDFHEEAYFMTPSY 205

Query: 186 LKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQN 245
           LKMMW+RIDFLR+VLEMGYNF+FTDADIMWFRDPFPRF+ DADFQ+ACDHF GS DDVQN
Sbjct: 206 LKMMWRRIDFLRSVLEMGYNFVFTDADIMWFRDPFPRFHRDADFQIACDHFTGSFDDVQN 265

Query: 246 RPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTA 305
           RPNGGFN VKSNNRSIEFY+FWY+SRETYPGYHDQDVLN IK DP I D+GL++KFLDTA
Sbjct: 266 RPNGGFNFVKSNNRSIEFYKFWYSSRETYPGYHDQDVLNFIKVDPFITDLGLRMKFLDTA 325

Query: 306 YFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTV 365
            FGGLCEPS D N VCTMHANCCYG++SKL DLRIMLQDWKY+L+L  +LK+ ++ SW V
Sbjct: 326 NFGGLCEPSRDLNKVCTMHANCCYGMDSKLHDLRIMLQDWKYYLTLSPSLKRLSIISWRV 385

Query: 366 PENCSLDSL 374
           P+NCSLDSL
Sbjct: 386 PQNCSLDSL 394

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575476|ref|XP_003555866.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/349 (68%), Positives = 283/349 (81%), Gaps = 6/349 (1%)

Query: 39  ALFSVASILLTCILVYGVADTLRFLPLSNSFS---SFPSIFPSSALDNDSLQVSEENRLE 95
           A F  A++ L+C+++ G  D+ RFL   +S      F  IFPS  + ND +  S E  LE
Sbjct: 16  ASFFFATVSLSCLVLLGDVDSHRFLSSFHSSYSLSGFTRIFPS--VYNDPVATSNEYPLE 73

Query: 96  TVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFE 155
            +LN AAM+DRTVILTTLNEAWAAP+SVIDLFLESFRIGD T   L+HLVIIALDQKAF 
Sbjct: 74  KILNEAAMKDRTVILTTLNEAWAAPNSVIDLFLESFRIGDRTSTFLDHLVIIALDQKAFA 133

Query: 156 RCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMW 215
           RC  +H +CF+L+++  DFH+EAYFMTP+YL MMWKRIDFLRTVLEMGYNF+FTDADIMW
Sbjct: 134 RCQVIHTYCFSLVSEEADFHEEAYFMTPRYLMMMWKRIDFLRTVLEMGYNFVFTDADIMW 193

Query: 216 FRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP 275
           FRDPFP F+ DADFQ+ACDHF G  DDVQNRPNGGFN+VKSNNRSIEFY+FWY+SRETYP
Sbjct: 194 FRDPFPLFHLDADFQIACDHFTGRFDDVQNRPNGGFNYVKSNNRSIEFYKFWYSSRETYP 253

Query: 276 GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKL 335
           GYHDQDVLN IK  P I DIGLK++FLDT  FGGLCEPS D N VCTMHANCC G++SKL
Sbjct: 254 GYHDQDVLNFIKVHPFITDIGLKMRFLDTTNFGGLCEPSRDLNQVCTMHANCCLGMDSKL 313

Query: 336 IDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDS-LHYNSTRMSL 383
            DLRIMLQDWK++LSLP +LK+ ++ SW VP+ CS++S LH+NST  S+
Sbjct: 314 HDLRIMLQDWKHYLSLPTSLKRLSVVSWRVPQKCSIESLLHHNSTEKSV 362

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534414|ref|XP_003535750.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/349 (68%), Positives = 281/349 (80%), Gaps = 6/349 (1%)

Query: 39  ALFSVASILLTCILVYGVADTLRFLPLSNSFS---SFPSIFPSSALDNDSLQVSEENRLE 95
           A F  A++ L+C+++ G  D+ RFL   +S      F  IFPS  + ND +  S E  LE
Sbjct: 16  ASFFFATVSLSCLVLLGDVDSHRFLSSFHSSYSLSGFTRIFPS--VYNDPVATSNEYPLE 73

Query: 96  TVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFE 155
            +LN+AAM+DRTVILTTLNEAWA P+SVIDLFLESFRIGD T   LNHLVIIALDQKAF 
Sbjct: 74  KILNDAAMKDRTVILTTLNEAWATPNSVIDLFLESFRIGDRTSTFLNHLVIIALDQKAFA 133

Query: 156 RCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMW 215
           RC  +H HCF+L+++  DFH+EAYFMTP+YL MMWKRIDFLRTVLEMGYNF+FTDADIMW
Sbjct: 134 RCQVIHTHCFSLVSEEADFHEEAYFMTPRYLMMMWKRIDFLRTVLEMGYNFVFTDADIMW 193

Query: 216 FRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP 275
           FRDPFP+F   ADFQ+ACDHF G  DDVQNRPNGGFN+VKSNNRSIEFY+FWY+SRETYP
Sbjct: 194 FRDPFPQFDLHADFQIACDHFTGGFDDVQNRPNGGFNYVKSNNRSIEFYKFWYSSRETYP 253

Query: 276 GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKL 335
           GYHDQDVLN IK  P I DIGLK++FLDT  FGGLCEPS D N VCTMHANCC G++SKL
Sbjct: 254 GYHDQDVLNFIKVHPFITDIGLKMRFLDTTNFGGLCEPSRDLNQVCTMHANCCLGMDSKL 313

Query: 336 IDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDS-LHYNSTRMSL 383
            DLRIMLQDWK++LSLP +LK+ ++ SW VP+ CS++S LH NST  S+
Sbjct: 314 HDLRIMLQDWKHYLSLPPSLKRLSVVSWRVPQKCSIESLLHPNSTEKSV 362

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473691|ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 229/307 (74%), Positives = 265/307 (86%), Gaps = 1/307 (0%)

Query: 70  SSFPSIFPSSALD-NDSLQVSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFL 128
           ++F  I PS   +  +S   +EE RLE VL +AAM+D TVILTTLNEAWAAPDSVIDLFL
Sbjct: 94  ATFGLILPSDPSEVGNSPPENEELRLERVLKDAAMEDHTVILTTLNEAWAAPDSVIDLFL 153

Query: 129 ESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKM 188
           ESFRIGD TR+ LNHLVIIALDQKAF RCL LH HCF L+T+GVDF  EAYFMT  YLKM
Sbjct: 154 ESFRIGDHTRRYLNHLVIIALDQKAFARCLILHNHCFTLVTEGVDFSGEAYFMTSDYLKM 213

Query: 189 MWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPN 248
           MW+RIDFLR+VLEMGYNFIF+DADIMWFRDPFP F P+ADFQ+ACDHFLG P +V NRPN
Sbjct: 214 MWRRIDFLRSVLEMGYNFIFSDADIMWFRDPFPHFLPNADFQIACDHFLGDPYNVNNRPN 273

Query: 249 GGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFG 308
           GGFN+V+SNNRSIEFY+FWY+SRETYPG HDQDVLNIIKFDP IM+IGL+++FLDTA+FG
Sbjct: 274 GGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLDTAHFG 333

Query: 309 GLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPEN 368
           GLCEPS+D N+V TMHANCC+GL SKL DLRIMLQDWK ++SLP +LK+S+  +W VP+N
Sbjct: 334 GLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATWRVPQN 393

Query: 369 CSLDSLH 375
           CSLD+L 
Sbjct: 394 CSLDALQ 400

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577001|ref|XP_003556618.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/293 (75%), Positives = 253/293 (86%), Gaps = 1/293 (0%)

Query: 88  VSEENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVII 147
           V+ +  LE +LN AAMQDRTVILTTLNEAWAA +S+IDLFLESFRIGD TR+LLNHLVII
Sbjct: 97  VTNDYSLENILNEAAMQDRTVILTTLNEAWAATNSIIDLFLESFRIGDRTRRLLNHLVII 156

Query: 148 ALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFI 207
           ALDQKAF RC  +H +C+ L+ +  DFH+EAYFMTP YLKMMW+RIDFLR+VLEMGYNF+
Sbjct: 157 ALDQKAFMRCQAIHTYCYLLVNEATDFHKEAYFMTPSYLKMMWRRIDFLRSVLEMGYNFV 216

Query: 208 FTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFW 267
           FTD DIMWFRDPFP F+ DADFQ+ACDHF GS DDVQNRPNGGFN VKSNNRSIEFY+FW
Sbjct: 217 FTDVDIMWFRDPFPWFHRDADFQIACDHFTGSFDDVQNRPNGGFNFVKSNNRSIEFYKFW 276

Query: 268 YASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANC 327
           Y+SRETYPGYHDQDVLN IK DP I ++GLK+ FLDTA FGGLCEPS D N VCTMHANC
Sbjct: 277 YSSRETYPGYHDQDVLNFIKVDPFITELGLKMIFLDTANFGGLCEPSRDLNKVCTMHANC 336

Query: 328 CYGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL-HYNST 379
           CYG++SKL DLRIMLQDWKY L+L  +LK+ ++ SW VP+NCSLDSL HY+ +
Sbjct: 337 CYGMDSKLHDLRIMLQDWKYHLTLSPSLKRLSIISWRVPQNCSLDSLKHYHGS 389

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223826|ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis thaliana] gi|7527728|gb|AAF63177.1|AC010657_13 T5E21.9 [Arabidopsis thaliana] gi|332191067|gb|AEE29188.1| putative myb DNA binding protein [Arabidopsis thaliana]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/337 (65%), Positives = 270/337 (80%), Gaps = 14/337 (4%)

Query: 38  RALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETV 97
           RA   +A+I ++C ++Y  AD+L F P        P    SS LDN      EE +LE V
Sbjct: 43  RAALFLAAISISCFVLYRAADSLSFSP--------PIFDLSSYLDN------EEPKLEDV 88

Query: 98  LNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERC 157
           L+ AA +DRTV+LTTLN AWAAP SVIDLF ESFRIG+ T ++L+HLVI+ALD KA+ RC
Sbjct: 89  LSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYSRC 148

Query: 158 LTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFR 217
           L LH+HCF+L+T+GVDF +EAYFMT  YLKMMW+RID LR+VLEMGYNF+FTDAD+MWFR
Sbjct: 149 LELHKHCFSLVTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMGYNFVFTDADVMWFR 208

Query: 218 DPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGY 277
           +PFPRFY  ADFQ+ACDH+LG  +D+ NRPNGGFN V+SNNR+I FY++WYASR  +PGY
Sbjct: 209 NPFPRFYMYADFQIACDHYLGRSNDLHNRPNGGFNFVRSNNRTILFYKYWYASRLRFPGY 268

Query: 278 HDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLID 337
           HDQDVLN +K +P +  IGLK++FL+TAYFGGLCEPS D N+V TMHANCCYG+ SKL D
Sbjct: 269 HDQDVLNFLKAEPFVFRIGLKMRFLNTAYFGGLCEPSRDLNLVRTMHANCCYGMESKLHD 328

Query: 338 LRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL 374
           LRIMLQDWK F+SLPL LK+S+ FSW VP+NCSLDSL
Sbjct: 329 LRIMLQDWKDFMSLPLHLKQSSGFSWKVPQNCSLDSL 365

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738316|emb|CBI27517.3| unnamed protein product [Vitis vinifera]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/273 (78%), Positives = 245/273 (89%)

Query: 103 MQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHR 162
           M+D TVILTTLNEAWAAPDSVIDLFLESFRIGD TR+ LNHLVIIALDQKAF RCL LH 
Sbjct: 1   MEDHTVILTTLNEAWAAPDSVIDLFLESFRIGDHTRRYLNHLVIIALDQKAFARCLILHN 60

Query: 163 HCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPR 222
           HCF L+T+GVDF  EAYFMT  YLKMMW+RIDFLR+VLEMGYNFIF+DADIMWFRDPFP 
Sbjct: 61  HCFTLVTEGVDFSGEAYFMTSDYLKMMWRRIDFLRSVLEMGYNFIFSDADIMWFRDPFPH 120

Query: 223 FYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDV 282
           F P+ADFQ+ACDHFLG P +V NRPNGGFN+V+SNNRSIEFY+FWY+SRETYPG HDQDV
Sbjct: 121 FLPNADFQIACDHFLGDPYNVNNRPNGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDV 180

Query: 283 LNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRIML 342
           LNIIKFDP IM+IGL+++FLDTA+FGGLCEPS+D N+V TMHANCC+GL SKL DLRIML
Sbjct: 181 LNIIKFDPFIMNIGLEMRFLDTAHFGGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIML 240

Query: 343 QDWKYFLSLPLTLKKSAMFSWTVPENCSLDSLH 375
           QDWK ++SLP +LK+S+  +W VP+NCSLD+L 
Sbjct: 241 QDWKEYMSLPPSLKRSSEATWRVPQNCSLDALQ 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|50198979|gb|AAT70491.1| At1g14590 [Arabidopsis thaliana]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/337 (65%), Positives = 270/337 (80%), Gaps = 14/337 (4%)

Query: 38  RALFSVASILLTCILVYGVADTLRFLPLSNSFSSFPSIFPSSALDNDSLQVSEENRLETV 97
           RA   +A+I ++C ++Y  AD+L F P        P    SS LDN      EE +LE V
Sbjct: 11  RAALFLAAISISCFVLYRAADSLSFSP--------PIFDLSSYLDN------EEPKLEDV 56

Query: 98  LNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERC 157
           L+ AA +DRTV+LTTLN AWAAP SVIDLF ESFRIG+ T ++L+HLVI+ALD KA+ RC
Sbjct: 57  LSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYSRC 116

Query: 158 LTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFR 217
           L LH+HCF+L+T+GVDF +EAYFMT  YLKMMW+RID LR+VLEMGYNF+FTDAD+MWFR
Sbjct: 117 LELHKHCFSLVTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMGYNFVFTDADVMWFR 176

Query: 218 DPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGY 277
           +PFPRFY  ADFQ+ACDH+LG  +D+ NRPNGGFN V+SNNR+I FY++WYASR  +PGY
Sbjct: 177 NPFPRFYMYADFQIACDHYLGRSNDLHNRPNGGFNFVRSNNRTILFYKYWYASRLRFPGY 236

Query: 278 HDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLID 337
           HDQDVLN +K +P +  IGLK++FL+TAYFGGLCEPS D N+V TMHANCCYG+ SKL D
Sbjct: 237 HDQDVLNFLKAEPFVFRIGLKMRFLNTAYFGGLCEPSRDLNLVRTMHANCCYGMESKLHD 296

Query: 338 LRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL 374
           LRIMLQDWK F+SLPL LK+S+ FSW VP+NCSLDSL
Sbjct: 297 LRIMLQDWKDFMSLPLHLKQSSGFSWKVPQNCSLDSL 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
TAIR|locus:2204508	386	AT1G14590 "AT1G14590" [Arabido	0.845	0.839	0.640	8.8e-118
TAIR|locus:4515102789	408	AT2G02061 "AT2G02061" [Arabido	0.744	0.698	0.695	1.6e-111
TAIR|locus:2119827	715	AT4G19970 "AT4G19970" [Arabido	0.707	0.379	0.609	2.1e-93
TAIR|locus:2156304	367	AT5G44820 "AT5G44820" [Arabido	0.712	0.743	0.590	6.3e-92
TAIR|locus:2018783	340	AT1G28710 "AT1G28710" [Arabido	0.663	0.747	0.416	6.3e-53
TAIR|locus:2018688	338	AT1G28700 "AT1G28700" [Arabido	0.657	0.745	0.403	1.5e-51
TAIR|locus:1006230710	329	AT1G28695 "AT1G28695" [Arabido	0.660	0.768	0.395	8.5e-49
TAIR|locus:2164476	322	AT5G40900 "AT5G40900" [Arabido	0.660	0.785	0.365	1.6e-45

TAIR|locus:2204508 AT1G14590 "AT1G14590" [Arabidopsis thaliana (taxid:3702)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 217/339 (64%), Positives = 266/339 (78%)

Query:    36 RPRALFSVASILLTCILVYGVADTXXXXXXXXXXXXXXXXXXXXXXDNDSLQVSEENRLE 95
             R  ALF +A+I ++C ++Y  AD+                      D  S   +EE +LE
Sbjct:    42 RRAALF-LAAISISCFVLYRAADSLSFSPPIF--------------DLSSYLDNEEPKLE 86

Query:    96 TVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFE 155
              VL+ AA +DRTV+LTTLN AWAAP SVIDLF ESFRIG+ T ++L+HLVI+ALD KA+ 
Sbjct:    87 DVLSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYS 146

Query:   156 RCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMW 215
             RCL LH+HCF+L+T+GVDF +EAYFMT  YLKMMW+RID LR+VLEMGYNF+FTDAD+MW
Sbjct:   147 RCLELHKHCFSLVTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMGYNFVFTDADVMW 206

Query:   216 FRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP 275
             FR+PFPRFY  ADFQ+ACDH+LG  +D+ NRPNGGFN V+SNNR+I FY++WYASR  +P
Sbjct:   207 FRNPFPRFYMYADFQIACDHYLGRSNDLHNRPNGGFNFVRSNNRTILFYKYWYASRLRFP 266

Query:   276 GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKL 335
             GYHDQDVLN +K +P +  IGLK++FL+TAYFGGLCEPS D N+V TMHANCCYG+ SKL
Sbjct:   267 GYHDQDVLNFLKAEPFVFRIGLKMRFLNTAYFGGLCEPSRDLNLVRTMHANCCYGMESKL 326

Query:   336 IDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL 374
              DLRIMLQDWK F+SLPL LK+S+ FSW VP+NCSLDSL
Sbjct:   327 HDLRIMLQDWKDFMSLPLHLKQSSGFSWKVPQNCSLDSL 365

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:4515102789 AT2G02061 "AT2G02061" [Arabidopsis thaliana (taxid:3702)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 199/286 (69%), Positives = 234/286 (81%)

Query:    90 EENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIAL 149
             EE +LE VL  AA +D TVILTTLNEAWAAP SVIDLF ESFRIG GTR+LL HLVIIAL
Sbjct:   104 EEPKLEEVLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESFRIGKGTRRLLKHLVIIAL 163

Query:   150 DQKAFERCLTLHRHCFALITDGVDFHQ-EAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIF 208
             D KA+ RC  LH+HCF L T+GVDF   EAYFMTP YL MMW+RI FLR+VLE GYNF+F
Sbjct:   164 DAKAYSRCQELHKHCFRLETEGVDFSGGEAYFMTPSYLTMMWRRISFLRSVLEKGYNFVF 223

Query:   209 TDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWY 268
             TDAD+MWFR+PF RFY D DFQ+ACDH++G P+D +NRPNGGF  V++NNRSI FY+FWY
Sbjct:   224 TDADVMWFRNPFRRFYEDGDFQIACDHYIGRPNDFRNRPNGGFTFVRANNRSIGFYKFWY 283

Query:   269 ASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCC 328
              SR  YP  HDQDVLN IK DP +  + ++I+FL+T YFGG CEPS+D N+VCTMHANCC
Sbjct:   284 DSRTKYPKNHDQDVLNFIKTDPFLWKLRIRIRFLNTVYFGGFCEPSKDLNLVCTMHANCC 343

Query:   329 YGLNSKLIDLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLDSL 374
             +GL+SKL DLRIMLQDW+ F SLPL   +S+ F+W+VP+NCSLDSL
Sbjct:   344 FGLDSKLHDLRIMLQDWRDFKSLPLHSNQSSGFTWSVPQNCSLDSL 389

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119827 AT4G19970 "AT4G19970" [Arabidopsis thaliana (taxid:3702)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 167/274 (60%), Positives = 203/274 (74%)

Query:    97 VLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFER 156
             VL NA+ ++RTVI+TTLN+AWA P+S+ DLFLESFRIG GT+KLL H+V++ LD KAF R
Sbjct:   445 VLENASTENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLLQHVVVVCLDSKAFAR 504

Query:   157 CLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWF 216
             C  LH +C+ L T G DF  E  F TP YLKMMW+RI+ L  VLEMGYNFIFTDADIMW 
Sbjct:   505 CSQLHPNCYYLKTTGTDFSGEKLFATPDYLKMMWRRIELLTQVLEMGYNFIFTDADIMWL 564

Query:   217 RDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPG 276
             RDPFPR YPD DFQ+ACD F G P D  N  NGGF +VKSN+RSIEFY+FWY SR  YP 
Sbjct:   565 RDPFPRLYPDGDFQMACDRFFGDPHDSDNWVNGGFTYVKSNHRSIEFYKFWYNSRLDYPK 624

Query:   277 YHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLI 336
              HDQDV N IK    + +IG++++F DT YFGG C+ S D N+VCTMHANCC GL  KL 
Sbjct:   625 MHDQDVFNQIKHKALVSEIGIQMRFFDTVYFGGFCQTSRDINLVCTMHANCCVGLAKKLH 684

Query:   337 DLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCS 370
             DL ++L DW+ +LSL   +K +   +W+VP  C+
Sbjct:   685 DLNLVLDDWRNYLSLSEPVKNT---TWSVPMKCT 715

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2156304 AT5G44820 "AT5G44820" [Arabidopsis thaliana (taxid:3702)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 163/276 (59%), Positives = 205/276 (74%)

Query:    97 VLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFER 156
             +L NA+ ++ TVI+TTLN+AWA P+S+ DLFLESFRIG GT++LL H+V++ LD KAFER
Sbjct:    95 ILENASTKNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIKAFER 154

Query:   157 CLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWF 216
             C  LH +C+ + T   DF  E  + TP YLKMMW RID L  VLEMG+NFIFTDADIMW 
Sbjct:   155 CSQLHTNCYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFTDADIMWL 214

Query:   217 RDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPG 276
             RDPFPR YPD DFQ+ACD F G+P D  N  NGGF +V+SNNRSIEFY+FW+ SR  YP 
Sbjct:   215 RDPFPRLYPDGDFQMACDRFFGNPYDSDNWVNGGFTYVRSNNRSIEFYKFWHKSRLDYPD 274

Query:   277 YHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLI 336
              HDQDV N IK +P I +IG++++F DT YFGG C+ S D N+VCTMHANCC GL+ KL 
Sbjct:   275 LHDQDVFNRIKHEPFISEIGIQMRFFDTVYFGGFCQTSRDINLVCTMHANCCIGLDKKLH 334

Query:   337 DLRIMLQDWKYFLSLPLTLKKSAMFSWTVPENCSLD 372
             DL ++L DW+ +LSL   ++ +   +W+VP  C  D
Sbjct:   335 DLNLVLDDWRKYLSLSEPVQNT---TWSVPMKCLED 367

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2018783 AT1G28710 "AT1G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 110/264 (41%), Positives = 163/264 (61%)

Query:    92 NRLETVLNNAAM-QDRTVILTTLNEAWAAP----DSVIDLFLESFRIGDGTRKLLNHLVI 146
             + LE VL+ AAM  ++TVI+  +N+A+        +++DLFLESF  G+GTR LL+HL++
Sbjct:    52 DELEAVLDKAAMGNNKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLDHLML 111

Query:   147 IALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNF 206
             +A DQ +++RCL    HC+ + TDGVD   E  +M+  +++MMW+R   L  VL  GYN 
Sbjct:   112 VAADQTSYDRCLFRRLHCYKMDTDGVDLEGEKVYMSKDFIEMMWRRTHLLLDVLSRGYNL 171

Query:   207 IFTDADIMWFRDPFPRF-YPDA-DFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFY 264
              FTD D+MW R PFPR  Y ++ D Q++ D  +G      +  N GF HV+SNN++I  +
Sbjct:   172 TFTDTDVMWLRSPFPRLSYNESLDMQISVDS-IGLVGG--HLINTGFYHVRSNNKTISLF 228

Query:   265 RFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMH 324
             + WY  R    G  +QDVL  +        +GL + FL+T  F G C+ S D  VV T+H
Sbjct:   229 QKWYDMRLKSTGMKEQDVLKSLLDSGFFNQLGLNVGFLNTTEFSGFCQDSHDMGVVTTVH 288

Query:   325 ANCCYGLNSKLIDLRIMLQDWKYF 348
             ANCC  + +K+ DL ++L+DWK +
Sbjct:   289 ANCCRHILAKISDLTLVLRDWKRY 312

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018688 AT1G28700 "AT1G28700" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 106/263 (40%), Positives = 158/263 (60%)

Query:    92 NRLETVLNNAAM-QDRTVILTTLNEAWAAPD----SVIDLFLESFRIGDGTRKLLNHLVI 146
             + LETVL+ A+   ++TVI+  +N+A+   D    +++DLFLESF  G+GTR LLNHL++
Sbjct:    53 DELETVLDKASTGNNKTVIIAMVNKAYVEEDGGGRTMLDLFLESFWEGEGTRPLLNHLMV 112

Query:   147 IALDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNF 206
             +A DQ A++RCL    HC+ + T+GVD   E  +M+  +++MMW+R   L  VL  GY+ 
Sbjct:   113 VAADQTAYDRCLFRRLHCYKMDTEGVDLEGEKVYMSKDFIEMMWRRTRLLLDVLSRGYHI 172

Query:   207 IFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRP-NGGFNHVKSNNRSIEFYR 265
             IFTD D+MW R P  R     D  ++ D      ++V+ +  N GF H +SNN++I  ++
Sbjct:   173 IFTDTDVMWLRSPLSRLNVSLDMHISVDR-----NNVRGQLINTGFYHARSNNKTISLFQ 227

Query:   266 FWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHA 325
              WY  R    G  +QDVL  +        +GL + FL TA F G C+ S D   V T+HA
Sbjct:   228 KWYDMRLKSLGMKEQDVLKNLLDSGFFNQLGLNVGFLSTAEFSGFCQDSPDMGAVTTVHA 287

Query:   326 NCCYGLNSKLIDLRIMLQDWKYF 348
             NCC  + +K+ DL + L+DWK +
Sbjct:   288 NCCVHIPAKISDLSLALRDWKRY 310

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:1006230710 AT1G28695 "AT1G28695" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 104/263 (39%), Positives = 151/263 (57%)

Query:    92 NRLETVLNNAAM-QDRTVILTTLNEAWAAP----DSVIDLFLESFRIGDGTRKLLNHLVI 146
             + LE  L  AA   ++TVI+T +N+A+        +++DLFLESF  G+GT  LL+HL++
Sbjct:    43 DELEAALYTAAAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMV 102

Query:   147 IALDQKAFERCLTLHRHCFALIT-DGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN 205
             +A+DQ A++RC     HC+ + T DGVD   E  FM+  +++MMW+R   +  VL  GYN
Sbjct:   103 VAVDQTAYDRCRFKRLHCYKMETEDGVDLEGEKVFMSKDFIEMMWRRTRLILDVLRRGYN 162

Query:   206 FIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYR 265
              IFTD D+MW R P  R     D Q++ D        +    N GF HV+SNN++I  ++
Sbjct:   163 VIFTDTDVMWLRSPLSRLNMSLDMQISVDRINVGGQLI----NTGFYHVRSNNKTISLFQ 218

Query:   266 FWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSEDFNVVCTMHA 325
              WY  R    G  +QDVL  +        +GL + FL T  F G C+ S    VV T+HA
Sbjct:   219 KWYDMRLNSTGMKEQDVLKNLLDSGFFNQLGLNVGFLSTTEFSGFCQDSPHMGVVTTVHA 278

Query:   326 NCCYGLNSKLIDLRIMLQDWKYF 348
             NCC  + +K+ DL  +L+DWK +
Sbjct:   279 NCCLHIPAKVFDLTRVLRDWKRY 301

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164476 AT5G40900 "AT5G40900" [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 95/260 (36%), Positives = 152/260 (58%)

Query:    90 EENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIAL 149
             E + L ++L  AA +D+ VI+T ++  WA PDS++DLFLES RIG+ T+ LLNHL+++AL
Sbjct:    53 ESSGLSSLLKEAATEDKIVIITMVDREWAKPDSILDLFLESVRIGERTKHLLNHLIVVAL 112

Query:   150 DQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFT 209
             D +A   CL  H HC+          +++  + P  L   W +   ++ +LE+GY+ +FT
Sbjct:   113 DDQALRYCLRAHPHCYLHRYS----RKKSESLKPDGLVTGWNKKSLVKEILELGYHIMFT 168

Query:   210 DADIMWFRDPFPRFYPDADFQVACDHFL--GSPDDVQNRPNGGFNHVKSNNRSIEFYRFW 267
             +AD+MW R+P     P     VAC + L     D +     GGF + KSN+ +I+ +   
Sbjct:   169 EADVMWLRNPLMHCNPQNAISVACGNSLIDHQHDHLTTENTGGFFYAKSNDITIDMFNIL 228

Query:   268 YASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPS-EDFNVVCTMHAN 326
                R  YP   +Q + +I+K +  I  +  K+ FLD A FG  C+P+ +D + + T+HA+
Sbjct:   229 NVERVLYPATGNQSLCDIVKREDVIKALDKKVTFLDDANFGKFCQPNPQDQSKITTVHAS 288

Query:   327 CCYGLNSKLIDLRIMLQDWK 346
             CC+   SK+  L+++LQD K
Sbjct:   289 CCHDTKSKVRYLKLLLQDRK 308


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      383       346   0.00098  116 3  11 22  0.45    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  267 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.53u 0.08s 26.61t   Elapsed:  00:00:01
  Total cpu time:  26.53u 0.08s 26.61t   Elapsed:  00:00:01
  Start:  Thu May  9 15:13:09 2013   End:  Thu May  9 15:13:10 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X000914 hypothetical protein (404 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	383
pfam03407	208	pfam03407, Nucleotid_trans, Nucleotide-diphospho-s	1e-74

>gnl|CDD|217539 pfam03407, Nucleotid_trans, Nucleotide-diphospho-sugar transferase

 Score =  230 bits (588), Expect = 1e-74
 Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)

Query: 139 KLLNHLVIIALDQKAFERCLTLHRHCFALITDGVDFHQ-EAYFMTPQYLKMMWKRIDFLR 197
            LL +L+++ALD++A++RC  L  H   L++D  D  + +  F +  YLKM W+R+  L 
Sbjct: 1   GLLENLLVVALDEEAYKRCKELGPHICYLLSDVKDVSKKDFVFGSKTYLKMSWRRVRLLL 60

Query: 198 TVLEMGYNFIFTDADIMWFRDPFPRFY-PDADFQVACDHFLG-SPDDVQNRPNGGFNHVK 255
            +LE+GYNFIF+D D++W R+PFP  Y PDAD  ++ D++ G + D ++N  NGGF +V+
Sbjct: 61  ELLELGYNFIFSDVDVVWLRNPFPLLYLPDADIIISSDNYDGTTADGLKNWLNGGFFYVR 120

Query: 256 SNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPSE 315
             NRSI  ++ W     TYPG HDQDV N +  + +  ++G K +FLDTA FGG C+   
Sbjct: 121 PTNRSIALFKKWAERLLTYPGLHDQDVFNYLLREGAAGELGYKCRFLDTALFGGFCQSR- 179

Query: 316 DFNVVCT------MHANCCYGLNSKLIDL 338
           D+  V T      +HANCC G + KL  L
Sbjct: 180 DWKYVQTDKKPVAVHANCCSGTDGKLHRL 208

Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. Length = 208

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	383
PF03407	212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	100.0
cd02537	240	GT8_Glycogenin Glycogenin belongs the GT 8 family	98.15
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	97.85
PF05637	239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	97.69
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	97.65
PLN00176	333	galactinol synthase	97.6
PLN03181	453	glycosyltransferase; Provisional	97.58
cd06914	278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	97.03
cd06430	304	GT8_like_2 GT8_like_2 represents a subfamily of GT	96.97
PLN03182	429	xyloglucan 6-xylosyltransferase; Provisional	96.94
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	96.78
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	96.6
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	95.05
COG1442	325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	93.53
cd06429	257	GT8_like_1 GT8_like_1 represents a subfamily of GT	91.91
cd06432	248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	90.63
PF03314	222	DUF273: Protein of unknown function, DUF273; Inter	88.81
PLN02829	639	Probable galacturonosyltransferase	84.74
PLN02718	603	Probable galacturonosyltransferase	84.68
PLN02867	535	Probable galacturonosyltransferase	84.45
PLN02659	534	Probable galacturonosyltransferase	83.43

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []

Probab=100.00  E-value=6.5e-42  Score=317.06  Aligned_cols=200  Identities=30%  Similarity=0.572  Sum_probs=172.3

Q ss_pred             cccccEEEEEecHHHHHHHHhcCccEEEeecCC-cCcccccccccHHHHHHHHHHHHHHHHHHHcCceEEEecceEEecc
Q 016761          139 KLLNHLVIIALDQKAFERCLTLHRHCFALITDG-VDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFR  217 (383)
Q Consensus       139 ~ll~hllVvAlD~~a~~~c~~~g~~c~~~~~~~-~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlR  217 (383)
                      ++++|+||+|+|+++++.|++++++|+...... ........|+++.|++++|.|+.+++++|++||+|+|+|+||||+|
T Consensus         1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~   80 (212)
T PF03407_consen    1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR   80 (212)
T ss_pred             CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence            357899999999999999999999998877641 1222357899999999999999999999999999999999999999


Q ss_pred             CCccCc-CCCCCeeEeccCCCCCC-CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcCCCCCCC
Q 016761          218 DPFPRF-YPDADFQVACDHFLGSP-DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDI  295 (383)
Q Consensus       218 NP~p~f-~~~aDi~issD~~~g~~-~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~~~~~~~  295 (383)
                      ||+++| ++++|+++++|...+.+ ...+..+|+||+|+|+|++|++|++.|.+.+...++.+||.+||.++++......
T Consensus        81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~  160 (212)
T PF03407_consen   81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYG  160 (212)
T ss_pred             CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCc
Confidence            999999 89999999999887643 3345677999999999999999999999988888888999999999965443348


Q ss_pred             CcEEEEccccccC----Cccc-cCC-C---CCceEEEeccccCCcccHHHHH
Q 016761          296 GLKIKFLDTAYFG----GLCE-PSE-D---FNVVCTMHANCCYGLNSKLIDL  338 (383)
Q Consensus       296 gl~v~~L~~~~F~----gf~q-~~~-d---~~~p~~vHaN~~~G~~~K~~rL  338 (383)
                      ++++++||...|+    .|++ ... .   ..+||+||+|||.|.++|++||
T Consensus       161 ~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~  212 (212)
T PF03407_consen  161 GLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF  212 (212)
T ss_pred             CcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence            9999999999996    3677 111 1   2589999999999999999986

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

Probab=98.15  E-value=4.6e-05  Score=72.60  Aligned_cols=189  Identities=17%  Similarity=0.091  Sum_probs=107.6

Q ss_pred             cCccccCCChhHHHHHHhhhhccCcccccccEEEEE---ecHHHHHHHHhcCccEEEeecCCcCcccccccccHHHHHHH
Q 016761          113 LNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA---LDQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMM  189 (383)
Q Consensus       113 ~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA---lD~~a~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~  189 (383)
                      +|.+|+.+   +-..+.|++....  .  .+++|+.   +.++..+.+++.+..+..+..  .+...........+...+
T Consensus         8 ~~~~Y~~~---a~vl~~SL~~~~~--~--~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~--i~~~~~~~~~~~~~~~~~   78 (240)
T cd02537           8 TNDDYLPG---ALVLGYSLRKVGS--S--YDLVVLVTPGVSEESREALEEVGWIVREVEP--IDPPDSANLLKRPRFKDT   78 (240)
T ss_pred             cChhHHHH---HHHHHHHHHhcCC--C--CCEEEEECCCCCHHHHHHHHHcCCEEEecCc--cCCcchhhhccchHHHHH
Confidence            45567542   1123556665321  1  2444444   346667788888866554432  222111112234567788


Q ss_pred             HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHHHHHHHHH
Q 016761          190 WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWY  268 (383)
Q Consensus       190 w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti~f~~~W~  268 (383)
                      |.|+.+...   ..| .||+.|+|++-++|+-+.|..+..+....|..      .....|+||+.++++....+-+.+..
T Consensus        79 ~~kl~~~~l---~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~------~~~~fNsGv~l~~~~~~~~~~~~~~~  149 (240)
T cd02537          79 YTKLRLWNL---TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCG------WPDLFNSGVFVLKPSEETFNDLLDAL  149 (240)
T ss_pred             hHHHHhccc---cccceEEEEeCCeeEccCHHHHhCCCCceeeecccC------ccccccceEEEEcCCHHHHHHHHHHH
Confidence            889776652   256 59999999999999988886522233333321      13578999999999875544443333


Q ss_pred             HHHhcCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Ccccc----CCCCCceEEEecc
Q 016761          269 ASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GLCEP----SEDFNVVCTMHAN  326 (383)
Q Consensus       269 ~~~~~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf~q~----~~d~~~p~~vHaN  326 (383)
                      ..... ....||+++|.+.+..     | .+..||..+ +. +....    ......|.++|-+
T Consensus       150 ~~~~~-~~~~DQdiLN~~~~~~-----~-~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~  206 (240)
T cd02537         150 QDTPS-FDGGDQGLLNSYFSDR-----G-IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI  206 (240)
T ss_pred             hccCC-CCCCCHHHHHHHHcCC-----C-CEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence            22112 2458999999998431     1 566676553 21 11111    1123568999964

Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=97.85  E-value=0.00014  Score=68.87  Aligned_cols=202  Identities=21%  Similarity=0.248  Sum_probs=110.5

Q ss_pred             EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEec--HHHHHHHHhc----CccEEEeecCCcCccccccccc
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALD--QKAFERCLTL----HRHCFALITDGVDFHQEAYFMT  182 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD--~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~gS  182 (383)
                      |+.++|..|..+   +-.-+.|+........  -++.|++.|  ++..+.+++.    +..+-.......++... ...+
T Consensus         3 I~~~~d~~y~~~---~~~~l~Sl~~~~~~~~--~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~-~~~~   76 (248)
T cd04194           3 IVFAIDDNYAPY---LAVTIKSILANNSKRD--YDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFF-PATT   76 (248)
T ss_pred             EEEEecHhhHHH---HHHHHHHHHhcCCCCc--eEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcC-Cccc
Confidence            678889888543   2223556654222111  245666644  6667777665    22222222211112110 0123


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCCC---CCeeEeccCCCC---------CCCCCCCCCce
Q 016761          183 PQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG---------SPDDVQNRPNG  249 (383)
Q Consensus       183 ~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g---------~~~~~~~~~Nt  249 (383)
                      +.|..++..|+.+ -+++. .|+ ||+.|+|++-++|+-+.+..+   .-+....|....         .........|+
T Consensus        77 ~~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNs  154 (248)
T cd04194          77 DHISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNS  154 (248)
T ss_pred             ccccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeee
Confidence            4455666666654 44555 675 999999999999998887542   333444554421         00122357899


Q ss_pred             EEEEEeeCh-HHHHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-CCccccC---------
Q 016761          250 GFNHVKSNN-RSIEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-GGLCEPS---------  314 (383)
Q Consensus       250 Gf~yvRst~-~ti~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~gf~q~~---------  314 (383)
                      |++.+..+. +...+.+.+.+.....+   ...||+++|.+..+        +++.||..+ + .+.+...         
T Consensus       155 Gv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~~  226 (248)
T cd04194         155 GVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD--------KILYLPPRYNFQTGFYYLLKKKSKEEQE  226 (248)
T ss_pred             cchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC--------CeEEcCcccccchhHhHHhhccchhHHH
Confidence            999997653 22233444433333332   35899999999843        167777554 2 2222111         


Q ss_pred             --CCCCceEEEecc
Q 016761          315 --EDFNVVCTMHAN  326 (383)
Q Consensus       315 --~d~~~p~~vHaN  326 (383)
                        .....|.++|-+
T Consensus       227 ~~~~~~~~~iiHf~  240 (248)
T cd04194         227 LEEARKNPVIIHYT  240 (248)
T ss_pred             HHHHhcCCEEEEeC
Confidence              123578999975

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif

Probab=97.69  E-value=4.6e-05  Score=73.00  Aligned_cols=164  Identities=16%  Similarity=0.179  Sum_probs=33.1

Q ss_pred             HHHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCc--e-EEEecceEEeccCCcc---CcC-C-
Q 016761          154 FERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGY--N-FIFTDADIMWFRDPFP---RFY-P-  225 (383)
Q Consensus       154 ~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy--~-VLfsDvDVVWlRNP~p---~f~-~-  225 (383)
                      .++|+..|-.+|......  +      -. .-....|.|+.+|++.+..=-  + |++.|.|++...-=++   ++. + 
T Consensus        34 ~~Ya~~HgY~~~~~~~~~--~------~~-~~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~  104 (239)
T PF05637_consen   34 VDYARRHGYDLYYRNIQE--Y------DD-PERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPS  104 (239)
T ss_dssp             HHHHHHHT-EEEEE-S----S---------SHHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE---------------
T ss_pred             HHHHHhcCCEEEEEChHH--c------CC-CCCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEeccccccccccccc
Confidence            468999998777643311  1      11 223445999999999997532  2 8999999976542233   111 0 


Q ss_pred             CCCee-------EeccCCC-------CCC-----CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhcCC-----CCCChH
Q 016761          226 DADFQ-------VACDHFL-------GSP-----DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYP-----GYHDQD  281 (383)
Q Consensus       226 ~aDi~-------issD~~~-------g~~-----~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p-----~~~DQ~  281 (383)
                      .-|-.       +.-+...       +++     ..-.+.+|+|++++|.++-|+.|++.|..-+....     ...||.
T Consensus       105 ~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQs  184 (239)
T PF05637_consen  105 RLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQS  184 (239)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            00000       0101110       110     11146789999999999999999999976544322     246999


Q ss_pred             HHHHHHcCCCCCCCCcEEEEccccccCCccccC---CCCCceEEEecccc
Q 016761          282 VLNIIKFDPSIMDIGLKIKFLDTAYFGGLCEPS---EDFNVVCTMHANCC  328 (383)
Q Consensus       282 vfN~l~~~~~~~~~gl~v~~L~~~~F~gf~q~~---~d~~~p~~vHaN~~  328 (383)
                      +|..++...  ....-++.++|...|..+-...   .......++|..=|
T Consensus       185 Al~~ll~~~--~~~~~~~~~vpq~~~nsy~~~~~~~~~~~GDfvvhfaGC  232 (239)
T PF05637_consen  185 ALEHLLQWH--PEILSKVALVPQRWFNSYPEDECNYQYKEGDFVVHFAGC  232 (239)
T ss_dssp             --------------------------------------------------
T ss_pred             ccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence            999888431  2233456678887776543321   22345678887666

This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=97.65  E-value=0.0012  Score=62.73  Aligned_cols=135  Identities=17%  Similarity=0.124  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCCC---CCeeEeccCCCC---C-------CCCCCCCCceEE
Q 016761          186 LKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG---S-------PDDVQNRPNGGF  251 (383)
Q Consensus       186 ~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g---~-------~~~~~~~~NtGf  251 (383)
                      ...++.|+. +-++|. .|+ ||+.|+|++-++|.-+.+.-+   .-+.+..|+...   .       ........|+|+
T Consensus        80 ~~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGV  157 (246)
T cd00505          80 KIVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGV  157 (246)
T ss_pred             ccceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeee
Confidence            344555554 455677 784 999999999999998887532   333344444310   0       011235789999


Q ss_pred             EEEeeChHH-HHHHHHHHHHHhc---CCCCCChHHHHHHHcCCCCCCCCcEEEEcccccc-C-CccccC-----CCCCce
Q 016761          252 NHVKSNNRS-IEFYRFWYASRET---YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYF-G-GLCEPS-----EDFNVV  320 (383)
Q Consensus       252 ~yvRst~~t-i~f~~~W~~~~~~---~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F-~-gf~q~~-----~d~~~p  320 (383)
                      +.+..+.-. ..+.+...+....   .....||+++|.++.+     .+.++..||..+= . +.+...     ....+|
T Consensus       158 mlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~  232 (246)
T cd00505         158 FVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ-----VPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNA  232 (246)
T ss_pred             EEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc-----CCCeEEECCCeeeEEecCccccccchhhhcCCC
Confidence            999998763 4444443332222   2356899999999843     3366777876542 1 222221     134689


Q ss_pred             EEEeccc
Q 016761          321 CTMHANC  327 (383)
Q Consensus       321 ~~vHaN~  327 (383)
                      .++|-+.
T Consensus       233 ~iiHy~g  239 (246)
T cd00505         233 KVIHFNG  239 (246)
T ss_pred             EEEEeCC
Confidence            9999753

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PLN00176 galactinol synthase

Probab=97.60  E-value=0.003  Score=63.47  Aligned_cols=223  Identities=17%  Similarity=0.212  Sum_probs=121.6

Q ss_pred             CCeEEEE--EcCccccCCChhHHHHHHhhhhccCcccccccEEEEEecH---HHHHHHHhcCccEEEeecCCcCcc-ccc
Q 016761          105 DRTVILT--TLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALDQ---KAFERCLTLHRHCFALITDGVDFH-QEA  178 (383)
Q Consensus       105 d~tVIlT--~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD~---~a~~~c~~~g~~c~~~~~~~~d~s-~~~  178 (383)
                      .+..-||  ++|..|.. | .+ ....|+|.. ++.   ..++|+..++   +..+.+++.|......+.  .... ...
T Consensus        21 ~~~AyVT~L~~n~~Y~~-G-a~-vL~~SLr~~-~s~---~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~--i~~~~~~~   91 (333)
T PLN00176         21 AKRAYVTFLAGNGDYVK-G-VV-GLAKGLRKV-KSA---YPLVVAVLPDVPEEHRRILVSQGCIVREIEP--VYPPENQT   91 (333)
T ss_pred             CceEEEEEEecCcchHH-H-HH-HHHHHHHHh-CCC---CCEEEEECCCCCHHHHHHHHHcCCEEEEecc--cCCccccc
Confidence            4566677  45778854 2 22 235677653 232   3455555443   556667777754433322  1111 112


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC-CCeeEeccCCCCC-----------------
Q 016761          179 YFMTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD-ADFQVACDHFLGS-----------------  239 (383)
Q Consensus       179 ~~gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~-aDi~issD~~~g~-----------------  239 (383)
                      .|. ..+..+.+.|.++... .  .| .||+.|+|++-++|--+.|.-. .-+....|++...                 
T Consensus        92 ~~~-~~~~~i~~tKl~iw~l-~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~  167 (333)
T PLN00176         92 QFA-MAYYVINYSKLRIWEF-V--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCP  167 (333)
T ss_pred             ccc-cchhhhhhhhhhhccc-c--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccch
Confidence            333 2355667778885543 2  47 5999999999999998777532 2243444543210                 


Q ss_pred             -----CCC----CCCCCceEEEEEeeChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-
Q 016761          240 -----PDD----VQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-  308 (383)
Q Consensus       240 -----~~~----~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-  308 (383)
                           |..    ....+|+|++.+.++..+.+-+-++....... ...||++||.+++.        ++..||..| +. 
T Consensus       168 ~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~-~f~DQD~LN~~F~~--------~~~~Lp~~YN~~~  238 (333)
T PLN00176        168 DKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPT-PFAEQDFLNMFFRD--------IYKPIPPVYNLVL  238 (333)
T ss_pred             hhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCC-CCCCHHHHHHHHcC--------cEEECCchhcCch
Confidence                 000    12478999999999977644333332211111 35899999999943        345566443 11 


Q ss_pred             C-ccc-c-CCCCCceEEEeccc------c-CC--cccHHHHHHHHHHH-HHHhh
Q 016761          309 G-LCE-P-SEDFNVVCTMHANC------C-YG--LNSKLIDLRIMLQD-WKYFL  349 (383)
Q Consensus       309 g-f~q-~-~~d~~~p~~vHaN~------~-~G--~~~K~~rLR~~l~d-W~~~~  349 (383)
                      . ... + ..+..++.+||-..      . .|  ..-++++.+++.+. |.-|-
T Consensus       239 ~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~  292 (333)
T PLN00176        239 AMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYN  292 (333)
T ss_pred             hhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhc
Confidence            1 111 1 11245788999732      1 11  12356777887766 55553

>PLN03181 glycosyltransferase; Provisional

Probab=97.58  E-value=0.009  Score=61.34  Aligned_cols=141  Identities=18%  Similarity=0.290  Sum_probs=87.9

Q ss_pred             HHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCce---EEEecceEEeccCCccCc----CCCC
Q 016761          155 ERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN---FIFTDADIMWFRDPFPRF----YPDA  227 (383)
Q Consensus       155 ~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRNP~p~f----~~~a  227 (383)
                      ++|+.+|..+|....   ....        -....|.|+-+++..+..=-+   |.+.|.|.+.. ||-.-+    +.+.
T Consensus       159 dYArrHGY~lf~~~a---~Ld~--------~~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~~~  226 (453)
T PLN03181        159 DYCRIHGYDIFYNNA---LLHP--------KMNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYRDH  226 (453)
T ss_pred             HHHHHhCCcEEEecc---ccCc--------cCchhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcCCc
Confidence            689999988876533   1111        015579999999998776322   88899998765 552222    2233


Q ss_pred             CeeEeccCCCCCCC--CCCCCCceEEEEEeeChHHHHHHHHHHHHHhc-------------------CCCCCChHHHHHH
Q 016761          228 DFQVACDHFLGSPD--DVQNRPNGGFNHVKSNNRSIEFYRFWYASRET-------------------YPGYHDQDVLNII  286 (383)
Q Consensus       228 Di~issD~~~g~~~--~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~-------------------~p~~~DQ~vfN~l  286 (383)
                      .+++-  ++....+  .--..+|+|.+++|.++-+.+|++.|..+-.+                   .+...||.++-.+
T Consensus       227 NLvvh--g~p~~vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyl  304 (453)
T PLN03181        227 NLVVH--GWPKLIYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYL  304 (453)
T ss_pred             ccccc--CCcccccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHH
Confidence            33321  1100000  11366899999999999999999999874221                   2356899999887


Q ss_pred             HcCCCCCCCCcEEEEccccccCCc
Q 016761          287 KFDPSIMDIGLKIKFLDTAYFGGL  310 (383)
Q Consensus       287 ~~~~~~~~~gl~v~~L~~~~F~gf  310 (383)
                      +-. .-.+-+-++.+=...+|.|+
T Consensus       305 l~~-~~~~w~~k~ylE~~yy~~Gy  327 (453)
T PLN03181        305 LYK-HKEKWGDKIYLEGEYYFEGY  327 (453)
T ss_pred             HHh-ccchhccceeeecceeeeee
Confidence            622 12334556655566667664

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family

Probab=97.03  E-value=0.0031  Score=61.95  Aligned_cols=115  Identities=12%  Similarity=0.033  Sum_probs=72.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC-CCeeEeccCCCCCCCCCCCCCceEEEEEeeCh
Q 016761          181 MTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD-ADFQVACDHFLGSPDDVQNRPNGGFNHVKSNN  258 (383)
Q Consensus       181 gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~-aDi~issD~~~g~~~~~~~~~NtGf~yvRst~  258 (383)
                      +++.|.. ++.|+.+...   ..| .||+.|+|++-++|.-+.|.-+ ..-+.+-+        ....+|+|+|.+.++.
T Consensus        73 ~~~~~~~-~~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~--------~~~~FNSGvmvi~ps~  140 (278)
T cd06914          73 GDAYWAK-SLTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR--------AYWKFASHLMVIKPSK  140 (278)
T ss_pred             CCccHHH-HHHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeec--------CcceecceeEEEeCCH
Confidence            3344544 3777776665   457 4999999999999887777433 11111211        1237899999999998


Q ss_pred             HHHHHHHHHHHHHhc-CCCCCChHHHHHHHcCCCCCCCCcEEEEccccccC
Q 016761          259 RSIEFYRFWYASRET-YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFG  308 (383)
Q Consensus       259 ~ti~f~~~W~~~~~~-~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F~  308 (383)
                      .+-.=+..-...... ..+..||+++|.++.. .......++.+||...++
T Consensus       141 ~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~-~~~~~~~~~~~Lp~~~y~  190 (278)
T cd06914         141 EAFKELMTEILPAYLNKKNEYDMDLINEEFYN-SKQLFKPSVLVLPHRQYG  190 (278)
T ss_pred             HHHHHHHHHHHHhcccCCCCCChHHHHHHHhC-CccccCcceEEcCccccc
Confidence            774444433222222 2356899999999843 323355667788876544

N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function

Probab=96.97  E-value=0.009  Score=59.39  Aligned_cols=149  Identities=16%  Similarity=0.221  Sum_probs=89.1

Q ss_pred             HHHHHHHcCc-eEEEecceEEeccCCccCcCC--CC-C--eeEe-ccCCC------C----CCCCCCCCCceEEEEEeeC
Q 016761          195 FLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP--DA-D--FQVA-CDHFL------G----SPDDVQNRPNGGFNHVKSN  257 (383)
Q Consensus       195 ~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~--~a-D--i~is-sD~~~------g----~~~~~~~~~NtGf~yvRst  257 (383)
                      ++-++|. -+ .||+.|+||+.++|.-+.+..  +- |  +... .|...      .    .+......+|+|++++-=+
T Consensus        89 ~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~  167 (304)
T cd06430          89 FLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLT  167 (304)
T ss_pred             HHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHH
Confidence            3445565 44 699999999999988776643  21 1  2221 12211      1    1111123489999998644


Q ss_pred             hHH------------HHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-CCccccC-----C
Q 016761          258 NRS------------IEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-GGLCEPS-----E  315 (383)
Q Consensus       258 ~~t------------i~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~gf~q~~-----~  315 (383)
                      .--            ..+-+.|.+...++.   ...||++||.++.+     ..-++.+||..+ | +..|+++     +
T Consensus       168 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~-----~p~~~~~Lp~~wN~~~d~~~y~~~~~~~  242 (304)
T cd06430         168 RMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH-----NPEMLYVFPCHWNYRPDHCMYGSNCKAA  242 (304)
T ss_pred             HHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC-----CCCeEEEcCccccCCccceeeccccccc
Confidence            311            223444544444443   25899999999943     234567777543 2 2445432     3


Q ss_pred             CCCceEEEeccccCCcccHHHHHHHHHHHHHHhh
Q 016761          316 DFNVVCTMHANCCYGLNSKLIDLRIMLQDWKYFL  349 (383)
Q Consensus       316 d~~~p~~vHaN~~~G~~~K~~rLR~~l~dW~~~~  349 (383)
                      +...+-++|.|=..=++.|..-+|.+-+--+.|.
T Consensus       243 ~~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~  276 (304)
T cd06430         243 EEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYT  276 (304)
T ss_pred             ccccceEEEcCCCCCCCccchHHHHHHHHHHhcc
Confidence            3457899999966556889889998765555554

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional

Probab=96.94  E-value=0.0077  Score=61.68  Aligned_cols=160  Identities=15%  Similarity=0.183  Sum_probs=102.7

Q ss_pred             HHHHhcCccEEEeecCCcCcccccccccHHHHHHHHHHHHHHHHHHHcCce---EEEecceEEeccCCccCc---CCCCC
Q 016761          155 ERCLTLHRHCFALITDGVDFHQEAYFMTPQYLKMMWKRIDFLRTVLEMGYN---FIFTDADIMWFRDPFPRF---YPDAD  228 (383)
Q Consensus       155 ~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRNP~p~f---~~~aD  228 (383)
                      ++|+..|..+|. ...  .+..+        ..-.|.|+-+|+.++...-+   |.+.|.|.+..--+++.=   +.+.+
T Consensus       158 dYAr~HGY~~fy-n~~--~ld~~--------~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~~N  226 (429)
T PLN03182        158 DYCRLHGIEIFY-NMA--HLDAE--------MAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYN  226 (429)
T ss_pred             HHHHHhCCEEEe-ehh--hcCcC--------CCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCCcC
Confidence            688888877765 321  12110        02349999999999876433   788999998865333311   12334


Q ss_pred             eeEeccCCCCCC--CCCCCCCceEEEEEeeChHHHHHHHHHHHHHhc-------------------CCCCCChHHHHHHH
Q 016761          229 FQVACDHFLGSP--DDVQNRPNGGFNHVKSNNRSIEFYRFWYASRET-------------------YPGYHDQDVLNIIK  287 (383)
Q Consensus       229 i~issD~~~g~~--~~~~~~~NtGf~yvRst~~ti~f~~~W~~~~~~-------------------~p~~~DQ~vfN~l~  287 (383)
                      +++-  ++...-  ..-.+.+|+|.|++|.++-++.|++.|..+..+                   .+...||.++-.++
T Consensus       227 lVih--g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl  304 (429)
T PLN03182        227 LVIH--GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLL  304 (429)
T ss_pred             eeec--cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHH
Confidence            4332  111100  011456899999999999999999999876441                   12468999999988


Q ss_pred             cCCCCCCCCcEEEEccccccCCcccc------------C---CCCCceEEEecccc
Q 016761          288 FDPSIMDIGLKIKFLDTAYFGGLCEP------------S---EDFNVVCTMHANCC  328 (383)
Q Consensus       288 ~~~~~~~~gl~v~~L~~~~F~gf~q~------------~---~d~~~p~~vHaN~~  328 (383)
                      ..+ -..-+-++.+-+..+|-||...            +   -|...|++.|-.-|
T Consensus       305 ~~~-~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~Gc  359 (429)
T PLN03182        305 LTQ-RERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGC  359 (429)
T ss_pred             Hhc-chhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccc
Confidence            332 2345677888788888886421            1   23457999998755

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.78  E-value=0.0015  Score=60.47  Aligned_cols=205  Identities=17%  Similarity=0.139  Sum_probs=101.6

Q ss_pred             EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEE--ecHHHHHHHHhcCccE----EEeecCCcCcc--ccccc
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA--LDQKAFERCLTLHRHC----FALITDGVDFH--QEAYF  180 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA--lD~~a~~~c~~~g~~c----~~~~~~~~d~s--~~~~~  180 (383)
                      |+.++|..|..+   +-.-+.|++...... .--++.|+.  ..++..+..++.+...    ...........  .....
T Consensus         2 i~~~~d~~y~~~---~~v~i~Sl~~~~~~~-~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
T PF01501_consen    2 IVLACDDNYLEG---AAVLIKSLLKNNPDP-SNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSP   77 (250)
T ss_dssp             EEEECSGGGHHH---HHHHHHHHHHTTTT--SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-H
T ss_pred             EEEEeCHHHHHH---HHHHHHHHHHhcccc-ccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccc
Confidence            677888888542   112355665422211 112233443  3445555665554321    11111110000  01112


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCC--CCC-eeEeccC-----CCC-------CCCCCC
Q 016761          181 MTPQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYP--DAD-FQVACDH-----FLG-------SPDDVQ  244 (383)
Q Consensus       181 gS~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~--~aD-i~issD~-----~~g-------~~~~~~  244 (383)
                      ....+..++..|..+-. +| ..|+ ||+.|+||+-++|+-+.|.-  ... +....|.     ...       ......
T Consensus        78 ~~~~~~~~~~~rl~i~~-ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~  155 (250)
T PF01501_consen   78 SKRHFSPATFARLFIPD-LL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNK  155 (250)
T ss_dssp             CCTCGGGGGGGGGGHHH-HS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTT
T ss_pred             ccccccHHHHHHhhhHH-HH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCccc
Confidence            22334555666774444 44 6665 99999999999999888752  222 3333330     000       001235


Q ss_pred             CCCceEEEEEeeChHHHHHHHHH-HHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccccccC--Ccc-----cc
Q 016761          245 NRPNGGFNHVKSNNRSIEFYRFW-YASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYFG--GLC-----EP  313 (383)
Q Consensus       245 ~~~NtGf~yvRst~~ti~f~~~W-~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F~--gf~-----q~  313 (383)
                      ...|+|++.+..+.-...-+... ........   ...||+++|.++.        -++..||..+--  +..     ..
T Consensus       156 ~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~--------~~~~~L~~~~N~~~~~~~~~~~~~  227 (250)
T PF01501_consen  156 PYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY--------GNIKPLPCRYNCQPSWYNQSDDYF  227 (250)
T ss_dssp             TSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT--------TGEEEEEGGGSEEHHHHHHTHHHH
T ss_pred             ccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc--------ceeEEECchhccccccccccchhh
Confidence            78899999999887665433333 33333332   3689999999983        356677765421  111     00


Q ss_pred             CCCCCceEEEeccc
Q 016761          314 SEDFNVVCTMHANC  327 (383)
Q Consensus       314 ~~d~~~p~~vHaN~  327 (383)
                      .....++.++|-+-
T Consensus       228 ~~~~~~~~iiHy~g  241 (250)
T PF01501_consen  228 NPILEDAKIIHYSG  241 (250)
T ss_dssp             HHHGCC-SEEE--S
T ss_pred             HhhcCCeEEEEeCC
Confidence            12345788899743

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=96.60  E-value=0.0081  Score=58.94  Aligned_cols=153  Identities=19%  Similarity=0.235  Sum_probs=81.4

Q ss_pred             HHHHHHHcCc-eEEEecceEEeccCCccCcCC-----CCCeeEeccC----CCCC------C-CCCCCCCceEEEEEeeC
Q 016761          195 FLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP-----DADFQVACDH----FLGS------P-DDVQNRPNGGFNHVKSN  257 (383)
Q Consensus       195 ~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~-----~aDi~issD~----~~g~------~-~~~~~~~NtGf~yvRst  257 (383)
                      ++-++|..-+ .||+.|+|||...|.-+.+..     +.-+....+.    +.+.      + ...+..+|+|++.+--.
T Consensus        89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~  168 (280)
T cd06431          89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD  168 (280)
T ss_pred             HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence            4666776445 699999999999999887743     1123322221    1111      1 11234799999987543


Q ss_pred             h-HHHHHHHHHHHHHhc------CCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Cc-ccc-C--CCCCceEEEe
Q 016761          258 N-RSIEFYRFWYASRET------YPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GL-CEP-S--EDFNVVCTMH  324 (383)
Q Consensus       258 ~-~ti~f~~~W~~~~~~------~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf-~q~-~--~d~~~p~~vH  324 (383)
                      . |-..+.++|.....+      ....+||+++|.++.+.     .-.+..||..+ +. +. +.. .  +....|.++|
T Consensus       169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~-----~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIH  243 (280)
T cd06431         169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQN-----PFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIH  243 (280)
T ss_pred             HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCC-----cceeEECCCccccccCccchHhHhhcCcCCCEEEE
Confidence            2 112233334321111      13468999999998431     01134455443 21 11 111 0  1235799999


Q ss_pred             ccccC--CcccH-HHHHHHHHHHHHHhhcCCccc
Q 016761          325 ANCCY--GLNSK-LIDLRIMLQDWKYFLSLPLTL  355 (383)
Q Consensus       325 aN~~~--G~~~K-~~rLR~~l~dW~~~~~~~~~~  355 (383)
                      -+...  -..++ .+-+|+   .|++|...+.+.
T Consensus       244 f~g~~KPW~~~~~~~~~~~---~~~~~~~~~~~~  274 (280)
T cd06431         244 WNSPKKLRVKNKHVEFFRN---LYLTFLEYDGNL  274 (280)
T ss_pred             eCCCCCCCCcCCCChHHHH---HHHHHHhcCchh
Confidence            86431  11233 366665   577777666443

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=95.05  E-value=0.32  Score=48.95  Aligned_cols=204  Identities=15%  Similarity=0.116  Sum_probs=97.6

Q ss_pred             eEEEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEE--ecHHHHHHHHhc----CccEEEeecCCcCccccccc
Q 016761          107 TVILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA--LDQKAFERCLTL----HRHCFALITDGVDFHQEAYF  180 (383)
Q Consensus       107 tVIlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA--lD~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~  180 (383)
                      .=|+.++|.+|+.+   +..-+.|+........+  ++-|+.  +.++-.+.+.+.    +..+-....+...+.+-  -
T Consensus        26 i~Iv~~~D~ny~~~---~~vsi~Sil~nn~~~~~--~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~--~   98 (334)
T PRK15171         26 LDIAYGIDKNFLFG---CGVSIASVLLNNPDKSL--VFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSL--P   98 (334)
T ss_pred             eeEEEECcHhhHHH---HHHHHHHHHHhCCCCCE--EEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCC--c
Confidence            33899999999754   22234454322111111  344443  444544444332    33222222111111110  0


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--C-eeEe-ccCCC----------CCCCCCCC
Q 016761          181 MTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--D-FQVA-CDHFL----------GSPDDVQN  245 (383)
Q Consensus       181 gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--D-i~is-sD~~~----------g~~~~~~~  245 (383)
                      .++.+...+..|+ ++-++|...+ .||+.|+||+-.+|--+.+..+-  + +... .|...          +.+.....
T Consensus        99 ~~~~~s~atY~Rl-~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~  177 (334)
T PRK15171         99 STKNWTYATYFRF-IIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASG  177 (334)
T ss_pred             ccCcCCHHHHHHH-HHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCcccccc
Confidence            1222334444454 3445554456 59999999999998888775432  2 2222 23211          11111134


Q ss_pred             CCceEEEEEeeCh-HHHHHHHHHHHHHhcC-----CCCCChHHHHHHHcCCCCCCCCcEEEEccccc-cC-Ccc-ccC--
Q 016761          246 RPNGGFNHVKSNN-RSIEFYRFWYASRETY-----PGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-FG-GLC-EPS--  314 (383)
Q Consensus       246 ~~NtGf~yvRst~-~ti~f~~~W~~~~~~~-----p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F~-gf~-q~~--  314 (383)
                      .+|+|++++--.. |-..+.+.+.+.....     -...||++||.++..        ++..||..+ +. +.. +..  
T Consensus       178 YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~--------~~~~L~~~wN~~~~~~~~~~~~  249 (334)
T PRK15171        178 YFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAG--------KVKFIDAKYNTQFSLNYELKDS  249 (334)
T ss_pred             ceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcC--------CeEECCHhhCCccchhHHHHhc
Confidence            7899999875432 1111222222222211     124799999999843        466676543 11 111 000  


Q ss_pred             --CC-CCceEEEecc
Q 016761          315 --ED-FNVVCTMHAN  326 (383)
Q Consensus       315 --~d-~~~p~~vHaN  326 (383)
                        .. ...|.++|-+
T Consensus       250 ~~~~~~~~p~IIHy~  264 (334)
T PRK15171        250 VINPVNDETVFIHYI  264 (334)
T ss_pred             ccccccCCCEEEEEC
Confidence              01 2468899987

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]

Probab=93.53  E-value=0.72  Score=46.44  Aligned_cols=173  Identities=21%  Similarity=0.240  Sum_probs=95.9

Q ss_pred             EEEEcCccccCC-ChhHHHHHHhhhhccCcccccccEEEEEecHHHHHHHHhcCc--cEEEe--ecCCcCccccccc-cc
Q 016761          109 ILTTLNEAWAAP-DSVIDLFLESFRIGDGTRKLLNHLVIIALDQKAFERCLTLHR--HCFAL--ITDGVDFHQEAYF-MT  182 (383)
Q Consensus       109 IlT~~N~a~a~p-gs~ldlFLeS~r~g~~t~~ll~hllVvAlD~~a~~~c~~~g~--~c~~~--~~~~~d~s~~~~~-gS  182 (383)
                      |+-.+|.+|+.| |..+-.-|++-+    ....-=|+++.-++++=.++.++.-.  .++-.  ..+...+.  ..- -+
T Consensus         5 Iv~a~D~nY~~~~gvsI~SiL~~n~----~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~--~~~~~~   78 (325)
T COG1442           5 IAFAFDKNYLIPAGVSIYSLLEHNR----KIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL--DYPPFT   78 (325)
T ss_pred             EEEEcccccchhHHHHHHHHHHhCc----cccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh--cccccc
Confidence            777889999887 433332233222    11222377888899988888877631  12111  11122221  111 46


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCcCC---CCCeeEeccCCCC----------CCCCCCCCCce
Q 016761          183 PQYLKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLG----------SPDDVQNRPNG  249 (383)
Q Consensus       183 ~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g----------~~~~~~~~~Nt  249 (383)
                      +.|..|+..|.- +-+++...=.+|+.|+|||..++=-+.|.-   +.=+.+.-|.+..          .....+...|+
T Consensus        79 ~~~s~~v~~R~f-iadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNa  157 (325)
T COG1442          79 KRFSKMVLVRYF-LADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNA  157 (325)
T ss_pred             cchHHHHHHHHH-HHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCcc
Confidence            788888888874 445555557799999999999987666532   2222333443321          12234677999


Q ss_pred             EEEEEee-----ChHHHHHHHHHHHHHhcCCCCCChHHHHHHHcC
Q 016761          250 GFNHVKS-----NNRSIEFYRFWYASRETYPGYHDQDVLNIIKFD  289 (383)
Q Consensus       250 Gf~yvRs-----t~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~  289 (383)
                      |++++--     ..-+-.+++--. .....-...||+++|.++++
T Consensus       158 G~llinl~~W~~~~i~~k~i~~~~-~~~~~~~~~DQdiLN~i~~~  201 (325)
T COG1442         158 GVLLINLKLWREENIFEKLIELLK-DKENDLLYPDQDILNMIFED  201 (325)
T ss_pred             ceeeehHHHHHHhhhHHHHHHHHh-ccccccCCccccHHHHHHHh
Confidence            9998732     111112211110 01111125799999999943

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function

Probab=91.91  E-value=0.53  Score=45.71  Aligned_cols=102  Identities=20%  Similarity=0.245  Sum_probs=59.0

Q ss_pred             eEEEecceEEeccCCccCcCCCC--Cee-EeccCCCCCCCCCCCCCceEEEEEee-----ChHHHHHHHHHHHHHh----
Q 016761          205 NFIFTDADIMWFRDPFPRFYPDA--DFQ-VACDHFLGSPDDVQNRPNGGFNHVKS-----NNRSIEFYRFWYASRE----  272 (383)
Q Consensus       205 ~VLfsDvDVVWlRNP~p~f~~~a--Di~-issD~~~g~~~~~~~~~NtGf~yvRs-----t~~ti~f~~~W~~~~~----  272 (383)
                      .||+.|+|||-.+|=-+.+..+-  .+. ...|           ..|+|++++--     +.-+.++++ |.+...    
T Consensus       116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----------yfNsGV~linl~~wr~~~i~~~~~~-~~~~~~~~~~  183 (257)
T cd06429         116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----------SWNPGVNVVNLTEWRRQNVTETYEK-WMELNQEEEV  183 (257)
T ss_pred             eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----------hcccceEEEeHHHHHhccHHHHHHH-HHHHhhhccc
Confidence            69999999999998777775321  122 2222           67999998754     333444443 433222    


Q ss_pred             cCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc-c-C-Ccccc--CCCCCceEEEecc
Q 016761          273 TYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY-F-G-GLCEP--SEDFNVVCTMHAN  326 (383)
Q Consensus       273 ~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~-F-~-gf~q~--~~d~~~p~~vHaN  326 (383)
                      ......||+++|.++..        ++..||..+ + + |+...  ......|.++|-+
T Consensus       184 ~~~~~~dqd~ln~~~~~--------~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~  234 (257)
T cd06429         184 TLWKLITLPPGLIVFYG--------LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFN  234 (257)
T ss_pred             chhhcCCccHHHHHccC--------eeEECChHHcccCCcccccccccccCCcEEEEEC
Confidence            12334689999988732        345555432 1 1 11111  1223578999976

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family

Probab=90.63  E-value=0.75  Score=44.27  Aligned_cols=126  Identities=16%  Similarity=0.083  Sum_probs=66.9

Q ss_pred             HHHHHHHHcCc-eEEEecceEEeccCCccCcCC---CCCeeEeccCCCCC-----C---------C-CCCCCCceEEEEE
Q 016761          194 DFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLGS-----P---------D-DVQNRPNGGFNHV  254 (383)
Q Consensus       194 ~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g~-----~---------~-~~~~~~NtGf~yv  254 (383)
                      -++..+|...+ .||+.|+|+|...|=-+.+..   ++=+.+..|+-...     .         . ....+.|+|++++
T Consensus        86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmli  165 (248)
T cd06432          86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVV  165 (248)
T ss_pred             HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEE
Confidence            34444887777 699999999988765555532   22122222321100     0         0 1123789999987


Q ss_pred             e-----eChHHHHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEcccccc--CCccccCCCCCceEEEe
Q 016761          255 K-----SNNRSIEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDTAYF--GGLCEPSEDFNVVCTMH  324 (383)
Q Consensus       255 R-----st~~ti~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~F--~gf~q~~~d~~~p~~vH  324 (383)
                      -     ...-+-++.+ .++.+...+   ..+||+++|.++..       .++..||..+-  -++|--.+ ..++-++|
T Consensus       166 NL~~wR~~~i~~~~~~-~~~~l~~~~~~l~~~DQDiLN~v~~~-------~~i~~Lp~~w~~~~~~~~~~~-~~~~~~~~  236 (248)
T cd06432         166 DLKRFRRIAAGDRLRG-QYQQLSQDPNSLANLDQDLPNNMQHQ-------VPIFSLPQEWLWCETWCSDES-KKKAKTID  236 (248)
T ss_pred             eHHHHHHHhHHHHHHH-HHHHHhcCCCccccCCchhhHHHhcc-------CCeEECChHHHHHHHHhcccc-cCccceee
Confidence            4     3332222111 111222222   24799999999832       34788887761  13333222 44577777


Q ss_pred             cccc
Q 016761          325 ANCC  328 (383)
Q Consensus       325 aN~~  328 (383)
                      --|-
T Consensus       237 ~~~~  240 (248)
T cd06432         237 LCNN  240 (248)
T ss_pred             cccC
Confidence            6443

C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function

Probab=88.81  E-value=2.3  Score=40.34  Aligned_cols=94  Identities=23%  Similarity=0.261  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHcCceEEEecceEEeccCCccC----cCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHH
Q 016761          186 LKMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPR----FYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSI  261 (383)
Q Consensus       186 ~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~----f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti  261 (383)
                      ...+.+|--++..+|..===|||.|+||.- =||-..    +.+..|++.- |-+.      ...+.+|-|++|.|+.++
T Consensus        25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fy-dR~~------n~Ei~agsYlvkNT~~~~   96 (222)
T PF03314_consen   25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFY-DRFF------NWEIAAGSYLVKNTEYSR   96 (222)
T ss_pred             hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEE-eccc------chhhhhccceeeCCHHHH
Confidence            456778888888998754349999999863 478544    4578888765 3221      345689999999999999


Q ss_pred             HHHHHHHHHHhcCCC---CCChHHHHHHH
Q 016761          262 EFYRFWYASRETYPG---YHDQDVLNIIK  287 (383)
Q Consensus       262 ~f~~~W~~~~~~~p~---~~DQ~vfN~l~  287 (383)
                      +|++.|...-.+-|.   ..|-.++...+
T Consensus        97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~~L  125 (222)
T PF03314_consen   97 DFLKEWADYEFKLPNSFHGTDNGALHIFL  125 (222)
T ss_pred             HHHHHHhhhCccCCCccccCccHHHHHHH
Confidence            999999876445553   25777777765

>PLN02829 Probable galacturonosyltransferase

Probab=84.74  E-value=4  Score=44.36  Aligned_cols=161  Identities=17%  Similarity=0.173  Sum_probs=86.7

Q ss_pred             cccccHHHH-HHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCC---CCeeEeccCCC-----------CCC-
Q 016761          178 AYFMTPQYL-KMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPD---ADFQVACDHFL-----------GSP-  240 (383)
Q Consensus       178 ~~~gS~~f~-~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~-----------g~~-  240 (383)
                      ..|..+.|. .++..|+ +|-+++. .+ .||+.|.|||-.+|--+.+..+   .-+....|+..           .++ 
T Consensus       432 ~k~r~p~ylS~lnY~Rf-yLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~  509 (639)
T PLN02829        432 LKYRNPKYLSILNHLRF-YLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPL  509 (639)
T ss_pred             cccCCcchhhHHHHHHH-HHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchH
Confidence            345555554 3344554 3445555 34 6999999999999988776432   21222233311           111 


Q ss_pred             ----C-CCCCCCceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHHHHH--cCCCCCCCCcEEEEccccc-c
Q 016761          241 ----D-DVQNRPNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLNIIK--FDPSIMDIGLKIKFLDTAY-F  307 (383)
Q Consensus       241 ----~-~~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~--~~~~~~~~gl~v~~L~~~~-F  307 (383)
                          . ...-..|+|++++     |-..-|..+. .|++. ......|||.++|-++  -.+       +++.||..+ +
T Consensus       510 i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~Ll~F~g-------~i~~LD~rWNv  580 (639)
T PLN02829        510 ISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGLITFWK-------RTYPLDRSWHV  580 (639)
T ss_pred             hhhccCCcccceecceEEEeHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHHHHhcC-------ceEecChhhee
Confidence                0 1123578999976     5555555554 67643 2233569999999754  121       244454433 2


Q ss_pred             -C-Cccc--cCCCCCceEEEeccccCCc---ccHHHHHHHHHHHHHHhhcCCc
Q 016761          308 -G-GLCE--PSEDFNVVCTMHANCCYGL---NSKLIDLRIMLQDWKYFLSLPL  353 (383)
Q Consensus       308 -~-gf~q--~~~d~~~p~~vHaN~~~G~---~~K~~rLR~~l~dW~~~~~~~~  353 (383)
                       + |+-.  ..++...+.++|.|-. ++   +..++++|   +.|.+|.....
T Consensus       581 ~GLGy~~~v~~~~i~~aaIIHynG~-~KPWle~~i~~yr---~lW~kYl~~~~  629 (639)
T PLN02829        581 LGLGYNPNVNQRDIERAAVIHYNGN-MKPWLEIGIPKYR---NYWSKYVDYDQ  629 (639)
T ss_pred             cCCCCCcccchhcccCCeEEEECCC-CCccccCCcccch---HHHHHHHhcCc
Confidence             2 1111  1245667899997742 12   22233444   46888866433

>PLN02718 Probable galacturonosyltransferase

Probab=84.68  E-value=3.5  Score=44.71  Aligned_cols=152  Identities=14%  Similarity=0.120  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHcCceEEEecceEEeccCCccCcCCC---CCeeEeccCCCC--------------CC-----CC-C
Q 016761          187 KMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFYPD---ADFQVACDHFLG--------------SP-----DD-V  243 (383)
Q Consensus       187 ~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRNP~p~f~~~---aDi~issD~~~g--------------~~-----~~-~  243 (383)
                      ..+..|+.+-. ++..==.||+.|+|||-.+|--+.+.-+   .-+.+..|+..+              +|     .+ .
T Consensus       403 ~~~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~  481 (603)
T PLN02718        403 ALNHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPK  481 (603)
T ss_pred             HHHHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCC
Confidence            44455554433 4442127999999999999998886432   112223343221              00     00 0


Q ss_pred             CCCCceEEEEE-----eeChHHHHHHHHHHHHHhcCCCCCChHHHH---HHHcCCCCCCCCcEEEEccccc--cC-Cccc
Q 016761          244 QNRPNGGFNHV-----KSNNRSIEFYRFWYASRETYPGYHDQDVLN---IIKFDPSIMDIGLKIKFLDTAY--FG-GLCE  312 (383)
Q Consensus       244 ~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~~~p~~~DQ~vfN---~l~~~~~~~~~gl~v~~L~~~~--F~-gf~q  312 (383)
                      .-..|+|++.+     |-..-|.. +..|+..... ...|||+++|   .++ .+       ++..||..+  .+ |+..
T Consensus       482 ~CyfNsGVlLIDLk~WReenITe~-~~~~l~~n~~-~~l~dqdaLpp~LlvF-~g-------ri~~LD~rWNv~gLG~~~  551 (603)
T PLN02718        482 ACTWAFGMNLFDLEEWRRQKLTSV-YHKYLQLGVK-RPLWKAGSLPIGWLTF-YN-------QTVALDKRWHVLGLGHES  551 (603)
T ss_pred             ccccccceEEEeHHHHHhcChHHH-HHHHHHhccC-ccccCcccccHHHHHh-cC-------ceeecChHHhccCccccc
Confidence            12467899965     44444444 4456543222 2569999988   444 21       345555443  22 2111


Q ss_pred             --cCCCCCceEEEecccc--CCcccHHHHHHHHHHHHHHhhcCC
Q 016761          313 --PSEDFNVVCTMHANCC--YGLNSKLIDLRIMLQDWKYFLSLP  352 (383)
Q Consensus       313 --~~~d~~~p~~vHaN~~--~G~~~K~~rLR~~l~dW~~~~~~~  352 (383)
                        ...+...|.++|-|-.  --.+..+.+.|+   .|++|+...
T Consensus       552 ~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~---~W~k~v~~~  592 (603)
T PLN02718        552 GVGASDIEQAAVIHYDGVMKPWLDIGIGKYKR---YWNIHVPYH  592 (603)
T ss_pred             cccccccCCCEEEEECCCCCccccCChhhHHH---HHHhhcCCC
Confidence              1234568999997642  112333455554   599996643

>PLN02867 Probable galacturonosyltransferase

Probab=84.45  E-value=4  Score=43.69  Aligned_cols=158  Identities=18%  Similarity=0.275  Sum_probs=81.1

Q ss_pred             cccHHHHHHH-HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--C-eeEeccCC--------------C--C
Q 016761          180 FMTPQYLKMM-WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--D-FQVACDHF--------------L--G  238 (383)
Q Consensus       180 ~gS~~f~~m~-w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--D-i~issD~~--------------~--g  238 (383)
                      +.++.|..++ ..|+ +|-+++. -+ .||+.|.|||-.+|--+.+..|-  - +..-.|.+              .  .
T Consensus       322 ~~~pkylS~lnYlRf-lIPeLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfs  399 (535)
T PLN02867        322 ALSPSCLSLLNHLRI-YIPELFP-DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFS  399 (535)
T ss_pred             hcChhhhhHHHHHHH-HHHHHhh-ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhcccc
Confidence            3455665443 4555 3445555 33 69999999999998887775321  1 11111211              0  0


Q ss_pred             CC------CCCCCCCceEEEEE-----eeChHHHHHHHHHHHHHh-cCCCCCChHHHHHHH--cCCCCCCCCcEEEEccc
Q 016761          239 SP------DDVQNRPNGGFNHV-----KSNNRSIEFYRFWYASRE-TYPGYHDQDVLNIIK--FDPSIMDIGLKIKFLDT  304 (383)
Q Consensus       239 ~~------~~~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~~-~~p~~~DQ~vfN~l~--~~~~~~~~gl~v~~L~~  304 (383)
                      +|      ....-+.|+|++.+     |-.+-|.++ ..|++.-. .....+||+++|..+  -.       =++..||.
T Consensus       400 np~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~-~~~Le~n~~~~~~l~dqd~LN~~LlvF~-------g~v~~LD~  471 (535)
T PLN02867        400 HPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAY-HKWLKLSLNSGLQLWQPGALPPALLAFK-------GHVHPIDP  471 (535)
T ss_pred             chhhhccCCCCCcceecceeeeeHHHHHHhcHHHHH-HHHHHhchhcccccccccccchHHHHhc-------CcEEECCh
Confidence            11      01123578999986     444444333 34544322 123468999999732  12       13556654


Q ss_pred             cc-c-C-Ccccc--C-CCCCceEEEecccc--CCcccHHHHHHHHHHHHHHhhc
Q 016761          305 AY-F-G-GLCEP--S-EDFNVVCTMHANCC--YGLNSKLIDLRIMLQDWKYFLS  350 (383)
Q Consensus       305 ~~-F-~-gf~q~--~-~d~~~p~~vHaN~~--~G~~~K~~rLR~~l~dW~~~~~  350 (383)
                      .+ + + |+...  . .....|.++|-|-.  --++.-++++|+   .|.+|..
T Consensus       472 rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~---~W~kyl~  522 (535)
T PLN02867        472 SWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRS---LWYRHVN  522 (535)
T ss_pred             hhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchhH---HHHHhcC
Confidence            43 2 2 22111  1 22467999998732  011223345544   6888843

>PLN02659 Probable galacturonosyltransferase

Probab=83.43  E-value=5.2  Score=42.79  Aligned_cols=157  Identities=20%  Similarity=0.261  Sum_probs=82.2

Q ss_pred             cccHHHHHHH-HHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCC--CeeE-eccC-----CC-----------C
Q 016761          180 FMTPQYLKMM-WKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDA--DFQV-ACDH-----FL-----------G  238 (383)
Q Consensus       180 ~gS~~f~~m~-w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~a--Di~i-ssD~-----~~-----------g  238 (383)
                      +..+.|..|. ..|+. +=++|. .+ .||+.|.|||-.+|=-+.+..|-  .+.. ..|+     +.           +
T Consensus       321 ~~~p~ylS~~nY~RL~-IPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s  398 (534)
T PLN02659        321 ALSPKYNSVMNHIRIH-LPELFP-SLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFS  398 (534)
T ss_pred             cCCccceeHHHHHHHH-HHHHhh-hcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhccc
Confidence            4566666544 45543 444444 23 69999999999988777664321  1222 2232     10           0


Q ss_pred             CCC-----C-CCCCCceEEEEE-----eeChHHHHHHHHHHHHH-hcCCCCCChHHHH---HHHcCCCCCCCCcEEEEcc
Q 016761          239 SPD-----D-VQNRPNGGFNHV-----KSNNRSIEFYRFWYASR-ETYPGYHDQDVLN---IIKFDPSIMDIGLKIKFLD  303 (383)
Q Consensus       239 ~~~-----~-~~~~~NtGf~yv-----Rst~~ti~f~~~W~~~~-~~~p~~~DQ~vfN---~l~~~~~~~~~gl~v~~L~  303 (383)
                      +|.     + ..-+.|+|++++     |-..-|.++++ |++.. ...-..|||+++|   .++ .+       ++..||
T Consensus       399 ~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~-~l~~n~~~~l~l~DQdaLp~~LivF-~g-------~v~~LD  469 (534)
T PLN02659        399 HPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHH-WLEENLKSDLSLWQLGTLPPGLIAF-HG-------HVHVID  469 (534)
T ss_pred             chhhhhccCccccceecceeEeeHHHHHhcChHHHHHH-HHHhcccccccccccccchHHHHHh-cC-------CEEECC
Confidence            110     0 122568899976     44455555443 44322 1223468999995   444 22       355555


Q ss_pred             ccc--cCCcccc---CCCCCceEEEecc-----ccCCcccHHHHHHHHHHHHHHhhcCCc
Q 016761          304 TAY--FGGLCEP---SEDFNVVCTMHAN-----CCYGLNSKLIDLRIMLQDWKYFLSLPL  353 (383)
Q Consensus       304 ~~~--F~gf~q~---~~d~~~p~~vHaN-----~~~G~~~K~~rLR~~l~dW~~~~~~~~  353 (383)
                      ..+  ++-..+.   ..+...|.++|-|     |...   -++..|   ..|.+|.....
T Consensus       470 ~rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~~~---~~~~yr---~~W~kYl~~s~  523 (534)
T PLN02659        470 PFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDI---AFPQLR---PLWAKYIDSSD  523 (534)
T ss_pred             hhheecCCcccccccccccCCcEEEEECCCCCccccc---cCCcch---hHHHHHhccCC
Confidence            433  2211111   1244679999976     3311   123333   46988876443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	383
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 3e-07
 Identities = 51/374 (13%), Positives = 109/374 (29%), Gaps = 112/374 (29%)

Query: 30  LTESAARPRALFSVASIL-------------LTC-ILVYGVADTLRFLPLSNSFSSFPSI 75
           L +S      L     +L             L+C IL+     T RF  +++  S+  + 
Sbjct: 237 LLKSKPYENCLL----VLLNVQNAKAWNAFNLSCKILL-----TTRFKQVTDFLSAATTT 287

Query: 76  FPSSALDNDSLQVSE-ENRLETVLNNAAMQDRTVILTTLNEAWAAPDSVIDLFLESFRIG 134
             S    + +L   E ++ L   L+         +LTT       P   + +  ES R G
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT------NP-RRLSIIAESIRDG 340

Query: 135 DGTRKLLNHLVIIALDQKAFERCL-----TLHRHCF---ALITDGVDFHQEAYFMTPQYL 186
             T     H+    L     E  L       +R  F   ++             +    L
Sbjct: 341 LATWDNWKHVNCDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAH-------IPTILL 392

Query: 187 KMMWKRIDFLRTVLEMGYNFIFTDADIMWFRDPFPRFY--PDADFQVACD-------H-- 235
            ++W  +   ++ + +  N +   + +   + P       P    ++          H  
Sbjct: 393 SLIWFDVI--KSDVMVVVNKLHKYSLV--EKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 236 FLGSPDDVQNRPNGGFNHVKSNNRSIEFYRFWYASRETYPGYHDQDVLNIIKFD--PSI- 292
            +   +  +   +        +      Y + +       G+H +++ +  +      + 
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQ-----YFYSHI------GHHLKNIEHPERMTLFRMVF 497

Query: 293 MD---IGLKIKFLDTAYFGGLCEPSEDFNVVCTMHANCCYGLNSKLIDLRI--------- 340
           +D   +  KI+   TA+                   N    + + L  L+          
Sbjct: 498 LDFRFLEQKIRHDSTAW-------------------NASGSILNTLQQLKFYKPYICDND 538

Query: 341 -----MLQDWKYFL 349
                ++     FL
Sbjct: 539 PKYERLVNAILDFL 552

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	383
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	97.77
3u2u_A	263	Glycogenin-1, GN-1, GN1; structural genomics, stru	97.23
1g9r_A	311	Glycosyl transferase; alpha-beta structure; HET: U	96.86
3tzt_A	276	Glycosyl transferase family 8; structural genomics	96.53

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=97.77  E-value=0.00012  Score=71.82  Aligned_cols=160  Identities=14%  Similarity=0.106  Sum_probs=90.6

Q ss_pred             EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEec---HHHHHHHHhcCccEEEeecCCcCcccccccccHHH
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIALD---QKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQY  185 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAlD---~~a~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f  185 (383)
                      |+.++|.+|...   +-..+.|++... +.   ..++|+..|   ++..+.+++.+........-..............+
T Consensus         7 vt~~~d~~Yl~~---a~vl~~SL~~~~-s~---~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~   79 (333)
T 1ll2_A            7 VTLTTNDAYAKG---ALVLGSSLKQHR-TS---RRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPE   79 (333)
T ss_dssp             EEEESSHHHHHH---HHHHHHHHHHTT-CC---SEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGG
T ss_pred             EEEEeCHHHHHH---HHHHHHHHHHhC-CC---CCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccc
Confidence            444578888531   112356776521 21   345555443   56677777777654444321111110000000112


Q ss_pred             HHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHHHHH
Q 016761          186 LKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFY  264 (383)
Q Consensus       186 ~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti~f~  264 (383)
                      ...++.|+.+.. +  ..| .||+.|+|++.++|+-+.|..+ .+....|.      ..+..+|+|++.++++..+-   
T Consensus        80 ~~~t~~Kl~i~~-l--~~ydrvlYLDaD~lv~~di~eLf~~~-~~aAv~d~------~~~~~fNsGvmlin~~~~~~---  146 (333)
T 1ll2_A           80 LGVTLTKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFERE-ELSAAPDP------GWPDCFNSGVFVYQPSVETY---  146 (333)
T ss_dssp             GHHHHHHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSC-SSEEEECS------SSTTSEEEEEEEECCCHHHH---
T ss_pred             hHHHHHHHHHhH-h--cCCCeEEEEeCCEEeccCHHHHhCCC-ceeEEecC------CCCcceeeeEEEEeCCHHHH---
Confidence            246777877664 2  345 5999999999999998888544 33333342      12457899999999985443   


Q ss_pred             HHHHHHHhcCC--CCCChHHHHHHHc
Q 016761          265 RFWYASRETYP--GYHDQDVLNIIKF  288 (383)
Q Consensus       265 ~~W~~~~~~~p--~~~DQ~vfN~l~~  288 (383)
                      +.+.+......  ...||++||.+..
T Consensus       147 ~~l~~~~~~~~~~~~~DQ~~LN~~f~  172 (333)
T 1ll2_A          147 NQLLHVASEQGSFDGGDQGLLNTFFN  172 (333)
T ss_dssp             HHHHHHHHHTCCTTSSHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence            33333322221  3479999999884

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A

Probab=97.23  E-value=0.00071  Score=64.34  Aligned_cols=160  Identities=16%  Similarity=0.169  Sum_probs=90.3

Q ss_pred             EEEEE-cCccccCCChhHHHHHHhhhhccCcccccccEEEEE---ecHHHHHHHHhcCccEEEeecCCcCccc---cccc
Q 016761          108 VILTT-LNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA---LDQKAFERCLTLHRHCFALITDGVDFHQ---EAYF  180 (383)
Q Consensus       108 VIlT~-~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA---lD~~a~~~c~~~g~~c~~~~~~~~d~s~---~~~~  180 (383)
                      ..+|. +|.+|...   .-..+.|++... +.   ..++|+.   ++++..+.+++.+......+.  .+...   ....
T Consensus         6 AyvTl~td~~Yl~g---a~vL~~SL~~~~-s~---~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~--l~~~~~~~~~~~   76 (263)
T 3u2u_A            6 AFVTLTTNDAYAKG---ALVLGSSLKQHR-TT---RRLVVLATPQVSDSMRKVLETVFDEVIMVDV--LDSGDSAHLTLM   76 (263)
T ss_dssp             EEEEEESSHHHHHH---HHHHHHHHHHTT-CC---SEEEEEECTTSCHHHHHHHHHHSSEEEECCC--CCCCCHHHHHHT
T ss_pred             EEEEEEECHHHHHH---HHHHHHHHHHhC-CC---CCEEEEecCCCCHHHHHHHHHcCCeEEEeee--cCCcchhhhhhh
Confidence            33443 57777531   122467776532 22   1234443   456777888888765544432  11110   0011


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChH
Q 016761          181 MTPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNR  259 (383)
Q Consensus       181 gS~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~  259 (383)
                      ..+.+ ..++.|..+... +  .| .||+.|+|++.++|.-+.|..+ .+....|..      .+..+|+|++.+.++..
T Consensus        77 ~rp~~-~~~~~kl~~~~l-~--~~~~vlylD~D~~v~~~~~~Lf~~~-~~aA~~d~~------~~~~fNsGv~li~p~~~  145 (263)
T 3u2u_A           77 KRPEL-GVTLTKLHCWSL-T--QYSKCVFMDADTLVLANIDDLFDRE-ELSAAPDPG------WPDCFNSGVFVYQPSVE  145 (263)
T ss_dssp             TCTTG-GGGGGGGGGGGC-T--TCSEEEEECTTEEECSCCGGGGGSC-SSEEEECTT------STTSEEEEEEEECCCHH
T ss_pred             cCcch-hHHhHHHHhccc-c--CcceEEEEcCCEeeccCHHHHhCCC-cceEeccCC------CCccccCeEEEEcccHH
Confidence            11222 345666665542 2  46 4999999999999998888554 344444421      23578999999999865


Q ss_pred             HHHHHHHHHHHHhcCCCCCChHHHHHHHc
Q 016761          260 SIEFYRFWYASRETYPGYHDQDVLNIIKF  288 (383)
Q Consensus       260 ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~  288 (383)
                      +-+-+-+........ ...||+++|.++.
T Consensus       146 ~~~~l~~~~~~~~~~-~~~DQd~LN~~f~  173 (263)
T 3u2u_A          146 TYNQLLHLASEQGSF-DGGDQGILNTFFS  173 (263)
T ss_dssp             HHHHHHHHHHHHCCT-TSSHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCCC-CcccHHHHHHHhc
Confidence            433333333222222 3479999999984

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*

Probab=96.86  E-value=0.0017  Score=62.40  Aligned_cols=181  Identities=13%  Similarity=0.155  Sum_probs=93.6

Q ss_pred             EEEEcCccccCCChhHHHHHHhh-hhccCcccccccEEEEEec--HHHHHHHHhc----CccEEEeecCCcCcccccccc
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESF-RIGDGTRKLLNHLVIIALD--QKAFERCLTL----HRHCFALITDGVDFHQEAYFM  181 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~-r~g~~t~~ll~hllVvAlD--~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~g  181 (383)
                      |+.++|.+|..+   +-..+.|+ ... ....  -++.|++.|  ++..+.+++.    +............+...... 
T Consensus         3 I~~~~d~~Y~~~---~~vli~Sl~l~~-~~~~--~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~-   75 (311)
T 1g9r_A            3 IVFAADDNYAAY---LCVAAKSVEAAH-PDTE--IRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLN-   75 (311)
T ss_dssp             EEEEECGGGHHH---HHHHHHHHHHTC-TTSC--CEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCC-
T ss_pred             EEEECCHhHHHH---HHHHHHHHHHHc-CCCC--ceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccc-
Confidence            556688888542   22346677 321 1122  144555544  6666666654    43333233221122110000 


Q ss_pred             cHHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCC---CCCeeEeccCCCC-CC--------CCCCCCCc
Q 016761          182 TPQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLG-SP--------DDVQNRPN  248 (383)
Q Consensus       182 S~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g-~~--------~~~~~~~N  248 (383)
                      .+.+...+..|+. +-+++. .| .||+.|+|++-++|.-+.+.-   +.-+....|++.. .+        .......|
T Consensus        76 ~~~~s~~~y~Rl~-l~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfN  153 (311)
T 1g9r_A           76 IRHISITTYARLK-LGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFN  153 (311)
T ss_dssp             CTTCCGGGGGGGG-HHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEE
T ss_pred             cccCCHHHHHHHH-HHHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEe
Confidence            0111123334443 344443 44 499999999999999887753   2334444554321 00        01235789


Q ss_pred             eEEEEEeeCh----HHHHHHHHHHHHHhcCCCCCChHHHHHHHcCCCCCCCCcEEEEccccc
Q 016761          249 GGFNHVKSNN----RSIEFYRFWYASRETYPGYHDQDVLNIIKFDPSIMDIGLKIKFLDTAY  306 (383)
Q Consensus       249 tGf~yvRst~----~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~~~  306 (383)
                      +|++.+..+.    ...+-+..|.......-...||+++|.+...        ++..||..+
T Consensus       154 sGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~--------~~~~Lp~~w  207 (311)
T 1g9r_A          154 AGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG--------GVCYANSRF  207 (311)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT--------SEEEECGGG
T ss_pred             eeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC--------CEEEcChhh
Confidence            9999998653    1223333454433222235799999998832        356676543

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=96.53  E-value=0.009  Score=56.67  Aligned_cols=180  Identities=18%  Similarity=0.156  Sum_probs=84.2

Q ss_pred             EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEe--cHHHHHHHHhc----CccEEEeecCCcCccccccccc
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIAL--DQKAFERCLTL----HRHCFALITDGVDFHQEAYFMT  182 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAl--D~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~gS  182 (383)
                      |+.++|..|..+   +-.-+.|+........+  ++.|+..  +++..+.+++.    +............+...  -.+
T Consensus         8 I~~~~d~~Y~~~---~~v~i~Sl~~~~~~~~~--~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~--~~~   80 (276)
T 3tzt_A            8 LLLTLDENYIPQ---MKVLMTSIYINNPGRIF--DVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFA--KVT   80 (276)
T ss_dssp             EEEECCGGGHHH---HHHHHHHHHHHSTTCCE--EEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred             EEEEeCHhHHHH---HHHHHHHHHHhCCCCce--EEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcC--ccc
Confidence            678889998653   22235566442111121  2334443  34544444432    33222222221112110  112


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCc-eEEEecceEEeccCCccCcCC---CCCeeEeccCCCCCC---------CCCCCCCce
Q 016761          183 PQYLKMMWKRIDFLRTVLEMGY-NFIFTDADIMWFRDPFPRFYP---DADFQVACDHFLGSP---------DDVQNRPNG  249 (383)
Q Consensus       183 ~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRNP~p~f~~---~aDi~issD~~~g~~---------~~~~~~~Nt  249 (383)
                      +.|...+..|+. +-+++...+ .||+.|+|++.++|.-+.+.-   +.-+....|+.....         .......|+
T Consensus        81 ~~~s~~~~~rl~-~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNs  159 (276)
T 3tzt_A           81 DRYPKEMYYRLL-AGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNS  159 (276)
T ss_dssp             ---CHHHHHHHT-HHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEE
T ss_pred             cccCHHHHHHHH-HHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEe
Confidence            234445555543 344554445 599999999999999888753   233544455533210         011367899


Q ss_pred             EEEEEeeCh-HHHHHHHHHHHHHhcCC---CCCChHHHHHHHcCCCCCCCCcEEEEccc
Q 016761          250 GFNHVKSNN-RSIEFYRFWYASRETYP---GYHDQDVLNIIKFDPSIMDIGLKIKFLDT  304 (383)
Q Consensus       250 Gf~yvRst~-~ti~f~~~W~~~~~~~p---~~~DQ~vfN~l~~~~~~~~~gl~v~~L~~  304 (383)
                      |++.+..+. |-..+.+.+.+...+++   ...||++||.++..        ++..||.
T Consensus       160 GV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~--------~~~~Lp~  210 (276)
T 3tzt_A          160 GLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGD--------RIYPLDD  210 (276)
T ss_dssp             EEEEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGG--------GEEEEEH
T ss_pred             eEEEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhC--------CEEECCc
Confidence            999998764 11111222222222222   25899999999832        4788885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	383
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	97.46
d1ll2a_	263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	97.41

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.46  E-value=8.1e-05  Score=67.89  Aligned_cols=171  Identities=14%  Similarity=0.136  Sum_probs=90.1

Q ss_pred             EEEEcCccccCCChhHHHHHHhhhhccCcccccccEEEEE--ecHHHHHHHHhc----CccEEEeecCCcCccccccccc
Q 016761          109 ILTTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIA--LDQKAFERCLTL----HRHCFALITDGVDFHQEAYFMT  182 (383)
Q Consensus       109 IlT~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvA--lD~~a~~~c~~~----g~~c~~~~~~~~d~s~~~~~gS  182 (383)
                      |+.++|.+|..+   +-..+.|+........  -++.|+.  +.++..+.+.+.    +..+...+....++.... ...
T Consensus         3 Iv~~~D~nY~~~---~~~~i~SL~~~~~~~~--~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~-~~~   76 (282)
T d1ga8a_           3 IVFAADDNYAAY---LCVAAKSVEAAHPDTE--IRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFP-LNI   76 (282)
T ss_dssp             EEEEECGGGHHH---HHHHHHHHHHHCTTSC--CEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTTSC-CCC
T ss_pred             EEEECCHHHHHH---HHHHHHHHHHHCcCCC--EEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcccc-ccc
Confidence            566789998542   2234567653211111  1344444  335555555443    334433333222222100 011


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcC---CCCCeeEeccCCCCC---------CCCCCCCCce
Q 016761          183 PQYLKMMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFY---PDADFQVACDHFLGS---------PDDVQNRPNG  249 (383)
Q Consensus       183 ~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~---~~aDi~issD~~~g~---------~~~~~~~~Nt  249 (383)
                      +.+..++..|+ ++-++|. +|+ +|+.|+|++-++|+-+.+.   .+.-+....|.....         -.+....+|+
T Consensus        77 ~~~s~~~y~Rl-~l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNs  154 (282)
T d1ga8a_          77 RHISITTYARL-KLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNA  154 (282)
T ss_dssp             TTCCGGGGGGG-GHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEE
T ss_pred             cccCHHHHHHH-HHhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhCCCCCCceeec
Confidence            12234455565 3556665 564 9999999999999988774   344455555643211         0123466899


Q ss_pred             EEEEEee-----ChHHHHHHHHHHHHHhcCCCCCChHHHHHHHc
Q 016761          250 GFNHVKS-----NNRSIEFYRFWYASRETYPGYHDQDVLNIIKF  288 (383)
Q Consensus       250 Gf~yvRs-----t~~ti~f~~~W~~~~~~~p~~~DQ~vfN~l~~  288 (383)
                      |+|.+-.     ..-+.++++ |.+.....-...||++||.++.
T Consensus       155 GVml~n~~~~r~~~~~~~~~~-~~~~~~~~~~~~DQd~LN~~f~  197 (282)
T d1ga8a_         155 GVLLINLKKWRRHDIFKMSSE-WVEQYKDVMQYQDQDILNGLFK  197 (282)
T ss_dssp             EEEEECHHHHTTSCHHHHHHH-HHHHHTTTCSSTHHHHHHHHHT
T ss_pred             ceeeechhhhhhhhHHHHHHH-HHHhcccCcccCchhHHHHHhc
Confidence            9999932     222333333 3333222223589999999883

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.41  E-value=0.00044  Score=62.17  Aligned_cols=160  Identities=14%  Similarity=0.091  Sum_probs=97.2

Q ss_pred             EEcCccccCCChhHHHHHHhhhhccCcccccccEEEEEe---cHHHHHHHHhcCccEEEeecCCcCcccccccccHHHHH
Q 016761          111 TTLNEAWAAPDSVIDLFLESFRIGDGTRKLLNHLVIIAL---DQKAFERCLTLHRHCFALITDGVDFHQEAYFMTPQYLK  187 (383)
Q Consensus       111 T~~N~a~a~pgs~ldlFLeS~r~g~~t~~ll~hllVvAl---D~~a~~~c~~~g~~c~~~~~~~~d~s~~~~~gS~~f~~  187 (383)
                      ..+|.+|+-+   +-..+.|++... +.   ..++|+..   .++..+.+++.+..+...+.-..............+..
T Consensus         9 ~~t~d~Yl~~---a~vl~~SL~~~~-~~---~~~vvl~~~~i~~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~   81 (263)
T d1ll2a_           9 LTTNDAYAKG---ALVLGSSLKQHR-TS---RRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELG   81 (263)
T ss_dssp             EESSHHHHHH---HHHHHHHHHHTT-CC---SEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGH
T ss_pred             EEeCHHHHHH---HHHHHHHHHHHC-CC---CCEEEEECCCCCHHHHHHHHHhCCcceeEEeecCcchhhhhhhccccch
Confidence            3368888531   223466776531 11   23455544   37778888888888776654111111111112223455


Q ss_pred             HHHHHHHHHHHHHHcCce-EEEecceEEeccCCccCcCCCCCeeEeccCCCCCCCCCCCCCceEEEEEeeChHHHHHHHH
Q 016761          188 MMWKRIDFLRTVLEMGYN-FIFTDADIMWFRDPFPRFYPDADFQVACDHFLGSPDDVQNRPNGGFNHVKSNNRSIEFYRF  266 (383)
Q Consensus       188 m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRNP~p~f~~~aDi~issD~~~g~~~~~~~~~NtGf~yvRst~~ti~f~~~  266 (383)
                      .++.|+.+.. +  ..|+ ||+.|+|++-++|+-+.|..+.-..+ .|.      ......|+|++.+.++.....-+..
T Consensus        82 ~ty~Kl~i~~-l--~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~-~~~------~~~~~~nsGv~l~~p~~~~~~~i~~  151 (263)
T d1ll2a_          82 VTLTKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFEREELSAA-PDP------GWPDCFNSGVFVYQPSVETYNQLLH  151 (263)
T ss_dssp             HHHHHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSCSSEEE-ECS------SSTTSEEEEEEEECCCHHHHHHHHH
T ss_pred             hhhHHHHHhh-h--cccceEEEeCCCEEEecCHHHHhcCCcccee-ccC------CCcccccCCcEEECccHHHHHHHHH
Confidence            6777876654 3  3454 99999999999999999865432222 221      1245789999999999987776665


Q ss_pred             HHHHHhcCCCCCChHHHHHHHc
Q 016761          267 WYASRETYPGYHDQDVLNIIKF  288 (383)
Q Consensus       267 W~~~~~~~p~~~DQ~vfN~l~~  288 (383)
                      ........+ ..||.++|..+.
T Consensus       152 ~~~~~~~~~-~~dq~~ln~~~~  172 (263)
T d1ll2a_         152 VASEQGSFD-GGDQGLLNTFFN  172 (263)
T ss_dssp             HHHHTCCTT-SSHHHHHHHHTT
T ss_pred             HHHhhCCCC-hhhhhHHHHHHH
Confidence            543332332 479999999873