Citrus Sinensis ID: 016791

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEcEEcccccccccccccEEEEccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHccccccEEEEEcccccccccccccccccccccEEcccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
mesadsstggspqpnlppgfrfhptdEELVVHYLKKkassaplpvsiiaevdlykfdpwelpakatfgeqewyffsprdrkypngarpnraatsgywkatgtdkpvmssgsnqkvGVKKALVfyggkppkgiktnWIMHEYRltdnkvsnkppgcdlgnkknslrldDWVLCRIYkknnlhrplmdhdkddsmddmlgvhippslmissqqqntnlklhmptrganlNSFGALLvnepnffegltshdginnnssnnnngsisshhhhqfaasssskLQVQAMDSLkrtlpssswtdhedvpsggalvnkrfhgennvnddqsiegrtdhhgngssSIATLLsqlpqtppppsihQQAILGSlgdgifrqpyhqlpgmnwys
Flexible Loop (DISEMBL)
mesadsstggspqpnlppGFRFHPTDEELVVHYLKKkassaplpvSIIAEVDLYKFDPWELPAKAtfgeqewyffsprdrkypngarpnraatsgywkatgtdkpvmssgsnqkvGVKKALVFYGGKPPKGIKTNWIMHEYRLTdnkvsnkppgcdlgnkknslrlddWVLCRIYkknnlhrplmdhDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTlpssswtdhedvPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS
Low Complexity Region (SEG)
MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLmdhdkddsmddmLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTshdginnnssnnnngsisshhhhqfaassssKLQVQAMDSLKRTLPSSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIAtllsqlpqtppppsIHQQAILGSLGDGIFRQPYHQLPGMNWYS
Disordered region (IsUnstruct)
*************************DEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSP*************************************VGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKV******CDLGNKKNSLRLDDWVLCRIYKKNNLH*******************************************ANLNSFGALLVNEPNFFEGL******************************************************************************************************************ILGSLGDGIFRQPYHQL*******
Disordered Region (DISOPRED)
*****************PGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNK****************LRLDDWVLCRIYKK*******************************************************************************************************************************************************************************************DGIFRQPYHQLP*MN***
Disordered Region (DISEMBL)
*************PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSI**************************************VPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQL********IHQQAILGSLGDGIFRQPYHQLPGMNWYS
Disordered Region (DISPRO)
**************NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDN****************SLRLDDWVLCRIYKKNN**********************************************NLNSFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPS******************************************SSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	382	2.2.26 [Sep-21-2011]
Q8H4S4	425	NAC transcription factor	yes	no	0.547	0.491	0.663	6e-82
A2YMR0	425	NAC transcription factor	N/A	no	0.547	0.491	0.659	8e-82
Q8GY42	323	NAC transcription factor	no	no	0.510	0.603	0.741	9e-82
A0SPJ9	402	NAC transcription factor	N/A	no	0.882	0.838	0.461	3e-80
A0SPJ6	396	NAC transcription factor	N/A	no	0.434	0.419	0.8	8e-79
A0SPJ4	405	NAC transcription factor	N/A	no	0.434	0.409	0.778	5e-77
A0SPJ3	405	NAC transcription factor	N/A	no	0.434	0.409	0.778	1e-76
D2SMN4	406	NAC transcription factor	N/A	no	0.494	0.465	0.678	2e-76
A0SPJ8	406	NAC transcription factor	N/A	no	0.494	0.465	0.673	9e-76
Q9ZNU2	320	NAC domain-containing pro	no	no	0.528	0.631	0.704	4e-74

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  304 bits (779), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 173/238 (72%), Gaps = 29/238 (12%)

Query: 1   MESADSSTGGSP-------------QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSI 47
           MES DSS+G +P              P LPPGFRFHPTDEELVVHYLKKKA+S PLPV+I
Sbjct: 1   MESPDSSSGSAPPRVLRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTI 60

Query: 48  IAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM 107
           IAEVDLYKFDPW+LP KA FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+M
Sbjct: 61  IAEVDLYKFDPWDLPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIM 120

Query: 108 SSGSN-QKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVS-------NKPPGCDLGN 159
           SSGS  +KVGVKKALVFY GKPPKG+KTNWIMHEYRLTD   S        +PP    G 
Sbjct: 121 SSGSTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGG 180

Query: 160 KKN--SLRLDDWVLCRIYKKNN-LHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNT 214
            K   SLRLDDWVLCRIYKK N         + +DS++D +  + P     SSQQ  T
Sbjct: 181 SKGAVSLRLDDWVLCRIYKKTNKAGAGQRSMECEDSVEDAVAAYAP-----SSQQHAT 233

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  304 bits (778), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 173/238 (72%), Gaps = 29/238 (12%)

Query: 1   MESADSSTGGSP-------------QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSI 47
           MES DSS+G +P              P LPPGFRFHPTDEELVVHYLKKKA+S PLPV+I
Sbjct: 1   MESPDSSSGSAPPRVLRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTI 60

Query: 48  IAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM 107
           IAEVDLYKFDPWELP KA FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP+M
Sbjct: 61  IAEVDLYKFDPWELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIM 120

Query: 108 SSGSN-QKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVS-------NKPPGCDLGN 159
           +SGS  +KVGVKKALVFY GKPPKG+KTNWIMHEYRLTD   S        +PP    G 
Sbjct: 121 ASGSTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGG 180

Query: 160 KKN--SLRLDDWVLCRIYKKNN-LHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNT 214
            +   SLRLDDWVLCRIYKK N         + +DS++D +  + P     SSQQ  T
Sbjct: 181 SRGAVSLRLDDWVLCRIYKKTNKAGAGQRSMECEDSVEDAVAAYAP-----SSQQHAT 233

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  304 bits (778), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 149/201 (74%), Positives = 166/201 (82%), Gaps = 6/201 (2%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           ME+   S+ G   P+LPPGFRFHPTDEELVVHYLKKKA S PLPVSIIAE+DLYKFDPWE
Sbjct: 1   MENMGDSSIGPGHPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWE 60

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LP+KA+FGE EWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKP+ +  S+ KVGVKKA
Sbjct: 61  LPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSH-KVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSN--KPPGCDLGNKKNSLRLDDWVLCRIYKKN 178
           LVFYGGKPPKGIKT+WIMHEYRLTD  +S   KPP      +KNSLRLDDWVLCRIYKKN
Sbjct: 120 LVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTT-TRKNSLRLDDWVLCRIYKKN 178

Query: 179 NLHRPLMDHD--KDDSMDDML 197
           +  RP M+    ++D M+ ML
Sbjct: 179 SSQRPTMERVLLREDLMEGML 199

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  298 bits (764), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 187/405 (46%), Positives = 233/405 (57%), Gaps = 68/405 (16%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA+  PLPV+IIAEVDLYKFDPWELP KATFGEQEWY
Sbjct: 26  PELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWY 85

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS-NQKVGVKKALVFYGGKPPKGI 132
           FFSPRDRKYPNGARPNRAATSGYWKATGTDKP+++SG   +KVGVK ALVFY GKPPKG+
Sbjct: 86  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGL 145

Query: 133 KTNWIMHEYRLTD---NKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDK 189
           KTNWIMHEYRLTD   +  +++PP    G++  SLRLDDWVLCRIYKK N      D  +
Sbjct: 146 KTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKIN-KAAAADQQR 204

Query: 190 ----DDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALL----VNEPNFF 241
               +DS++D +  + P +               M   GA+ +++ +LL     +E NF 
Sbjct: 205 SMECEDSVEDAVTAYPPYATAC------------MTGEGAHGSNYASLLHHQDSHEDNFL 252

Query: 242 EGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSS----WTD 297
           +GL     +    +  + G+ S  H    A  S +  +       +   PSSS    W D
Sbjct: 253 DGL-----LTAEDAGLSAGATSLSHLAAAARGSPAPTK-------QFLAPSSSTQFNWLD 300

Query: 298 HEDVPSGGALVNKR----FHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPP-- 351
              V   G L + R    F+   NV  + S+    D  G G+ ++           PP  
Sbjct: 301 ASTV---GILPHARNFPGFNRSRNVG-NMSLSSTADMAGAGTCAVDNGGGNAMNVMPPFM 356

Query: 352 -------PSIHQQ-AILGS--------LGDGIFRQPYHQLPGMNW 380
                   + HQQ  ILG+             F+ P  Q+ G+NW
Sbjct: 357 NHLPVQDGTYHQQHVILGAPLAPEATGAAASAFQHPV-QISGVNW 400

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  294 bits (752), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 136/170 (80%), Positives = 149/170 (87%), Gaps = 4/170 (2%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA+  PLPV+II EVDLYKFDPWELP KATFGEQEWY
Sbjct: 26  PELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWY 85

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS-NQKVGVKKALVFYGGKPPKGI 132
           FFSPRDRKYPNGARPNRAATSGYWKATGTDKP+++SG   +KVGVKKALVFY GKPPKG+
Sbjct: 86  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGL 145

Query: 133 KTNWIMHEYRLTD---NKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           KTNWIMHEYRLTD   +  +++PP    G++  SLRLDDWVLCRIYKK N
Sbjct: 146 KTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKIN 195

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  288 bits (737), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 137/176 (77%), Positives = 149/176 (84%), Gaps = 10/176 (5%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA  APLPV+IIAEVDLYKFDPWELP KAT GEQEWY
Sbjct: 32  PELPPGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQEWY 91

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS-----NQKVGVKKALVFYGGKP 128
           FFSPRDRKYPNGARPNRAATSGYWKATGTDKP+++SG+      +K+GVKKALVFY GKP
Sbjct: 92  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKP 151

Query: 129 PKGIKTNWIMHEYRLTD----NKVSNKPPGCDLGNK-KNSLRLDDWVLCRIYKKNN 179
           PKG+KTNWIMHEYRLTD       +N+PP    G++   SLRLDDWVLCRIYKK N
Sbjct: 152 PKGLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKKIN 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  286 bits (733), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/176 (77%), Positives = 148/176 (84%), Gaps = 10/176 (5%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA+  PLPV+IIAEVDLYKFDPWELP KATFGEQEWY
Sbjct: 31  PELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWY 90

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS-----NQKVGVKKALVFYGGKP 128
           FFSPRDRKYPNGARPNRAATSGYWKATGTDKP+++SG+      +K+GVKKALVFY GKP
Sbjct: 91  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKP 150

Query: 129 PKGIKTNWIMHEYRLTD----NKVSNKPPGCDLGNK-KNSLRLDDWVLCRIYKKNN 179
           PKG+KTNWIMHEYRLTD       S  PP    G++   SLRLDDWVLCRIYKK N
Sbjct: 151 PKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKKIN 206

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  286 bits (732), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 161/202 (79%), Gaps = 13/202 (6%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA+ APLPV+IIAEVDLYKFDPWELP KATFGE EWY
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWY 92

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS---NQKVGVKKALVFYGGKPPK 130
           FFSPRDRKYPNGARPNRAATSGYWKATGTDKP+++S +    +KVGVKKALVFY GKPP+
Sbjct: 93  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPR 152

Query: 131 GIKTNWIMHEYRLT----DNKVSNKPPGCDLGNKK-NSLRLDDWVLCRIYKKNNLHRPLM 185
           G+KTNWIMHEYRLT     +  +++PP    G++   SLRLDDWVLCRIYKK +     +
Sbjct: 153 GLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAV 212

Query: 186 DHDK-----DDSMDDMLGVHIP 202
             ++     +DS++D +  + P
Sbjct: 213 GDEQRSMECEDSVEDAVTAYPP 234

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  284 bits (726), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 136/202 (67%), Positives = 160/202 (79%), Gaps = 13/202 (6%)

Query: 14  PNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWY 73
           P LPPGFRFHPTDEELVVHYLKKKA+ APLPV+IIAEVDLYKFDPWELP KATFGE EWY
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWY 92

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS---NQKVGVKKALVFYGGKPPK 130
           FFSPRDRKY NGARPNRAATSGYWKATGTDKP+++S +    +KVGVKKALVFY GKPP+
Sbjct: 93  FFSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPR 152

Query: 131 GIKTNWIMHEYRLT----DNKVSNKPPGCDLGNKK-NSLRLDDWVLCRIYKKNNLHRPLM 185
           G+KTNWIMHEYRLT     +  +++PP    G++   SLRLDDWVLCRIYKK +     +
Sbjct: 153 GLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAV 212

Query: 186 DHDK-----DDSMDDMLGVHIP 202
             ++     +DS++D +  + P
Sbjct: 213 GDEQRSMECEDSVEDAVTAYPP 234

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|Q9ZNU2|NAC18_ARATH NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1

 Score =  278 bits (712), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/220 (70%), Positives = 171/220 (77%), Gaps = 18/220 (8%)

Query: 1   MESADSSTGGSPQPNLPPG-FRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPW 59
           MES DSS G  P     P  FRFHPTDEELV+HYLK+KA S PLPV+IIA+VDLYKFDPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query: 60  ELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSS--GSNQKVGV 117
           ELPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV+S+  G ++KVGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 118 KKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 177
           KKALVFY GKPPKG+K++WIMHEYRLTDNK ++    CD GNKKNSLRLDDWVLCRIYKK
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHI---CDFGNKKNSLRLDDWVLCRIYKK 177

Query: 178 NNLHRPLM-----------DHDKDDSM-DDMLGVHIPPSL 205
           NN                 DH + D M DD    H+PP L
Sbjct: 178 NNSTASRHHHHLHHIHLDNDHHRHDMMIDDDRFRHVPPGL 217

May encode a transcription factor involved in the elaboration of shoot apical meristems (SAM).

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
255583865	346	NAC domain-containing protein, putative	0.903	0.997	0.686	1e-131
359493876	353	PREDICTED: NAC domain-containing protein	0.918	0.994	0.671	1e-130
356544012	375	PREDICTED: NAC domain-containing protein	0.958	0.976	0.618	1e-126
302143056	331	unnamed protein product [Vitis vinifera]	0.866	1.0	0.641	1e-126
356549757	375	PREDICTED: NAC domain-containing protein	0.968	0.986	0.633	1e-125
224115022	355	NAC domain protein, IPR003441 [Populus t	0.905	0.974	0.662	1e-122
224128217	360	NAC domain protein, IPR003441 [Populus t	0.900	0.955	0.658	1e-119
302399025	364	NAC domain class transcription factor [M	0.850	0.892	0.638	1e-119
63252923	363	NAM-like protein [Prunus persica]	0.908	0.955	0.615	1e-119
350528641	358	NAC domain class transcription factor [P	0.853	0.910	0.626	1e-115

>gi|255583865|ref|XP_002532683.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527580|gb|EEF29696.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/383 (68%), Positives = 297/383 (77%), Gaps = 38/383 (9%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           MES DSS+G S QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPV+IIAEVDLYKFDPWE
Sbjct: 1   MESTDSSSG-SQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWE 59

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LPAKATFGEQEWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKPV++SG  QKVGVKKA
Sbjct: 60  LPAKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 180
           LVFYGGKPPKGIKTNWIMHEYRL DNKVSNKPPGCDL NKKNSLRLDDWVLCRIYKKNN 
Sbjct: 120 LVFYGGKPPKGIKTNWIMHEYRLADNKVSNKPPGCDLANKKNSLRLDDWVLCRIYKKNNT 179

Query: 181 HRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNF 240
           +RP MD +KDDSM+DMLG  IPPSL I S QQN  L+L    +G N   +G L+ N+ +F
Sbjct: 180 NRP-MDQEKDDSMEDMLG-SIPPSLTIGS-QQNARLQL---LKGTN---YGTLVENDTSF 230

Query: 241 FEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDHED 300
           F          N+ S +N  SIS     Q A+S+ S+    +M  LKRTLPS  W+D  D
Sbjct: 231 F----------NDHSISNTNSIS-----QLASSTCSRPGDLSMLPLKRTLPSLYWSDDVD 275

Query: 301 VPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIH-QQAI 359
           + +  +  +KR+ G++    D+S+  R+D  GNG  S  +LLSQLPQTPP   +H QQA 
Sbjct: 276 MAASPS-SSKRYQGDH--TGDESVV-RSD--GNG--SFVSLLSQLPQTPP---LHQQQAT 324

Query: 360 LGSLGDGIFRQPYHQLPGMNWYS 382
           LGS+GDGIFR PY QL G+NWYS
Sbjct: 325 LGSIGDGIFRPPY-QLSGLNWYS 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493876|ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/384 (67%), Positives = 294/384 (76%), Gaps = 33/384 (8%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           MES DSS+G SPQP LPPGFRFHPTDEELVVHYLKKKASSAPLPV+IIAEVDLYKFDPWE
Sbjct: 1   MESTDSSSG-SPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWE 59

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKA
Sbjct: 60  LPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 180
           LVFYGGKPPKGIKTNWIMHEYRL DNKV+ KPPGCD+GNKKNSLRLDDWVLCRIYKKNN 
Sbjct: 120 LVFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNT 179

Query: 181 HRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNF 240
           HR L   DKDDSMDDMLG  +P S+ +  Q    +LKL  P     + ++ ALL NE + 
Sbjct: 180 HRTLD-PDKDDSMDDMLG-PVPTSISMGQQ----SLKLQFP----KVPNYSALLENEQSL 229

Query: 241 FEGLTSHDGINNNSSNNNNGSISSH--HHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDH 298
           FEG+ + DGIN++ + +     SS   H    AA++SS L       LKRTLPS  W D 
Sbjct: 230 FEGMINSDGINSSGTISQLACSSSKPDHLSLVAATTSSIL------PLKRTLPSLYWNDD 283

Query: 299 EDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQA 358
           +   + G    KRF  EN        +G      +G++SIATLLSQLPQT   PS+HQQ+
Sbjct: 284 D---TAGPSTTKRFQAENT-------DGNIGRTTDGNNSIATLLSQLPQT---PSLHQQS 330

Query: 359 ILGSLGDGIFRQPYHQLPGMNWYS 382
           +LGSLG+G+FRQP+ QLPGMNWY+
Sbjct: 331 MLGSLGEGVFRQPF-QLPGMNWYA 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544012|ref|XP_003540450.1| PREDICTED: NAC domain-containing protein 18-like [Glycine max]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/391 (61%), Positives = 290/391 (74%), Gaps = 25/391 (6%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           M S DSS+G S QPNLPPGFRFHPTDEELVVHYLKKK +SAPLPV+IIAEVDLYKFDPWE
Sbjct: 1   MGSTDSSSG-SQQPNLPPGFRFHPTDEELVVHYLKKKTASAPLPVAIIAEVDLYKFDPWE 59

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LPAKA FGEQEWYFF+PRDRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKA
Sbjct: 60  LPAKAAFGEQEWYFFTPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSNK-PPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           LVFYGGKPP+GIKTNWIMHEYRL DNK +N+ PPGCDLGNKKN+LRLDDWVLCRIYKK+N
Sbjct: 120 LVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPPGCDLGNKKNTLRLDDWVLCRIYKKSN 179

Query: 180 LHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPN 239
            HR  M+H+++DSMDDM+G  IPPS+ +     + + + H  ++     + GA+L NE N
Sbjct: 180 THRSPMEHEREDSMDDMIG-GIPPSINVG----HMSARFHHLSKMTTAYNSGAMLENEHN 234

Query: 240 FFEGLTSHDGINNNSSNNNN--------GSISSHHHHQFAASSSSKLQVQAMDSLKRTLP 291
             EG+     I NN+   N         G++SSH     A  S       + ++ KRTL 
Sbjct: 235 LLEGMM----IGNNNGGMNTTTTATTTPGAMSSHLGGSKAELSFVPTMTHSSNTSKRTLS 290

Query: 292 SSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPP 351
           S  W D EDV +G +  N+RF+ E+  N++     R D     +SSIATLL+QLPQT   
Sbjct: 291 SLYWND-EDV-TGTSSSNRRFNLESGDNNNHGSVVRADQENGTASSIATLLNQLPQT--- 345

Query: 352 PSIHQQAILGSLGDGIFRQPYHQLPGMNWYS 382
           PS+HQQ++LGS+GDG+ R  Y Q+PGMNWY+
Sbjct: 346 PSLHQQSMLGSIGDGLLRTTY-QIPGMNWYA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143056|emb|CBI20351.3| unnamed protein product [Vitis vinifera]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/382 (64%), Positives = 278/382 (72%), Gaps = 51/382 (13%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           MES DSS+G SPQP LPPGFRFHPTDEELVVHYLKKKASSAPLPV+IIAEVDLYKFDPWE
Sbjct: 1   MESTDSSSG-SPQPQLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWE 59

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKA
Sbjct: 60  LPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 180
           LVFYGGKPPKGIKTNWIMHEYRL DNKV+ KPPGCD+GNKKNSLRLDDWVLCRIYKKNN 
Sbjct: 120 LVFYGGKPPKGIKTNWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNT 179

Query: 181 HRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNF 240
           HR L     D   D MLG  +P S+ +  Q    +LKL  P     + ++ ALL NE + 
Sbjct: 180 HRTLDPDKDDSMDD-MLG-PVPTSISMGQQ----SLKLQFP----KVPNYSALLENEQSL 229

Query: 241 FEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDHED 300
           FEG+ + DGIN  +S                          ++  LKRTLPS  W D + 
Sbjct: 230 FEGMINSDGINTTTS--------------------------SILPLKRTLPSLYWNDDD- 262

Query: 301 VPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAIL 360
             + G    KRF  EN        +G      +G++SIATLLSQLPQTP   S+HQQ++L
Sbjct: 263 --TAGPSTTKRFQAENT-------DGNIGRTTDGNNSIATLLSQLPQTP---SLHQQSML 310

Query: 361 GSLGDGIFRQPYHQLPGMNWYS 382
           GSLG+G+FRQP+ QLPGMNWY+
Sbjct: 311 GSLGEGVFRQPF-QLPGMNWYA 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549757|ref|XP_003543257.1| PREDICTED: NAC domain-containing protein 18 [Glycine max]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/387 (63%), Positives = 292/387 (75%), Gaps = 17/387 (4%)

Query: 1   MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
           MES DSS+G S QPNLPPGFRFHPTDEELVVHYLKKKA+SAPLPV+IIAEVDLYKFDPWE
Sbjct: 1   MESTDSSSG-SQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWE 59

Query: 61  LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
           LPAKA FGEQEWYFF+PRDRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKA
Sbjct: 60  LPAKAAFGEQEWYFFTPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKA 119

Query: 121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSNK-PPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           LVFYGGKPP+GIKTNWIMHEYRLTDNK +N+ PPGCDLGNKKN+LRLDDWVLCRIYKK+N
Sbjct: 120 LVFYGGKPPRGIKTNWIMHEYRLTDNKPNNRPPPGCDLGNKKNTLRLDDWVLCRIYKKSN 179

Query: 180 LHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNE-P 238
            HR  M+HD++DSMDDM+G  IPPS+ +     + + + H  ++     + GALL N+  
Sbjct: 180 THRSPMEHDREDSMDDMIG-GIPPSINVG----HMSARFHHLSKMTTAYNNGALLENDHH 234

Query: 239 NFFEGLT--SHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWT 296
           N  EG+   + +G  N ++    G +SSH        S       + ++ KRTL S  W 
Sbjct: 235 NLLEGMMIGNSNGGMNTTTTTTPGPMSSHLGGSKEELSFVPTMTHSSNTSKRTLSSLYWN 294

Query: 297 DHEDVPSGGALVNKRFHGE-NNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIH 355
           D EDV +G +  NKRF+ E +  N++     R D     +SSIATLL+QLPQT   PS+H
Sbjct: 295 D-EDV-AGTSSSNKRFNLELSGDNNNHGSVVRDDQENGTASSIATLLNQLPQT---PSLH 349

Query: 356 QQAILGSLGDGIFRQPYHQLPGMNWYS 382
           QQ+ILGS+GDG+ R  Y Q+PGMNWY+
Sbjct: 350 QQSILGSIGDGLLRTTY-QIPGMNWYA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115022|ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222859984|gb|EEE97531.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/391 (66%), Positives = 295/391 (75%), Gaps = 45/391 (11%)

Query: 1   MESADSSTGG-------SPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDL 53
           MES DSSTGG       S QPNLPPGFRFHPTDEELVVHYLKKK +SAPLP++IIAEVDL
Sbjct: 1   MESTDSSTGGAGGGGGGSQQPNLPPGFRFHPTDEELVVHYLKKKTTSAPLPMAIIAEVDL 60

Query: 54  YKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQ 113
           YKFDPWELPAKATFGEQEWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKP+++ G  Q
Sbjct: 61  YKFDPWELPAKATFGEQEWYFFSPRDRKYPNGTRPNRAATSGYWKATGTDKPILTLGGTQ 120

Query: 114 KVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCR 173
           KVGVKKALVFYGGKPPKGIKTNWIMHEYRL DNKV NKPPGCDLGNKKNSLRLDDWVLCR
Sbjct: 121 KVGVKKALVFYGGKPPKGIKTNWIMHEYRLADNKVKNKPPGCDLGNKKNSLRLDDWVLCR 180

Query: 174 IYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGAL 233
           IYKKNN HRP+  HDKDD MDD+LG  IPPS+++ + Q  T   LH+  +G N   +  L
Sbjct: 181 IYKKNNTHRPID-HDKDDYMDDILG-SIPPSILVGNHQNGT---LHL-AKGTN---YETL 231

Query: 234 LVNEPNFFEG-LTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPS 292
           L N+ N FEG ++S+DGI ++SS ++  S  S   H              M  LKRTLPS
Sbjct: 232 LDNDHNLFEGIISSNDGIRSSSSMSHVASSVSKPDH------------LPMLPLKRTLPS 279

Query: 293 SSWTDHE-DVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPP 351
             WTD +  VPS     +KRF G+  +N D+S+ G      +G+SSI TLLSQLPQT   
Sbjct: 280 LYWTDEDMAVPSS----SKRFQGD--INGDESVVGN-----DGNSSIVTLLSQLPQT--- 325

Query: 352 PSIHQQAILGSLGDGIFRQPYHQLPGMNWYS 382
             +HQQ +LGS+G+GIFR PY Q+PGMNWYS
Sbjct: 326 SQLHQQTMLGSMGNGIFRPPY-QIPGMNWYS 355

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128217|ref|XP_002329110.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222869779|gb|EEF06910.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 262/398 (65%), Positives = 286/398 (71%), Gaps = 54/398 (13%)

Query: 1   MESADSSTGG------------SPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSII 48
           ME  DSSTGG            S QPNLPPGFRFHPTDEELVVHYLKKK +SAPLPV+II
Sbjct: 1   MERTDSSTGGAGGGGGGGGGRGSQQPNLPPGFRFHPTDEELVVHYLKKKTTSAPLPVAII 60

Query: 49  AEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMS 108
           AEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV+S
Sbjct: 61  AEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLS 120

Query: 109 SGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDD 168
           SG  QKVGVKKALVFYGGKPPKGIKTNWIMHEYRL DNKV+NKPPGCDLGNKKNSLRLDD
Sbjct: 121 SGGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLADNKVNNKPPGCDLGNKKNSLRLDD 180

Query: 169 WVLCRIYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLN 228
           WVLCRIYKKNN  RP MDHDKDDSMDD+LG  IPPS+ + S Q  T   LH+  +G N  
Sbjct: 181 WVLCRIYKKNNTQRP-MDHDKDDSMDDVLG-SIPPSISVGSHQNGT---LHL-AKGTN-- 232

Query: 229 SFGALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSL-- 286
            FGALL N+ N FEG+ S                S       ++ S     V   D L  
Sbjct: 233 -FGALLDNDHNLFEGIISS---------------SDGIRSSSSSLSHMASSVTKRDLLML 276

Query: 287 --KRTLPSSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQ 344
             KRTLPS  WT  + V   G   +KRF G   +N D+ I  RTD    G+SS+ATLL +
Sbjct: 277 PPKRTLPSLYWTGEDMV---GPSSSKRFQG--GINGDE-IVVRTD----GNSSVATLLGE 326

Query: 345 LPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS 382
           LPQT   P +HQQ +LGS+ DGIFR PY Q+P MNWYS
Sbjct: 327 LPQT---PQLHQQTMLGSMADGIFRSPY-QIPSMNWYS 360

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399025|gb|ADL36807.1| NAC domain class transcription factor [Malus x domestica]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/371 (63%), Positives = 270/371 (72%), Gaps = 46/371 (12%)

Query: 19  GFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPR 78
           GFRFHPTDEELVVHYLKKKA+SAPLPV+IIAEVDLYKFDPWELPAKATFGEQEWYFFSPR
Sbjct: 28  GFRFHPTDEELVVHYLKKKATSAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPR 87

Query: 79  DRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIM 138
           DRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKALVFYGGKPPKGIKTNWIM
Sbjct: 88  DRKYPNGARPNRAATSGYWKATGTDKPVLTSGDTQKVGVKKALVFYGGKPPKGIKTNWIM 147

Query: 139 HEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDKDDSMDDMLG 198
           HEYRL DNK +NKPPGCDLGNKKNS+RLDDWVLCRIYKKNN HRP MDH+++DSM+D++G
Sbjct: 148 HEYRLADNKPNNKPPGCDLGNKKNSMRLDDWVLCRIYKKNNTHRP-MDHEREDSMEDIMG 206

Query: 199 VHIPPSLMISSQQQNTNLKLHMPTRGANLNSFG-ALLVNEPNFFEGLTSHDGINNNSSNN 257
             +PPS  IS    + N+KLH P   +   S+G   + N+  FF+G+ S          +
Sbjct: 207 PLMPPS--ISHVGHHQNMKLHFPKSNS---SYGPPFMENDQIFFDGIMS----------S 251

Query: 258 NNGSISSHHHHQFAASSSSKLQVQAMDSLKR-TLPSSSWTDHED-----VPSGGALVNKR 311
            +GS S+H             Q+Q    LKR  +PS  W + ED      PS    +  +
Sbjct: 252 TDGSASTH-------------QLQ----LKRPIVPSWYWNNQEDDQTAADPSSSKRI--Q 292

Query: 312 FHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQP 371
            H  +N  +            N SSSIA LLSQLPQTPP   +HQ A+LGSLGDGIFR P
Sbjct: 293 LHQLDNGTNSNGAGINGGSTNNNSSSIANLLSQLPQTPP---LHQHAVLGSLGDGIFRTP 349

Query: 372 YHQLPGMNWYS 382
           Y QLPGMNWYS
Sbjct: 350 Y-QLPGMNWYS 359

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|63252923|emb|CAG28971.1| NAM-like protein [Prunus persica]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/393 (61%), Positives = 281/393 (71%), Gaps = 46/393 (11%)

Query: 1   MESADSSTGGSPQP----------NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAE 50
           MES DSST    Q           NLPPGFRFHPTDEELVVHYLKKK +SAPLPV+IIAE
Sbjct: 1   MESTDSSTASQQQQQQQPQPPPQPNLPPGFRFHPTDEELVVHYLKKKVTSAPLPVAIIAE 60

Query: 51  VDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSG 110
           ++LYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV++SG
Sbjct: 61  IELYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSG 120

Query: 111 SNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWV 170
             QKVGVKKALVFYGGKPPKGIKTNWIMHEYRL D+K SNKPPGCDLGNKKNSLRLDDWV
Sbjct: 121 GTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLADSKTSNKPPGCDLGNKKNSLRLDDWV 180

Query: 171 LCRIYKKNNLHRPLMDHDKDDSMDDMLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSF 230
           LCRIYKKNN HRP MD +++DSM+DM+G  +PPS+      QN N  LH+P   +N N  
Sbjct: 181 LCRIYKKNNSHRP-MDLEREDSMEDMMGPLMPPSISHVGHHQNMN--LHLPK--SNTNYG 235

Query: 231 GALLVNEPNFFEGLTSHDGINNNSSNNNNGSISSHHHHQFAASSSSKLQVQAMDSLKRTL 290
              + N+   F+G+         SS + + S+S         + +S+L       LKR++
Sbjct: 236 PPFIENDQIIFDGIM--------SSTDGSASLS---------NGTSQL------PLKRSI 272

Query: 291 -PSSSWTDHEDVPSGGALVNKRFHGENNVNDDQSIEGRTDHHGNGSSSIATLLSQLPQTP 349
            PS    D ED  + GA  +KR    + ++   S    +    N S+SIA LLSQLPQTP
Sbjct: 273 VPSLYRNDQEDDQTAGASSSKRVVQLHQLD---SGTNNSVAANNNSTSIANLLSQLPQTP 329

Query: 350 PPPSIHQQAILGSLGDGIFRQPYHQLPGMNWYS 382
           P   +HQ A+LGSLGDG+FR PY QLPGMNW+S
Sbjct: 330 P---LHQHAMLGSLGDGLFRTPY-QLPGMNWFS 358

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350528641|gb|AEQ28762.1| NAC domain class transcription factor [Prunus salicina]

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/364 (62%), Positives = 267/364 (73%), Gaps = 38/364 (10%)

Query: 19  GFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPR 78
           GFRFHPTDEELVVHYLKKK +SAPLPV+IIAEV+LYKFDPWELPAKATFGEQEWYFFSPR
Sbjct: 28  GFRFHPTDEELVVHYLKKKVTSAPLPVAIIAEVELYKFDPWELPAKATFGEQEWYFFSPR 87

Query: 79  DRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIM 138
           DRKYPNGARPNRAATSGYWKATGTDKPV++SG  QKVGVKKALVFYGGKPPKGIKTNWIM
Sbjct: 88  DRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIM 147

Query: 139 HEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPLMDHDKDDSMDDMLG 198
           HEYRL DNK SNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN HRP MD +++DSM+DM+G
Sbjct: 148 HEYRLADNKTSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNSHRP-MDLEREDSMEDMMG 206

Query: 199 VHIPPSLMISSQQQNTNLKLHMPTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSSNNN 258
             +PPS+      QN N  LH+P   +N N     + N+   F+G+         SS + 
Sbjct: 207 PLMPPSISHVGHHQNMN--LHLPN--SNTNYGPPFIENDQIIFDGIM--------SSTDG 254

Query: 259 NGSISSHHHHQFAASSSSKLQVQAMDSLKRTLPSSSWTDHEDVPSGGALVNKRFHGENNV 318
           + S+S         + +S+L ++     +  +PS  W D     + GA  +KR    + +
Sbjct: 255 SASLS---------NGTSQLPLK-----RSIVPSLYWNDR----TAGASSSKRVVQLHQL 296

Query: 319 NDDQSIEGRTDHHGNGSSSIATLLSQLPQTPPPPSIHQQAILGSLGDGIFRQPYHQLPGM 378
           +   S    +    N S+SIA LLSQLPQTPP   +HQ A+LGSLGDG+FR PY QLPGM
Sbjct: 297 D---SGTNNSVAANNNSTSIANLLSQLPQTPP---LHQHAMLGSLGDGLFRTPY-QLPGM 349

Query: 379 NWYS 382
           NW+S
Sbjct: 350 NWFS 353

Source: Prunus salicina

Species: Prunus salicina

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.594	0.623	0.727	4.4e-101
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.460	0.55	0.829	1.5e-85
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.471	0.557	0.784	4.5e-82
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.439	0.467	0.661	5.2e-65
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.424	0.604	0.687	2.1e-61
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.421	0.516	0.654	3.8e-60
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.403	0.544	0.668	2.6e-59
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.397	0.525	0.703	2.7e-59
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.400	0.604	0.670	5.1e-58
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.403	0.485	0.652	1.1e-55

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 4.4e-101, Sum P(3) = 4.4e-101
 Identities = 168/231 (72%), Positives = 187/231 (80%)

Query:     1 MESADSSTGGSP-QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPW 59
             MES DSS G  P QPNLPPGFRFHPTDEELVVHYLK+KA+SAPLPV+IIAEVDLYKFDPW
Sbjct:     1 MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPW 60

Query:    60 ELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKK 119
             ELPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV++S  NQKVGVKK
Sbjct:    61 ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKK 120

Query:   120 ALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
             ALVFY GKPPKG+K++WIMHEYRL +NK +N+PPGCD GNKKNSLRLDDWVLCRIYKKNN
Sbjct:   121 ALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNN 180

Query:   180 LHRPLXXXXXXXXXXXXLGVHIPPSLMISSQQQNTNLKLHMPTRGANLNSF 230
               R +                IPPSL +++   +T L  H      ++N F
Sbjct:   181 ASRHVDNDKDHDMIDYIFR-KIPPSLSMAAA--STGLHQHHHNVSRSMNFF 228

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
 Identities = 151/182 (82%), Positives = 165/182 (90%)

Query:     1 MESADSSTGGSP-QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPW 59
             MES DSS G  P QPNLPPGFRFHPTDEELV+HYLK+KA S PLPV+IIA+VDLYKFDPW
Sbjct:     1 MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query:    60 ELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGS--NQKVGV 117
             ELPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV+S+G   ++KVGV
Sbjct:    61 ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query:   118 KKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 177
             KKALVFY GKPPKG+K++WIMHEYRLTDNK ++    CD GNKKNSLRLDDWVLCRIYKK
Sbjct:   121 KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHI---CDFGNKKNSLRLDDWVLCRIYKK 177

Query:   178 NN 179
             NN
Sbjct:   178 NN 179

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 778 (278.9 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
 Identities = 146/186 (78%), Positives = 159/186 (85%)

Query:     1 MESADSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWE 60
             ME+   S+ G   P+LPPGFRFHPTDEELVVHYLKKKA S PLPVSIIAE+DLYKFDPWE
Sbjct:     1 MENMGDSSIGPGHPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWE 60

Query:    61 LPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKA 120
             LP+KA+FGE EWYFFSPRDRKYPNG RPNRAATSGYWKATGTDKP+ +  S+ KVGVKKA
Sbjct:    61 LPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSH-KVGVKKA 119

Query:   121 LVFYGGKPPKGIKTNWIMHEYRLTDNKVSN--KPPGCDLGN-KKNSLRLDDWVLCRIYKK 177
             LVFYGGKPPKGIKT+WIMHEYRLTD  +S   KPP  DL   +KNSLRLDDWVLCRIYKK
Sbjct:   120 LVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPP--DLTTTRKNSLRLDDWVLCRIYKK 177

Query:   178 NNLHRP 183
             N+  RP
Sbjct:   178 NSSQRP 183

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 121/183 (66%), Positives = 150/183 (81%)

Query:    12 PQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQE 71
             P+ +LPPGFRFHPTDEEL++HYL+KK SS+P+P+SIIA+VD+YK DPW+LPAKA FGE+E
Sbjct:     6 PRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKE 65

Query:    72 WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVM---SSGSNQKVGVKKALVFYGGKP 128
             WYFFSPRDRKYPNGARPNRAA SGYWKATGTDK +      G ++ +G+KKALVFY GKP
Sbjct:    66 WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKP 125

Query:   129 PKGIKTNWIMHEYRLTDN----KV-SNKPPGCDLGN-------KKNSLRLDDWVLCRIYK 176
             PKG+KTNWIMHEYRL D+    ++ S++  G ++ N       K+ S+RLDDWVLCRIYK
Sbjct:   126 PKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVLCRIYK 185

Query:   177 KNN 179
             K++
Sbjct:   186 KSH 188

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 119/173 (68%), Positives = 133/173 (76%)

Query:    13 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEW 72
             Q  LPPGFRFHPTDEEL+V+YL+ +  S P PVSII EVD+YKFDPW+LP K  FGE EW
Sbjct:     6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEW 65

Query:    73 YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGI 132
             YFFSPR+RKYPNG RPNRAA SGYWKATGTDK + S  SN  VGVKKALVFY G+PPKGI
Sbjct:    66 YFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGRPPKGI 123

Query:   133 KTNWIMHEYRLTDN-KVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPL 184
             KT+WIMHEYRL D+ K S K  G        S+RLD+WVLCRIYKK    + L
Sbjct:   124 KTDWIMHEYRLHDSRKASTKRNG--------SMRLDEWVLCRIYKKRGASKLL 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
 Identities = 112/171 (65%), Positives = 131/171 (76%)

Query:    15 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYF 74
             NLP GFRFHPTDEELV  YL ++ +S P+ V +IAE+DLYKF+PWELP  A +GE+EWYF
Sbjct:    49 NLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYF 108

Query:    75 FSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKT 134
             FS RDRKYPNG+RPNRAA +GYWKATG DKP+   G  + +G+KKALVFY GK PKGIKT
Sbjct:   109 FSHRDRKYPNGSRPNRAAGTGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKT 165

Query:   135 NWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIY-KKNNLHRPL 184
             NWIMHEYRL +   S         NKKN+LRLDDWVLCRIY KK  + + L
Sbjct:   166 NWIMHEYRLANVDRSAST------NKKNNLRLDDWVLCRIYNKKGTMEKYL 210

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
 Identities = 109/163 (66%), Positives = 127/163 (77%)

Query:    15 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYF 74
             NLP GFRFHPTDEELV  YL +K +S  +   +IAE+DLYKF+PWELP  + +GE+EWYF
Sbjct:     6 NLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSLYGEKEWYF 65

Query:    75 FSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKT 134
             FSPRDRKYPNG+RPNRAA +GYWKATG DKP+   G  + +G+KKALVFY GK PKGIKT
Sbjct:    66 FSPRDRKYPNGSRPNRAAGTGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKT 122

Query:   135 NWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 177
             NWIMHEYRL     +N      + NKKN+LRLDDWVLCRIY K
Sbjct:   123 NWIMHEYRL-----ANVDRSASV-NKKNNLRLDDWVLCRIYNK 159

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 114/162 (70%), Positives = 128/162 (79%)

Query:    16 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFF 75
             LPPGFRFHPTDEELV+HYL +K +S  + V IIAE+DLYK+DPWELP  A +GE+EWYFF
Sbjct:     7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFF 66

Query:    76 SPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTN 135
             SPRDRKYPNG+RPNR+A SGYWKATG DKP+   G  + VG+KKALVFY GK PKG KTN
Sbjct:    67 SPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKGEKTN 123

Query:   136 WIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 177
             WIMHEYRL D   S +        KKNSLRLDDWVLCRIY K
Sbjct:   124 WIMHEYRLADVDRSVR-------KKKNSLRLDDWVLCRIYNK 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 110/164 (67%), Positives = 127/164 (77%)

Query:    17 PPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFS 76
             PPGFRFHPTDEELV+ YL +K +S P+P  II E+DLY++DPW+LP  A +GE+EWYFFS
Sbjct:    11 PPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMALYGEKEWYFFS 70

Query:    77 PRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNW 136
             PRDRKYPNG+RPNRAA +GYWKATG DKP+   G  + VG+KKALVFY GKPP G KTNW
Sbjct:    71 PRDRKYPNGSRPNRAAGTGYWKATGADKPI---GRPKPVGIKKALVFYSGKPPNGEKTNW 127

Query:   137 IMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNL 180
             IMHEYRL D   S +        KKNSLRLDDWVLCRIY K  +
Sbjct:   128 IMHEYRLADVDRSVR--------KKNSLRLDDWVLCRIYNKKGV 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 109/167 (65%), Positives = 127/167 (76%)

Query:    13 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEW 72
             Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA FGE+EW
Sbjct:    11 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEW 70

Query:    73 YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGI 132
             YFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK PKG 
Sbjct:    71 YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKGT 128

Query:   133 KTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
             KTNWIMHEYRL +       P      +  S +LDDWVLCRIYKK +
Sbjct:   129 KTNWIMHEYRLIE-------PS----RRNGSTKLDDWVLCRIYKKQS 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027621001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (353 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-82

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  247 bits (632), Expect = 2e-82
 Identities = 91/131 (69%), Positives = 107/131 (81%), Gaps = 3/131 (2%)

Query: 16  LPPGFRFHPTDEELVVHYLKKKASSAPLPV-SIIAEVDLYKFDPWELP-AKATFGEQEWY 73
           LPPGFRFHPTDEELVV+YLK+K    PLP+  +I EVD+YKF+PW+LP  KA  G++EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 74  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIK 133
           FFSPRDRKYPNG+R NRA  SGYWKATG DKPV+S G  + VG+KK LVFY G+ PKG K
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGG-EVVGMKKTLVFYKGRAPKGEK 119

Query: 134 TNWIMHEYRLT 144
           T+W+MHEYRL 
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=4.2e-43  Score=301.97  Aligned_cols=128  Identities=59%  Similarity=1.202  Sum_probs=97.1

Q ss_pred             CCCCceeCCChHHHHHHHHHHhHcCCCCCc-cceeecCCCCCCCCCcCccccCCceeEEEeccCCCCCCCCCCCccccCC
Q 016791           16 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-SIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATS   94 (382)
Q Consensus        16 LPPGfRF~PTDEELI~~YLrpKi~G~plp~-~iI~evDVY~~ePweLP~~~~~Ge~eWYFFspr~rK~~nG~R~~Ratgg   94 (382)
                      |||||||+|||||||.+||++|+.|.+++. .+|+++|||++|||+|++....++++||||+++++++.+|.|++|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            899999999999999999999999999988 7999999999999999964444677999999999999999999999999


Q ss_pred             CeeeecCCCccEEcCCCCeEEEEEEEEEEecCCCCCCCCcCeEEEEEEeC
Q 016791           95 GYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLT  144 (382)
Q Consensus        95 GyWKatG~~K~I~~~~G~~vVG~KKtLvFY~gk~pkg~KT~WvMhEYrL~  144 (382)
                      |+||.+|++++|.+. ++++||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999876 5689999999999998888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	382
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-60
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-59
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-59

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 130/165 (78%), Gaps = 8/165 (4%)
Query: 15  NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYF 74
           NLPPGFRFHPTD+ELV HYL +KA+   LPV IIAEVDLYKFDPW+LP +A FG +EWYF
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYF 73
Query: 75  FSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKT 134
           F+PRDRKYPNG+RPNRAA +GYWKATG DKPV   G  + +G+KKALVFY GK P+G+KT
Sbjct: 74  FTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKKALVFYAGKAPRGVKT 131
Query: 135 NWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           +WIMHEYRL D   +        G KK SLRLDDWVLCR+Y K N
Sbjct: 132 DWIMHEYRLADAGRAAA------GAKKGSLRLDDWVLCRLYNKKN 170

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 109/167 (65%), Positives = 126/167 (75%), Gaps = 13/167 (7%)
Query: 13  QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEW 72
           Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA FGE+EW
Sbjct: 14  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEW 73
Query: 73  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGI 132
           YFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK PKG 
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKGT 131
Query: 133 KTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           KTNWIMHEYRL +    N            S +LDDWVLCRIYKK +
Sbjct: 132 KTNWIMHEYRLIEPSRRN-----------GSTKLDDWVLCRIYKKQS 167

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 109/167 (65%), Positives = 126/167 (75%), Gaps = 13/167 (7%)
Query: 13  QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEW 72
           Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA FGE+EW
Sbjct: 17  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEW 76
Query: 73  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGI 132
           YFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK PKG 
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKGT 134
Query: 133 KTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
           KTNWIMHEYRL +    N            S +LDDWVLCRIYKK +
Sbjct: 135 KTNWIMHEYRLIEPSRRN-----------GSTKLDDWVLCRIYKKQS 170

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	382
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-109
1ut7_A	171	No apical meristem protein; transcription regulati	1e-107
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  316 bits (812), Expect = e-109
 Identities = 112/175 (64%), Positives = 130/175 (74%), Gaps = 8/175 (4%)

Query: 5   DSSTGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAK 64
                   + NLPPGFRFHPTD+ELV HYL +KA+   LPV IIAEVDLYKFDPW+LP +
Sbjct: 4   RRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPER 63

Query: 65  ATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFY 124
           A FG +EWYFF+PRDRKYPNG+RPNRAA +GYWKATG DKPV   G  + +G+KKALVFY
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKKALVFY 121

Query: 125 GGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
            GK P+G+KT+WIMHEYRL D   +          KK SLRLDDWVLCR+Y K N
Sbjct: 122 AGKAPRGVKTDWIMHEYRLADAGRAAAGA------KKGSLRLDDWVLCRLYNKKN 170

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  311 bits (799), Expect = e-107
 Identities = 109/172 (63%), Positives = 126/172 (73%), Gaps = 13/172 (7%)

Query: 8   TGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATF 67
           T    Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA F
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 68  GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGK 127
           GE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGK 126

Query: 128 PPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
            PKG KTNWIMHEYRL +    N              +LDDWVLCRIYKK +
Sbjct: 127 APKGTKTNWIMHEYRLIEPSRRNGST-----------KLDDWVLCRIYKKQS 167

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 46/275 (16%), Positives = 75/275 (27%), Gaps = 96/275 (34%)

Query: 22  FHPTD-EELVVHYLKKKASS--------APLPVSIIAEVDLYKFDPWELPAKATFGEQEW 72
             P + + L++ YL  +            P  +SIIAE                      
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE---------------------- 335

Query: 73  YFFSPRDRKYPNGARPNRAATSGYWKATGTDK---PVMSSGSNQKVGVKKAL-----VF- 123
                  R            T   WK    DK    + SS +  +    + +     VF 
Sbjct: 336 -----SIRDGLA--------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 124 YGGK-PPKGIKTNWIMHEYRLTD---NKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 179
                P   +   W            NK+       +   K++++ +   +   +  K  
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL-VEKQPKESTISIPS-IYLELKVKLE 440

Query: 180 ----LHRPLMDH-------DKDD---SMDDM-----LGVHIPPSLMISSQQQNTNLKLHM 220
               LHR ++DH       D DD      D      +G H    L      +   L    
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH----LKNIEHPERMTL---- 492

Query: 221 PTRGANLNSFGALLVNEPNFFEGLTSHDGINNNSS 255
                    F  + ++   F E    HD    N+S
Sbjct: 493 ---------FRMVFLDF-RFLEQKIRHDSTAWNAS 517

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	382
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-55  Score=401.03  Aligned_cols=161  Identities=70%  Similarity=1.306  Sum_probs=136.7

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHhHcCCCCCccceeecCCCCCCCCCcCccccCCceeEEEeccCCCCCCCCCCCcc
Q 016791           11 SPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNR   90 (382)
Q Consensus        11 ~~~~~LPPGfRF~PTDEELI~~YLrpKi~G~plp~~iI~evDVY~~ePweLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R   90 (382)
                      ..++.|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..|+++||||+++++||++|.|++|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCE
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCcee
Confidence            45689999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ccCCCeeeecCCCccEEcCCCCeEEEEEEEEEEecCCCCCCCCcCeEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q 016791           91 AATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWV  170 (382)
Q Consensus        91 atggGyWKatG~~K~I~~~~G~~vVG~KKtLvFY~gk~pkg~KT~WvMhEYrL~~~~~~~~pp~~~~~~~~~~~~~dd~V  170 (382)
                      ++++||||++|++++|...  +.+||+||+|+||.+++|++.||+|+||||+|.......      ...+.+.++.++||
T Consensus        90 ~t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~------~~~~~~~~~~~~wV  161 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAA------AGAKKGSLRLDDWV  161 (174)
T ss_dssp             EETTEEEEECSCCEEECCS--SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------------CCSSEE
T ss_pred             ecCCceEccCCCCcEEeeC--CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcc------cccccCCCCCCCEE
Confidence            9999999999999999753  589999999999999999999999999999999864221      01122334578999


Q ss_pred             EEEEEEeCC
Q 016791          171 LCRIYKKNN  179 (382)
Q Consensus       171 LCRIykK~~  179 (382)
                      |||||+|++
T Consensus       162 lCrvf~K~~  170 (174)
T 3ulx_A          162 LCRLYNKKN  170 (174)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEEEcCC
Confidence            999999875

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.2e-55  Score=398.03  Aligned_cols=157  Identities=68%  Similarity=1.211  Sum_probs=133.2

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHhHcCCCCCccceeecCCCCCCCCCcCccccCCceeEEEeccCCCCCCCCCCCcc
Q 016791           11 SPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNR   90 (382)
Q Consensus        11 ~~~~~LPPGfRF~PTDEELI~~YLrpKi~G~plp~~iI~evDVY~~ePweLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R   90 (382)
                      ..+..|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++++||||+++++|+++|.|++|
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R   91 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNR   91 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCE
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccc
Confidence            56789999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             ccCCCeeeecCCCccEEcCCCCeEEEEEEEEEEecCCCCCCCCcCeEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q 016791           91 AATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWV  170 (382)
Q Consensus        91 atggGyWKatG~~K~I~~~~G~~vVG~KKtLvFY~gk~pkg~KT~WvMhEYrL~~~~~~~~pp~~~~~~~~~~~~~dd~V  170 (382)
                      ++++||||++|++++|...  +.+||+||+|+||.+++|++.||+|+||||+|......           .+....++||
T Consensus        92 ~t~~G~Wk~tG~~k~I~~~--~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~-----------~~~~~~~~~V  158 (171)
T 1ut7_A           92 VAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR-----------NGSTKLDDWV  158 (171)
T ss_dssp             EETTEEEEEEEEEEEEEET--TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-------------------CCEE
T ss_pred             cCCCCEEeccCCCceEEec--CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccc-----------cCcccCCCEE
Confidence            9999999999999999863  48999999999999999999999999999999986411           1122368999


Q ss_pred             EEEEEEeCCC
Q 016791          171 LCRIYKKNNL  180 (382)
Q Consensus       171 LCRIykK~~~  180 (382)
                      |||||+|...
T Consensus       159 lCrv~~k~~~  168 (171)
T 1ut7_A          159 LCRIYKKQSS  168 (171)
T ss_dssp             EEEEEECC--
T ss_pred             EEEEEEcCCC
Confidence            9999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	382
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-75

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  229 bits (584), Expect = 2e-75
 Identities = 109/170 (64%), Positives = 125/170 (73%), Gaps = 13/170 (7%)

Query: 8   TGGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATF 67
           T    Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA F
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 68  GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGK 127
           GE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGK 126

Query: 128 PPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 177
            PKG KTNWIMHEYRL +    N              +LDDWVLCRIYKK
Sbjct: 127 APKGTKTNWIMHEYRLIEPSRRNGST-----------KLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	382
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.8e-53  Score=377.15  Aligned_cols=155  Identities=70%  Similarity=1.236  Sum_probs=131.9

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHhHcCCCCCccceeecCCCCCCCCCcCccccCCceeEEEeccCCCCCCCCCCCcc
Q 016791           11 SPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNR   90 (382)
Q Consensus        11 ~~~~~LPPGfRF~PTDEELI~~YLrpKi~G~plp~~iI~evDVY~~ePweLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R   90 (382)
                      ..+++|||||||+|||||||.|||++|+.|.|++..+|+++|||++|||+||+....++++||||+++++++++|.|.+|
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R   91 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNR   91 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCE
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCcccc
Confidence            67889999999999999999999999999999999999999999999999999887888999999999999999999999


Q ss_pred             ccCCCeeeecCCCccEEcCCCCeEEEEEEEEEEecCCCCCCCCcCeEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q 016791           91 AATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWV  170 (382)
Q Consensus        91 atggGyWKatG~~K~I~~~~G~~vVG~KKtLvFY~gk~pkg~KT~WvMhEYrL~~~~~~~~pp~~~~~~~~~~~~~dd~V  170 (382)
                      ++++|+||++|++++|.+  ++.+||+||+|+||.++.+++.+|+|+||||+|.+.....           +..+.++||
T Consensus        92 ~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~-----------~~~~~~~~V  158 (166)
T d1ut7a_          92 VAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN-----------GSTKLDDWV  158 (166)
T ss_dssp             EETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-------------------CCEE
T ss_pred             ccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc-----------CccccCCEE
Confidence            999999999999998864  4589999999999999999999999999999998864321           122367999


Q ss_pred             EEEEEEeC
Q 016791          171 LCRIYKKN  178 (382)
Q Consensus       171 LCRIykK~  178 (382)
                      |||||+|+
T Consensus       159 LCrI~~Kk  166 (166)
T d1ut7a_         159 LCRIYKKQ  166 (166)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEecC
Confidence            99999984