Citrus Sinensis ID: 016823

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
MVKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
cccccccHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEHHHHHHHccccEEEccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHcccHcHcccHHHHcccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccc
mvketeyydvlgvsptaseaEIKKAYYIKVLGEAYqvlsdpaqrqaydaygksgisteaiiDPAAIFAMLFGSELFEDYIGQLAMASVAsldiftegeefdAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAksnngsegetvlsggvhklngsdscydasspitspkstehqessqsafasqspyveapnlsdaqfgrdfpiptappgaqghsstgke
mvketeyydvlgvsptaseaeIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIfqraksnngsegeTVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPtappgaqghsstgke
MVKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTeeeleeYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNakkeelrarakalkTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQEssqsafasqsPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
******YYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEF*******************LADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQ***********************SHKKLMIDSLWKLNVADIEATLSRVCQMVLQD****************************************************************************************************************
*VKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGI***********FAMLFGSELFEDYIGQLA**********************DKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEA***************NTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGA******************************SHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK***************************************************************NLSDAQFGRDFP*****************
MVKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDA*************************YVEAPNLSDAQFGRDFPIPTAP************
***ETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKS***********************************************SQSPYVEAPNLSDAQFGRDFPIPTAP************
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MVKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDxxxxxxxxxxxxxxxxxxxxxILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVxxxxxxxxxxxxxxxxxxxxxGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQSAFASQSPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTGKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query382 2.2.26 [Sep-21-2011]
Q8GYX8398 Chaperone protein dnaJ 10 no no 0.984 0.944 0.7 1e-146
P39101391 Protein CAJ1 OS=Saccharom yes no 0.767 0.749 0.258 6e-22
O59731355 Uncharacterized J domain- yes no 0.787 0.847 0.244 9e-17
P40564432 DnaJ-like protein 1 OS=Sa no no 0.222 0.196 0.424 4e-12
Q10209392 Uncharacterized J domain- no no 0.753 0.734 0.225 5e-11
Q8IM77492 Uncharacterized J domain- no no 0.410 0.319 0.280 6e-10
Q8WW22397 DnaJ homolog subfamily A yes no 0.191 0.183 0.410 9e-10
Q9JMC3397 DnaJ homolog subfamily A yes no 0.188 0.181 0.414 1e-09
P13830 1073 Ring-infected erythrocyte N/A no 0.746 0.265 0.225 2e-09
Q5NVI9396 DnaJ homolog subfamily A no no 0.191 0.184 0.393 5e-09
>sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2 Back     alignment and function desciption
 Score =  517 bits (1331), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/400 (70%), Positives = 321/400 (80%), Gaps = 24/400 (6%)

Query: 1   MVKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSD 40
           MVKETEYYDVLGVSPTA+E+EIKKAYYIK                    VLGEAYQVLSD
Sbjct: 1   MVKETEYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSD 60

Query: 41  PAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEF 100
             QRQAYDA GKSGIST+AIIDPAAIFAMLFGSELFE YIGQLAMAS+ASLDIFTEG++F
Sbjct: 61  SGQRQAYDACGKSGISTDAIIDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQF 120

Query: 101 DAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDML 160
           D KK+Q+K+++VQKERE+KLA IL+ RLN+YV  NK++FI+ AEAEV+RLSNAAYGVDML
Sbjct: 121 DTKKIQEKLRIVQKEREDKLAQILKDRLNEYVI-NKDEFISNAEAEVARLSNAAYGVDML 179

Query: 161 NTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKK 220
           NTIGYIY RQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQ+TAATGA AL QLQE+MK+
Sbjct: 180 NTIGYIYVRQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKR 239

Query: 221 QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRA 280
           QL+ EGNYTEEELEEY+Q+HK++MIDSLWKLNVADIEATL RVCQ+VLQD  AK+EELR 
Sbjct: 240 QLNTEGNYTEEELEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRT 299

Query: 281 RAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQ 340
           RA+ LK LG+IFQRAK+   SE + + +    KLNG+   +D  +  TSPKS+E   S+ 
Sbjct: 300 RARGLKALGRIFQRAKT--ASESDPLENSEPQKLNGNGKNHDEDTS-TSPKSSEASHSTS 356

Query: 341 SAFASQSPYVEAPNLSDAQFGRDFPIPTAPPGAQGHSSTG 380
                QSPYVE   L D QF   FP P  PPGA  +SS+G
Sbjct: 357 GPQEPQSPYVEEFKLGDEQFNYYFPRPAPPPGAGKYSSSG 396
Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAJ1 PE=1 SV=1 Back     alignment and function description
>sp|O59731|YHXB_SCHPO Uncharacterized J domain-containing protein C3E7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3E7.11c PE=3 SV=1 Back     alignment and function description
>sp|P40564|DJP1_YEAST DnaJ-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DJP1 PE=1 SV=1 Back     alignment and function description
>sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.01 PE=1 SV=1 Back     alignment and function description
>sp|Q8IM77|YPFJ1_PLAF7 Uncharacterized J domain-containing protein PF14_0013 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0013 PE=4 SV=2 Back     alignment and function description
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1 Back     alignment and function description
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1 Back     alignment and function description
>sp|P13830|RESA_PLAFF Ring-infected erythrocyte surface antigen OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=RESA PE=2 SV=1 Back     alignment and function description
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
225457731405 PREDICTED: chaperone protein dnaJ 10 [Vi 1.0 0.943 0.809 0.0
255539400400 Chaperone protein dnaJ, putative [Ricinu 0.994 0.95 0.818 1e-180
224086162414 predicted protein [Populus trichocarpa] 0.994 0.917 0.779 1e-176
356497524395 PREDICTED: chaperone protein dnaJ 10-lik 0.981 0.949 0.786 1e-172
224061787374 predicted protein [Populus trichocarpa] 0.929 0.949 0.828 1e-170
147797970 996 hypothetical protein VITISV_028729 [Viti 0.840 0.322 0.872 1e-163
297850538391 DNAJ heat shock N-terminal domain-contai 0.971 0.948 0.705 1e-153
18394951391 DNAJ heat shock N-terminal domain-contai 0.971 0.948 0.705 1e-152
334182734400 DNAJ heat shock N-terminal domain-contai 0.971 0.927 0.692 1e-151
57340266390 DnaJ-like protein [Brassica juncea] 0.968 0.948 0.697 1e-150
>gi|225457731|ref|XP_002278176.1| PREDICTED: chaperone protein dnaJ 10 [Vitis vinifera] gi|297745644|emb|CBI40809.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/405 (80%), Positives = 359/405 (88%), Gaps = 23/405 (5%)

Query: 1   MVKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSD 40
           MVKETEYYDVLG+SP+A+EAEIKKAYYIK                    VLGEAYQVLSD
Sbjct: 1   MVKETEYYDVLGISPSATEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSD 60

Query: 41  PAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEF 100
           P+QRQAYDA+GKSGIST++II+PAAIFAMLFGSELFE+YIGQLAMAS+ASLDIFTEGE+F
Sbjct: 61  PSQRQAYDAHGKSGISTDSIIEPAAIFAMLFGSELFEEYIGQLAMASMASLDIFTEGEQF 120

Query: 101 DAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDML 160
           DAKKLQ+KM+VVQKEREEKLADIL+ RLNQYVQGNKEDF+N+AEAE+SRLSNAAYGVDML
Sbjct: 121 DAKKLQEKMRVVQKEREEKLADILKDRLNQYVQGNKEDFVNHAEAELSRLSNAAYGVDML 180

Query: 161 NTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKK 220
           NTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKK
Sbjct: 181 NTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKK 240

Query: 221 QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRA 280
           QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNN KKEELRA
Sbjct: 241 QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNCKKEELRA 300

Query: 281 RAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQESSQ 340
           RAK LKTLGKIFQR KS+NG+E E +L+  VHKLNGS+  +DA SP TSPKS+  +E S 
Sbjct: 301 RAKGLKTLGKIFQRVKSSNGNEDEAMLNSAVHKLNGSEPSHDACSPSTSPKSSNLEEQSY 360

Query: 341 SAFAS--QSPYVEAPNLSDAQFG-RDFPIPTAPPGAQGHSSTGKE 382
           +AFAS  QSPYVEAP  + AQ+   +FP+PTAPPGAQ  SSTG+E
Sbjct: 361 TAFASQFQSPYVEAPQFAGAQYNYSNFPMPTAPPGAQRDSSTGRE 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255539400|ref|XP_002510765.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|223551466|gb|EEF52952.1| Chaperone protein dnaJ, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224086162|ref|XP_002307837.1| predicted protein [Populus trichocarpa] gi|222857286|gb|EEE94833.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497524|ref|XP_003517610.1| PREDICTED: chaperone protein dnaJ 10-like [Glycine max] Back     alignment and taxonomy information
>gi|224061787|ref|XP_002300601.1| predicted protein [Populus trichocarpa] gi|222842327|gb|EEE79874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147797970|emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297850538|ref|XP_002893150.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338992|gb|EFH69409.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18394951|ref|NP_564134.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|8886993|gb|AAF80653.1|AC012190_9 Similar to a dnaJ-like protein from Arabidopsis thaliana gb|Y11969. It contains a DnaJ domain PF|00226. EST gb|H37613 comes from this gene [Arabidopsis thaliana] gi|15028271|gb|AAK76724.1| unknown protein [Arabidopsis thaliana] gi|332191939|gb|AEE30060.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334182734|ref|NP_001185052.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|332191941|gb|AEE30062.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|57340266|gb|AAW50121.1| DnaJ-like protein [Brassica juncea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
TAIR|locus:2030101398 AT1G76700 [Arabidopsis thalian 0.981 0.942 0.630 6.9e-118
TAIR|locus:2025252379 AT1G77020 [Arabidopsis thalian 0.845 0.852 0.490 1.3e-77
TAIR|locus:2136378345 AT4G39150 [Arabidopsis thalian 0.767 0.849 0.468 1e-68
TAIR|locus:2050120346 AT2G21510 [Arabidopsis thalian 0.772 0.852 0.461 4.4e-68
DICTYBASE|DDB_G0267994408 DDB_G0267994 "DNAJ heat shock 0.683 0.639 0.295 1.4e-25
CGD|CAL0003840 508 DJP1 [Candida albicans (taxid: 0.277 0.208 0.370 3.4e-14
UNIPROTKB|Q59NB9 508 DJP1 "Potential peroxisomal pr 0.277 0.208 0.370 3.4e-14
CGD|CAL0002990461 orf19.1267 [Candida albicans ( 0.280 0.232 0.336 8.7e-14
UNIPROTKB|Q5A441461 DJP2 "Potential peroxisomal pr 0.280 0.232 0.336 8.7e-14
ASPGD|ASPL0000040613466 AN3375 [Emericella nidulans (t 0.526 0.431 0.244 1.7e-13
TAIR|locus:2030101 AT1G76700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
 Identities = 239/379 (63%), Positives = 282/379 (74%)

Query:     2 VKETEYYDVLGVSPTASEAEIKKAYYIKVLGEAYQVLSDPAQRQAYDAYGKSGISTEAII 61
             +K+  Y     V P  +  + + A+  +VLGEAYQVLSD  QRQAYDA GKSGIST+AII
Sbjct:    22 IKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKSGISTDAII 81

Query:    62 DPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLA 121
             DPAAIFAMLFGSELFE YIGQLAMAS+ASLDIFTEG++FD KK+Q+K+++VQKERE+KLA
Sbjct:    82 DPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTKKIQEKLRIVQKEREDKLA 141

Query:   122 DILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIY 181
              IL+ RLN+YV  NK++FI+ AEAEV+RLSNAAYGVDMLNTIGYIY RQAAKELGKKAIY
Sbjct:   142 QILKDRLNEYVI-NKDEFISNAEAEVARLSNAAYGVDMLNTIGYIYVRQAAKELGKKAIY 200

Query:   182 LGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTXXXXXXYMQSHK 241
             LGVPFIAEWFRNKGHFIKSQ+TAATGA AL QLQE+MK+QL+ EGNYT      Y+Q+HK
Sbjct:   201 LGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKRQLNTEGNYTEEELEEYLQAHK 260

Query:   242 KLMIDSLWKLNVADIEATLSRVCQMVLQDNNXXXXXXXXXXXXXXTLGKIFQRAKSNNGS 301
             ++MIDSLWKLNVADIEATL RVCQ+VLQD                 LG+IFQRAK+   S
Sbjct:   261 RVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKALGRIFQRAKT--AS 318

Query:   302 EGETVLSGGVHKLNGSDSCYDASSPITSPKSTEHQEXXXXXXXXXXPYVEAPNLSDAQFG 361
             E + + +    KLNG+   +D  +  TSPKS+E             PYVE   L D QF 
Sbjct:   319 ESDPLENSEPQKLNGNGKNHDEDTS-TSPKSSEASHSTSGPQEPQSPYVEEFKLGDEQFN 377

Query:   362 RDFPIPTAPPGAQGHSSTG 380
               FP P  PPGA  +SS+G
Sbjct:   378 YYFPRPAPPPGAGKYSSSG 396
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0048527 "lateral root development" evidence=RCA
TAIR|locus:2025252 AT1G77020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136378 AT4G39150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050120 AT2G21510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267994 DDB_G0267994 "DNAJ heat shock N-terminal domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0003840 DJP1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59NB9 DJP1 "Potential peroxisomal protein import protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
CGD|CAL0002990 orf19.1267 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A441 DJP2 "Potential peroxisomal protein import protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000040613 AN3375 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002982001
SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (356 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
pfam14308204 pfam14308, DnaJ-X, X-domain of DnaJ-containing 2e-78
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 9e-16
pfam0022663 pfam00226, DnaJ, DnaJ domain 3e-13
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 4e-13
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 4e-13
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 9e-13
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 6e-12
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 7e-11
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 2e-10
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 6e-10
PTZ00475282 PTZ00475, PTZ00475, RESA-like protein; Provisional 8e-10
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 1e-09
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 1e-09
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 3e-09
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 6e-09
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 8e-09
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 1e-08
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 1e-08
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 2e-08
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 2e-08
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 2e-08
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 3e-08
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 3e-08
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 4e-08
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 6e-08
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 1e-07
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 1e-07
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 3e-07
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 4e-07
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 6e-07
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 4e-06
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 4e-06
PRK14296372 PRK14296, PRK14296, chaperone protein DnaJ; Provis 8e-06
PRK14300372 PRK14300, PRK14300, chaperone protein DnaJ; Provis 1e-05
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 2e-05
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 5e-04
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 6e-04
PRK10266306 PRK10266, PRK10266, curved DNA-binding protein Cbp 0.003
>gnl|CDD|222667 pfam14308, DnaJ-X, X-domain of DnaJ-containing Back     alignment and domain information 
 Score =  239 bits (613), Expect = 2e-78
 Identities = 77/194 (39%), Positives = 114/194 (58%)

Query: 111 VVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQ 170
             QKEREE+LA+ LR RL+ YV+G+K++F    E E   L   ++G+++L+TIG++Y  +
Sbjct: 1   EEQKEREEELAEKLRDRLSPYVEGDKDEFREKLEQEAEDLKMESFGLEILHTIGWVYENK 60

Query: 171 AAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTE 230
           A   LGKK  +LG+  I    ++KG  +KS     + A+      E+MKK     G  TE
Sbjct: 61  ANSFLGKKKTFLGISGIFTSVKDKGRSVKSTFNTLSSALDAQSTMEEMKKLEEKGGELTE 120

Query: 231 EELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK 290
           EEL E  +     ++ + W ++  DIE+TL  VC  VL+D +  K+E   RA+AL  LGK
Sbjct: 121 EELAEMEEKVTGKILAAAWAISKFDIESTLREVCDKVLKDKSVDKKERIKRAEALLILGK 180

Query: 291 IFQRAKSNNGSEGE 304
           IFQ+AK +   E E
Sbjct: 181 IFQKAKRSPEEEEE 194

IN certain plant and yeast proteins, the DnaJ-1 proteins have a three-domain structure. The x-domain lies between the N-terminal DnaJ and the C-terminal Z domains. The exact function is not known. Length = 204
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|185654 PTZ00475, PTZ00475, RESA-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 382
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 100.0
PF14308204 DnaJ-X: X-domain of DnaJ-containing 100.0
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
PTZ00475282 RESA-like protein; Provisional 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.73
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 99.6
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 99.57
PTZ00037421 DnaJ_C chaperone protein; Provisional 99.52
PRK14296372 chaperone protein DnaJ; Provisional 99.51
PRK14288369 chaperone protein DnaJ; Provisional 99.5
PRK14286372 chaperone protein DnaJ; Provisional 99.49
PRK14287371 chaperone protein DnaJ; Provisional 99.47
PRK14276380 chaperone protein DnaJ; Provisional 99.47
PRK14298377 chaperone protein DnaJ; Provisional 99.47
PRK14282369 chaperone protein DnaJ; Provisional 99.45
PRK14277386 chaperone protein DnaJ; Provisional 99.43
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.43
PRK14280376 chaperone protein DnaJ; Provisional 99.42
PRK14299291 chaperone protein DnaJ; Provisional 99.42
PRK14297380 chaperone protein DnaJ; Provisional 99.42
PRK14283378 chaperone protein DnaJ; Provisional 99.42
PRK14294366 chaperone protein DnaJ; Provisional 99.4
PRK14285365 chaperone protein DnaJ; Provisional 99.4
PRK14278378 chaperone protein DnaJ; Provisional 99.39
PRK14279392 chaperone protein DnaJ; Provisional 99.37
PHA03102153 Small T antigen; Reviewed 99.37
PRK14284391 chaperone protein DnaJ; Provisional 99.37
PRK14291382 chaperone protein DnaJ; Provisional 99.36
PRK10767371 chaperone protein DnaJ; Provisional 99.35
PRK14292371 chaperone protein DnaJ; Provisional 99.34
PRK14295389 chaperone protein DnaJ; Provisional 99.34
PRK14290365 chaperone protein DnaJ; Provisional 99.34
PRK14301373 chaperone protein DnaJ; Provisional 99.34
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.31
PRK14289386 chaperone protein DnaJ; Provisional 99.29
PRK14281397 chaperone protein DnaJ; Provisional 99.29
PRK14300372 chaperone protein DnaJ; Provisional 99.26
PRK14293374 chaperone protein DnaJ; Provisional 99.25
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.25
PRK10266306 curved DNA-binding protein CbpA; Provisional 99.22
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.18
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.09
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.09
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.06
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.0
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 98.81
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 98.81
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 98.71
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 98.67
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 98.64
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 98.56
PRK00294173 hscB co-chaperone HscB; Provisional 98.56
PRK03578176 hscB co-chaperone HscB; Provisional 98.54
PRK01356166 hscB co-chaperone HscB; Provisional 98.5
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 98.49
PRK05014171 hscB co-chaperone HscB; Provisional 98.49
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 98.25
PHA02624 647 large T antigen; Provisional 98.11
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 98.03
PTZ00100116 DnaJ chaperone protein; Provisional 97.99
PRK01773173 hscB co-chaperone HscB; Provisional 97.94
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 97.77
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 97.12
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 96.46
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 95.64
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 95.34
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 94.16
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 88.42
KOG0917 338 consensus Uncharacterized conserved protein [Funct 82.32
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-57  Score=486.80  Aligned_cols=301  Identities=19%  Similarity=0.343  Sum_probs=254.0

Q ss_pred             CCCCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCcc
Q 016823            1 MVKETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAII   61 (382)
Q Consensus         1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~~   61 (382)
                      |+++++||+||||+++||..+||+|||++                   .|++||+|||||.+|+.||.+|..++..++++
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~i  648 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFI  648 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCcc
Confidence            57899999999999999999999999997                   89999999999999999999999999888999


Q ss_pred             ChHHHHhhhhCCchhhhhhhhhhhhhhhhccc----cccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChh
Q 016823           62 DPAAIFAMLFGSELFEDYIGQLAMASVASLDI----FTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKE  137 (382)
Q Consensus        62 d~~~~f~~~Fg~~~f~~~iG~~~~~~~~~~~~----~~~~~~~~~~~~~e~~~~~qk~Re~~La~~L~~rL~~yv~g~~~  137 (382)
                      ||..|| ++||++.|.+|||.+.++++.....    ...+.....+.+++.|++.|++|+.+||..|++||++||+|+. 
T Consensus       649 DP~~Ff-mlFgse~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~~QkeRE~kLA~~LkdRL~~YVdgd~-  726 (1136)
T PTZ00341        649 HPSIFY-LLASLEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQYQKEREAHISENLINILQPCIAGDR-  726 (1136)
T ss_pred             CHHHHH-HHhhhHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-
Confidence            999777 7899999999999999987654211    1111111235678889999999999999999999999999886 


Q ss_pred             hHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHHhhhhcccccCcchhHHHhhccchhHHHHHHHHHHHH-HHHHHHH
Q 016823          138 DFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAI-ALIQLQE  216 (382)
Q Consensus       138 ~f~~~~~~E~~~L~~~sfG~~il~~IG~vY~~~A~~~Lg~~~~~lG~~~~~~~~r~kg~~~K~~~~~~~~A~-~~~~~~~  216 (382)
                      .|...++.||+.|+.+|||..|||+|||+|.++|..|||+.++  |+++++++++.++.+++++++.+.+++ .++..++
T Consensus       727 ~w~~~~e~Ei~~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~lkda~~t~e  804 (1136)
T PTZ00341        727 KWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNILKEYFGNNE  804 (1136)
T ss_pred             HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHH
Confidence            5999999999999999999999999999999999999998765  677888888999988888887777766 5555555


Q ss_pred             HHHHhhhhc----------------CCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 016823          217 DMKKQLSAE----------------GNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRA  280 (382)
Q Consensus       217 ~~~k~~~~~----------------~~~~eee~~~~~~~~~~~iL~alW~~~~~DIE~TLr~VC~kVL~D~~V~~e~R~k  280 (382)
                      .+.+.....                ..++.+    .+...++++|.++|+++++|||+|||.||++||.|++||+++|++
T Consensus       805 q~nki~~n~En~t~~~~nen~~k~i~~l~~e----ee~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~ktRik  880 (1136)
T PTZ00341        805 QINSITYNFENINLNEDNENGSKKILDLNHK----DQKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKK  880 (1136)
T ss_pred             HHHHhhhhhcccccccccccccccccccCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHH
Confidence            554332100                011222    145567999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCcccccc
Q 016823          281 RAKALKTLGKIFQRAKSNNGSEGETVLSG  309 (382)
Q Consensus       281 RAeAL~~LG~if~~~~~~~~e~~~~~~~~  309 (382)
                      ||+||++||.+|+++......+..++-.+
T Consensus       881 RAeaLkiLG~iMqk~a~~~K~~KK~kK~D  909 (1136)
T PTZ00341        881 RAESLKKLANAIEKYAGGGKKDKKAKKKD  909 (1136)
T ss_pred             HHHHHHHHHHHHHHHHhhccccccccccc
Confidence            99999999999999998877766555443

>PF14308 DnaJ-X: X-domain of DnaJ-containing Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00475 RESA-like protein; Provisional Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0917 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
2o37_A92 J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S 1e-08
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 8e-08
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 2e-07
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 1e-05
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 1e-05
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 1e-05
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 2e-05
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 7e-05
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 1e-04
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 1e-04
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 2e-04
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 Back     alignment and structure 
Iteration: 1

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 17/68 (25%)
Query: 1  MVKETEYYDVLGVSPTASEAEIKKAYY-----------------IKVLGEAYQVLSDPAQ 43
          MVKET+ YD+LGVSP+A+E E+KK Y                   K + EA+++L+DP +
Sbjct: 4  MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQK 63
Query: 44 RQAYDAYG 51
          R+ YD YG
Sbjct: 64 REIYDQYG 71
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 5e-18
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 1e-17
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 1e-15
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 3e-15
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 9e-15
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 3e-14
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 4e-14
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 4e-14
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 9e-14
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 1e-13
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 2e-13
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 2e-13
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 2e-13
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 2e-13
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 3e-13
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 3e-13
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 6e-13
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 6e-13
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 1e-12
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 3e-12
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 9e-11
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 2e-09
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 1e-07
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 2e-06
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 3e-05
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 2e-04
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 5e-04
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
 Score = 76.9 bits (190), Expect = 5e-18
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 17/69 (24%)

Query: 1  MVKETEYYDVLGVSPTASEAEIKKAYY-----------------IKVLGEAYQVLSDPAQ 43
          MVKET YYDVLGV P AS+ E+KKAY                   K + +AY+VLSD  +
Sbjct: 4  MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKK 63

Query: 44 RQAYDAYGK 52
          RQ YD  G+
Sbjct: 64 RQIYDQGGE 72
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.48
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.43
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.42
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.39
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.38
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.38
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.38
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.35
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.32
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.31
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.31
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.29
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.29
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.27
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.26
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.26
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.24
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 99.23
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.14
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.13
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.12
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.09
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.07
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.02
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 98.92
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 98.91
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 98.88
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 98.79
2guz_A71 Mitochondrial import inner membrane translocase su 98.61
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 98.54
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 98.49
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 98.42
2guz_B65 Mitochondrial import inner membrane translocase su 97.3
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 96.51
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
Probab=99.48  E-value=2.7e-14  Score=110.59  Aligned_cols=52  Identities=60%  Similarity=0.892  Sum_probs=47.6

Q ss_pred             CCCCCCcccccCCCCCCCHHHHHHHHHHh-----------------HHHHHHHHcCChhHHHHHHhhCC
Q 016823            1 MVKETEYYDVLGVSPTASEAEIKKAYYIK-----------------VLGEAYQVLSDPAQRQAYDAYGK   52 (382)
Q Consensus         1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~-----------------~i~eAY~vLsD~~~R~~YD~~G~   52 (382)
                      |+.+.+||+||||+++|+..+||+|||++                 .|++||+||+||.+|..||.+|.
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            77889999999999999999999999986                 89999999999999999999985
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 382
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 3e-11
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 6e-11
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 1e-10
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 1e-09
d1gh6a_114 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 5e-09
d1iura_88 a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human 1e-07
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 1e-07
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 4e-07
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 20/69 (28%)

Query: 7  YYDVLGVSPTASEAEIKKAYYI--------------------KVLGEAYQVLSDPAQRQA 46
          YY++LGVS TA E EI+KAY                      K + EAY+VL+D  +R A
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 47 YDAYGKSGI 55
          YD YG +  
Sbjct: 65 YDQYGHAAF 73
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.6
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.55
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.34
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.32
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.07
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 98.95
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 98.63
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 98.41
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=4.4e-16  Score=120.09  Aligned_cols=52  Identities=50%  Similarity=0.855  Sum_probs=49.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823            4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI   55 (382)
Q Consensus         4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~   55 (382)
                      ..|||+||||+++||.+|||+|||++                    .|++||+||+||.+|..||++|..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            57999999999999999999999997                    89999999999999999999998765
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure