Citrus Sinensis ID: 017040

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MHTLRHTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN
cccHHHHHHHHHHccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccc
cccEHEcHHHHHcccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccccc
MHTLRHTISELiysspisspahfthphihiyshsipAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASgfrfgvdglrmdyyimtcpfgEQIVKNAVDRALDDDPTLAAALVRMHFHdcfiegcdgsvlidstqdnkaekdspgnlslrgyEVIDDAKnqleeqcpgvvsCADIIAMAARDAIfwaggpiydipkgrkdgrrskiedtinlpfptfnASELIRAFGQRGFTAQEMVVLSGAHTIgvarcssfksrltgvdptldsDFAKTLSktcsagdnaeqpfdatrndfdNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVdvkeggkgevrhncrkin
MHTLRHTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTqdnkaekdspgnlsLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWaggpiydipkgrkdgrrskiedtinlpfptfNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTcsagdnaeqpfDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVkeggkgevrhncrkin
MHTLRHTISELIYSSPISSPAHFThphihiyshsipAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVdraldddptlaaalVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCadiiamaardaiFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN
********SELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLID*****************RGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKG*******KIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTL***F*******************ATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDV****************
*****HTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNM**********LVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQD***EKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCS**DNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN
MHTLRHTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDST*********PGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN
**TLRHTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNC****
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MHTLRHTISELIYSSPISSPAHFTHPHIHIYSHSIPAYLYIFVLFYDIILVNMLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
Q9SZB9325 Peroxidase 47 OS=Arabidop yes no 0.859 1.0 0.705 1e-135
Q43872317 Peroxidase 64 OS=Arabidop no no 0.801 0.955 0.479 3e-80
Q9LT91322 Peroxidase 66 OS=Arabidop no no 0.761 0.894 0.473 4e-76
Q9SUT2326 Peroxidase 39 OS=Arabidop no no 0.828 0.960 0.435 7e-71
P22195316 Cationic peroxidase 1 OS= N/A no 0.788 0.943 0.433 2e-68
O23044326 Peroxidase 3 OS=Arabidops no no 0.820 0.950 0.426 3e-68
Q9SS67321 Peroxidase 28 OS=Arabidop no no 0.809 0.953 0.413 1e-66
Q43735321 Peroxidase 27 OS=Arabidop no no 0.801 0.943 0.431 1e-65
A7QEU4329 Peroxidase 5 OS=Vitis vin no no 0.764 0.878 0.485 4e-65
Q9LSY7329 Peroxidase 30 OS=Arabidop no no 0.748 0.860 0.449 6e-65
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function desciption
 Score =  482 bits (1241), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/326 (70%), Positives = 263/326 (80%), Gaps = 1/326 (0%)

Query: 53  MLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDR 112
           ML + +    K+V A ++S+ L M  I  GF F   GL M YY+M+CPF EQIVKN+V+ 
Sbjct: 1   MLTRFKKQNNKMVRANIVSMVLLMHAIV-GFPFHARGLSMTYYMMSCPFAEQIVKNSVNN 59

Query: 113 ALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKN 172
           AL  DPTLAA L+RM FHDCFIEGCD S+L+DST+DN AEKDSP NLSLRGYE+IDDAK 
Sbjct: 60  ALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKE 119

Query: 173 QLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNAS 232
           ++E +CPGVVSCADI+AMAARDA+FWAGGP YDIPKGR DG+RSKIEDT NLP P  NAS
Sbjct: 120 KIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRNLPSPFLNAS 179

Query: 233 ELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGD 292
           +LI+ FGQRGFT Q++V LSGAHT+GVARCSSFK+RLT  D +LDS FA TLSKTCSAGD
Sbjct: 180 QLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVPDSSLDSTFANTLSKTCSAGD 239

Query: 293 NAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQ 352
           NAEQPFDATRNDFDN YFNAL  K+GVLFSDQTL    +TR  VNGYA+NQA FF DFQQ
Sbjct: 240 NAEQPFDATRNDFDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAKFFFDFQQ 299

Query: 353 AMVKMGMVDVKEGGKGEVRHNCRKIN 378
           AM KM  +DVK G +GEVR NCR IN
Sbjct: 300 AMRKMSNLDVKLGSQGEVRQNCRSIN 325
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q43872|PER64_ARATH Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1 Back     alignment and function description
>sp|Q9LT91|PER66_ARATH Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1 Back     alignment and function description
>sp|A7QEU4|PER5_VITVI Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2 Back     alignment and function description
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
211906546323 class III peroxidase [Gossypium hirsutum 0.846 0.990 0.816 1e-158
255553951315 Peroxidase 47 precursor, putative [Ricin 0.820 0.984 0.803 1e-150
356576583327 PREDICTED: peroxidase 47-like [Glycine m 0.862 0.996 0.749 1e-145
356530973328 PREDICTED: peroxidase 47-like [Glycine m 0.862 0.993 0.756 1e-144
224077664316 predicted protein [Populus trichocarpa] 0.833 0.996 0.740 1e-142
357504149327 Peroxidase [Medicago truncatula] gi|3554 0.862 0.996 0.721 1e-142
217072506327 unknown [Medicago truncatula] gi|3884937 0.862 0.996 0.718 1e-141
356559955324 PREDICTED: peroxidase 47-like [Glycine m 0.851 0.993 0.725 1e-139
388496102324 unknown [Lotus japonicus] 0.854 0.996 0.724 1e-137
149275417322 anionic peroxidase swpa7 [Ipomoea batata 0.828 0.972 0.723 1e-134
>gi|211906546|gb|ACJ11766.1| class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/321 (81%), Positives = 289/321 (90%), Gaps = 1/321 (0%)

Query: 59  MSLAKLV-MAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDD 117
           ++L K++ MA +LS+F+ MEV+A GFRFGVDGLRMDYYIM+CPF E IVKN V+RAL DD
Sbjct: 3   LNLVKMITMANMLSMFILMEVVAGGFRFGVDGLRMDYYIMSCPFAESIVKNTVNRALQDD 62

Query: 118 PTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKNQLEEQ 177
           PTLAAALVRMHFHDCF+EGCDGS+LIDST+DN AEKDSPGNLSLRGYEVIDDAK QLE+Q
Sbjct: 63  PTLAAALVRMHFHDCFVEGCDGSILIDSTKDNTAEKDSPGNLSLRGYEVIDDAKEQLEDQ 122

Query: 178 CPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRA 237
           CPG+VSCADI+AMAARDAIFW+ GP+YDIPKGRKDGRRSKIEDTINLPFPTFN SELI A
Sbjct: 123 CPGIVSCADIVAMAARDAIFWSEGPVYDIPKGRKDGRRSKIEDTINLPFPTFNTSELISA 182

Query: 238 FGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGDNAEQP 297
           FG+RGF+AQEMV LSGAHT+GVARCSSFK+RL+  D  LDS+FAKTLSKTCSAGDNAEQP
Sbjct: 183 FGKRGFSAQEMVALSGAHTLGVARCSSFKNRLSNADANLDSNFAKTLSKTCSAGDNAEQP 242

Query: 298 FDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKM 357
           FDAT+N FDN YFNALIRK+GVLFSDQ L T  +TR  VNGYAMNQAMFF DFQQAMVKM
Sbjct: 243 FDATQNTFDNFYFNALIRKSGVLFSDQVLYTTPRTRNIVNGYAMNQAMFFFDFQQAMVKM 302

Query: 358 GMVDVKEGGKGEVRHNCRKIN 378
           G VDVKEG  GEVR NCRKIN
Sbjct: 303 GKVDVKEGSNGEVRQNCRKIN 323

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553951|ref|XP_002518016.1| Peroxidase 47 precursor, putative [Ricinus communis] gi|223542998|gb|EEF44534.1| Peroxidase 47 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356576583|ref|XP_003556410.1| PREDICTED: peroxidase 47-like [Glycine max] Back     alignment and taxonomy information
>gi|356530973|ref|XP_003534053.1| PREDICTED: peroxidase 47-like [Glycine max] Back     alignment and taxonomy information
>gi|224077664|ref|XP_002305351.1| predicted protein [Populus trichocarpa] gi|222848315|gb|EEE85862.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357504149|ref|XP_003622363.1| Peroxidase [Medicago truncatula] gi|355497378|gb|AES78581.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|217072506|gb|ACJ84613.1| unknown [Medicago truncatula] gi|388493730|gb|AFK34931.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356559955|ref|XP_003548261.1| PREDICTED: peroxidase 47-like [Glycine max] Back     alignment and taxonomy information
>gi|388496102|gb|AFK36117.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|149275417|gb|ABR23053.1| anionic peroxidase swpa7 [Ipomoea batatas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.859 1.0 0.647 1.4e-110
TAIR|locus:2165820317 PER64 "peroxidase 64" [Arabido 0.806 0.962 0.434 6.9e-63
TAIR|locus:2166508322 AT5G51890 [Arabidopsis thalian 0.748 0.878 0.433 7.1e-61
TAIR|locus:2128308326 AT4G11290 [Arabidopsis thalian 0.806 0.935 0.401 1.5e-58
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.820 0.950 0.392 6.1e-55
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.817 0.933 0.381 1.6e-54
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.806 0.950 0.389 1.1e-53
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.812 0.956 0.393 8e-53
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.812 0.933 0.386 5.6e-52
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.748 0.904 0.402 1.5e-51
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
 Identities = 211/326 (64%), Positives = 241/326 (73%)

Query:    53 MLLKSRMSLAKLVMAKLLSVFLFMEVIASGFRFGVDGLRMDYYIMTCPFGEQIVKNAVXX 112
             ML + +    K+V A ++S+ L M  I  GF F   GL M YY+M+CPF EQIVKN+V  
Sbjct:     1 MLTRFKKQNNKMVRANIVSMVLLMHAIV-GFPFHARGLSMTYYMMSCPFAEQIVKNSVNN 59

Query:   113 XXXXXXXXXXXXVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSLRGYEVIDDAKN 172
                         +RM FHDCFIEGCD S+L+DST+DN AEKDSP NLSLRGYE+IDDAK 
Sbjct:    60 ALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKE 119

Query:   173 QLEEQCPGVVSCXXXXXXXXXXXXFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNAS 232
             ++E +CPGVVSC            FWAGGP YDIPKGR DG+RSKIEDT NLP P  NAS
Sbjct:   120 KIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRNLPSPFLNAS 179

Query:   233 ELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSRLTGVDPTLDSDFAKTLSKTCSAGD 292
             +LI+ FGQRGFT Q++V LSGAHT+GVARCSSFK+RLT  D +LDS FA TLSKTCSAGD
Sbjct:   180 QLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVPDSSLDSTFANTLSKTCSAGD 239

Query:   293 NAEQPFDATRNDFDNLYFNALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQ 352
             NAEQPFDATRNDFDN YFNAL  K+GVLFSDQTL    +TR  VNGYA+NQA FF DFQQ
Sbjct:   240 NAEQPFDATRNDFDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAKFFFDFQQ 299

Query:   353 AMVKMGMVDVKEGGKGEVRHNCRKIN 378
             AM KM  +DVK G +GEVR NCR IN
Sbjct:   300 AMRKMSNLDVKLGSQGEVRQNCRSIN 325
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006598 "polyamine catabolic process" evidence=RCA
GO:0009698 "phenylpropanoid metabolic process" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA
TAIR|locus:2165820 PER64 "peroxidase 64" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166508 AT5G51890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SZB9PER47_ARATH1, ., 1, 1, ., 1, ., 70.70550.85971.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976
4th Layer1.11.1.16LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_IV000380
hypothetical protein (316 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-161
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 1e-82
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-72
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-27
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 6e-21
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 4e-10
cd00692328 cd00692, ligninase, Ligninase and other manganese- 1e-09
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 5e-08
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-07
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 8e-07
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  453 bits (1169), Expect = e-161
 Identities = 161/298 (54%), Positives = 199/298 (66%), Gaps = 9/298 (3%)

Query: 89  GLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQD 148
            L + +Y  +CP  E IV++ V  A+  DP LAAAL+R+HFHDCF+ GCD SVL+DST +
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 149 NKAEKDSPGNLSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPK 208
           N +EKD+P NLSLRG++VIDD K  LE  CPGVVSCADI+A+AARDA+  AGGP Y++P 
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 209 GRKDGRRSKIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKSR 268
           GR+DGR S   D  NLP P F+ S+LI  F  +G T  ++V LSGAHTIG A CSSF  R
Sbjct: 121 GRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSDR 180

Query: 269 L------TGVDPTLDSDFAKTLSKTCSAG--DNAEQPFD-ATRNDFDNLYFNALIRKAGV 319
           L         DPTLD  +A  L K C AG  D+   P D  T N FDN Y+  L+   G+
Sbjct: 181 LYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRGL 240

Query: 320 LFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKI 377
           L SDQ LL++ +TRA VN YA NQ  FF DF  AMVKMG + V  G +GE+R NCR +
Sbjct: 241 LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.3
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.2e-104  Score=775.32  Aligned_cols=294  Identities=43%  Similarity=0.739  Sum_probs=279.1

Q ss_pred             ccCCccCCCCcchhhcCCccHHHHHHHHHHHHHhcCCChhhHHHHHhhcccCccCCCceeeecCCCCCccccCCCCCCCC
Q 017040           82 GFRFGVDGLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLSL  161 (378)
Q Consensus        82 ~~~~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSiLLd~t~~~~~E~~~~~N~~L  161 (378)
                      ....++++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++   ..||++++|.+|
T Consensus        17 ~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l   93 (324)
T PLN03030         17 TTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLL   93 (324)
T ss_pred             cccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCc
Confidence            34455578999999999999999999999999999999999999999999999999999999965   379999999999


Q ss_pred             chhhhHHHHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCCccccCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHhC
Q 017040          162 RGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRAFGQR  241 (378)
Q Consensus       162 rg~~vId~iK~~le~~CP~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~LP~p~~~~~~l~~~F~~~  241 (378)
                      +|||+||.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|.+.++.+||.|+.+++++++.|++|
T Consensus        94 ~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~  173 (324)
T PLN03030         94 RGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAK  173 (324)
T ss_pred             chHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999987766678999999999999999999


Q ss_pred             CCChhhhhhhhccccccccccccCCCCCCC-------CCCCCCHHHHHHhcccCCC-CC--CCCCCCCCCCCccccHHHH
Q 017040          242 GFTAQEMVVLSGAHTIGVARCSSFKSRLTG-------VDPTLDSDFAKTLSKTCSA-GD--NAEQPFDATRNDFDNLYFN  311 (378)
Q Consensus       242 Gls~~elVaLsGAHTiG~ahc~~f~~Rl~~-------~Dp~ld~~f~~~L~~~Cp~-g~--~~~~lD~~TP~~FDN~Yyk  311 (378)
                      |||.+|||+||||||||++||.+|.+|||+       +||+||+.|++.||+.||. ++  +.+++|+.||.+|||+||+
T Consensus       174 Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~  253 (324)
T PLN03030        174 GLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFS  253 (324)
T ss_pred             CCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHH
Confidence            999999999999999999999999999992       5999999999999999994 22  4678999999999999999


Q ss_pred             HHhhccccccchhhhhcChhhHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCccCCCCCccccccccCC
Q 017040          312 ALIRKAGVLFSDQTLLTNAKTRAAVNGYAMNQ----AMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN  378 (378)
Q Consensus       312 nl~~~~glL~SD~~L~~d~~T~~~V~~yA~d~----~~Ff~~Fa~AmvKM~~lgvltG~~GEIR~~C~~vN  378 (378)
                      ||+.++|+|+|||+|++|++|+++|++||.|+    +.||++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       254 nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        254 NLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            99999999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 6e-64
1sch_A294 Peanut Peroxidase Length = 294 2e-59
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-51
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 1e-49
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-48
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 1e-45
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-42
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 5e-42
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-41
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-41
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 3e-41
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-41
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-41
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-41
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 4e-41
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 9e-41
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-40
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-40
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-39
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 9e-09
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-08
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 3e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 3e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 3e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 3e-08
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 2e-06
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 9e-06
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 3e-05
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 3e-05
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 5e-05
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 6e-05
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 9e-04
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 168/302 (55%), Gaps = 13/302 (4%)
Query: 90  LRMDYYIMTCPFGEQIVKNAVXXXXXXXXXXXXXXVRMHFHDCFIEGCDGSVLIDSTQDN 149
           L++ +Y  +CP  E +V+ AV              +RMHFHDCF+ GCD SVL+DST +N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 150 KAEKDS-PGNLSLRGYEVIDDAKNQLEEQCPGVVSCXXXXXXXXXXXXFWAGGPIYDIPK 208
            AEKD+ P N SLRG+EVI  AK+ +E  CP  VSC              AG   Y +P 
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121
Query: 209 GRKDGRRS-KIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKS 267
           GR+DG  S   E    +P P FNA++LI +F  +  TA EMV LSGAH+IGVA CSSF +
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181
Query: 268 RL------TGVDPTLDSDFAKTLSKTCSAGDNAEQPFDA-----TRNDFDNLYFNALIRK 316
           RL      +G+DPTL   +A  L  TC A      P        T +  DN+Y+  +   
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241
Query: 317 AGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRK 376
            G+L SDQ L+T A   AAV   AMN   +   F QAMVKMG ++V  G +GE+R NC  
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301
Query: 377 IN 378
           +N
Sbjct: 302 VN 303
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-159
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-159
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-158
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-157
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-156
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-154
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-153
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 8e-80
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-75
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 3e-70
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-70
2e39_A344 Peroxidase; heme protein, coordination geometry of 3e-67
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 7e-65
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 6e-64
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-26
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-24
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  449 bits (1157), Expect = e-159
 Identities = 139/302 (46%), Positives = 183/302 (60%), Gaps = 13/302 (4%)

Query: 90  LRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDN 149
           L++ +Y  +CP  E +V+ AV  A  ++  +A  L+RMHFHDCF+ GCD SVL+DST +N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 150 KAEKDSPGN-LSLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPK 208
            AEKD+  N  SLRG+EVI  AK+ +E  CP  VSCADI+A AARD+   AG   Y +P 
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121

Query: 209 GRKDGRRSKIEDT-INLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKS 267
           GR+DG  S   +    +P P FNA++LI +F  +  TA EMV LSGAH+IGVA CSSF +
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181

Query: 268 RL------TGVDPTLDSDFAKTLSKTCSA----GDNAEQPFDA-TRNDFDNLYFNALIRK 316
           RL      +G+DPTL   +A  L  TC A            D  T +  DN+Y+  +   
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241

Query: 317 AGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRK 376
            G+L SDQ L+T A   AAV   AMN   +   F QAMVKMG ++V  G +GE+R NC  
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301

Query: 377 IN 378
           +N
Sbjct: 302 VN 303
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=5.6e-106  Score=785.19  Aligned_cols=289  Identities=47%  Similarity=0.786  Sum_probs=279.9

Q ss_pred             CCcchhhcCCccHHHHHHHHHHHHHhcCCChhhHHHHHhhcccCccCCCceeeecCCCCCccccCCCCCC-CCchhhhHH
Q 017040           90 LRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNL-SLRGYEVID  168 (378)
Q Consensus        90 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSiLLd~t~~~~~E~~~~~N~-~Lrg~~vId  168 (378)
                      |+++||++|||++|+|||+.|++++.++|+++|++|||+||||||+||||||||++++++.+||++++|. +|+|||+||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999998888999999998 899999999


Q ss_pred             HHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCCccccCCCCCCCCCCCcccc-CCCCCCCccHHHHHHHHHhCCCChhh
Q 017040          169 DAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDT-INLPFPTFNASELIRAFGQRGFTAQE  247 (378)
Q Consensus       169 ~iK~~le~~CP~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~-~~LP~p~~~~~~l~~~F~~~Gls~~e  247 (378)
                      +||++||++||++||||||||||||+||+++|||.|+|++||||+++++..++ ++||+|+.++++|++.|++||||++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999987776 78999999999999999999999999


Q ss_pred             hhhhhccccccccccccCCCCCCC------CCCCCCHHHHHHhcccCCC--C--C-CCCCCCCCCCCccccHHHHHHhhc
Q 017040          248 MVVLSGAHTIGVARCSSFKSRLTG------VDPTLDSDFAKTLSKTCSA--G--D-NAEQPFDATRNDFDNLYFNALIRK  316 (378)
Q Consensus       248 lVaLsGAHTiG~ahc~~f~~Rl~~------~Dp~ld~~f~~~L~~~Cp~--g--~-~~~~lD~~TP~~FDN~Yyknl~~~  316 (378)
                      |||||||||||++||.+|.+|+|+      +||+||+.|++.||+.||.  +  + +.+++|+.||.+|||+||+||+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            999999999999999999999983      6999999999999999994  2  2 467899999999999999999999


Q ss_pred             cccccchhhhhcChhhHHHHHHhhhChHHHHHHHHHHHHHhhcCCccCCCCCccccccccCC
Q 017040          317 AGVLFSDQTLLTNAKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN  378 (378)
Q Consensus       317 ~glL~SD~~L~~d~~T~~~V~~yA~d~~~Ff~~Fa~AmvKM~~lgvltG~~GEIR~~C~~vN  378 (378)
                      +|||+|||+|++|++|+++|++||.||+.||++|++||+||++|+|+||.+||||++|+++|
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999998
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 378
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-109
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-106
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-104
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-104
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-103
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-102
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 6e-62
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-61
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 9e-59
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-45
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 7e-43
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-42
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 5e-06
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 8e-05
d1u2ka_292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 4e-04
d1itka2308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 8e-04
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 0.002
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 0.004
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 0.004
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  318 bits (817), Expect = e-109
 Identities = 120/302 (39%), Positives = 179/302 (59%), Gaps = 13/302 (4%)

Query: 90  LRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDN 149
           L   +Y  TCP    IV   +  A   DP + A+L+R+HFHDCF++GCDGSVL+++T   
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 150 KAEKDSPGNL-SLRGYEVIDDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPK 208
           ++E+D+  N+ S+RG +V++D K  +E  CP  VSCADI+A+AA  A    GGP + +P 
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 209 GRKDGRRS-KIEDTINLPFPTFNASELIRAFGQRGFTAQEMVVLSGAHTIGVARCSSFKS 267
           GR+D   + +     NLP P FN ++L  +F  +G    ++V LSG HT G ARCS+F +
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 268 RLTGV------DPTLDSDFAKTLSKTC---SAGDNAEQPFDATRNDFDNLYFNALIRKAG 318
           RL         DPTL++ + + L   C   + GDN      +T + FDN Y++ L++  G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 319 VLFSDQTLLTN--AKTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRK 376
           +L SDQ L +   A T   VN ++ NQ  FF +F+ +M+KMG + V  G +GE+R  C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301

Query: 377 IN 378
           +N
Sbjct: 302 VN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.6e-101  Score=748.92  Aligned_cols=290  Identities=40%  Similarity=0.712  Sum_probs=279.6

Q ss_pred             CCCcchhhcCCccHHHHHHHHHHHHHhcCCChhhHHHHHhhcccCccCCCceeeecCCCCCccccCCCCCCC-CchhhhH
Q 017040           89 GLRMDYYIMTCPFGEQIVKNAVDRALDDDPTLAAALVRMHFHDCFIEGCDGSVLIDSTQDNKAEKDSPGNLS-LRGYEVI  167 (378)
Q Consensus        89 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSiLLd~t~~~~~E~~~~~N~~-Lrg~~vI  167 (378)
                      ||+.+||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||++++++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999988889999999985 6899999


Q ss_pred             HHHHHHHHhhCCCCCcHHHHHHHhhhhhhhhcCCCccccCCCCCCCCCCCcccc-CCCCCCCccHHHHHHHHHhCCCChh
Q 017040          168 DDAKNQLEEQCPGVVSCADIIAMAARDAIFWAGGPIYDIPKGRKDGRRSKIEDT-INLPFPTFNASELIRAFGQRGFTAQ  246 (378)
Q Consensus       168 d~iK~~le~~CP~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~-~~LP~p~~~~~~l~~~F~~~Gls~~  246 (378)
                      |.||++||++||++||||||||||||+||+++|||.|+|++||+|+.+++..++ .+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999987766 7899999999999999999999999


Q ss_pred             hhhhhhccccccccccccCCCCCC------CCCCCCCHHHHHHhcccCCCC-C--CCCCCCCCCCCccccHHHHHHhhcc
Q 017040          247 EMVVLSGAHTIGVARCSSFKSRLT------GVDPTLDSDFAKTLSKTCSAG-D--NAEQPFDATRNDFDNLYFNALIRKA  317 (378)
Q Consensus       247 elVaLsGAHTiG~ahc~~f~~Rl~------~~Dp~ld~~f~~~L~~~Cp~g-~--~~~~lD~~TP~~FDN~Yyknl~~~~  317 (378)
                      ||||||||||||++||.+|.+|+|      .+||++|+.|+..|++.||.+ +  +.+.+|+.||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            999999999999999999999998      479999999999999999943 2  5677899999999999999999999


Q ss_pred             ccccchhhhhcCh--hhHHHHHHhhhChHHHHHHHHHHHHHhhcCCccCCCCCccccccccCC
Q 017040          318 GVLFSDQTLLTNA--KTRAAVNGYAMNQAMFFLDFQQAMVKMGMVDVKEGGKGEVRHNCRKIN  378 (378)
Q Consensus       318 glL~SD~~L~~d~--~T~~~V~~yA~d~~~Ff~~Fa~AmvKM~~lgvltG~~GEIR~~C~~vN  378 (378)
                      |+|+|||+|+.||  +|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+++|
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999996  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure