Citrus Sinensis ID: 016908

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
cccccccEEEEEEccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccEEccEEEEcccccccccEEEEEEEccccEEEEcccccccccccccccEEEccEEEEccccEEEcccccccccccEEEEEEEEcccccccEEEEEEEEEEEcccccccccccccccEEEcccccccccccccccccccccccccEEEccEEEEEEEEEEcc
cccccccEEEEEEccccHHHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHcccccccHcccHHHHcccccccEEEEEcccccEEEEEEcccHHHHHHHcccccEEEEEEEcccccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEEEccccccEEEEEcccEEEccccccccccccccccHHHHcccccEEEccEEEEEEEEEEcc
MKESEQRHVALRINASEEAALMELLNFMYsntlsttaaPALLDVLMAADKFEVASCMRYCSRllrnmpmtpeSALLYLelpssvlmgeavqPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAIlssddlqiasEDAVYDFVLKWARAQYPRVEERREVLGSRLARfirfphmtcRKLKKvltcndfdhDVASKLVLEALFFkaeaphrqrtlaaeESVTLNRRFVEraykyrpvkvveferprqqCVVYLDLKreecenlfpsgrvysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYefaarskpteefvskykgnytftggkavgyrnlfaipwtsfmaddsLYFINGILHLRAELTIRH
MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARaqyprveerrEVLGsrlarfirfphmtCRKLKKVLTCNDFDHDVASKLVLEALFFKAeaphrqrtlaaeesvtlnrrfveraykyrpvkvveferprqQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAarskpteefvskyKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
************INASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELT***
******RH***RINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFF*******************NRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR*
*********ALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
*****QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
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MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query380 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 0.997 0.675 0.870 0.0
O82343561 BTB/POZ domain-containing no no 0.997 0.675 0.868 0.0
O04615527 BTB/POZ domain-containing no no 0.997 0.719 0.642 1e-138
Q3ZB90 623 Kelch repeat and BTB doma yes no 0.539 0.329 0.254 3e-06
Q8NFY9 601 Kelch repeat and BTB doma yes no 0.447 0.282 0.260 3e-06
B1H285 575 Kelch repeat and BTB doma no no 0.426 0.281 0.261 6e-06
Q8K430 640 Kelch-like protein 17 OS= no no 0.421 0.25 0.283 7e-06
Q6TDP3 640 Kelch-like protein 17 OS= yes no 0.421 0.25 0.283 7e-06
Q6TDP4 642 Kelch-like protein 17 OS= no no 0.421 0.249 0.283 8e-06
Q3UQV5 599 Kelch repeat and BTB doma no no 0.447 0.283 0.255 1e-05
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/379 (87%), Positives = 359/379 (94%)

Query: 1   MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYC 60
           M+ESEQRHV LRINASEEAALMELLNFMYSN +S T APALLDVLMAADKFEVASCMRYC
Sbjct: 178 MRESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYC 237

Query: 61  SRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPL 120
           SRLLRNMPMTPESALLYLELPSSVLM +AVQPLTDAA+Q+LA+RYKD+TKF +EVM+LPL
Sbjct: 238 SRLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPL 297

Query: 121 AGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKL 180
           AG+EAILSSD+LQIASEDAVYDF+LKWARAQYP +EERRE+LGSRLA  IRFP MTCRKL
Sbjct: 298 AGIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKL 357

Query: 181 KKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVV 240
           KKVLTC+DF+H++ASKLVLEALFFKAEAPHRQR+LA+EES +LNRR +ERAYKYRPVKVV
Sbjct: 358 KKVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVV 417

Query: 241 EFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 300
           EFE PR QCVVYLDLKREEC  LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL
Sbjct: 418 EFELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 477

Query: 301 FLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAD 360
           FLGMQEKGSVSF VDYEF+ARSKP E+F+SKYKGNYTFTGGKAVGYRNLF +PWTSF+A+
Sbjct: 478 FLGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAE 537

Query: 361 DSLYFINGILHLRAELTIR 379
           DS YFINGILHLRAELTI+
Sbjct: 538 DSQYFINGILHLRAELTIK 556
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|Q3ZB90|KBTBC_DANRE Kelch repeat and BTB domain-containing protein 12 OS=Danio rerio GN=kbtbd12 PE=2 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q8K430|KLH17_RAT Kelch-like protein 17 OS=Rattus norvegicus GN=Klhl17 PE=1 SV=1 Back     alignment and function description
>sp|Q6TDP3|KLH17_MOUSE Kelch-like protein 17 OS=Mus musculus GN=Klhl17 PE=2 SV=1 Back     alignment and function description
>sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1 Back     alignment and function description
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
255541774 549 atpob1, putative [Ricinus communis] gi|2 1.0 0.692 0.921 0.0
224064139 556 predicted protein [Populus trichocarpa] 1.0 0.683 0.918 0.0
224127832 547 predicted protein [Populus trichocarpa] 0.997 0.692 0.912 0.0
297745384 501 unnamed protein product [Vitis vinifera] 1.0 0.758 0.902 0.0
225454420 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.687 0.902 0.0
356573187 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.685 0.907 0.0
449432076 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.687 0.908 0.0
356506034 553 PREDICTED: BTB/POZ domain-containing pro 0.997 0.685 0.905 0.0
356560627 553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.687 0.907 0.0
307136357 552 ATPOB protein binding [Cucumis melo subs 0.994 0.684 0.905 0.0
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/380 (92%), Positives = 369/380 (97%)

Query: 1   MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYC 60
           M+ESEQRHV LRINASEEAALMELLNFMYSN+LST  AP LLDVLMAADKFEVASCMRYC
Sbjct: 170 MRESEQRHVTLRINASEEAALMELLNFMYSNSLSTNTAPGLLDVLMAADKFEVASCMRYC 229

Query: 61  SRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPL 120
           SR LRNM MTPESALLYLELPSSVLM EAVQPLTDAA+QYLASRY+DMTK+Q+EVM+LPL
Sbjct: 230 SRQLRNMSMTPESALLYLELPSSVLMAEAVQPLTDAAKQYLASRYRDMTKYQEEVMSLPL 289

Query: 121 AGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKL 180
           AG+EAILSSDDLQ+ASEDAVYDFVLKWAR QYP++EERREVLG+RLARFIRFP+MTCRKL
Sbjct: 290 AGIEAILSSDDLQVASEDAVYDFVLKWARTQYPKLEERREVLGARLARFIRFPYMTCRKL 349

Query: 181 KKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVV 240
           KKVLTC+DFDHDVASKLVLEALFFKAEAPHRQR+LAAEES +LNRRFVERAYKYRPVKVV
Sbjct: 350 KKVLTCSDFDHDVASKLVLEALFFKAEAPHRQRSLAAEESASLNRRFVERAYKYRPVKVV 409

Query: 241 EFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 300
           EFE PRQQCVVYLDLKREEC NLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL
Sbjct: 410 EFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 469

Query: 301 FLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAD 360
           FLGMQEKG+VSFAVDYEFAAR+KPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAD
Sbjct: 470 FLGMQEKGNVSFAVDYEFAARAKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAD 529

Query: 361 DSLYFINGILHLRAELTIRH 380
           DSLYFING+LHLRAELTIRH
Sbjct: 530 DSLYFINGVLHLRAELTIRH 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297745384|emb|CBI40464.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356560627|ref|XP_003548592.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|307136357|gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 0.997 0.675 0.870 7e-180
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 0.997 0.675 0.868 4e-177
ZFIN|ZDB-GENE-050904-1 623 kbtbd12 "kelch repeat and BTB 0.539 0.329 0.258 9.6e-07
UNIPROTKB|Q6TDP4 642 KLHL17 "Kelch-like protein 17" 0.502 0.297 0.271 1e-06
ZFIN|ZDB-GENE-041114-205 564 klhl12 "kelch-like 12 (Drosoph 0.560 0.377 0.262 1.1e-06
MGI|MGI:2678948 640 Klhl17 "kelch-like 17" [Mus mu 0.502 0.298 0.271 1.3e-06
RGD|708444 640 Klhl17 "kelch-like family memb 0.502 0.298 0.271 1.3e-06
ZFIN|ZDB-GENE-070410-63567 zgc:162298 "zgc:162298" [Danio 0.528 0.354 0.222 3.8e-06
MGI|MGI:2661430 599 Kbtbd8 "kelch repeat and BTB ( 0.447 0.283 0.260 5.4e-06
UNIPROTKB|O60662 606 KLHL41 "Kelch-like protein 41" 0.523 0.328 0.232 9.1e-06
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
 Identities = 330/379 (87%), Positives = 359/379 (94%)

Query:     1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYC 60
             M+ESEQRHV LRINASEEAALMELLNFMYSN +S T APALLDVLMAADKFEVASCMRYC
Sbjct:   178 MRESEQRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYC 237

Query:    61 SRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPL 120
             SRLLRNMPMTPESALLYLELPSSVLM +AVQPLTDAA+Q+LA+RYKD+TKF +EVM+LPL
Sbjct:   238 SRLLRNMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPL 297

Query:   121 AGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKL 180
             AG+EAILSSD+LQIASEDAVYDF+LKWARAQYP +EERRE+LGSRLA  IRFP MTCRKL
Sbjct:   298 AGIEAILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKL 357

Query:   181 KKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVV 240
             KKVLTC+DF+H++ASKLVLEALFFKAEAPHRQR+LA+EES +LNRR +ERAYKYRPVKVV
Sbjct:   358 KKVLTCSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVV 417

Query:   241 EFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 300
             EFE PR QCVVYLDLKREEC  LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL
Sbjct:   418 EFELPRPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGL 477

Query:   301 FLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAD 360
             FLGMQEKGSVSF VDYEF+ARSKP E+F+SKYKGNYTFTGGKAVGYRNLF +PWTSF+A+
Sbjct:   478 FLGMQEKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAE 537

Query:   361 DSLYFINGILHLRAELTIR 379
             DS YFINGILHLRAELTI+
Sbjct:   538 DSQYFINGILHLRAELTIK 556
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050904-1 kbtbd12 "kelch repeat and BTB (POZ) domain containing 12" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q6TDP4 KLHL17 "Kelch-like protein 17" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-205 klhl12 "kelch-like 12 (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2678948 Klhl17 "kelch-like 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708444 Klhl17 "kelch-like family member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-63 zgc:162298 "zgc:162298" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2661430 Kbtbd8 "kelch repeat and BTB (POZ) domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O60662 KLHL41 "Kelch-like protein 41" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FPW6POB1_ARATHNo assigned EC number0.87070.99730.6755yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
smart00875101 smart00875, BACK, BTB And C-terminal Kelch 5e-10
pfam07707101 pfam07707, BACK, BTB And C-terminal Kelch 9e-10
PHA03098 534 PHA03098, PHA03098, kelch-like protein; Provisiona 4e-05
cd13342147 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) relate 3e-04
>gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch Back     alignment and domain information 
 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 91  QPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARA 150
           + L + A +++   + +++   +E + LPL  +  +LSSDDL ++SE+ V++ VL+W + 
Sbjct: 14  EELAEKALRFILQNFSEVSS-SEEFLELPLEQLLELLSSDDLNVSSEEEVFEAVLRWVKH 72

Query: 151 QYPRVEERREVLGSRLARFIRFPHMT 176
                E+RRE L   L   +R P ++
Sbjct: 73  D---PEKRREHL-PELLEHVRLPLLS 94

The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues. Length = 101
>gnl|CDD|149006 pfam07707, BACK, BTB And C-terminal Kelch Back     alignment and domain information
>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional Back     alignment and domain information
>gnl|CDD|241496 cd13342, PH-GRAM_MTMR4, Myotubularian (MTM) related 4 protein (MTMR4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 380
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 99.82
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 99.79
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 99.71
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.64
KOG4682488 consensus Uncharacterized conserved protein, conta 99.5
KOG4591280 consensus Uncharacterized conserved protein, conta 99.15
PHA02713 557 hypothetical protein; Provisional 98.81
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 98.62
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 98.61
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 98.42
PHA02790480 Kelch-like protein; Provisional 98.27
PHA03098534 kelch-like protein; Provisional 98.26
KOG0783 1267 consensus Uncharacterized conserved protein, conta 97.89
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 97.5
PLN02153341 epithiospecifier protein 97.42
smart0061247 Kelch Kelch domain. 97.37
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 97.26
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 97.24
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 97.22
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 97.01
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 96.71
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 96.49
PLN02153341 epithiospecifier protein 96.39
PLN02193470 nitrile-specifier protein 96.35
KOG4693 392 consensus Uncharacterized conserved protein, conta 96.2
PF1396450 Kelch_6: Kelch motif 96.15
cd03772137 MATH_HAUSP Herpesvirus-associated ubiquitin-specif 96.11
cd03774139 MATH_SPOP Speckle-type POZ protein (SPOP) family, 96.02
PLN02193470 nitrile-specifier protein 95.73
PF1385442 Kelch_5: Kelch motif 95.53
PF1396450 Kelch_6: Kelch motif 95.35
PF1341549 Kelch_3: Galactose oxidase, central domain 95.28
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 95.19
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 94.87
cd00121126 MATH MATH (meprin and TRAF-C homology) domain; an 94.56
KOG2716230 consensus Polymerase delta-interacting protein PDI 94.4
cd03775134 MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p 94.15
PF00917119 MATH: MATH domain; InterPro: IPR002083 Although ap 93.89
KOG4693392 consensus Uncharacterized conserved protein, conta 93.88
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 93.73
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 93.6
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 93.44
cd03773132 MATH_TRIM37 Tripartite motif containing protein 37 93.41
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 92.87
KOG1665302 consensus AFH1-interacting protein FIP2, contains 92.64
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 92.22
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 91.86
PLN02772 398 guanylate kinase 91.81
KOG0511516 consensus Ankyrin repeat protein [General function 91.66
KOG3473112 consensus RNA polymerase II transcription elongati 90.54
KOG4350 620 consensus Uncharacterized conserved protein, conta 87.85
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 87.83
cd00270149 MATH_TRAF_C Tumor Necrosis Factor Receptor (TNFR)- 82.88
KOG1230 521 consensus Protein containing repeated kelch motifs 82.58
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 82.43
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 80.46
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-49  Score=407.85  Aligned_cols=339  Identities=21%  Similarity=0.339  Sum_probs=285.5

Q ss_pred             CCCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHHHHHh
Q 016908            1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLEL   80 (380)
Q Consensus         1 m~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~i~~~   80 (380)
                      |+|+.+++|+|+  ++++.+++.+++|+|||++.|+. +||++||.||++|||+.+++.|++||++ +|+++||++|..|
T Consensus        70 l~e~~~~~i~l~--~v~~~~l~~ll~y~Yt~~i~i~~-~nVq~ll~aA~~lQi~~v~~~C~~fL~~-~l~~~Nclgi~~~  145 (571)
T KOG4441|consen   70 LKESKQKEINLE--GVDPETLELLLDYAYTGKLEISE-DNVQELLEAASLLQIPEVVDACCEFLES-QLDPSNCLGIRRF  145 (571)
T ss_pred             cccccceEEEEe--cCCHHHHHHHHHHhhcceEEech-HhHHHHHHHHHHhhhHHHHHHHHHHHHh-cCCHHHHHHHHHH
Confidence            789999999999  99999999999999999999998 9999999999999999999999999999 9999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhccCCCcCCCChHHHHHHHHHHHHhhCCChHHHHH
Q 016908           81 PSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERRE  160 (380)
Q Consensus        81 a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~sd~L~v~~E~~v~~~v~~Wi~~d~~~~~~R~~  160 (380)
                      |+    .++|.+|.+.|..||..||.++.+ ++||+.||.++|..+|++|+|+|.+|+.||+++++|++||   .+.|+.
T Consensus       146 a~----~~~~~~L~~~a~~~i~~~F~~v~~-~eefl~L~~~~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~d---~~~R~~  217 (571)
T KOG4441|consen  146 AE----LHSCTELLEVADEYILQHFAEVSK-TEEFLLLSLEELIGLLSSDDLNVDSEEEVFEAAMRWVKHD---FEEREE  217 (571)
T ss_pred             HH----hcCcHHHHHHHHHHHHHHHHHHhc-cHHhhCCCHHHHHhhccccCCCcCCHHHHHHHHHHHHhcC---HhhHHH
Confidence            99    479999999999999999999999 9999999999999999999999999999999999999999   888999


Q ss_pred             HHHHHhcccccCCCCCHHHHHhhhccCCCC--hhHHHHHHHHHHHhhhcCCcccccccccccccCCC-CccceEEE-e--
Q 016908          161 VLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNR-RFVERAYK-Y--  234 (380)
Q Consensus       161 ~l~~~Ll~~VRf~~l~~~~L~~~~~~~~l~--~~~c~~~i~ea~~~~~~~~~~~~~l~~~~~~p~~R-~~~~~ly~-~--  234 (380)
                      ++ +.|+++||||+|++.+|.+.+...+++  ++.|++++.++++||..| ..++.++.++++|  | ...+.||+ +  
T Consensus       218 ~~-~~ll~~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~~~~~~~-~~~~~~~~~~t~~--r~~~~~~l~~vGG~  293 (571)
T KOG4441|consen  218 HL-PALLEAVRLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAKKYHLLP-QRRPVMQSPRTRP--RRSVSGKLVAVGGY  293 (571)
T ss_pred             HH-HHHHHhcCccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHHHHhhCc-ccCccccCCCccc--CcCCCCeEEEECCC
Confidence            99 999999999999999999999988876  478999999999999975 4566688999999  8 45588888 2  


Q ss_pred             ----cCCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC---ccccccc-------------ccCC
Q 016908          235 ----RPVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG---FFLSAHC-------------NMDQ  291 (380)
Q Consensus       235 ----~~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~---~~l~~~~-------------~~~~  291 (380)
                          ....+||+|||.++.|..   ||.+|.++++++++|+||    ++||++   ..+....             +|.+
T Consensus       294 ~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lY----v~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~  369 (571)
T KOG4441|consen  294 NRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLY----VVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNT  369 (571)
T ss_pred             CCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEE----EEccccCCCcccceEEEecCCCCceeccCCccC
Confidence                235799999999999999   899999999999999999    999976   2333333             5555


Q ss_pred             CCCceeeEEEEe-----eeccCcee-eEEe-eeeeecc----------ccccccccccceeEEeeCCc-------ccccc
Q 016908          292 QSSFHCFGLFLG-----MQEKGSVS-FAVD-YEFAARS----------KPTEEFVSKYKGNYTFTGGK-------AVGYR  347 (380)
Q Consensus       292 ~~~~~~~g~~~~-----~~~~~~~~-~~~~-~~~~~r~----------~~~~~~~~~~~~~~~~tg~~-------~~~~~  347 (380)
                      .+..+.-+.+-|     .+.+|... .+|| |++-...          +..-.-+......|.++|..       +++++
T Consensus       370 ~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~Y  449 (571)
T KOG4441|consen  370 KRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECY  449 (571)
T ss_pred             ccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEE
Confidence            433333322222     23555555 5677 7764333          22222333445566666421       56999


Q ss_pred             cCCCCCCceeee
Q 016908          348 NLFAIPWTSFMA  359 (380)
Q Consensus       348 ~~~~~~~~~~~~  359 (380)
                      ||.+-.|+..-.
T Consensus       450 DP~t~~W~~~~~  461 (571)
T KOG4441|consen  450 DPETNTWTLIAP  461 (571)
T ss_pred             cCCCCceeecCC
Confidence            999999987644

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>cd03772 MATH_HAUSP Herpesvirus-associated ubiquitin-specific protease (HAUSP, also known as USP7) family, N-terminal MATH (TRAF-like) domain; composed of proteins similar to human HAUSP, an enzyme that specifically catalyzes the deubiquitylation of p53 and MDM2, hence playing an important role in the p53-MDM2 pathway Back     alignment and domain information
>cd03774 MATH_SPOP Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>cd00121 MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03775 MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p) family, MATH domain; composed of fungal proteins with similarity to Ubp21p of fission yeast Back     alignment and domain information
>PF00917 MATH: MATH domain; InterPro: IPR002083 Although apparently functionally unrelated, intracellular TRAFs and extracellular meprins share a conserved region of about 180 residues, the meprin and TRAF homology (MATH) domain [] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>cd03773 MATH_TRIM37 Tripartite motif containing protein 37 (TRIM37) family, MATH domain; TRIM37 is a peroxisomal protein and is a member of the tripartite motif (TRIM) protein subfamily, also known as the RING-B-box-coiled-coil (RBCC) subfamily of zinc-finger proteins Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>cd00270 MATH_TRAF_C Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase signaling cascades which results in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses in the immune and inflammatory systems Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 2e-19
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 4e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 4e-05
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 5e-05
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 1e-04
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 3e-04
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 7e-04
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 21/210 (10%)

Query: 1   MKESEQRHVALRINASEE----AALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC 56
             ES    V +R  +SE       +  ++ +MY+  +  +      +VL  AD+F +   
Sbjct: 69  FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVH-EVLELADRFLLIRL 127

Query: 57  MRYCSRLLRNMPMTPESALLYLELPSSVLMGEA--VQPLTDAARQYLASRYKDMTKFQDE 114
             +C   L+   +   + +    L           +  L   A   +   +  + +  +E
Sbjct: 128 KEFCGEFLKKK-LHLSNCVAIHSL------AHMYTLSQLALKAADMIRRNFHKVIQ-DEE 179

Query: 115 VMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPH 174
              LP   +   LS  ++ + SE+ +++ VLKW +      EER       L + +R   
Sbjct: 180 FYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQ 235

Query: 175 MTCRKLKKVLTCNDF--DHDVASKLVLEAL 202
           M    L + +       +++V  KLV +A+
Sbjct: 236 MKPTYLTRHVKPERLVANNEVCVKLVADAV 265
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.83
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.7
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.6
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.43
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.16
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.12
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.1
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.07
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.06
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.05
2vpk_A116 Myoneurin; transcription regulation, transcription 99.04
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.04
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.03
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.01
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 98.92
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 98.88
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 98.84
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 98.78
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 98.72
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 98.47
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 98.27
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 98.2
4ajy_C97 Transcription elongation factor B polypeptide 1; E 97.76
3ii7_A 306 Kelch-like protein 7; protein-binding, kelch-repea 97.76
2zwa_A 695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 97.75
2vpj_A 301 Kelch-like protein 12; adaptor protein, WNT signal 97.63
2xn4_A 302 Kelch-like protein 2; structural protein, cytoskel 97.56
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 97.52
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 97.5
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 97.46
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 97.36
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 97.32
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 97.31
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 97.31
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 97.3
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 97.28
3ivv_A145 Speckle-type POZ protein; protein binding, nucleus 97.19
2uvk_A 357 YJHT; unknown function, hypothetical protein, sial 97.1
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 97.08
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 97.07
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 96.91
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 96.74
3hqi_A 312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 96.53
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 96.04
2foj_A155 Ubiquitin carboxyl-terminal hydrolase 7; MATH doma 95.9
2fnj_C96 Transcription elongation factor B polypeptide 1; b 95.83
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 95.39
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 95.28
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 95.26
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 95.23
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 94.31
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 94.26
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 93.96
2f1z_A 522 Ubiquitin carboxyl-terminal hydrolase 7; hausp, US 93.27
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 92.72
3kvt_A115 Potassium channel protein SHAW; tetramerization do 92.08
1ca9_A192 TRAF2, protein (TNF receptor associated factor 2); 91.91
4gjh_A178 TNF receptor-associated factor 5; TRAF domain, imm 91.88
1lb6_A160 TNF receptor-associated factor 6; TRAF6-CD40 compl 89.67
1d00_A168 Tumor necrosis factor receptor associated protein 88.75
1flk_A228 TNF receptor associated factor 3; TNF signaling, T 87.39
4ghu_A198 TNF receptor-associated factor 3; alpha/beta, inna 83.71
2gkw_A192 TNF receptor-associated factor 3; CD40, NF-KB sign 81.74
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=1.8e-36  Score=285.83  Aligned_cols=198  Identities=21%  Similarity=0.390  Sum_probs=181.2

Q ss_pred             CCCCCcceEEEec----CCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHH
Q 016908            1 MKESEQRHVALRI----NASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALL   76 (380)
Q Consensus         1 m~Es~~~~V~L~~----~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~   76 (380)
                      |+|+.+++|+|+.    +++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+ .++++||+.
T Consensus        69 ~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~  146 (279)
T 3i3n_A           69 FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVA  146 (279)
T ss_dssp             -------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHH
T ss_pred             CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHH
Confidence            5688888888862    278999999999999999999997 9999999999999999999999999999 899999999


Q ss_pred             HHHhccccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhccCCCcCCCChHHHHHHHHHHHHhhCCChH
Q 016908           77 YLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVE  156 (380)
Q Consensus        77 i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~sd~L~v~~E~~v~~~v~~Wi~~d~~~~~  156 (380)
                      ++.+|+.    +++.+|.+.|.+||.+||.++.+ +++|++||.+.+..+|++|+|+|.+|.+||+++++|++||   ++
T Consensus       147 i~~~A~~----~~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~  218 (279)
T 3i3n_A          147 IHSLAHM----YTLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AE  218 (279)
T ss_dssp             HHHHHHH----TTCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HH
T ss_pred             HHHHHHH----cCcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HH
Confidence            9999984    69999999999999999999999 9999999999999999999999999999999999999999   89


Q ss_pred             HHHHHHHHHhcccccCCCCCHHHHHhhhccCCCC--hhHHHHHHHHHHHhhhcCC
Q 016908          157 ERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HDVASKLVLEALFFKAEAP  209 (380)
Q Consensus       157 ~R~~~l~~~Ll~~VRf~~l~~~~L~~~~~~~~l~--~~~c~~~i~ea~~~~~~~~  209 (380)
                      +|.+++ ++||++||||+|++++|.+.+.+++++  ++.|++++.+|++||..|.
T Consensus       219 ~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~  272 (279)
T 3i3n_A          219 ERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRA  272 (279)
T ss_dssp             HHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCch
Confidence            999999 999999999999999999999988886  3789999999999999764
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A Back     alignment and structure
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus} Back     alignment and structure
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A Back     alignment and structure
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A Back     alignment and structure
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A Back     alignment and structure
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A Back     alignment and structure
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.19
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.09
d1zgka1 288 Kelch-like ECH-associated protein 1, KEAP1 {Human 97.56
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 97.12
d2cr2a1146 Speckle-type poz protein SPOP {Human (Homo sapiens 96.84
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 96.73
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 95.88
d3kvta_103 akv3.1 voltage-gated potassium channel {California 94.68
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 94.26
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 93.62
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 92.48
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 92.06
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 91.52
d1t1da_100 Shaker potassium channel {California sea hare (Apl 89.76
d1lb6a_155 TNF receptor associated factor 6 (TRAF6) {Human (H 88.19
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.1e-11  Score=99.67  Aligned_cols=61  Identities=25%  Similarity=0.426  Sum_probs=57.1

Q ss_pred             CCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908            3 ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN   66 (380)
Q Consensus         3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~   66 (380)
                      ++..++|+++  ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||++
T Consensus        59 ~~~~~~i~~~--~v~~~~f~~ll~~~Ytg~i~l~~-~~v~~ll~~A~~l~~~~L~~~C~~~L~~  119 (121)
T d1buoa_          59 HRNSQHYTLD--FLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET  119 (121)
T ss_dssp             TSCCSEEEEC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             cCccceeecC--CCCHHHHHHHHHheEccccCCcH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence            4566788888  99999999999999999999997 9999999999999999999999999976
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d2cr2a1 b.8.1.1 (A:8-153) Speckle-type poz protein SPOP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure