Citrus Sinensis ID: 016821

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMTSSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYETQM
Secondary Structure (PSIPRED)
cEEEEEEcccccEEEEEEEcccEEEEEccccHHHcccccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEEEEEEcccccccccccEEEEEEEEccccccccEEEEccEEccccccccccEEEEEEEEcccccccccccccccEEEccccccccccccccccccccEEEEEEEEEEEEEEEcccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHccHHcccccccHHccccccccHHHHHHHHHHHHHHHcccccEEEEcccccEEEEEccccccccccccHccccccccccccccccccccccccEEEEEccccccccccEEEEEccHHHHHEHHHHHHccccccccccccccccccEEEEEEEcccEEEEEEEEEEEccccccccccccHEEEEEEcccccccccEEEEEEEEcHHHccccccEEEEEEEcccccccccEccccccEEEEcccEEEEEEEcccccccccEEEEEEEEEEccccccccccEEEEcccccHHHHHccc
Coil and Loop (DISEMBL)
MIISCWMDLVGVAFLCAKtrhkwyrfdhsrsrqqqqhkctetqtgfqkqtttqgsfsnmtssscckispiiPIFVSYLLVLSSSIclvhssdtgknlnatnqttlrpeeELHKLKFIRAHLNkinkpavktiqspdgdiiDCVEthlqpafdhpklkgqrpldpparpnghnpsgmitEEFQlwsfsgescpegtipirrttEQDVLRAtsvgkfgrkKIRRVRrdtnsnghehavgyvtgdqyygakasinvwaprvvnQYEFSLSQMWVIsgsfgddlntieagwqvspelygdnyprfftywttdayqatgCYNLLCSGFVQTNNRIAIgaaisptssynggqfdISLLIWKLMVLVTnrdkirlpdpefdlsRYETQM
Flexible Loop (DISEMBL)
MIISCWMDLVGVAFLCAKTRHKWYRFDHsrsrqqqqhkctetqtgfqkqtttqgsfsnMTSSSCCKISPIIPIFVSYLLVLSSSICLVHSsdtgknlnatnqttlrpeEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGtipirrtteqdvlratsvgkfgrkkirrvrrdtnsnghehavgyvtgDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAaisptssyngGQFDISLLIWKLMVLVTnrdkirlpdpefdlsryetqm
Low Complexity Region (SEG)
MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCtetqtgfqkqtttqGSFSNMTssscckispiipiFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYETQM
Disordered region (IsUnstruct)
*IISCWMDLVGVAFLCAKTRHKWYRFD***********************************SCCKISPIIPIFVSYLLVLSSSICLVHS********************LHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQ*******************************EFQLWSFSGESCPEGTIPIRR****DVLRATSVGKFG***************HEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIR***************
Disordered Region (DISOPRED)
MIISCW*DLVGVAFLCAKTRHKWYRFD*******************************MTSSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTG************************AHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQR*****************************SCPEGTIPIRR*************************DTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYE***
Disordered Region (DISEMBL)
MIISCWMDLVGVAFLCAKTRHKWYRF***********************************SSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYETQM
Disordered Region (DISPRO)
MIISCWMDLVGVAFLCAKTRHKWYRFDHS*********************************SCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPAR*********ITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYET**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMTSSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLMVLVTNRDKIRLPDPEFDLSRYETQM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
359473248	344	PREDICTED: uncharacterized protein LOC10	0.900	1.0	0.785	1e-161
297739098	329	unnamed protein product [Vitis vinifera]	0.764	0.887	0.835	1e-146
224110908	466	predicted protein [Populus trichocarpa]	0.890	0.729	0.727	1e-143
21389708	473	putative carboxyl-terminal proteinase [G	0.897	0.725	0.762	1e-141
224102449	416	predicted protein [Populus trichocarpa]	0.759	0.697	0.788	1e-133
147843236	443	hypothetical protein VITISV_016799 [Viti	0.795	0.686	0.658	1e-132
356524024	463	PREDICTED: uncharacterized protein LOC10	0.819	0.676	0.736	1e-132
449522859	419	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.767	0.699	0.748	1e-128
449450440	419	PREDICTED: uncharacterized protein LOC10	0.767	0.699	0.748	1e-128
356497508	471	PREDICTED: uncharacterized protein LOC10	0.892	0.723	0.695	1e-127

>gi|359473248|ref|XP_002266484.2| PREDICTED: uncharacterized protein LOC100246465, partial [Vitis vinifera]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/355 (78%), Positives = 308/355 (86%), Gaps = 11/355 (3%)

Query: 1   MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMT 60
           M++ CWMDLVG      KTR+KWY FDH R    +QH+CT+ QTG  ++TT Q   SNM 
Sbjct: 1   MVVLCWMDLVGDMAPWTKTRNKWYYFDHRR----RQHQCTQPQTGLAEETT-QTISSNM- 54

Query: 61  SSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAH 120
           +SS CKISPIIPIFVS+LLV +SS+C VHSS+T +  N T     RP EEL KLK IR H
Sbjct: 55  ASSYCKISPIIPIFVSFLLV-ASSVCSVHSSETDRPANQT----FRPGEELEKLKIIRDH 109

Query: 121 LNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEE 180
           L KINKPAVKTIQSPDGD+IDCV +HLQPAFDHP+LKGQ+PLDPP RP GHNP+G ++E+
Sbjct: 110 LLKINKPAVKTIQSPDGDLIDCVLSHLQPAFDHPQLKGQKPLDPPERPKGHNPTGAVSED 169

Query: 181 FQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVT 240
           FQLWSFSGESCPEGTIPIRRTTE+DVLRA+S+G+FGRK  R VRRD++SNGHEHAVGYVT
Sbjct: 170 FQLWSFSGESCPEGTIPIRRTTEEDVLRASSIGRFGRKVRRHVRRDSSSNGHEHAVGYVT 229

Query: 241 GDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR 300
           GDQYYGAKASINVWAPRV NQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR
Sbjct: 230 GDQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR 289

Query: 301 FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSY GGQFDISLL+WK
Sbjct: 290 FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYKGGQFDISLLVWK 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739098|emb|CBI28587.3| unnamed protein product [Vitis vinifera]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/297 (83%), Positives = 271/297 (91%), Gaps = 5/297 (1%)

Query: 61  SSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAH 120
           +SS CKISPIIPIFVS+LLV +SS+C VHSS+T +  N     T RP EEL KLK IR H
Sbjct: 2   ASSYCKISPIIPIFVSFLLV-ASSVCSVHSSETDRPAN----QTFRPGEELEKLKIIRDH 56

Query: 121 LNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEE 180
           L KINKPAVKTIQSPDGD+IDCV +HLQPAFDHP+LKGQ+PLDPP RP GHNP+G ++E+
Sbjct: 57  LLKINKPAVKTIQSPDGDLIDCVLSHLQPAFDHPQLKGQKPLDPPERPKGHNPTGAVSED 116

Query: 181 FQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVT 240
           FQLWSFSGESCPEGTIPIRRTTE+DVLRA+S+G+FGRK  R VRRD++SNGHEHAVGYVT
Sbjct: 117 FQLWSFSGESCPEGTIPIRRTTEEDVLRASSIGRFGRKVRRHVRRDSSSNGHEHAVGYVT 176

Query: 241 GDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR 300
           GDQYYGAKASINVWAPRV NQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR
Sbjct: 177 GDQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR 236

Query: 301 FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWKLM 357
           FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSY GGQFDISLL+WK++
Sbjct: 237 FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYKGGQFDISLLVWKVL 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110908|ref|XP_002315678.1| predicted protein [Populus trichocarpa] gi|222864718|gb|EEF01849.1| predicted protein [Populus trichocarpa]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/356 (72%), Positives = 292/356 (82%), Gaps = 16/356 (4%)

Query: 1   MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMT 60
           M+I CWMD         +TR++   FDH R + Q   +   T T    + T QG+FSNM 
Sbjct: 1   MVIMCWMD--------TRTRNRRGYFDHRRRQHQCTQQTNTTTTADLAKETRQGNFSNMA 52

Query: 61  SSSCCK-ISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRA 119
           SS C K +SPII +F+ +LLV SS+IC V SS+T ++ +ATNQT  RP+EEL KLK IR 
Sbjct: 53  SSWCYKKMSPIISVFLCFLLVASSNICPVFSSET-RSGHATNQT-FRPQEELQKLKIIRE 110

Query: 120 HLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITE 179
            L+KINKPA     SPDGD+IDCV +HLQPAFDHP+LKGQ+PL+PP RP GH+PS M+TE
Sbjct: 111 RLDKINKPA-----SPDGDLIDCVLSHLQPAFDHPQLKGQKPLEPPERPKGHDPSSMVTE 165

Query: 180 EFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYV 239
            FQ W  SGESCPEGT+PIRRTTEQD+LRA+SV +FGRK  R VRRDTNSNGHEHAVGYV
Sbjct: 166 NFQSWGLSGESCPEGTVPIRRTTEQDMLRASSVRRFGRKLRRHVRRDTNSNGHEHAVGYV 225

Query: 240 TGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYP 299
           TGDQYYGAKASINVWAPRV NQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYP
Sbjct: 226 TGDQYYGAKASINVWAPRVSNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYP 285

Query: 300 RFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           RFFTYWTTDAYQATGCYNLLCSGFVQTN+RIAIGAAISPTSSY+GGQFDISLL+WK
Sbjct: 286 RFFTYWTTDAYQATGCYNLLCSGFVQTNSRIAIGAAISPTSSYSGGQFDISLLVWK 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21389708|gb|AAK84952.2| putative carboxyl-terminal proteinase [Gossypium hirsutum]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/354 (76%), Positives = 296/354 (83%), Gaps = 11/354 (3%)

Query: 5   CWMD-LVGVAFLCAKT-RHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMTSS 62
           CWMD LVG +F   KT R +W  FDH R    +QH+CT+T+T  Q+Q T   S SNM SS
Sbjct: 3   CWMDYLVGASFPKGKTTRSQWCCFDHRR----RQHQCTKTETNIQQQPTPATS-SNMASS 57

Query: 63  SCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLN 122
           SC    PIIPIFV +LLV SSS C V SS+TG +L+A NQT  RPE EL KLK IR  LN
Sbjct: 58  SCNISPPIIPIFVFFLLV-SSSFCPVRSSETG-SLHAKNQT-FRPEVELQKLKAIRELLN 114

Query: 123 KINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQ 182
           KINKP +K IQSPDGDIIDCV  H QPAFDHP+LKGQ+PLDPP RP+G NP+GM  E+FQ
Sbjct: 115 KINKPPIKLIQSPDGDIIDCVLLHHQPAFDHPRLKGQKPLDPPERPSGVNPNGMGGEDFQ 174

Query: 183 LWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRR-DTNSNGHEHAVGYVTG 241
           LWS SGESCPEGTIPIRRT+E+D+LRA+SV +FGRK+ RR  R D+ +NGHEHAVGYV+G
Sbjct: 175 LWSMSGESCPEGTIPIRRTSEEDMLRASSVRRFGRKRPRRRVRRDSTNNGHEHAVGYVSG 234

Query: 242 DQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRF 301
           DQYYGAKASINVW PRV NQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRF
Sbjct: 235 DQYYGAKASINVWTPRVSNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRF 294

Query: 302 FTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           FTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK
Sbjct: 295 FTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 348

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102449|ref|XP_002312681.1| predicted protein [Populus trichocarpa] gi|222852501|gb|EEE90048.1| predicted protein [Populus trichocarpa]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/298 (78%), Positives = 260/298 (87%), Gaps = 8/298 (2%)

Query: 59  MTSSSCCK-ISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFI 117
           M SS C K IS +I +FV +LLV+SS IC V SS+TG   +ATNQT  RP+EEL KLK+I
Sbjct: 1   MASSWCNKKISSVISVFVCFLLVVSSKICPVSSSETGSR-HATNQT-FRPQEELQKLKYI 58

Query: 118 RAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMI 177
           R HL KINKPA     SP GD+IDCV +H QPAFDHP+LKGQ+PL+PP RP G  P+GM+
Sbjct: 59  RKHLEKINKPA-----SPVGDLIDCVLSHQQPAFDHPQLKGQKPLEPPERPKGLEPTGMV 113

Query: 178 TEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVG 237
           TE FQLW  SGE+CPEGTIPIRRTTEQD+LRA+S+ +FGRK  R VRRDTNSNGHEHAVG
Sbjct: 114 TENFQLWDLSGEACPEGTIPIRRTTEQDMLRASSIRRFGRKLRRHVRRDTNSNGHEHAVG 173

Query: 238 YVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 297
           YVTGDQYYGAKASINVWAPRV +QYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN
Sbjct: 174 YVTGDQYYGAKASINVWAPRVSSQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 233

Query: 298 YPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           YPRFFTYWT+DAYQATGCYNLLCSGFVQTNNR+AIGAAISPTSSY+GGQFDISLL+WK
Sbjct: 234 YPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRVAIGAAISPTSSYSGGQFDISLLVWK 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843236|emb|CAN78442.1| hypothetical protein VITISV_016799 [Vitis vinifera]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/369 (65%), Positives = 267/369 (72%), Gaps = 65/369 (17%)

Query: 1   MIISCWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQQHKCTETQTGFQKQTTTQGSFSNMT 60
           M++ CWMDLVG      KTR+KWY FDH R    +QH+CT+ QT                
Sbjct: 1   MVVLCWMDLVGDXAPWTKTRNKWYYFDHRR----RQHQCTQPQT---------------- 40

Query: 61  SSSCCKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAH 120
                                      VHSS+T +  N     T RP EEL KLK IR H
Sbjct: 41  ---------------------------VHSSETDRPAN----QTFRPGEELEKLKIIRDH 69

Query: 121 LNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEE 180
           L KINKPAVKTIQSPDGD+IDCV +HLQPAFDHP+LKGQ+PLDPP RP GHNP+G ++E+
Sbjct: 70  LLKINKPAVKTIQSPDGDLIDCVLSHLQPAFDHPQLKGQKPLDPPERPKGHNPTGAVSED 129

Query: 181 FQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVT 240
           FQLWSFSGESCPEGTIPIRRTTE+DVLRA+S+G+FGRK  R VRRD++SNGHEHAVGYVT
Sbjct: 130 FQLWSFSGESCPEGTIPIRRTTEEDVLRASSIGRFGRKVRRHVRRDSSSNGHEHAVGYVT 189

Query: 241 GDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEA--------------G 286
           GDQYYGAKASINVWAPRV NQYEFSLSQMWVISGSF    N  +A               
Sbjct: 190 GDQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFEYMRNPPQALPLRQALSFTIVSIS 249

Query: 287 WQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQ 346
           W VSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSY GGQ
Sbjct: 250 WIVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYKGGQ 309

Query: 347 FDISLLIWK 355
           FDISLL+WK
Sbjct: 310 FDISLLVWK 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524024|ref|XP_003530633.1| PREDICTED: uncharacterized protein LOC100792240 [Glycine max]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/326 (73%), Positives = 266/326 (81%), Gaps = 13/326 (3%)

Query: 33  QQQQHKCTETQTGFQKQTTTQGSFSNMTSSSCCKISPIIPIFVSYLLVLSSSICLVHSSD 92
           + +QHKC +  TG       + SF NM  S C + SPI  + V +L V S+ +C VHSS 
Sbjct: 23  ETRQHKCGQKHTG-------KRSFINMNFSLCLR-SPIASLLVHFLFVFST-LCSVHSSQ 73

Query: 93  TGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFD 152
            G +    NQT  RP+EEL KL  IR  L +INKP VKTIQSPDGDIIDCV +H+Q AFD
Sbjct: 74  FGDHHLVANQT-FRPKEELRKLNAIRNRLQRINKPPVKTIQSPDGDIIDCVVSHMQHAFD 132

Query: 153 HPKLKGQRPLDPPARPNGHN--PSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRAT 210
           HP LKGQ+PLDPP RP GHN    G ++E FQLWSFSGESCPEGTIPIRRTTEQD+LRAT
Sbjct: 133 HPLLKGQKPLDPPERPRGHNQMDDGDLSENFQLWSFSGESCPEGTIPIRRTTEQDMLRAT 192

Query: 211 SVGKFGRKKI-RRVRRDTNSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQM 269
           SV +FGRKKI  RVRRDT+ NGHEHA+GYVTGDQYYG+KASINVWAP V N YEFSLSQM
Sbjct: 193 SVRRFGRKKIINRVRRDTSGNGHEHAIGYVTGDQYYGSKASINVWAPLVENPYEFSLSQM 252

Query: 270 WVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNR 329
           WVISGSFGDDLNTIEAGWQVSPELYGD+YPRFFTYWTTDAYQATGCYNLLCSGFVQTN++
Sbjct: 253 WVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQATGCYNLLCSGFVQTNSK 312

Query: 330 IAIGAAISPTSSYNGGQFDISLLIWK 355
           IAIGAAISPTSSY+GGQFDISLLIWK
Sbjct: 313 IAIGAAISPTSSYSGGQFDISLLIWK 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522859|ref|XP_004168443.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101225720 [Cucumis sativus]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/298 (74%), Positives = 251/298 (84%), Gaps = 5/298 (1%)

Query: 59  MTSSSC-CKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFI 117
           M S+ C   I+P I IFV    +L+S+I  VHS         TNQT   P++EL+KLK I
Sbjct: 1   MASALCFINITPTILIFVLLFSLLASTITPVHSLQQ----RPTNQTDFHPQQELNKLKMI 56

Query: 118 RAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMI 177
           RAHL+KINKPA+ TIQSPDGDIIDCV +H QPAFDHPKL+GQ+PLDPP RP GH P    
Sbjct: 57  RAHLDKINKPAIHTIQSPDGDIIDCVLSHHQPAFDHPKLQGQKPLDPPERPQGHKPPRTE 116

Query: 178 TEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVG 237
           TE FQLWS SGE+CPEGT+PIRRTTE+D+LRATS   FGRK  + VRR+T+S+GHEHAVG
Sbjct: 117 TESFQLWSTSGENCPEGTVPIRRTTEEDILRATSFQMFGRKVRKWVRRETSSDGHEHAVG 176

Query: 238 YVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 297
           YVTG+ Y+GAKASINVWAPRV +QYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN
Sbjct: 177 YVTGEHYFGAKASINVWAPRVADQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 236

Query: 298 YPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           YPRFFTYWT+DAYQATGCYNLLCSGFVQTNN+IAIGAAISPTSS+ GGQFDISLL+WK
Sbjct: 237 YPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSFEGGQFDISLLVWK 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450440|ref|XP_004142970.1| PREDICTED: uncharacterized protein LOC101208399 [Cucumis sativus]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/298 (74%), Positives = 251/298 (84%), Gaps = 5/298 (1%)

Query: 59  MTSSSC-CKISPIIPIFVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFI 117
           M S+ C   I+P I IFV    +L+S+I  VHS         TNQT   P++EL+KLK I
Sbjct: 1   MASALCFINITPTILIFVLLFSLLASTITPVHSLQQ----RPTNQTDFHPQQELNKLKMI 56

Query: 118 RAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMI 177
           RAHL+KINKPA+ TIQSPDGDIIDCV +H QPAFDHPKL+GQ+PLDPP RP GH P    
Sbjct: 57  RAHLDKINKPAIHTIQSPDGDIIDCVLSHHQPAFDHPKLQGQKPLDPPERPQGHKPPRTE 116

Query: 178 TEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVG 237
           TE FQLWS SGE+CPEGT+PIRRTTE+D+LRATS   FGRK  + VRR+T+S+GHEHAVG
Sbjct: 117 TESFQLWSTSGENCPEGTVPIRRTTEEDILRATSFQMFGRKVRKWVRRETSSDGHEHAVG 176

Query: 238 YVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 297
           YVTG+ Y+GAKASINVWAPRV +QYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN
Sbjct: 177 YVTGEHYFGAKASINVWAPRVADQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDN 236

Query: 298 YPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           YPRFFTYWT+DAYQATGCYNLLCSGFVQTNN+IAIGAAISPTSS+ GGQFDISLL+WK
Sbjct: 237 YPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSFEGGQFDISLLVWK 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497508|ref|XP_003517602.1| PREDICTED: uncharacterized protein LOC100776639 [Glycine max]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/355 (69%), Positives = 279/355 (78%), Gaps = 14/355 (3%)

Query: 5   CWMDLVGVAFLCAKTRHKWYRFDHSRSRQQQ--QHKCTETQTGFQKQTTTQGSFSNMTSS 62
           CW+DLV      +K R+  + F H R ++++  Q +C ++ T    +T  Q + S+M  S
Sbjct: 2   CWIDLVE-----SKPRNTHFCFVHGRRKRRRRRQGQCEQSHTDLSIETKRQ-NLSSMDFS 55

Query: 63  SCCKISPIIPIFVSYLLVLSSSICLVHSSDTGK--NLNATNQTTLRPEEELHKLKFIRAH 120
            C   SPII   V +LLV +S  C V SSD G   N    NQT  +P+EE HK+  IR  
Sbjct: 56  LCLS-SPIISTLVHFLLV-ASLFCPVCSSDIGNIGNTPVANQT-FKPQEEAHKMNIIRTR 112

Query: 121 LNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEE 180
           L +INKPAVKTIQSPDGD+IDCV +H QPAFDHP LKG +PLDPP RP GHN   M +E 
Sbjct: 113 LQQINKPAVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNQMDM-SEN 171

Query: 181 FQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVT 240
           FQLW+ SGESCPEGTIPIRRTTEQD+LRA+SV +FGRK  RRVRRDTNSNGHEHAVGYV+
Sbjct: 172 FQLWTMSGESCPEGTIPIRRTTEQDMLRASSVSRFGRKIRRRVRRDTNSNGHEHAVGYVS 231

Query: 241 GDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPR 300
           G+QYYGAKASINVWAPRV NQ EFSLSQMWVISGSFGDDLNTIE+GWQVSPELYGD YPR
Sbjct: 232 GEQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIESGWQVSPELYGDRYPR 291

Query: 301 FFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           FFTYWT+DAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSY GGQFDISLLIWK
Sbjct: 292 FFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2019933	467	AT1G10750 [Arabidopsis thalian	0.719	0.588	0.748	4.5e-114
TAIR|locus:2026815	465	AT1G70550 [Arabidopsis thalian	0.735	0.604	0.740	2.6e-113
TAIR|locus:2028025	409	AT1G23340 "AT1G23340" [Arabido	0.719	0.672	0.720	2.6e-109
TAIR|locus:2170091	420	AT5G50150 "AT5G50150" [Arabido	0.725	0.659	0.689	6.5e-106
TAIR|locus:2092870	419	AT3G13510 [Arabidopsis thalian	0.628	0.572	0.600	1.4e-78
TAIR|locus:2035666	422	AT1G55360 [Arabidopsis thalian	0.623	0.563	0.589	6.3e-76
TAIR|locus:2167121	420	AT5G56530 "AT5G56530" [Arabido	0.623	0.566	0.564	1.5e-74
TAIR|locus:2050528	403	AT2G44220 [Arabidopsis thalian	0.620	0.588	0.5	1.6e-61
TAIR|locus:2050579	402	AT2G44240 [Arabidopsis thalian	0.633	0.601	0.5	3.4e-61
TAIR|locus:2146258	430	AT5G18460 [Arabidopsis thalian	0.510	0.453	0.568	9e-61

TAIR|locus:2019933 AT1G10750 [Arabidopsis thaliana (taxid:3702)]

 Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
 Identities = 211/282 (74%), Positives = 239/282 (84%)

Query:    74 FVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQ 133
             F+S LL+LSSS     SS   +NL+  NQT LRP +EL+KLK I  HL KINKP++KTI 
Sbjct:    68 FLS-LLLLSSSF----SSVLSENLSPRNQT-LRPLDELNKLKAINQHLRKINKPSIKTIH 121

Query:   134 SPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPE 193
             SPDGDIIDCV  H QPAFDHP L+GQ+PLDPP RP GHN  G+  + FQLW   GE+CPE
Sbjct:   122 SPDGDIIDCVLLHHQPAFDHPSLRGQKPLDPPERPRGHNRRGLRPKSFQLWGMEGETCPE 181

Query:   194 GTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASINV 253
             GT+PIRRT E+D+LRA SV  FG KK+R  RRDT+SNGHEHAVGYV+G++YYGAKASINV
Sbjct:   182 GTVPIRRTKEEDILRANSVSSFG-KKLRHYRRDTSSNGHEHAVGYVSGEKYYGAKASINV 240

Query:   254 WAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQAT 313
             WAP+V NQYEFSLSQ+W+ISGSFG+DLNTIEAGWQVSPELYGDNYPRFFTYWT DAYQAT
Sbjct:   241 WAPQVQNQYEFSLSQIWIISGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTNDAYQAT 300

Query:   314 GCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
             GCYNLLCSGFVQTN+ IAIGAAISP+SSY GGQFDI+LLIWK
Sbjct:   301 GCYNLLCSGFVQTNSEIAIGAAISPSSSYKGGQFDITLLIWK 342

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2026815 AT1G70550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1090 (388.8 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
 Identities = 211/285 (74%), Positives = 233/285 (81%)

Query:    74 FVSYLLVLSSSICLVHSS--DTGKNLNATN-QTTLRPEEELHKLKFIRAHLNKINKPAVK 130
             F S  L L   +CLV SS   T  + N+T    TLRP+EEL KL  IR  L+KINKPAVK
Sbjct:    57 FSSSFLRLILLLCLVSSSFSSTTSSSNSTAADQTLRPQEELQKLTLIRQELDKINKPAVK 116

Query:   131 TIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGES 190
             TIQS DGD IDCV TH QPAFDHP L+GQ+PLDPP  P G++      E  QLWS SGES
Sbjct:   117 TIQSSDGDKIDCVSTHQQPAFDHPLLQGQKPLDPPEIPKGYSEDDGSYENSQLWSLSGES 176

Query:   191 CPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKAS 250
             CPEGTIPIRRTTEQD+LRA+SV +FGRK IRRV+RD+ +NGHEHAVGYVTG QYYGAKAS
Sbjct:   177 CPEGTIPIRRTTEQDMLRASSVQRFGRK-IRRVKRDSTNNGHEHAVGYVTGRQYYGAKAS 235

Query:   251 INVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAY 310
             INVW+PRV +QYEFSLSQ+WVI+GSF  DLNTIEAGWQ+SPELYGD YPRFFTYWT+DAY
Sbjct:   236 INVWSPRVTSQYEFSLSQIWVIAGSFTHDLNTIEAGWQISPELYGDTYPRFFTYWTSDAY 295

Query:   311 QATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
             + TGCYNLLCSGFVQTN RIAIGAAISP SSY GGQFDISLLIWK
Sbjct:   296 RTTGCYNLLCSGFVQTNRRIAIGAAISPRSSYKGGQFDISLLIWK 340

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2028025 AT1G23340 "AT1G23340" [Arabidopsis thaliana (taxid:3702)]

 Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
 Identities = 204/283 (72%), Positives = 234/283 (82%)

Query:    74 FVSYLLVLSSSICLVHSSDTGKNLNATNQTT-LRPEEELHKLKFIRAHLNKINKPAVKTI 132
             F +++L+LS     + SS    + N+T++T  LRP+ E+ K+K IR  L KINKPA+KTI
Sbjct:     9 FFTFILLLS-----LFSSYASPS-NSTSETVPLRPQREIQKMKLIRKQLQKINKPAIKTI 62

Query:   133 QSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCP 192
              S DGD IDCV +H QPAFDHP L+GQRP+DPP  P G++      E FQLWS  GESCP
Sbjct:    63 HSSDGDTIDCVPSHHQPAFDHPLLQGQRPMDPPEMPIGYSQENESHENFQLWSLYGESCP 122

Query:   193 EGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASIN 252
             EGTIPIRRTTEQD+LRA SV +FGRK IRRVRRD++SNGHEHAVGYV+G QYYGAKASIN
Sbjct:   123 EGTIPIRRTTEQDMLRANSVRRFGRK-IRRVRRDSSSNGHEHAVGYVSGSQYYGAKASIN 181

Query:   253 VWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQA 312
             VW PRV++QYEFSLSQ+W+I+GSF  DLNTIEAGWQ+SPELYGD  PRFFTYWT+DAYQA
Sbjct:   182 VWTPRVISQYEFSLSQIWIIAGSFAGDLNTIEAGWQISPELYGDTNPRFFTYWTSDAYQA 241

Query:   313 TGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
             TGCYNLLCSGFVQTNNRIAIGAAISP SSY GGQFDISLLIWK
Sbjct:   242 TGCYNLLCSGFVQTNNRIAIGAAISPVSSYKGGQFDISLLIWK 284

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2170091 AT5G50150 "AT5G50150" [Arabidopsis thaliana (taxid:3702)]

 Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
 Identities = 195/283 (68%), Positives = 232/283 (81%)

Query:    74 FVSYLLVLSSSICLVHSSDTGKNLNATNQTTLRPEEELHKLKFIRAHLNKINKPAVKTIQ 133
             F+  +L+LS  + L+     G  ++  NQT+ RP  E+ KL+ + A+L+KINKP++KTI 
Sbjct:    18 FIGLMLLLSLQLDLL----LGSAIHLKNQTSFRPNREIQKLRRVEAYLSKINKPSIKTIH 73

Query:   134 SPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEEF-QLWSFSGESCP 192
             SPDGD+I+CV +HLQPAFDHP+L+GQ+PLD P RP+  N +    E F QLWS SGESCP
Sbjct:    74 SPDGDVIECVPSHLQPAFDHPQLQGQKPLDSPYRPSKGNET-TYEESFNQLWSMSGESCP 132

Query:   193 EGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDTNSNGHEHAVGYVTGDQYYGAKASIN 252
              G+IPIR+TT+ DVLRA SV +FGRK  R +RRD++  GHEHAV +V G+QYYGAKASIN
Sbjct:   133 IGSIPIRKTTKNDVLRANSVRRFGRKLRRPIRRDSSGGGHEHAVVFVNGEQYYGAKASIN 192

Query:   253 VWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQA 312
             VWAPRV + YEFSLSQ+W+ISGSFG DLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQA
Sbjct:   193 VWAPRVTDAYEFSLSQIWLISGSFGHDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQA 252

Query:   313 TGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
             TGCYNLLCSGFVQTNN+IAIGAAISP SSYNG QFDI L+IWK
Sbjct:   253 TGCYNLLCSGFVQTNNKIAIGAAISPRSSYNGRQFDIGLMIWK 295

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2092870 AT3G13510 [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 155/258 (60%), Positives = 187/258 (72%)

Query:   115 KF-IRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQR-PLDPPARPNG-- 170
             KF ++ HLN++NKP VKTIQSPDGDIIDC+    QPAFDHP LK  +  + P   P G  
Sbjct:    38 KFEVKKHLNRLNKPPVKTIQSPDGDIIDCIPISKQPAFDHPFLKDHKIQMRPSYHPEGLF 97

Query:   171 -HN-----PSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRV- 223
               N     P G  T   QLW   G+ C EGTIP+RRT E DVLRA+SV ++G+KK R V 
Sbjct:    98 DDNKVSAEPKGKETHIPQLWHRYGK-CTEGTIPMRRTREDDVLRASSVKRYGKKKHRSVP 156

Query:   224 -----RRDT-NSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFG 277
                    D  N NGH+HA+ YV GD+YYGAKA++NVW P++ N  EFSLSQ+W++ GSFG
Sbjct:   157 IPKSAEPDLINQNGHQHAIAYVEGDKYYGAKATLNVWEPKIQNTNEFSLSQIWLLGGSFG 216

Query:   278 DDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAIS 337
              DLN+IEAGWQVSP+LYGDN  R FTYWT+DAYQATGCYNLLCSGF+Q N+ IA+GA+IS
Sbjct:   217 QDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSDIAMGASIS 276

Query:   338 PTSSYNGGQFDISLLIWK 355
             P S Y   Q+DIS+LIWK
Sbjct:   277 PVSGYRNSQYDISILIWK 294

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

GO:0016246 "RNA interference" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2035666 AT1G55360 [Arabidopsis thaliana (taxid:3702)]

 Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
 Identities = 151/256 (58%), Positives = 184/256 (71%)

Query:   117 IRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQR-PLDPPARPNG---HN 172
             ++ HLN++NKPAVK+IQS DGD+IDCV    QPAFDHP LK  +  + P   P G    N
Sbjct:    43 VKKHLNRLNKPAVKSIQSSDGDVIDCVPISKQPAFDHPFLKDHKIQMKPNYHPEGLFDDN 102

Query:   173 ----PSGMITEEF--QLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRV--- 223
                 P     E    QLW   G+ C EGTIP+RRT E DVLRA+SV ++G+KK R V   
Sbjct:   103 KVSAPKSNEKEGHIPQLWHRYGK-CSEGTIPMRRTKEDDVLRASSVKRYGKKKRRSVPLP 161

Query:   224 ---RRDT-NSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDD 279
                  D  N +GH+HA+ YV GD+YYGAKA+INVW P++  Q EFSLSQ+W++ GSFG D
Sbjct:   162 KSAEPDLINQSGHQHAIAYVEGDKYYGAKATINVWEPKIQQQNEFSLSQIWLLGGSFGQD 221

Query:   280 LNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPT 339
             LN+IEAGWQVSP+LYGDN  R FTYWT+DAYQATGCYNLLCSGF+Q N+ IA+GA+ISP 
Sbjct:   222 LNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSDIAMGASISPV 281

Query:   340 SSYNGGQFDISLLIWK 355
             S Y   Q+DIS+LIWK
Sbjct:   282 SGYRNSQYDISILIWK 297

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2167121 AT5G56530 "AT5G56530" [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 144/255 (56%), Positives = 182/255 (71%)

Query:   117 IRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQR-PLDPPARPNG----- 170
             +  HLN++NKPAVK+IQSPDGDIIDCV    QPAFDHP LK  +  + P   P       
Sbjct:    42 VHKHLNRLNKPAVKSIQSPDGDIIDCVHISKQPAFDHPFLKDHKIQMGPSYTPESLFGES 101

Query:   171 ---HNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKI------R 221
                  P   +    QLW  +G  C EGTIP+RRT ++DVLRA+SV ++G+KK       R
Sbjct:   102 KVSEKPKESVNPITQLWHQNGV-CSEGTIPVRRTKKEDVLRASSVKRYGKKKHLSVPLPR 160

Query:   222 RVRRDT-NSNGHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDL 280
                 D  N +GH+HA+ YV G ++YGAKA+INVW P+V +  EFSLSQ+W++ GSFG DL
Sbjct:   161 SADPDLINQSGHQHAIAYVEGGKFYGAKATINVWEPKVQSSNEFSLSQLWILGGSFGQDL 220

Query:   281 NTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTS 340
             N+IEAGWQVSP+LYGDN  R FTYWT+DAYQATGCYNLLCSGF+Q N++IA+GA+ISP S
Sbjct:   221 NSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSQIAMGASISPVS 280

Query:   341 SYNGGQFDISLLIWK 355
              ++  Q+DIS+ IWK
Sbjct:   281 GFHNPQYDISITIWK 295

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2050528 AT2G44220 [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 126/252 (50%), Positives = 168/252 (66%)

Query:   113 KLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQ----RPLDPPARP 168
             ++K +R HL + NKPA+K+I+S DGD+IDCV    QPAFDH  LK      RP   P   
Sbjct:    32 EIKVLR-HLKRFNKPALKSIKSEDGDVIDCVPITNQPAFDHHLLKNHTIQMRPSFYPVSD 90

Query:   169 NGHNP--SGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRD 226
             + +    +  +T   Q+W  +GE CP+ T+PIRRT ++D+LR  S+  FGRK  + + R 
Sbjct:    91 STYTKREAKAVT---QVWHKAGE-CPKNTVPIRRTKKEDLLRPKSIRSFGRKSHQSIPRT 146

Query:   227 TNSN---GHEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTI 283
             T  +   GH++A+  V   ++YG + +IN+W P V    EFSL+Q WV+SG+ G  LNTI
Sbjct:   147 TTFDPTLGHQYALMGVRNGKFYGTEVAINLWKPYVQIPKEFSLAQTWVVSGN-GSSLNTI 205

Query:   284 EAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYN 343
             EAGWQV PELY DN PRFF YWT D Y+ TGCYNLLCSGFVQT+NR  +G +I+  S Y 
Sbjct:   206 EAGWQVYPELYDDNNPRFFVYWTRDGYRKTGCYNLLCSGFVQTSNRYTVGGSITTMSRYR 265

Query:   344 GGQFDISLLIWK 355
             G Q+D+S+LIWK
Sbjct:   266 GTQYDLSVLIWK 277

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2050579 AT2G44240 [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 125/250 (50%), Positives = 160/250 (64%)

Query:   112 HKLKFIRAHLNKINKPAVKTIQSPDGDIIDCVETHLQPAFDHPKLKGQR-PLDPPARPNG 170
             H+   ++  L ++NKPA+K+I+S DGDIIDCV    QPAFDHP LK     + P   P G
Sbjct:    30 HREIKVQRFLKQLNKPALKSIKSEDGDIIDCVLITSQPAFDHPLLKNHTIQVKPSFIPEG 89

Query:   171 HNPSGMITEEF---QLWSFSGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVRRDT 227
                S    +E    Q+W   GE CPE TIPIRRT ++++LRA S+  FG+K  + +  DT
Sbjct:    90 EGDSTYTKKETKATQVWQKYGE-CPENTIPIRRTKKEEILRAKSLESFGKKNHQYIPEDT 148

Query:   228 NSNG--HEHAVGYVTGDQYYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEA 285
             +S    HE+A   V   ++YG KASINVW P V    EFSLSQ W++SG  G   NTIEA
Sbjct:   149 SSPNYHHEYAFMGVRNGKFYGTKASINVWKPDVATPSEFSLSQTWIVSGD-GTSRNTIEA 207

Query:   286 GWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGG 345
             GWQV P +YG+N PR F YWT+D YQ TGCYNL+C GFVQT N+  +G +    S Y+G 
Sbjct:   208 GWQVYPGMYGNNDPRLFVYWTSDGYQKTGCYNLVCGGFVQTTNQYTVGGSYVTASQYDGA 267

Query:   346 QFDISLLIWK 355
             Q  ++LLIWK
Sbjct:   268 QLVLNLLIWK 277

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

TAIR|locus:2146258 AT5G18460 [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 120/211 (56%), Positives = 153/211 (72%)

Query:   154 PKLKGQRPLDPPARPNGHNPSGMITEEFQLWSFSGESCPEGTIPIRRTTEQDVLRATSVG 213
             PK+KG+   D   +        ++   +Q+W  +G  CP+GT+PIRR T  DVLRA S+ 
Sbjct:   102 PKMKGK---DDDVK----EAENVLEGAWQMWHVNGTRCPKGTVPIRRNTMNDVLRAKSLF 154

Query:   214 KFGRKKI------RRVRRDT-NSNGHEHAVGYV-TGDQYYGAKASINVWAPRVVNQYEFS 265
              FG+K+       R  + D   +NGHEHA+ Y  +  + YGAKA+INVW P++    EFS
Sbjct:   155 DFGKKRRSIYLDQRTEKPDALGTNGHEHAIAYTESSSEIYGAKATINVWDPKIEEVNEFS 214

Query:   266 LSQMWVISGSF-GDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFV 324
             LSQ+W++SGSF G DLN+IEAGWQVSPELYGDN PR FTYWT+D+YQATGCYNLLCSGF+
Sbjct:   215 LSQIWILSGSFVGPDLNSIEAGWQVSPELYGDNRPRLFTYWTSDSYQATGCYNLLCSGFI 274

Query:   325 QTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
             QTNN+IAIGAAISP S++ G QFDI++LIWK
Sbjct:   275 QTNNKIAIGAAISPLSTFKGNQFDITILIWK 305

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X000603 hypothetical protein (466 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
pfam03080	230	pfam03080, DUF239, Domain of unknown function (DUF	8e-64
pfam14365	117	pfam14365, DUF4409, Domain of unknown function (DU	3e-46

>gnl|CDD|217358 pfam03080, DUF239, Domain of unknown function (DUF239)

 Score =  203 bits (518), Expect = 8e-64
 Identities = 71/112 (63%), Positives = 89/112 (79%), Gaps = 1/112 (0%)

Query: 244 YYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFT 303
           YYGA+A+INV+ P+V N  +FSLSQ+W+++G    DLN+I+AGWQV+P LYGDN  R FT
Sbjct: 1   YYGAQATINVYNPKVQNPNQFSLSQIWIVNGPENGDLNSIQAGWQVNPSLYGDNRTRLFT 60

Query: 304 YWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYNGGQFDISLLIWK 355
           YW TD Y  TGCYNLLC GFVQ +++IA+G AISP S Y G Q+DI+LLIWK
Sbjct: 61  YW-TDGYNKTGCYNLLCPGFVQVSSKIALGGAISPVSVYGGKQYDITLLIWK 111

This is a family of plant and bacterial proteins, a small number of which are putative carboxy-terminal peptidases. Length = 230

>gnl|CDD|206533 pfam14365, DUF4409, Domain of unknown function (DUF4409)

 Score =  153 bits (390), Expect = 3e-46
 Identities = 65/119 (54%), Positives = 78/119 (65%), Gaps = 12/119 (10%)

Query: 131 TIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPSGMITEE----FQLWSF 186
           TIQSPDGDIIDCV+   QPAFDHP LK  + + P  RP G +      E      QLW  
Sbjct: 1   TIQSPDGDIIDCVDISKQPAFDHPLLKNHQ-MRPSERPEGLSNENESKENEKGFGQLWHN 59

Query: 187 SGESCPEGTIPIRRTTEQDVLRATSVGKFGRKKIRRVR------RDTNSNGHEHAVGYV 239
           +GE CPEGT+PIRRTT++D+LRA+SV +FG+KK R V        D + NGHEHAV YV
Sbjct: 60  NGE-CPEGTVPIRRTTKEDLLRASSVKRFGKKKRRSVPDPRKTKPDISQNGHEHAVAYV 117

Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
PF03080	229	DUF239: Domain of unknown function (DUF239); Inter	100.0
PF14365	117	DUF4409: Domain of unknown function (DUF4409)	100.0

>PF03080 DUF239: Domain of unknown function (DUF239); InterPro: IPR004314 This is a family of plant proteins, a small number of which are putative peptidases (see for example Q9XIN9 from SWISSPROT)

Probab=100.00  E-value=3.4e-48  Score=365.84  Aligned_cols=134  Identities=53%  Similarity=0.942  Sum_probs=127.6

Q ss_pred             eeeeEEEEEeeccccccCCccceeeeeeeeCcCCCCccEEEEeeEECccccCCCccEEEEEEccCCCCcccccccCCCce
Q 016821          244 YYGAKASINVWAPRVVNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGF  323 (382)
Q Consensus       244 yyGa~AtInVw~P~V~~~~qfSlsqIwv~sG~~~~~~nsIeaGW~V~P~lYGD~~pRlFtyWT~D~y~~TGCYNl~CpGF  323 (382)
                      |||++|+||||+|+|+.++|||++||||.+|..++.+|+|||||+|+|+||||++||||+|||+|+|++|||||++||||
T Consensus         1 y~G~~a~i~v~~p~v~~~~q~S~~~i~i~~g~~~~~~~~i~~GW~V~P~lygd~~~~lf~~wt~d~~~~tgCyN~~CpGF   80 (229)
T PF03080_consen    1 YYGARATISVWNPKVQQPDQFSLSQIWISNGSDDDSLNSIEAGWQVYPSLYGDSRTRLFVYWTADGYQKTGCYNLDCPGF   80 (229)
T ss_pred             CeeeEEEEECcCCccCCccceeheeEEEEecCCCCCCcEEEEeeeccccccCCCceEEEEEEEccCCCCcceeCCCCCcE
Confidence            79999999999999998779999999999997567799999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCccccccccCCCceEEEEEEEEEE-----eee-ecCccccccCcccccccc
Q 016821          324 VQTNNRIAIGAAISPTSSYNGGQFDISLLIWKL-----MVL-VTNRDKIRLPDPEFDLSR  377 (382)
Q Consensus       324 VQvs~~I~lG~~i~PvS~ygG~Qy~i~i~I~KD-----~~~-~~~~~~gy~p~~~f~~~~  377 (382)
                      |||+++|+||++|+|+|+++|.|++|.+.|+||     ||+ +.++.|||||++||+.++
T Consensus        81 Vq~s~~i~~G~~~~~~S~~gG~q~~i~~~i~kD~~~gnWWL~~~~~~IGYwP~sLF~~l~  140 (229)
T PF03080_consen   81 VQVSSSIALGAAISPVSTYGGKQYEITLSIFKDPKSGNWWLYYGGEPIGYWPKSLFTSLA  140 (229)
T ss_pred             EEeCCccccceeeCCCccCCCceEEEEEEEEecCCCccEEEEEecceeeeehHHhhhhhh
Confidence            999999999999999999999999999999997     665 677899999999999865

However, the structure of the protein PDB3:3eu8 has an alpha-alpha toroid fold and is similar to a glucoamylase, PDB:1ayx. Such glucoamylases are involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity. Further structural comparisons also show relationships with other glycohydrolases.

>PF14365 DUF4409: Domain of unknown function (DUF4409)

Probab=100.00  E-value=6.8e-39  Score=275.47  Aligned_cols=107  Identities=56%  Similarity=0.941  Sum_probs=87.7

Q ss_pred             EEeCCCCCeEEeeecCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCcccceeeeccCCCCCCCCceeeeecCchhh
Q 016821          131 TIQSPDGDIIDCVETHLQPAFDHPKLKGQRPLDPPARPNGHNPS----GMITEEFQLWSFSGESCPEGTIPIRRTTEQDV  206 (382)
Q Consensus       131 TIqs~DGDiiDCVdI~kQPAfdHPLLKNHkIq~pP~~p~~~~~~----~~~~~~~q~w~~~g~~CP~GTVPIrRtt~eDl  206 (382)
                      ||+|+||||||||||||||||||||||+|+ +.|++.|++....    .......|+|+.+| +||+|||||||+++|||
T Consensus         1 tI~s~dGdi~DCVdi~kQPAfdHPlLK~~q-~~Ps~~p~~~~~~~~~~~~~~~~~q~w~~~g-~CP~GTVPIrRtt~~dl   78 (117)
T PF14365_consen    1 TIQSPDGDIIDCVDIYKQPAFDHPLLKNIQ-MRPSSYPKGISSKESSSSSSKPISQLWHQNG-SCPEGTVPIRRTTKEDL   78 (117)
T ss_pred             CccCCCCCeEeCEeccccccccCchhcCcc-cCcchhhhhcccccccccccccchhhhcccc-CCcCCceeeecCCHHHH
Confidence            699999999999999999999999999654 3444677765543    22344579999888 89999999999999999


Q ss_pred             cccccccccccccccccc------ccCCCCCceeEEEEE
Q 016821          207 LRATSVGKFGRKKIRRVR------RDTNSNGHEHAVGYV  239 (382)
Q Consensus       207 lRa~S~~~fg~k~~~~~~------~~~~~~gHe~Av~~~  239 (382)
                      +||+|+.+||+|.+....      .+.+.+|||||++|+
T Consensus        79 lr~~s~~~~g~k~~~~~~~~~~~~~~~~~~gH~~Aia~~  117 (117)
T PF14365_consen   79 LRAKSFKRFGRKPPSSISSPSSNKPDISSNGHEHAIAYV  117 (117)
T ss_pred             hhhhhHHHcCCcCCCCcCCccccCCCCCCCCCceEEEeC
Confidence            999999999999765432      234677999999985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00