Citrus Sinensis ID: 017022

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGGG
cccccccHHHHHHHHcccccccccccccccccHHHHHHHHHccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHcHHcccccEEEEcccccccccEEccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
cccccccHHHHHHHHHHHccccccccEEEcccccHHHHccccccEEEEccHHHHHHcHHcccHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHcccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHcEEEEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
madgsypsvfqkmqgqsyfisgvspnlyahnysvagsfvnrgsqnsfwaasqgtglalvspvspifvqapseksLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEmikngrlshpykgisdcfartvkdegilslwrgntaNVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAgnlasggaagaSSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLksdgiaglyrgfSISCVGIIVYRGLYfgmydslkpvvltdgmqdSFLASFLLGWGitigaglasypiDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGkkygsgggg
MADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAkaakkggerqfngLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKkygsgggg
MADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNlasggaagassllFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRavagagvlagYDKLQLVLFgkkygsgggg
**************GQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKY******
*****YP************************YSVAGSFVNRGSQNSFWAASQGTGLALVSPVS*************SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQD***********YKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAA****ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLF***Y******
MADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGGG
****SYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKK*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGGG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
O49447379 ADP,ATP carrier protein 3 yes no 0.992 0.992 0.820 1e-173
P25083386 ADP,ATP carrier protein, N/A no 0.984 0.966 0.760 1e-158
O22342386 ADP,ATP carrier protein 1 N/A no 0.984 0.966 0.773 1e-157
P12857387 ADP,ATP carrier protein 2 N/A no 0.994 0.974 0.748 1e-156
P04709387 ADP,ATP carrier protein 1 N/A no 0.994 0.974 0.748 1e-156
P31691382 ADP,ATP carrier protein, no no 0.976 0.968 0.765 1e-156
P40941385 ADP,ATP carrier protein 2 no no 0.965 0.950 0.747 1e-155
P27081386 ADP,ATP carrier protein, N/A no 0.986 0.968 0.742 1e-153
Q41629331 ADP,ATP carrier protein 1 N/A no 0.854 0.978 0.828 1e-149
P31167381 ADP,ATP carrier protein 1 no no 0.960 0.955 0.748 1e-148
>sp|O49447|ADT3_ARATH ADP,ATP carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=AAC3 PE=1 SV=1 Back     alignment and function desciption
 Score =  607 bits (1564), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 310/378 (82%), Positives = 342/378 (90%), Gaps = 2/378 (0%)

Query: 3   DGS-YPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSP 61
           DGS +PSVFQK+ GQSY I+ +SP++ A  Y V+G++VN G Q+     S G G +L+  
Sbjct: 2   DGSKHPSVFQKLHGQSYLINRLSPSVQARGYCVSGAYVNGGLQSLLQPTSHGVGSSLIPH 61

Query: 62  VS-PIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSH 120
            S P+   APSEK+ + FL+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK GRLS 
Sbjct: 62  GSFPVLAHAPSEKTGTGFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSE 121

Query: 121 PYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYW 180
           PYKGISDCFARTVKDEG+L+LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK++DGYW
Sbjct: 122 PYKGISDCFARTVKDEGMLALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKEKDGYW 181

Query: 181 KWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSD 240
           KWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGG+RQFNG++DVYKKT+ SD
Sbjct: 182 KWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGQRQFNGMVDVYKKTIASD 241

Query: 241 GIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLA 300
           GI GLYRGF+ISCVGI+VYRGLYFG+YDSLKPVVL DG+QDSFLASFLLGWGITIGAGLA
Sbjct: 242 GIVGLYRGFNISCVGIVVYRGLYFGLYDSLKPVVLVDGLQDSFLASFLLGWGITIGAGLA 301

Query: 301 SYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAG 360
           SYPIDTVRRRMMMTSGEAVKYKSSL AF +I+KNEG KSLFKGAGANILRAVAGAGVLAG
Sbjct: 302 SYPIDTVRRRMMMTSGEAVKYKSSLQAFSQIVKNEGAKSLFKGAGANILRAVAGAGVLAG 361

Query: 361 YDKLQLVLFGKKYGSGGG 378
           YDKLQL++ GKKYGSGGG
Sbjct: 362 YDKLQLIVLGKKYGSGGG 379
Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1 Back     alignment and function description
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2 Back     alignment and function description
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3 Back     alignment and function description
>sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1 Back     alignment and function description
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=AAC2 PE=1 SV=2 Back     alignment and function description
>sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1 Back     alignment and function description
>sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=AAC1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
84468306371 putative ADP,ATP carrier-like protein [T 0.976 0.997 0.841 1e-173
255553691379 ADP,ATP carrier protein, putative [Ricin 0.970 0.970 0.848 1e-172
84453194371 putative ADP ATP carrier protein [Trifol 0.976 0.997 0.839 1e-172
15235280379 ADP/ATP carrier 3 protein [Arabidopsis t 0.992 0.992 0.820 1e-171
224095515378 predicted protein [Populus trichocarpa] 0.994 0.997 0.820 1e-170
297799132380 hypothetical protein ARALYDRAFT_491934 [ 0.992 0.989 0.812 1e-170
356542971371 PREDICTED: ADP,ATP carrier protein 3, mi 0.976 0.997 0.841 1e-170
359807112372 uncharacterized protein LOC100802974 [Gl 0.952 0.970 0.837 1e-169
21593729379 ADP,ATP carrier-like protein [Arabidopsi 0.992 0.992 0.814 1e-169
217072692371 unknown [Medicago truncatula] gi|3885179 0.976 0.997 0.817 1e-167
>gi|84468306|dbj|BAE71236.1| putative ADP,ATP carrier-like protein [Trifolium pratense] Back     alignment and taxonomy information
 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/379 (84%), Positives = 341/379 (89%), Gaps = 9/379 (2%)

Query: 1   MADG-SYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALV 59
           MADG  YPSV QK+ G SY +S +SPNL + +YS +G+F   G QNS        GLA+ 
Sbjct: 1   MADGPQYPSVAQKLGGHSYLVSRLSPNLNSRSYSTSGTFAYGGLQNS--------GLAIG 52

Query: 60  SPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLS 119
           SP+S I V APSEK  + FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLS
Sbjct: 53  SPLSSIMVPAPSEKGAAGFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKSGRLS 112

Query: 120 HPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY 179
            PYKGI DCFART+KDEG+++LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY
Sbjct: 113 EPYKGIGDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY 172

Query: 180 WKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKS 239
           WKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNG++DVY+KTL+S
Sbjct: 173 WKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGMVDVYRKTLQS 232

Query: 240 DGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGL 299
           DGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPVVL  GMQDSF ASFLLGW ITIGAGL
Sbjct: 233 DGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFFASFLLGWAITIGAGL 292

Query: 300 ASYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLA 359
           ASYPIDTVRRRMMMTSGEAVKYKSSLHAFQ I+  EGTKSLFKGAGANILRAVAGAGVLA
Sbjct: 293 ASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVAKEGTKSLFKGAGANILRAVAGAGVLA 352

Query: 360 GYDKLQLVLFGKKYGSGGG 378
           GYDKLQLVLFGKKYGSGGG
Sbjct: 353 GYDKLQLVLFGKKYGSGGG 371

Source: Trifolium pratense

Species: Trifolium pratense

Genus: Trifolium

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553691|ref|XP_002517886.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223542868|gb|EEF44404.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|84453194|dbj|BAE71194.1| putative ADP ATP carrier protein [Trifolium pratense] Back     alignment and taxonomy information
>gi|15235280|ref|NP_194568.1| ADP/ATP carrier 3 protein [Arabidopsis thaliana] gi|75219626|sp|O49447.1|ADT3_ARATH RecName: Full=ADP,ATP carrier protein 3, mitochondrial; AltName: Full=ADP/ATP translocase 3; AltName: Full=Adenine nucleotide translocator 3; Short=ANT 3; Flags: Precursor gi|2842480|emb|CAA16877.1| ADP, ATP carrier-like protein [Arabidopsis thaliana] gi|7269693|emb|CAB79641.1| ADP, ATP carrier-like protein [Arabidopsis thaliana] gi|26451091|dbj|BAC42650.1| putative ADP,ATP carrier [Arabidopsis thaliana] gi|332660077|gb|AEE85477.1| ADP/ATP carrier 3 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224095515|ref|XP_002310404.1| predicted protein [Populus trichocarpa] gi|222853307|gb|EEE90854.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297799132|ref|XP_002867450.1| hypothetical protein ARALYDRAFT_491934 [Arabidopsis lyrata subsp. lyrata] gi|297313286|gb|EFH43709.1| hypothetical protein ARALYDRAFT_491934 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356542971|ref|XP_003539937.1| PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|359807112|ref|NP_001241092.1| uncharacterized protein LOC100802974 [Glycine max] gi|255636069|gb|ACU18379.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|21593729|gb|AAM65696.1| ADP,ATP carrier-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|217072692|gb|ACJ84706.1| unknown [Medicago truncatula] gi|388517915|gb|AFK47019.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
TAIR|locus:2121363379 AAC3 "ADP/ATP carrier 3" [Arab 0.965 0.965 0.755 2.1e-148
TAIR|locus:2077778381 AAC1 "ADP/ATP carrier 1" [Arab 0.955 0.950 0.703 1.6e-132
TAIR|locus:2185041385 AAC2 "ADP/ATP carrier 2" [Arab 0.944 0.929 0.686 5.6e-132
ASPGD|ASPL0000018215311 AN4064 [Emericella nidulans (t 0.788 0.961 0.711 6.6e-113
POMBASE|SPBC530.10c322 anc1 "mitochondrial adenine nu 0.833 0.981 0.661 6.6e-113
UNIPROTKB|G4MKR0315 MGG_16149 "ADP,ATP carrier pro 0.770 0.926 0.702 4.8e-110
CGD|CAL0003655301 PET9 [Candida albicans (taxid: 0.773 0.973 0.697 9e-109
UNIPROTKB|Q5A516301 PET9 "Potential mitochondrial 0.773 0.973 0.697 9e-109
SGD|S000000126318 PET9 "Major ADP/ATP carrier of 0.791 0.943 0.674 1.2e-106
SGD|S000000289307 AAC3 "Mitochondrial inner memb 0.796 0.983 0.650 2e-104
TAIR|locus:2121363 AAC3 "ADP/ATP carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
 Identities = 278/368 (75%), Positives = 310/368 (84%)

Query:     3 DGS-YPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSP 61
             DGS +PSVFQK+ GQSY I+ +SP++ A  Y V+G++VN G Q+     S G G +L+  
Sbjct:     2 DGSKHPSVFQKLHGQSYLINRLSPSVQARGYCVSGAYVNGGLQSLLQPTSHGVGSSLIPH 61

Query:    62 VS-PIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSH 120
              S P+   APSEK+ + FL+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK GRLS 
Sbjct:    62 GSFPVLAHAPSEKTGTGFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSE 121

Query:   121 PYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYW 180
             PYKGISDCFARTVKDEG+L+LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK++DGYW
Sbjct:   122 PYKGISDCFARTVKDEGMLALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKEKDGYW 181

Query:   181 KWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSD 240
             KWFAGN             FVYSLDYARTRLANDAKAAKKGG+RQFNG++DVYKKT+ SD
Sbjct:   182 KWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGQRQFNGMVDVYKKTIASD 241

Query:   241 GIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLA 300
             GI GLYRGF+ISCVGI+VYRGLYFG+YDSLKPVVL DG+QDSFLASFLLGWGITIGAGLA
Sbjct:   242 GIVGLYRGFNISCVGIVVYRGLYFGLYDSLKPVVLVDGLQDSFLASFLLGWGITIGAGLA 301

Query:   301 SYPIDTVRRRMMMTSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXX 360
             SYPIDTVRRRMMMTSGEAVKYKSSL AF +I+KNEG KSLFKGAGANILR          
Sbjct:   302 SYPIDTVRRRMMMTSGEAVKYKSSLQAFSQIVKNEGAKSLFKGAGANILRAVAGAGVLAG 361

Query:   361 YDKLQLVL 368
             YDKLQL++
Sbjct:   362 YDKLQLIV 369
GO:0005215 "transporter activity" evidence=IEA
GO:0005471 "ATP:ADP antiporter activity" evidence=ISS;IDA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0015865 "purine nucleotide transport" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:2077778 AAC1 "ADP/ATP carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185041 AAC2 "ADP/ATP carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000018215 AN4064 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPBC530.10c anc1 "mitochondrial adenine nucleotide carrier Anc1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|G4MKR0 MGG_16149 "ADP,ATP carrier protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
CGD|CAL0003655 PET9 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A516 PET9 "Potential mitochondrial inner membrane ATP/ADP translocator" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000000126 PET9 "Major ADP/ATP carrier of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000000289 AAC3 "Mitochondrial inner membrane ADP/ATP translocator" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49382ADT_KLULANo assigned EC number0.73920.79680.9901yesno
Q41630ADT2_WHEATNo assigned EC number0.83220.83110.9516N/Ano
P02723ADT_NEUCRNo assigned EC number0.74670.80210.9712N/Ano
P51881ADT2_MOUSENo assigned EC number0.55290.75190.9563yesno
P18238ADT3_YEASTNo assigned EC number0.71000.80730.9967nono
P18239ADT2_YEASTNo assigned EC number0.74160.78360.9339yesno
Q27238ADT1_ANOGANo assigned EC number0.55250.75720.9534yesno
Q05962ADT1_RATNo assigned EC number0.55290.75190.9563yesno
P12857ADT2_MAIZENo assigned EC number0.74870.99470.9741N/Ano
O97470ADT_DICDINo assigned EC number0.50660.76510.9385yesno
P31691ADT_ORYSJNo assigned EC number0.76530.97620.9685nono
P12236ADT3_HUMANNo assigned EC number0.53640.77300.9832yesno
P27081ADT2_SOLTUNo assigned EC number0.74290.98680.9689N/Ano
P27080ADT_CHLRENo assigned EC number0.81960.79940.9837N/Ano
P31167ADT1_ARATHNo assigned EC number0.74860.96040.9553nono
O49447ADT3_ARATHNo assigned EC number0.82010.99200.9920yesno
Q41629ADT1_WHEATNo assigned EC number0.82820.85480.9788N/Ano
P40941ADT2_ARATHNo assigned EC number0.74730.96560.9506nono
O22342ADT1_GOSHINo assigned EC number0.77370.98410.9663N/Ano
P32007ADT3_BOVINNo assigned EC number0.54300.77300.9832yesno
P04709ADT1_MAIZENo assigned EC number0.74870.99470.9741N/Ano
Q09188ADT_SCHPONo assigned EC number0.73870.81790.9627yesno
P25083ADT1_SOLTUNo assigned EC number0.76090.98410.9663N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.64.623.1
hypothetical protein (378 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-123
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-27
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-19
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information 
 Score =  357 bits (919), Expect = e-123
 Identities = 166/303 (54%), Positives = 209/303 (68%), Gaps = 12/303 (3%)

Query: 73  KSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM--IKNGRLSHPYKGISDCFA 130
              ++F  DFLMGG+SAA+SKTA APIERVK+LIQ QD +  IK+G++   Y GI +CF 
Sbjct: 2   DKKTNFATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPR-YSGIVNCFR 60

Query: 131 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLF-NFKKDRDGYWKWFAGNLAS 189
           R  K++G+LSLWRGNTANVIRYFPTQA NFAFKDYFK +F  + +  D +WK+F  N+ S
Sbjct: 61  RVSKEQGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTD-FWKFFGVNILS 119

Query: 190 GGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 249
           GG AGASSLL VY LD+ARTRLA+D     KGG+R+F GL D   K  K  G   LY+GF
Sbjct: 120 GGLAGASSLLIVYPLDFARTRLASD---IGKGGDREFTGLFDCLMKISKQTGFLSLYQGF 176

Query: 250 SISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRR 309
            +S  GIIVYRG YFG+YDS K ++  +    + L  + +   +TI AGL SYP DTVRR
Sbjct: 177 GVSVQGIIVYRGAYFGLYDSAKALLFGNDKNTNILYKWAVAQTVTILAGLISYPFDTVRR 236

Query: 310 RMMMTSG----EAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQ 365
           RMMM SG      ++Y  +L  +++I+KNEG    FKGA AN+LR   GA VL  YD+LQ
Sbjct: 237 RMMMMSGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLRGAGGALVLVFYDELQ 296

Query: 366 LVL 368
            +L
Sbjct: 297 KLL 299

Length = 300
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 99.98
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.96
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.93
KOG2745321 consensus Mitochondrial carrier protein [General f 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.9
KOG1519297 consensus Predicted mitochondrial carrier protein 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG2954427 consensus Mitochondrial carrier protein [General f 99.66
KOG2745321 consensus Mitochondrial carrier protein [General f 99.65
KOG2954427 consensus Mitochondrial carrier protein [General f 98.77
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-59  Score=399.46  Aligned_cols=284  Identities=25%  Similarity=0.399  Sum_probs=249.2

Q ss_pred             HHHHHHhhHHHHHHHhhcCcHHHHHHHHHcCchhhhcCCCCCCCCchHHHHHHHhhccccccccccchhhHHhHhHHHHH
Q 017022           79 LVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQAL  158 (379)
Q Consensus        79 ~~~~~ag~~a~~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~~  158 (379)
                      +.++++|+.||+++++++||+|++|+|+|++...   ......|++++++++.|+|.||++|||||+.|++++..+.+++
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~---~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgi   82 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR---TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGL   82 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc---cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHH
Confidence            4566999999999999999999999999998432   1234559999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCCCchhhhHHHhHHHhHHhHHHHhhHchHHHHHHHHhcccchhhcCCCCCCCcHHHHHHHHHh
Q 017022          159 NFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLK  238 (379)
Q Consensus       159 ~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (379)
                      ||.+||.+|+++.+..+...  ..+..++++++.||++..++|+|+.|+|||+|.|....   ....|+++++++++|++
T Consensus        83 YF~~Y~~~K~~~~~~~~~~~--l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~---~~~~Y~~~f~a~rki~k  157 (299)
T KOG0764|consen   83 YFFFYDFLKSFITEGFNSGL--LSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV---QSTAYKGMFDALRKIYK  157 (299)
T ss_pred             HHHHHHHHHHHHhcCCCccc--chHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc---cccccccHHHHHHHHHH
Confidence            99999999999965444332  35678999999999999999999999999999987632   34689999999999999


Q ss_pred             hcCccccccchhhhhhHHHhhhhHHHHHHHhhhhhhhcCCC--Cc---hhHHHHHHHHHHHHHHHhhhcHHHHHHHhhcc
Q 017022          239 SDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGM--QD---SFLASFLLGWGITIGAGLASYPIDTVRRRMMM  313 (379)
Q Consensus       239 ~~G~~gly~G~~~~l~r~~~~~~i~~~~ye~~k~~~~~~~~--~~---~~~~~~~~~~~ag~~~~~~t~Pldviktr~q~  313 (379)
                      +||++|||+|+.|.++... ..+++|..||.+|..+.+...  .+   +.+..++.+.++.++++.+|||++|+|+|||.
T Consensus       158 ~EG~rgLY~GlVP~L~Gvs-hgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~  236 (299)
T KOG0764|consen  158 EEGFRGLYKGLVPGLLGVS-HGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQD  236 (299)
T ss_pred             HHhHHHHHhhhhhHhhhhc-hhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHh
Confidence            9999999999999999665 999999999999999854222  22   34566677779999999999999999999998


Q ss_pred             cCCCCcccCCHHHHHHHHHHhhchhhhccchHHHHHHHhhhHHH-HHHHHHHHHHHcCCC
Q 017022          314 TSGEAVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGV-LAGYDKLQLVLFGKK  372 (379)
Q Consensus       314 ~~~~~~~~~~~~~~~~~i~~~eG~~gly~G~~~~l~~~~~~~~~-~~~ye~~~~~~~~~~  372 (379)
                      ++. .+.|.+++++++++|++||++|||||+.++++|.+|.+.+ |..||.+++++....
T Consensus       237 ~~~-~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~  295 (299)
T KOG0764|consen  237 QSD-NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR  295 (299)
T ss_pred             ccc-CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence            654 6789999999999999999999999999999999999888 999999999887654

>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-71
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-14
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  264 bits (674), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 146/299 (48%), Positives = 190/299 (63%), Gaps = 9/299 (3%)
Query: 71  SEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA 130
           S+++LS FL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  
Sbjct: 1   SDQALS-FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVV 58
Query: 131 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXX 189
           R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN   
Sbjct: 59  RIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLAS 118
Query: 190 XXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 249
                     FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GF
Sbjct: 119 GGAAGATSLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGF 176
Query: 250 SISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRR 309
           ++S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRR
Sbjct: 177 NVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 235
Query: 310 RMMMTSGEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRXXXXXXXXXXYDKLQ 365
           RMMM SG     + Y  ++  +++I K+EG K+ FKGA +N+LR          YD+++
Sbjct: 236 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIK 294
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-142
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-42
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-33
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-24
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  404 bits (1040), Expect = e-142
 Identities = 161/302 (53%), Positives = 208/302 (68%), Gaps = 9/302 (2%)

Query: 71  SEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFA 130
           S+++LS FL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  
Sbjct: 1   SDQALS-FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQH-ASKQISAEKQYKGIIDCVV 58

Query: 131 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLAS 189
           R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNLAS
Sbjct: 59  RIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLAS 118

Query: 190 GGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 249
           GGAAGA+SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GF
Sbjct: 119 GGAAGATSLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGF 176

Query: 250 SISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRR 309
           ++S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRR
Sbjct: 177 NVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR 235

Query: 310 RMMMTSGEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQL 366
           RMMM SG     + Y  ++  +++I K+EG K+ FKGA +N+LR + GA VL  YD+++ 
Sbjct: 236 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKK 295

Query: 367 VL 368
            +
Sbjct: 296 FV 297
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=2.3e-57  Score=419.01  Aligned_cols=289  Identities=53%  Similarity=0.881  Sum_probs=243.6

Q ss_pred             hhhHHHHHHhhHHHHHHHhhcCcHHHHHHHHHcCchhhhcCCCCCCCCchHHHHHHHhhccccccccccchhhHHhHhHH
Q 017022           76 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPT  155 (379)
Q Consensus        76 ~~~~~~~~ag~~a~~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~  155 (379)
                      .+.+..+++|++||+++.++++|+|+||||+|++..... ......|+++++++++++++||++|||||+.+++++.+|+
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~-~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccc-cccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            357789999999999999999999999999999864211 1112358999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccC-CCCCCchhhhHHHhHHHhHHhHHHHhhHchHHHHHHHHhcccchhhcCCCCCCCcHHHHHH
Q 017022          156 QALNFAFKDYFKRLFNFK-KDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYK  234 (379)
Q Consensus       156 ~~~~f~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~~~  234 (379)
                      .+++|.+||.+|+.+... ...+.........+++|++||++++++++|+|+||+|+|++...  ......|++++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~~  161 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNCIT  161 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC--CCcCcCCCCHHHHHH
Confidence            999999999999954332 22222223456789999999999999999999999999998531  122457899999999


Q ss_pred             HHHhhcCccccccchhhhhhHHHhhhhHHHHHHHhhhhhhhcCCCCchhHHHHHHHHHHHHHHHhhhcHHHHHHHhhccc
Q 017022          235 KTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMT  314 (379)
Q Consensus       235 ~i~~~~G~~gly~G~~~~l~r~~~~~~i~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~ag~~~~~~t~Pldviktr~q~~  314 (379)
                      +|+++||++|||||+.++++|.+|.++++|.+||.+|+.+.+. .+.+....++++.++|++++++++|+||||+|||.+
T Consensus       162 ~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~  240 (297)
T 1okc_A          162 KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ  240 (297)
T ss_dssp             HHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999987543 345567789999999999999999999999999987


Q ss_pred             CCC---CcccCCHHHHHHHHHHhhchhhhccchHHHHHHHhhhHHHHHHHHHHHHHH
Q 017022          315 SGE---AVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVL  368 (379)
Q Consensus       315 ~~~---~~~~~~~~~~~~~i~~~eG~~gly~G~~~~l~~~~~~~~~~~~ye~~~~~~  368 (379)
                      ...   ...|.++++|+++|+++||++|||||+.|+++|..++++.|.+||.+|+++
T Consensus       241 ~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          241 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             TTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccceeeehHHHHHHhhC
Confidence            532   346899999999999999999999999999999754444499999998763
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 379
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-49
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  166 bits (421), Expect = 1e-49
 Identities = 155/292 (53%), Positives = 196/292 (67%), Gaps = 8/292 (2%)

Query: 77  SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDE 136
           SFL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++
Sbjct: 5   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQ 63

Query: 137 GILSLWRGNTANVIRYFPTQALNFAFKD-YFKRLFNFKKDRDGYWKWFAGNLASGGAAGA 195
           G LS WRGN ANVIRYFPTQALNFAFKD Y +           +W++FAGNLASGGAAGA
Sbjct: 64  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 123

Query: 196 SSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVG 255
           +SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GF++S  G
Sbjct: 124 TSLCFVYPLDFARTRLAADVG--KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 181

Query: 256 IIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTS 315
           II+YR  YFG+YD+ K ++  D      + S+++   +T  AGL SYP DTVRRRMMM S
Sbjct: 182 IIIYRAAYFGVYDTAKGML-PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS 240

Query: 316 GEA---VKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKL 364
           G     + Y  ++  +++I K+EG K+ FKGA +N+LR + GA VL  YD++
Sbjct: 241 GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI 292

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=1e-52  Score=385.01  Aligned_cols=286  Identities=54%  Similarity=0.896  Sum_probs=250.4

Q ss_pred             hhhhHHHHHHhhHHHHHHHhhcCcHHHHHHHHHcCchhhhcCCCCCCCCchHHHHHHHhhccccccccccchhhHHhHhH
Q 017022           75 LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFP  154 (379)
Q Consensus        75 ~~~~~~~~~ag~~a~~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~  154 (379)
                      +.+++..++||++|++++.+++||||+||||+|++..... ......|+++++++++++++||+++||+|+.+.+++..+
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC-CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            4578999999999999999999999999999999865322 223345899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCC-CchhhhHHHhHHHhHHhHHHHhhHchHHHHHHHHhcccchhhcCCCCCCCcHHHHH
Q 017022          155 TQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVY  233 (379)
Q Consensus       155 ~~~~~f~~y~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ag~~~~~~~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~~  233 (379)
                      +..++|.+||.+++.+.+..... .........+++|++||+++.++++|+|++|+|+|++....  .....+.+..+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~--~~~~~~~~~~~~~  159 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--AAQREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--TTTCSCSSHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc--ccccccccHHHHH
Confidence            99999999999999887655433 33344567789999999999999999999999999986532  2345788999999


Q ss_pred             HHHHhhcCccccccchhhhhhHHHhhhhHHHHHHHhhhhhhhcCCCCchhHHHHHHHHHHHHHHHhhhcHHHHHHHhhcc
Q 017022          234 KKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMM  313 (379)
Q Consensus       234 ~~i~~~~G~~gly~G~~~~l~r~~~~~~i~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~ag~~~~~~t~Pldviktr~q~  313 (379)
                      ++++++||+++||+|+.++++|++|.++++|..||.+|+.+.+ ..+......++++.+++.+++++++|+||||+|||.
T Consensus       160 ~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~  238 (292)
T d1okca_         160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD-PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  238 (292)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG-GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccc-ccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHh
Confidence            9999999999999999999999999999999999999988744 344567888999999999999999999999999998


Q ss_pred             cCCC---CcccCCHHHHHHHHHHhhchhhhccchHHHHHHHhhhHHHHHHHHHH
Q 017022          314 TSGE---AVKYKSSLHAFQEIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKL  364 (379)
Q Consensus       314 ~~~~---~~~~~~~~~~~~~i~~~eG~~gly~G~~~~l~~~~~~~~~~~~ye~~  364 (379)
                      +...   ...|.++++++++++++||++|||||+.|+++|.++++++|.+||.+
T Consensus       239 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~~~ye~l  292 (292)
T d1okca_         239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI  292 (292)
T ss_dssp             TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhhhHhhcC
Confidence            7643   24688999999999999999999999999999987876669999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure