Citrus Sinensis ID: 016922

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
ccccccEEEcccccccccccccccHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHcccccccccEEEEEEEccccEEEccccccccccccccccccccccHHHHHHHccHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHcccccEEEEcccccccccEEEEEEcccccEEEEEEccccHHHHHHHcccccccccccccHHHHcccHHHHHHHHHHHHccccccccc
cccccEEEEcccccccccccccccHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHHcHccccHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccHHHHHHHHHcccccccHccEEEEEcccEccEccccEEEEcccccEEEccccccHHHHHHHHccHHHHHHHcccEEEEEEEcccEEEEEcccHEHHHHHHccccHHHHHHEcccccccEEEEEEEccccccEEEEEEcccHHHHHHcccccccEEEEHHHHHHHHHcHHHHHHHHHHHHHHHcccccc
mreptvvgtesnggsvgsiaqspppQALLERLKDYGQEDAFALWdelspderdhlvkdiesldlprvdrIIRCslrsqglpvaaiepvpersvstvEERTMDERERWWKMGLKAISDGKLAVLLLSggqgtrlgssdpkgcvniglpsgkSLFQLQAERILCVQRLAAQvtsegggsgsAAIHWYImtspftddatrkyfeghkyfglesdqvtffqqgtipcvskdgrfimetpykvakapdgnggvySALKSSKLLEDMATRGIKYidcygvdnalvrvadptflgyFIDKGVSAGAKVVrkaypqekvgvfvrrgkggpltvveyseldpsLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGlekdsvllpsc
mreptvvgtesnggsvgsiaqspPPQALLERLKDYGQEDAFALWDELSPDERDHLVkdiesldlprvDRIIRCSlrsqglpvaaiepvpersvstveertmDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYkvakapdgngGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVrkaypqekvgvfvrrgkggpLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEkdsvllpsc
MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEkvgvfvrrgkggPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
**********************************YGQEDAFALWDELSP*ERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAI*******************ERWWKMGLKAISDGKLAVLLLSGGQGTRL*****KGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGL**********
********************************KDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSV********DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLAS**N*ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
*********************SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPE***********DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAA*********GSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
**************SVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS*****AAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLLPSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query380 2.2.26 [Sep-21-2011]
O64765 502 Probable UDP-N-acetylgluc no no 0.984 0.745 0.766 1e-176
Q28CH3 511 UDP-N-acetylhexosamine py yes no 0.873 0.649 0.455 1e-76
Q91YN5 522 UDP-N-acetylhexosamine py yes no 0.878 0.639 0.452 5e-74
Q16222 522 UDP-N-acetylhexosamine py yes no 0.868 0.632 0.446 4e-71
Q7ZWD4 505 UDP-N-acetylhexosamine py no no 0.876 0.659 0.428 2e-69
O74933 486 UDP-N-acetylglucosamine p N/A no 0.884 0.691 0.390 1e-68
Q54GN5 487 Probable UDP-N-acetylgluc yes no 0.863 0.673 0.404 2e-67
Q3KQV9 507 UDP-N-acetylhexosamine py no no 0.889 0.666 0.427 1e-66
Q3TW96 507 UDP-N-acetylhexosamine py no no 0.739 0.554 0.463 3e-64
P43123 477 UDP-N-acetylglucosamine p yes no 0.836 0.666 0.397 4e-64
>sp|O64765|UAP1_ARATH Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1 Back     alignment and function desciption
 Score =  618 bits (1594), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 292/381 (76%), Positives = 332/381 (87%), Gaps = 7/381 (1%)

Query: 1   MREPTVVGTESNGGSVGSIAQ------SPPPQALLERLKDYGQEDAFALWDELSPDERDH 54
           M+EPT    E    +V +I        + P QAL+ERLKDYGQED F+LWDELSP+ERD 
Sbjct: 1   MKEPTT-EIEIETSAVATILPPPLPPTASPHQALVERLKDYGQEDVFSLWDELSPEERDL 59

Query: 55  LVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKA 114
           L++DIE+LDLPR+DRIIRCSL SQGLPVAAIEPVPE  VSTVEERT ++RE+WWKMGLKA
Sbjct: 60  LLRDIENLDLPRIDRIIRCSLHSQGLPVAAIEPVPENCVSTVEERTKEDREKWWKMGLKA 119

Query: 115 ISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEG 174
           I +GKL V+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQ+QAERILCVQRLA+Q  SE 
Sbjct: 120 IYEGKLGVVLLSGGQGTRLGSSDPKGCYNIGLPSGKSLFQIQAERILCVQRLASQAMSEA 179

Query: 175 GGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET 234
             +    I WYIMTSPFT + T+K+F+ HKYFGLE DQVTFFQQGT+PC+SKDG+FIMET
Sbjct: 180 SPTRPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFFQQGTLPCISKDGKFIMET 239

Query: 235 PYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKG 294
           P+ ++KAPDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDN LVRVADPTFLGYFIDK 
Sbjct: 240 PFSLSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKS 299

Query: 295 VSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354
            ++ AKVVRKAYPQEKVGVFVRRGKGGPLTVVEY+ELD S+ASA NQ+TGRL++CWSNVC
Sbjct: 300 AASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYTELDQSMASATNQQTGRLQYCWSNVC 359

Query: 355 LHMFTLDFLNQVANGLEKDSV 375
           LHMFTLDFLNQVANGLEKDSV
Sbjct: 360 LHMFTLDFLNQVANGLEKDSV 380

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 2EC: 3
>sp|Q28CH3|UAP1L_XENTR UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus tropicalis GN=uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|Q91YN5|UAP1_MOUSE UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus GN=Uap1 PE=1 SV=1 Back     alignment and function description
>sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3 Back     alignment and function description
>sp|Q7ZWD4|UAP1L_DANRE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio GN=uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|O74933|UAP1_CANAX UDP-N-acetylglucosamine pyrophosphorylase OS=Candida albicans GN=UAP1 PE=1 SV=1 Back     alignment and function description
>sp|Q54GN5|UAP1_DICDI Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium discoideum GN=uap1 PE=3 SV=1 Back     alignment and function description
>sp|Q3KQV9|UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=1 SV=2 Back     alignment and function description
>sp|Q3TW96|UAP1L_MOUSE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus GN=Uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|P43123|UAP1_YEAST UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QRI1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
217074416 492 unknown [Medicago truncatula] gi|3884973 0.973 0.752 0.842 0.0
225423637 485 PREDICTED: probable UDP-N-acetylglucosam 0.928 0.727 0.892 0.0
356512205 490 PREDICTED: probable UDP-N-acetylglucosam 0.968 0.751 0.861 0.0
356524976 490 PREDICTED: probable UDP-N-acetylglucosam 0.968 0.751 0.853 1e-180
449433495 503 PREDICTED: probable UDP-N-acetylglucosam 0.907 0.685 0.878 1e-179
297823295 498 UTP--glucose-1-phosphate uridylyltransfe 0.986 0.753 0.784 1e-177
9755397 498 F17F8.1 [Arabidopsis thaliana] 0.928 0.708 0.816 1e-175
30692244 505 N-acetylglucosamine-1-phosphate uridylyl 0.928 0.699 0.816 1e-175
295126562 505 UTP:N-acetylglucosamine-1-P uridylyltran 0.928 0.699 0.816 1e-175
15226877 502 putative UDP-N-acetylglucosamine pyropho 0.984 0.745 0.766 1e-174
>gi|217074416|gb|ACJ85568.1| unknown [Medicago truncatula] gi|388497374|gb|AFK36753.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/375 (84%), Positives = 344/375 (91%), Gaps = 5/375 (1%)

Query: 1   MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
           MREP+    E+NGG V     SPPPQALLERLKDYGQED F+LWDELS +ERD LVKDIE
Sbjct: 1   MREPSTAIIETNGGGV----SSPPPQALLERLKDYGQEDVFSLWDELSNEERDFLVKDIE 56

Query: 61  SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
           SLDL R+DRIIRCSLRSQGLP AAIEPVPE +VS VEER+ +ERERWWKMGLKAISDGK+
Sbjct: 57  SLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSKVEERSQEERERWWKMGLKAISDGKV 116

Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
           AVLLLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAA  T+E   S S 
Sbjct: 117 AVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAHATNESSAS-SV 175

Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
            IHWYIMTSPFTD+ATRK+FE HKYFGL+++QVTFF+QGTIPCVSKDGR I+ETPY+VAK
Sbjct: 176 QIHWYIMTSPFTDEATRKFFESHKYFGLDAEQVTFFRQGTIPCVSKDGRIILETPYRVAK 235

Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
           APDGNGGVYSALKS+KLLEDMA++GIKY+DCYGVDNALVRVADP+F+GYFIDKGV+A AK
Sbjct: 236 APDGNGGVYSALKSTKLLEDMASKGIKYVDCYGVDNALVRVADPSFIGYFIDKGVTAAAK 295

Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTL 360
           VVRKAYPQEKVGVFV+RGKGGPLTVVEYSELDPSLASA+NQ TGRLRFCWSNVCLHMFTL
Sbjct: 296 VVRKAYPQEKVGVFVQRGKGGPLTVVEYSELDPSLASAVNQTTGRLRFCWSNVCLHMFTL 355

Query: 361 DFLNQVANGLEKDSV 375
           DFLNQVANGLEKDS+
Sbjct: 356 DFLNQVANGLEKDSI 370

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225423637|ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase [Vitis vinifera] gi|297738002|emb|CBI27203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356512205|ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|356524976|ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|449433495|ref|XP_004134533.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] gi|449490659|ref|XP_004158669.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297823295|ref|XP_002879530.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325369|gb|EFH55789.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|9755397|gb|AAF98204.1|AC000107_27 F17F8.1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30692244|ref|NP_564372.3| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|15450739|gb|AAK96641.1| At1g31070/F17F8_1 [Arabidopsis thaliana] gi|332193190|gb|AEE31311.1| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|295126562|gb|ADF80194.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-1 [synthetic construct] Back     alignment and taxonomy information
>gi|15226877|ref|NP_181047.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|6136087|sp|O64765.1|UAP1_ARATH RecName: Full=Probable UDP-N-acetylglucosamine pyrophosphorylase gi|18087511|gb|AAL58890.1|AF462794_1 At2g35020/F19I3.25 [Arabidopsis thaliana] gi|3033397|gb|AAC12841.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|56382033|gb|AAV85735.1| At2g35020 [Arabidopsis thaliana] gi|295126564|gb|ADF80195.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-2 [Arabidopsis thaliana] gi|330253956|gb|AEC09050.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
TAIR|locus:2015791 505 GlcNAc1pUT1 "N-acetylglucosami 0.928 0.699 0.793 2.8e-153
TAIR|locus:2044787 502 GlcNAc1pUT2 "N-acetylglucosami 0.984 0.745 0.740 8.5e-152
UNIPROTKB|G4MYL3 504 MGG_15671 "Uncharacterized pro 0.913 0.688 0.413 1.5e-67
ZFIN|ZDB-GENE-030131-1233 504 uap1 "UDP-N-acteylglucosamine 0.865 0.652 0.440 5.1e-67
FB|FBgn0259749 536 mmy "mummy" [Drosophila melano 0.889 0.630 0.400 1.2e-65
ASPGD|ASPL0000037237 505 ungA [Emericella nidulans (tax 0.886 0.667 0.406 3.2e-65
MGI|MGI:1334459 522 Uap1 "UDP-N-acetylglucosamine 0.878 0.639 0.444 4.1e-65
RGD|1561967 505 Uap1 "UDP-N-acteylglucosamine 0.878 0.661 0.438 4.7e-64
UNIPROTKB|F1P7W7 522 UAP1 "Uncharacterized protein" 0.863 0.628 0.443 7.6e-64
UNIPROTKB|F1S210 521 UAP1 "Uncharacterized protein" 0.863 0.629 0.446 7.6e-64
TAIR|locus:2015791 GlcNAc1pUT1 "N-acetylglucosamine-1-phosphate uridylyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1495 (531.3 bits), Expect = 2.8e-153, P = 2.8e-153
 Identities = 281/354 (79%), Positives = 311/354 (87%)

Query:    22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLP 81
             S P QAL+ERLKDYGQED F+LWDELSPDE+D LV+DIE+LDLPR+DRIIRCSL SQGLP
Sbjct:    31 SSPRQALVERLKDYGQEDIFSLWDELSPDEKDFLVRDIENLDLPRIDRIIRCSLHSQGLP 90

Query:    82 VAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGC 141
             VAAIEPVPE  VSTV+ RTM++RE+WWKMGLK I +GKL V+LLSGGQGTRLGSSDPKGC
Sbjct:    91 VAAIEPVPENWVSTVDGRTMEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGC 150

Query:   142 VNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE 201
              NIGLPSGKSLFQ+QAERILCVQRLAAQV SEG       IHWYIMTSPFTD+ATRKYF 
Sbjct:   151 FNIGLPSGKSLFQIQAERILCVQRLAAQVVSEGP-IRPVTIHWYIMTSPFTDEATRKYFS 209

Query:   202 GHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM 261
              HKYFGLE DQ++FFQQGT+PCV+KDG+FIMETP+ +AKAPDGNGGVY+ALK S+LLEDM
Sbjct:   210 SHKYFGLEPDQISFFQQGTLPCVTKDGKFIMETPFSLAKAPDGNGGVYAALKCSRLLEDM 269

Query:   262 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXX 321
             A+RGIKY+DCYGVDN LVRVADPTFLGYFIDKG ++ AKVVRKAYPQE            
Sbjct:   270 ASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKGAASAAKVVRKAYPQEQVGVFVRRGKGG 329

Query:   322 PLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSV 375
             PLTVVEYSELD S+ASAINQ TGRL++CWSNVCLHMFTLDFLNQVA GLEKDSV
Sbjct:   330 PLTVVEYSELDQSMASAINQRTGRLQYCWSNVCLHMFTLDFLNQVATGLEKDSV 383
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0003977 "UDP-N-acetylglucosamine diphosphorylase activity" evidence=IDA
GO:0006047 "UDP-N-acetylglucosamine metabolic process" evidence=IDA
GO:0019276 "UDP-N-acetylgalactosamine metabolic process" evidence=IDA
GO:0052630 "UDP-N-acetylgalactosamine diphosphorylase activity" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2044787 GlcNAc1pUT2 "N-acetylglucosamine-1-phosphate uridylyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-1233 uap1 "UDP-N-acteylglucosamine pyrophosphorylase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0259749 mmy "mummy" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
MGI|MGI:1334459 Uap1 "UDP-N-acetylglucosamine pyrophosphorylase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1561967 Uap1 "UDP-N-acteylglucosamine pyrophosphorylase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7W7 UAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S210 UAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
PLN02435 493 PLN02435, PLN02435, probable UDP-N-acetylglucosami 0.0
cd04193323 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl 1e-146
PTZ00339 482 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph 4e-77
COG4284 472 COG4284, COG4284, UDP-glucose pyrophosphorylase [C 7e-68
cd04180266 cd04180, UGPase_euk_like, Eukaryotic UGPase-like i 1e-58
pfam01704 417 pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly 1e-35
PLN02830 615 PLN02830, PLN02830, UDP-sugar pyrophosphorylase 6e-33
cd06424315 cd06424, UGGPase, UGGPase catalyzes the synthesis 2e-25
cd00897300 cd00897, UGPase_euk, Eukaryotic UGPase catalyses t 2e-11
PLN02474 469 PLN02474, PLN02474, UTP--glucose-1-phosphate uridy 5e-04
>gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information 
 Score =  738 bits (1908), Expect = 0.0
 Identities = 317/375 (84%), Positives = 346/375 (92%), Gaps = 4/375 (1%)

Query: 1   MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
           M+EP V   E+   +      + PPQALLERLKDYGQEDAFALWDELSP+ERD LV+DIE
Sbjct: 1   MKEPVV---ENEAVTAPGPWGAAPPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIE 57

Query: 61  SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
           SLDLPR+DRIIRCSLRSQGLPV AIEPVPE SVSTVEERT ++RERWWKMGLKAIS+GKL
Sbjct: 58  SLDLPRIDRIIRCSLRSQGLPVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKL 117

Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
           AV+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAAQ +SEG G    
Sbjct: 118 AVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAQASSEGPG-RPV 176

Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
            IHWYIMTSPFTD+ATRK+FE HKYFGLE+DQVTFFQQGT+PCVSKDG+FIMETP+KVAK
Sbjct: 177 TIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK 236

Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
           APDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDNALVRVADPTFLGYFIDKGV++ AK
Sbjct: 237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAK 296

Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTL 360
           VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELD ++ASAINQ+TGRLR+CWSNVCLHMFTL
Sbjct: 297 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAINQQTGRLRYCWSNVCLHMFTL 356

Query: 361 DFLNQVANGLEKDSV 375
           DFLNQVANGLEKDS+
Sbjct: 357 DFLNQVANGLEKDSI 371

Length = 493
>gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase Back     alignment and domain information
>gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>gnl|CDD|132998 cd00897, UGPase_euk, Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>gnl|CDD|178092 PLN02474, PLN02474, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 380
PLN02435 493 probable UDP-N-acetylglucosamine pyrophosphorylase 100.0
PTZ00339 482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 100.0
KOG2388 477 consensus UDP-N-acetylglucosamine pyrophosphorylas 100.0
PLN02830 615 UDP-sugar pyrophosphorylase 100.0
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 100.0
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 100.0
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 100.0
PF01704 420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 100.0
PLN02474 469 UTP--glucose-1-phosphate uridylyltransferase 100.0
COG4284 472 UDP-glucose pyrophosphorylase [Carbohydrate transp 100.0
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 100.0
KOG2638 498 consensus UDP-glucose pyrophosphorylase [Carbohydr 100.0
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 99.37
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 99.33
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 99.31
COG1208 358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 99.3
TIGR02092 369 glgD glucose-1-phosphate adenylyltransferase, GlgD 99.26
PRK05293 380 glgC glucose-1-phosphate adenylyltransferase; Prov 99.26
PRK00844 407 glgC glucose-1-phosphate adenylyltransferase; Prov 99.21
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 99.2
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 99.2
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 99.19
PRK10122297 GalU regulator GalF; Provisional 99.17
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 99.16
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 99.14
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 99.13
KOG1322 371 consensus GDP-mannose pyrophosphorylase/mannose-1- 99.1
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 99.08
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 99.08
PRK00725 425 glgC glucose-1-phosphate adenylyltransferase; Prov 99.08
PLN02241 436 glucose-1-phosphate adenylyltransferase 99.07
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 99.06
cd04181217 NTP_transferase NTP_transferases catalyze the tran 99.05
PRK02862 429 glgC glucose-1-phosphate adenylyltransferase; Prov 99.05
PRK14356 456 glmU bifunctional N-acetylglucosamine-1-phosphate 99.03
COG1207 460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 99.0
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 98.99
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 98.99
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 98.98
PRK14359 430 glmU bifunctional N-acetylglucosamine-1-phosphate 98.98
PRK14358 481 glmU bifunctional N-acetylglucosamine-1-phosphate 98.98
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 98.97
PRK14352 482 glmU bifunctional N-acetylglucosamine-1-phosphate 98.96
TIGR01208 353 rmlA_long glucose-1-phosphate thymidylylransferase 98.95
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 98.94
PRK14355 459 glmU bifunctional N-acetylglucosamine-1-phosphate 98.93
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 98.91
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 98.89
PRK14353 446 glmU bifunctional N-acetylglucosamine-1-phosphate 98.86
PRK14360 450 glmU bifunctional N-acetylglucosamine-1-phosphate 98.86
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 98.85
PRK14357 448 glmU bifunctional N-acetylglucosamine-1-phosphate 98.82
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 98.81
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 98.81
TIGR02091 361 glgC glucose-1-phosphate adenylyltransferase. This 98.8
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 98.75
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 98.73
TIGR01173 451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 98.71
PRK14354 458 glmU bifunctional N-acetylglucosamine-1-phosphate 98.7
TIGR01479 468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 98.69
PRK09451 456 glmU bifunctional N-acetylglucosamine-1-phosphate 98.65
KOG1460 407 consensus GDP-mannose pyrophosphorylase [Carbohydr 98.57
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 98.52
COG0448 393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 98.42
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 98.37
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 98.36
PRK13368238 3-deoxy-manno-octulosonate cytidylyltransferase; P 98.33
PLN02917293 CMP-KDO synthetase 98.23
cd02516218 CDP-ME_synthetase CDP-ME synthetase is involved in 98.21
PF12804160 NTP_transf_3: MobA-like NTP transferase domain; PD 98.18
COG1213239 Predicted sugar nucleotidyltransferases [Cell enve 98.14
TIGR00453217 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 98.13
cd04182186 GT_2_like_f GT_2_like_f is a subfamily of the glyc 98.12
PRK13385230 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 98.08
cd02513223 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- 98.07
COG0746192 MobA Molybdopterin-guanine dinucleotide biosynthes 98.02
TIGR00466238 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe 97.91
TIGR03310188 matur_ygfJ molybdenum hydroxylase accessory protei 97.82
TIGR00454183 conserved hypothetical protein TIGR00454. At this 97.81
PRK15460 478 cpsB mannose-1-phosphate guanyltransferase; Provis 97.77
cd02503181 MobA MobA catalyzes the formation of molybdopterin 97.72
PRK09382 378 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp 97.7
PF01128221 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly 97.66
COG0836 333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 97.66
PRK14489 366 putative bifunctional molybdopterin-guanine dinucl 97.59
TIGR02665186 molyb_mobA molybdopterin-guanine dinucleotide bios 97.55
TIGR03202190 pucB xanthine dehydrogenase accessory protein pucB 97.54
PLN02728252 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 97.51
PRK00155227 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 97.47
PRK00560196 molybdopterin-guanine dinucleotide biosynthesis pr 97.19
cd02518233 GT2_SpsF SpsF is a glycosyltrnasferase implicated 97.08
COG2266177 GTP:adenosylcobinamide-phosphate guanylyltransfera 97.03
PRK02726200 molybdopterin-guanine dinucleotide biosynthesis pr 96.94
PRK00317193 mobA molybdopterin-guanine dinucleotide biosynthes 96.93
COG1210291 GalU UDP-glucose pyrophosphorylase [Cell envelope 96.9
COG1211230 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt 96.82
PRK14500346 putative bifunctional molybdopterin-guanine dinucl 96.75
PRK14490369 putative bifunctional molybdopterin-guanine dinucl 96.66
COG4750231 LicC CTP:phosphocholine cytidylyltransferase invol 96.43
TIGR03584222 PseF pseudaminic acid CMP-transferase. The sequenc 95.49
COG2068199 Uncharacterized MobA-related protein [General func 92.16
PF14134 513 DUF4301: Domain of unknown function (DUF4301) 90.74
COG1212247 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase 83.38
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information 
Probab=100.00  E-value=9.2e-95  Score=738.84  Aligned_cols=373  Identities=85%  Similarity=1.354  Sum_probs=341.0

Q ss_pred             CCCCceeeeccCCCCCCCCCCCCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC
Q 016922            1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGL   80 (380)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~L~~ql~~id~~~~~~~~~~~~~~~~~   80 (380)
                      |.||.|-...  +..-++|.. .+.++++++|.++||+|||++|++|+++||++|++||.++|++++.+++++++.+.+.
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~-~~~~~l~~~l~~~gQ~HLl~~w~~ls~~e~~~L~~qL~~iD~~~l~~~~~~~~~~~~~   77 (493)
T PLN02435          1 MKEPVVENEA--VTAPGPWGA-APPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIESLDLPRIDRIIRCSLRSQGL   77 (493)
T ss_pred             CCcccccccc--CCCCCCCCc-ccHHHHHHHHHHcChHHHHHhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCC
Confidence            7888664332  333467765 4566899999999999999999999999999999999999999999999888765555


Q ss_pred             CCCccccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCccHHHHHHHH
Q 016922           81 PVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI  160 (380)
Q Consensus        81 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~PKg~~~i~l~s~ksllq~~~e~i  160 (380)
                      +++.++|+|++.+.++++.+.++.++|+++|+++|++||||+|+||||||||||+++||||+||++|++|||||++++||
T Consensus        78 ~~~~i~P~p~~~~~~~~~~~~~~~~~~~~~Gl~~I~~gkvavvlLAGGqGTRLG~~~PKg~~~Iglps~kslfql~~e~I  157 (493)
T PLN02435         78 PVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERI  157 (493)
T ss_pred             chhccCCCChhhccchhccChHHHHHHHHHHHHHHhcCCEEEEEeCCCcccccCCCCCccceecCCCCCCcHHHHHHHHH
Confidence            77889999988888887776677788999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCCceeEEEEcCCCchHHHHHHHhhcCCCCCCCCceEEEEeCCeeeEecCCcccccCCCcccc
Q 016922          161 LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK  240 (380)
Q Consensus       161 ~~l~~la~~~~~~~~~~~~~~ip~~IMTS~~t~e~t~~~f~~~~~FGl~~~~V~~f~Q~~~P~~~~~gki~l~~~~~i~~  240 (380)
                      +++|++|.++.+. ++++++.||||||||+.||++|++||++|+|||+++++|+||+|+++||++.+|+++|++++++++
T Consensus       158 ~~lq~la~~~~~~-~~~~~~~IPl~IMTS~~T~~~T~~ff~~~~~FGl~~~~V~fF~Q~~~P~~~~dg~i~l~~~~~i~~  236 (493)
T PLN02435        158 LCVQRLAAQASSE-GPGRPVTIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK  236 (493)
T ss_pred             HHHHHHHHhhccc-ccCCCCceeEEEeCCcchhHHHHHHHHhCCCCCCCccceEEEecCCcceECCCCCcccCCCccccc
Confidence            9999999775532 112578899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCchhhHHHhhCChHHHHHHCCCeEEEEEcCCCcccccCCHHHHHHHHHhCCceEEEEeecCCCCcccceEEEEcCC
Q 016922          241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKG  320 (380)
Q Consensus       241 ~P~GnGgi~~aL~~~g~l~~l~~~Gi~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~d~~~kvv~k~~p~e~vGvl~~~~~~  320 (380)
                      +|+||||+|.||+++|++++|.++|++|+||+||||+|++++||.|||||+.+++||++||++|++|+|+||+||+.+.+
T Consensus       237 ~P~GnGgiy~aL~~sG~Ld~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~d~~~kVv~K~~~~EkvG~i~~~~~~  316 (493)
T PLN02435        237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKG  316 (493)
T ss_pred             CCCCCcHHHHHHHHCCcHHHHHhcCCEEEEEEecccccccccCHHHHHHHHhcCCceEEEeeecCCCCCceeEEEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997568


Q ss_pred             CCeEEEEecccChhhhhhhccCCCcceeccccccchhccHHHHHHHHhccccCCCCC
Q 016922          321 GPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLL  377 (380)
Q Consensus       321 g~~~vvEYsel~~~~~~~~~~~~g~l~f~~gNi~~~~f~l~fL~~~~~~~~~~~~~~  377 (380)
                      |+++||||+||++++++.+++++|.+.|++||||||+||++||+++++.++..++||
T Consensus       317 g~~~vvEYsEl~~~~~~~~~~~~g~L~~~~gnI~~h~fs~~fL~~~~~~~~~~l~~H  373 (493)
T PLN02435        317 GPLTVVEYSELDQAMASAINQQTGRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYH  373 (493)
T ss_pred             CCEEEEEeccCCHHHHhccCccccccccchhhHHHhhccHHHHHHHHHhhhhcCCce
Confidence            999999999999999887776679999999999999999999999998887777775

>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PLN02917 CMP-KDO synthetase Back     alignment and domain information
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B Back     alignment and domain information
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety Back     alignment and domain information
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] Back     alignment and domain information
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase Back     alignment and domain information
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>TIGR00454 conserved hypothetical protein TIGR00454 Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional Back     alignment and domain information
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial Back     alignment and domain information
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB Back     alignment and domain information
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat Back     alignment and domain information
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional Back     alignment and domain information
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional Back     alignment and domain information
>COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03584 PseF pseudaminic acid CMP-transferase Back     alignment and domain information
>COG2068 Uncharacterized MobA-related protein [General function prediction only] Back     alignment and domain information
>PF14134 DUF4301: Domain of unknown function (DUF4301) Back     alignment and domain information
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
1vm8_A 534 Crystal Structure Of Udp-N-Acetylglucosamine Pyroph 1e-69
1jvd_A 522 Crystal Structure Of Human Agx2 Complexed With Udpg 1e-68
1jv1_A 505 Crystal Structure Of Human Agx1 Complexed With Udpg 1e-68
2yqc_A 486 Crystal Structure Of Uridine-Diphospho-N-Acetylgluc 6e-67
3oc9_A 405 Crystal Structure Of Putative Udp-N-Acetylglucosami 4e-40
3r2w_A 528 Crystal Strucutre Of Udp-Glucose Pyrophosphorylase 6e-05
2i5k_A 488 Crystal Structure Of Ugp1p Length = 488 9e-05
3gue_A 484 Crystal Structure Of Udp-Glucose Phosphorylase From 3e-04
>pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 Back     alignment and structure 
Iteration: 1

 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 201/351 (57%), Gaps = 17/351 (4%)
Query: 28  LLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSL------RSQGLP 81
           L +RL   GQE     W+ELS  ++  L  ++++ +   ++   R ++        Q   
Sbjct: 18  LKQRLSQAGQEHLLQFWNELSEAQQXELYXELQAXNFEELNSFFRKAIGEFDRSSHQEKV 77
Query: 82  VAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGC 141
            A  EPVP R V     R  ++ + W   GL  IS  K+AVLLL+GGQGTRLG S PKG 
Sbjct: 78  DARXEPVP-RQVLGSATRDQEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKGX 136
Query: 142 VNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE 201
            ++GLPS K+LFQ+QAERIL +Q+LA     E        I WYI TS  T ++T+++F 
Sbjct: 137 YDVGLPSHKTLFQIQAERILKLQQLA-----EKHHGNKCTIPWYIXTSGRTXESTKEFFT 191
Query: 202 GHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM 261
            HK+FGL+ + V FFQQG +P  S DG+ I+E   KV+ APDGNGG+Y AL +  ++ED 
Sbjct: 192 KHKFFGLKKENVVFFQQGXLPAXSFDGKIILEEKNKVSXAPDGNGGLYRALAAQNIVEDX 251
Query: 262 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXX 321
             RGI  I  Y VDN LV+VADP F+G+ I KG   GAKVV K  P E            
Sbjct: 252 EQRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGV- 310
Query: 322 PLTVVEYSELDPSLASAINQET-GRLRFCWSNVCLHMFTLDFLNQVANGLE 371
              VVEYSE+  SLA+A  + + GRL F   N+  H FT+ FL  V N  E
Sbjct: 311 -YQVVEYSEI--SLATAQRRSSDGRLLFNAGNIANHFFTVPFLKDVVNVYE 358
>pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 Back     alignment and structure
>pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 Back     alignment and structure
>pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 Back     alignment and structure
>pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 Back     alignment and structure
>pdb|3R2W|A Chain A, Crystal Strucutre Of Udp-Glucose Pyrophosphorylase Of Homo Sapiens Length = 528 Back     alignment and structure
>pdb|2I5K|A Chain A, Crystal Structure Of Ugp1p Length = 488 Back     alignment and structure
>pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
2yqc_A 486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 1e-117
1jv1_A 505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 1e-115
3oc9_A 405 UDP-N-acetylglucosamine pyrophosphorylase; structu 2e-94
3r3i_A 528 UTP--glucose-1-phosphate uridylyltransferase; ross 6e-84
3gue_A 484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 1e-79
2i5k_A 488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 1e-78
3ogz_A 630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 3e-75
2icy_A 469 Probable UTP-glucose-1-phosphate uridylyltransfera 3e-72
2oeg_A 505 UTP-glucose-1-phosphate uridylyltransferase 2, put 2e-70
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 Back     alignment and structure
 Score =  348 bits (894), Expect = e-117
 Identities = 138/363 (38%), Positives = 212/363 (58%), Gaps = 12/363 (3%)

Query: 23  PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLP-----RVDRIIRCSLRS 77
              Q +++  K   Q+  F  +D L+ D++   +  + +++ P      V++ I+ S  +
Sbjct: 4   KSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTN 63

Query: 78  QGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSD 137
                     +P    ++  + + D  + W ++GLKAI +G++AVLL++GGQGTRLGSS 
Sbjct: 64  S--TSRNFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSA 121

Query: 138 PKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197
           PKGC NI LPS KSLFQ+QAE+IL +++LA Q            I+WYIMTS  T +AT 
Sbjct: 122 PKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPI---INWYIMTSGPTRNATE 178

Query: 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSK 256
            +F  + YFGL S QV FF QGT+PC +  G + ++E    + ++PDGNGG+Y ALK + 
Sbjct: 179 SFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNG 238

Query: 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVR 316
           +L+D+ ++GIK+I  Y VDN LV+VADP F+G+ I K      KVVRK    E VG+ V 
Sbjct: 239 ILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVL 298

Query: 317 RGKGGPLTVVEYSELDPSLASAIN-QETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSV 375
                   V+EYSE+   LA+  + Q++ +L    +N+  H ++++FLN++         
Sbjct: 299 DQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQK 358

Query: 376 LLP 378
            LP
Sbjct: 359 YLP 361
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
2yqc_A 486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 100.0
1jv1_A 505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 100.0
3ogz_A 630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 100.0
3r3i_A 528 UTP--glucose-1-phosphate uridylyltransferase; ross 100.0
3oc9_A 405 UDP-N-acetylglucosamine pyrophosphorylase; structu 100.0
3gue_A 484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 100.0
2oeg_A 505 UTP-glucose-1-phosphate uridylyltransferase 2, put 100.0
2icy_A 469 Probable UTP-glucose-1-phosphate uridylyltransfera 100.0
2i5k_A 488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 100.0
3st8_A 501 Bifunctional protein GLMU; acetyltransferase, pyro 99.47
3oam_A252 3-deoxy-manno-octulosonate cytidylyltransferase; c 99.24
4ecm_A269 Glucose-1-phosphate thymidylyltransferase; HET: DA 99.2
1fxo_A293 Glucose-1-phosphate thymidylyltransferase; rhamnos 99.13
1mc3_A296 Glucose-1-phosphate thymidylyltransferase; glucose 99.1
1lvw_A295 Glucose-1-phosphate thymidylyltransferase; protein 99.08
3brk_X 420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 99.01
3juk_A281 UDP-glucose pyrophosphorylase (GALU); transfer; HE 99.01
3k8d_A264 3-deoxy-manno-octulosonate cytidylyltransferase; K 98.97
3tqd_A256 3-deoxy-manno-octulosonate cytidylyltransferase; c 98.96
3pnn_A303 Conserved domain protein; structural genomics, PSI 98.95
2qh5_A308 PMI, ALGA, mannose-6-phosphate isomerase; structur 98.9
1yp2_A 451 Glucose-1-phosphate adenylyltransferase small subu 98.89
1hm9_A 468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 98.82
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 98.82
1tzf_A259 Glucose-1-phosphate cytidylyltransferase; nucleoti 98.8
4fce_A 459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 98.8
2v0h_A 456 Bifunctional protein GLMU; cell WALL, magnesium, c 98.75
2e3d_A302 UTP--glucose-1-phosphate uridylyltransferase; UDP- 98.72
2x65_A 336 Mannose-1-phosphate guanylyltransferase; nucleotid 98.69
2ux8_A297 Glucose-1-phosphate uridylyltransferase; UGPG, GAL 98.68
2pa4_A323 UTP-glucose-1-phosphate uridylyltransferase; phosp 98.66
1h7e_A245 3-deoxy-manno-octulosonate cytidylyltransferase; n 98.65
4fcu_A253 3-deoxy-manno-octulosonate cytidylyltransferase; s 98.63
2y6p_A234 3-deoxy-manno-octulosonate cytidylyltransferase; l 98.62
2cu2_A 337 Putative mannose-1-phosphate guanylyl transferase; 98.53
1vic_A262 3-deoxy-manno-octulosonate cytidylyltransferase; s 98.51
3f1c_A246 Putative 2-C-methyl-D-erythritol 4-phosphate cytid 98.37
1ezi_A228 CMP-N-acetylneuraminic acid synthetase; homodimer, 98.36
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 98.35
2xwl_A223 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 98.34
2ggo_A 401 401AA long hypothetical glucose-1-phosphate thymid 98.32
1qwj_A229 Cytidine monophospho-N-acetylneuraminic acid synth 98.27
3q80_A231 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; 98.27
1vgw_A231 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; 98.2
2waw_A199 MOBA relate protein; unknown function; HET: PGE; 1 98.19
2vsh_A236 TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly 98.19
2wee_A197 MOBA-related protein; unknown function; 1.65A {Myc 98.18
1vpa_A234 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 98.11
3ngw_A208 Molybdopterin-guanine dinucleotide biosynthesis P 98.07
3d5n_A197 Q97W15_sulso; NESG, SSR125, structural genomics, P 98.05
3rsb_A196 Adenosylcobinamide-phosphate guanylyltransferase; 98.05
1i52_A236 4-diphosphocytidyl-2-C-methylerythritol synthase; 98.03
1e5k_A201 Molybdopterin-guanine dinucleotide biosynthesis pr 97.9
2yc3_A228 2-C-methyl-D-erythritol 4-phosphate cytidylyltran 97.85
1w55_A 371 ISPD/ISPF bifunctional enzyme; biosynthetic pathwa 97.75
2e8b_A201 Probable molybdopterin-guanine dinucleotide biosy 97.62
2dpw_A232 Hypothetical protein TTHA0179; transferase, struct 97.57
2xme_A232 CTP-inositol-1-phosphate cytidylyltransferase; CDP 97.41
2px7_A236 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 97.4
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-79  Score=633.29  Aligned_cols=348  Identities=38%  Similarity=0.675  Sum_probs=317.1

Q ss_pred             CCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCC-CC-CccccCCCCCcccccc
Q 016922           22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESL-DLPRVDRIIRCSLRSQGL-PV-AAIEPVPERSVSTVEE   98 (380)
Q Consensus        22 ~~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~L~~ql~~i-d~~~~~~~~~~~~~~~~~-~~-~~~~p~p~~~~~~~~~   98 (380)
                      ++++++++++|+++||+|||+||++|+++||++|++||+.+ |++.+..+++++...+.. .. ..++|+|++.+.++.+
T Consensus         3 ~~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~~d~~~l~~~~~~~~~~~~~~~~~~~i~p~p~~~~~~~~~   82 (486)
T 2yqc_A            3 VKSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTNSTSRNFTQLPNEQTASTLD   82 (486)
T ss_dssp             CCCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTC----CCCEECCCGGGEEETTT
T ss_pred             hhhHHHHHHHHHHcCcHHHhhhhccCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccccccccccccCCChhhcccccc
Confidence            46678999999999999999999999999999999999999 999999999988765432 22 2489999988888877


Q ss_pred             CChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016922           99 RTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSG  178 (380)
Q Consensus        99 ~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~PKg~~~i~l~s~ksllq~~~e~i~~l~~la~~~~~~~~~~~  178 (380)
                      .+.+++.+|++.|+++|++||||+|+||||+|||||++.||||+||++|++|||||+++++|+++++++.+.++.   ..
T Consensus        83 ~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~---~~  159 (486)
T 2yqc_A           83 LSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKS---TK  159 (486)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTC---SS
T ss_pred             CChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCC---Cc
Confidence            777888899999999999999999999999999999999999999999999999999999999999998765431   13


Q ss_pred             CCceeEEEEcCCCchHHHHHHHhhcCCCCCCCCceEEEEeCCeeeEecCC-cccccCCCccccccCCCchhhHHHhhCCh
Q 016922          179 SAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKL  257 (380)
Q Consensus       179 ~~~ip~~IMTS~~t~e~t~~~f~~~~~FGl~~~~V~~f~Q~~~P~~~~~g-ki~l~~~~~i~~~P~GnGgi~~aL~~~g~  257 (380)
                      .+.||||||||++||+.|++||++|+|||+++++|+||+|+++||++.+| +++++++++++++|+||||+|.+|+++|+
T Consensus       160 ~~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~  239 (486)
T 2yqc_A          160 KPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGI  239 (486)
T ss_dssp             CCCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTH
T ss_pred             CCccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCc
Confidence            57799999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHHHHCCCeEEEEEcCCCcccccCCHHHHHHHHHhCCceEEEEeecCCCCcccceEEEEcCCCCeEEEEecccChhhhh
Q 016922          258 LEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLAS  337 (380)
Q Consensus       258 l~~l~~~Gi~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~d~~~kvv~k~~p~e~vGvl~~~~~~g~~~vvEYsel~~~~~~  337 (380)
                      +++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.|+|++|++|++..||+++|+||+|+++++++
T Consensus       240 Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~  319 (486)
T 2yqc_A          240 LDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELAN  319 (486)
T ss_dssp             HHHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHH
T ss_pred             HHHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999998633689999999999999887


Q ss_pred             hhccCC--CcceeccccccchhccHHHHHHHHhccccC
Q 016922          338 AINQET--GRLRFCWSNVCLHMFTLDFLNQVANGLEKD  373 (380)
Q Consensus       338 ~~~~~~--g~l~f~~gNi~~~~f~l~fL~~~~~~~~~~  373 (380)
                      ..+ .+  |.+.|+++|||||||+++||++++...+..
T Consensus       320 ~~~-~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~  356 (486)
T 2yqc_A          320 KKD-PQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISS  356 (486)
T ss_dssp             CEE-TTEEEEESSCEEEEEEEEEEHHHHHHHHHHHTTC
T ss_pred             ccc-ccccccccccceeEEEEEEeHHHHHHHHHhhcCc
Confidence            554 24  778899999999999999999966555444
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 Back     alignment and structure
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* Back     alignment and structure
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... Back     alignment and structure
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 Back     alignment and structure
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* Back     alignment and structure
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* Back     alignment and structure
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 Back     alignment and structure
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Back     alignment and structure
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} Back     alignment and structure
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* Back     alignment and structure
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} Back     alignment and structure
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* Back     alignment and structure
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A Back     alignment and structure
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} Back     alignment and structure
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 Back     alignment and structure
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* Back     alignment and structure
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 Back     alignment and structure
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Back     alignment and structure
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 Back     alignment and structure
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* Back     alignment and structure
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Back     alignment and structure
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} Back     alignment and structure
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* Back     alignment and structure
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A Back     alignment and structure
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 Back     alignment and structure
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} Back     alignment and structure
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} Back     alignment and structure
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} Back     alignment and structure
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A Back     alignment and structure
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* Back     alignment and structure
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* Back     alignment and structure
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* Back     alignment and structure
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} Back     alignment and structure
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 Back     alignment and structure
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* Back     alignment and structure
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 380
d1jv1a_ 501 c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor 1e-125
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 3e-77
d1w55a1205 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, 2e-05
d1w77a1226 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl- 1e-04
d1i52a_225 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 0.001
d2oi6a2248 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate 0.001
d2cu2a2268 c.68.1.20 (A:1-268) Putative mannose-1-phosphate g 0.002
d1vpaa_221 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 0.003
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]

 Score =  367 bits (944), Expect = e-125
 Identities = 150/354 (42%), Positives = 203/354 (57%), Gaps = 15/354 (4%)

Query: 26  QALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QG 79
             L   L   GQE     W+EL   ++  L  ++++++   ++   + ++        Q 
Sbjct: 4   NDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQK 63

Query: 80  LPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPK 139
              A +EPVP   + +   R  D+ + W   GL  IS  K+AVLLL+GGQGTRLG + PK
Sbjct: 64  NVDARMEPVPREVLGSAT-RDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPK 122

Query: 140 GCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKY 199
           G  ++GLPS K+LFQ+QAERIL +Q++A +            I WYIMTS  T ++T+++
Sbjct: 123 GMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKC-----IIPWYIMTSGRTMESTKEF 177

Query: 200 FEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLE 259
           F  HKYFGL+ + V FFQQG +P +S DG+ I+E   KV+ APDGNGG+Y AL +  ++E
Sbjct: 178 FTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVE 237

Query: 260 DMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK 319
           DM  RGI  I  Y VDN LV+VADP F+G+ I KG   GAKVV K  P E VGV  R   
Sbjct: 238 DMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--V 295

Query: 320 GGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKD 373
            G   VVEYSE+  + A       GRL F   N+  H FT+ FL  V N  E  
Sbjct: 296 DGVYQVVEYSEISLATAQK-RSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQ 348
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Length = 205 Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 226 Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Length = 225 Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 248 Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Length = 268 Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
d1jv1a_ 501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 100.0
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 100.0
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 99.46
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 99.44
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 99.26
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 99.19
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 99.12
d1g97a2250 N-acetylglucosamine 1-phosphate uridyltransferase 99.08
d2oi6a2248 N-acetylglucosamine 1-phosphate uridyltransferase 98.97
d1tzfa_259 Glucose-1-phosphate cytidylyltransferase RfbF {Sal 98.69
d1jyka_229 CTP:phosphocholine cytidylytransferase LicC {Strep 98.55
d1w77a1226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.34
d1vpaa_221 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.32
d1i52a_225 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.31
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 98.12
d1vgwa_226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.1
d1e5ka_188 Molybdenum cofactor biosynthesis protein MobA {Esc 98.04
d2dpwa1231 Uncharacterized protein TTHA0179 {Thermus thermoph 97.9
d1eyra_225 CMP acylneuraminate synthetase {Neisseria meningit 95.58
d1qwja_228 CMP acylneuraminate synthetase {Mouse (Mus musculu 95.15
d1vh1a_246 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 93.15
d1h7ea_245 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 90.27
d1vica_255 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 88.1
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]

Probab=100.00  E-value=8e-88  Score=691.50  Aligned_cols=346  Identities=43%  Similarity=0.695  Sum_probs=318.9

Q ss_pred             CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCCCCccccCCCCCcccc
Q 016922           23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QGLPVAAIEPVPERSVSTV   96 (380)
Q Consensus        23 ~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~L~~ql~~id~~~~~~~~~~~~~~------~~~~~~~~~p~p~~~~~~~   96 (380)
                      |+.++|+++|+++||+|||++|+.|+++||++|++||.++|++.+.++|+++++.      ...++..++|+|+..+...
T Consensus         1 m~~~~l~~~L~~~gQ~HLl~~~~~l~~~ek~~L~~qL~~id~~~l~~~~~~a~~~~~~~~~~~~~~~~~~p~p~~~~~~~   80 (501)
T d1jv1a_           1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSA   80 (501)
T ss_dssp             CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC-----------CCBCCCGGGEEET
T ss_pred             CCHHHHHHHHHHhCcHHHHhhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhhcccccCccccccCCChhhhccc
Confidence            6789999999999999999999999999999999999999999999999988653      1245677999987654444


Q ss_pred             ccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q 016922           97 EERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGG  176 (380)
Q Consensus        97 ~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~PKg~~~i~l~s~ksllq~~~e~i~~l~~la~~~~~~~~~  176 (380)
                      .. ..++..+|+++|+++|++||||+|+||||+|||||+++|||++||++++++||||++++||++++++|.++.+    
T Consensus        81 ~~-~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~~~----  155 (501)
T d1jv1a_          81 TR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG----  155 (501)
T ss_dssp             TT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS----
T ss_pred             cc-ChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHhcC----
Confidence            33 3456788999999999999999999999999999999999999999999999999999999999999887654    


Q ss_pred             CCCCceeEEEEcCCCchHHHHHHHhhcCCCCCCCCceEEEEeCCeeeEecCCcccccCCCccccccCCCchhhHHHhhCC
Q 016922          177 SGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK  256 (380)
Q Consensus       177 ~~~~~ip~~IMTS~~t~e~t~~~f~~~~~FGl~~~~V~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GnGgi~~aL~~~g  256 (380)
                       +++.||||||||+.||++|++||++|+|||+++++|+||+|+++||+|.+|+++++++++++++|+||||+|.+|+++|
T Consensus       156 -~~~~iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG  234 (501)
T d1jv1a_         156 -NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQN  234 (501)
T ss_dssp             -SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTT
T ss_pred             -CCCCceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceECCCCCcccCCCCcccccCCCchHHHHHHHHCC
Confidence             5788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHCCCeEEEEEcCCCcccccCCHHHHHHHHHhCCceEEEEeecCCCCcccceEEEEcCCCCeEEEEecccChhhh
Q 016922          257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA  336 (380)
Q Consensus       257 ~l~~l~~~Gi~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~d~~~kvv~k~~p~e~vGvl~~~~~~g~~~vvEYsel~~~~~  336 (380)
                      ++++|.++|++|++|+||||+|++++||.|||||+.+++++++||++|+.|+|++|++|+.  ||+++||||+|++++++
T Consensus       235 ~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~--dg~~~vvEysel~~~~~  312 (501)
T d1jv1a_         235 IVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATA  312 (501)
T ss_dssp             HHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHH
T ss_pred             cHHHHHHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE--CCeEEEEEeccCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999997  79999999999999998


Q ss_pred             hhhccCCCcceeccccccchhccHHHHHHHHhccccCCCCC
Q 016922          337 SAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVLL  377 (380)
Q Consensus       337 ~~~~~~~g~l~f~~gNi~~~~f~l~fL~~~~~~~~~~~~~~  377 (380)
                      ++.+ ++|++.|++||||||||+++||+++++.++..++++
T Consensus       313 ~~~~-~~g~l~f~~~Ni~~~~fsl~fl~~~~~~~~~~l~~h  352 (501)
T d1jv1a_         313 QKRS-SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHH  352 (501)
T ss_dssp             HCBC-TTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCE
T ss_pred             hhcc-CCCcccccccceeheeeEHHHHHHHHHhcccCCCce
Confidence            8665 589999999999999999999999998777666654
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]} Back     information, alignment and structure
>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} Back     information, alignment and structure
>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure