Citrus Sinensis ID: 017050

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MGNKKKRGGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALRRVEYKSKPEDGKC
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHcccccccEEcccccccccccccccccccccEEEEEEcccccccccEEEEEcccccEEcccccccccEEEEEccccccccccccccccccccccccccccEEEEEEEccHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHcHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHccccccHHHHHcccccccccccHHHHHccHHHccccccccccEEEEEEcHHHHHccccHHHHHHHHHHHHHHHHEEEccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHccccccccccccccccccccEEEEEccccccccEEEEccccccEEEccccccccEEEEEEcccccccccccccEcccccccccccEEEEEEEEcccHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEcccccHHHHHHcccccccccHHHHHHEEEEcccccccEEEcHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
mgnkkkrgglepelkeaatgenhesqnelslangdssscdnkkkkkrkrdqlnddapievptvsvavpgsiidntQSLELATRLAGQIARAVTIFRIDEVvvfdnksssdnysrssaanrsnrsdenesGAAFLVRLLQYLETPQYLRKALFSMHSSlrfvgmlppldaphhlrkhewapfregvtlkenapnsvgtLVDVGLNKHVVVDQVLDPGVRVTVAMgtnrnldadsprqvvppskpkesgmywgykvryapnissvfkncsykggydhligtsehgdivnssdltlpTFRHLLIAFGglagleesieeddglkrkNAREVFHSYFntcphqgsrtirTEEAIFISLQYFQEPISRALRRveykskpedgkc
Flexible Loop (DISEMBL)
mgnkkkrgglepelkeaatgenhesqnelslangdssscdnkkkkkrkrdqlnddapievptvsvavpgsiIDNTQSLELATRLAGQIARAVTIFRIDEVvvfdnksssdnysrssaanrsnrsdeneSGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGtnrnldadsprqvvppskpkesgmywGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYfntcphqgsrTIRTEEAIFISLQyfqepisralrrveykskpedgkc
Low Complexity Region (SEG)
MGNKKKRGGLEPELKEAATGENHESQNELSLANGDSSSCDNkkkkkrkrDQLNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKsssdnysrssaanrsnrsdENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALRRVEYKSKPEDGKC
Disordered region (IsUnstruct)
***********************************************************VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFD**************************AAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMG**********************GMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESI*********NAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRAL**************
Disordered Region (DISOPRED)
*************************************************************TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNK**********************SGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDA**************GVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMG*************VPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEE***********NAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRA***************
Disordered Region (DISEMBL)
**********EPEL*************************************LNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDN***********************SGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALRRVE**********
Disordered Region (DISPRO)
*******************************************************APIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKS********************ESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALR*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNKKKRGGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALRRVEYKSKPEDGKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	378	2.2.26 [Sep-21-2011]
Q3UHX9	385	Uncharacterized protein C	yes	no	0.791	0.776	0.465	2e-70
Q5T280	376	Uncharacterized protein C	yes	no	0.783	0.787	0.460	2e-69
Q10950	378	Uncharacterized protein B	yes	no	0.769	0.769	0.334	5e-43
O13641	315	Uncharacterized protein C	yes	no	0.648	0.777	0.295	6e-23
Q06847	283	Uncharacterized protein V	yes	no	0.674	0.901	0.25	1e-14
P20571	281	Uncharacterized protein r	yes	no	0.674	0.907	0.261	3e-14
P53336	341	Uncharacterized protein Y	yes	no	0.507	0.563	0.271	5e-12
Q04867	317	Uncharacterized protein Y	no	no	0.674	0.804	0.241	4e-10

>sp|Q3UHX9|CI114_MOUSE Uncharacterized protein C9orf114 homolog OS=Mus musculus GN=D2Wsu81e PE=2 SV=1

 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 189/307 (61%), Gaps = 8/307 (2%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T+SVA+PGSI+DN QS EL T LAGQIARA TIF +DE+VVFD +         S     
Sbjct: 75  TLSVALPGSILDNAQSPELRTYLAGQIARACTIFCVDEIVVFDEEGQDTK----SVEGEF 130

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
               +       L R+LQYLE PQYLRKA F  H  L+F G+L PLD+PHH+R+ E + F
Sbjct: 131 RGVGKKGQACVQLARILQYLECPQYLRKAFFPKHQDLQFAGILNPLDSPHHMRQDEESEF 190

Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPR-QVVPP 240
           REGV +        G+LV+ G+ K V +D+ LDPG+RVTV +   +  +  + +  VV  
Sbjct: 191 REGVVVDRPTKAGHGSLVNCGMKKEVKIDKKLDPGLRVTVRLNQQQLPECKTYKGTVVSS 250

Query: 241 SKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
             P+ ++G+YWGY VR A  +S+VF    ++ GYD  IGTSE G  V S+   LP+FRH 
Sbjct: 251 QDPRTKAGLYWGYTVRLASCLSAVFAEAPFQDGYDLTIGTSERGSDVASAQ--LPSFRHA 308

Query: 300 LIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP 359
           L+ FGGL GLE +++ D  L+  +   +F  Y NTC  QGSRTIRTEEAI ISL   Q  
Sbjct: 309 LVVFGGLQGLEAAVDADPNLEVADPSVLFDFYVNTCLSQGSRTIRTEEAILISLAALQPG 368

Query: 360 ISRALRR 366
           +++   R
Sbjct: 369 LTQVGSR 375

Mus musculus (taxid: 10090)

>sp|Q5T280|CI114_HUMAN Uncharacterized protein C9orf114 OS=Homo sapiens GN=C9orf114 PE=1 SV=3

 Score =  263 bits (671), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/304 (46%), Positives = 183/304 (60%), Gaps = 8/304 (2%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T+SVA+PGSI+DN QS EL T LAGQIARA  IF +DE+VVFD +               
Sbjct: 74  TLSVALPGSILDNAQSPELRTYLAGQIARACAIFCVDEIVVFDEEGQDAKTVEGEFTGVG 133

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
            +          L R+LQYLE PQYLRKA F  H  L+F G+L PLD+PHH+R+ E + F
Sbjct: 134 KKG----QACVQLARILQYLECPQYLRKAFFPKHQDLQFAGLLNPLDSPHHMRQDEESEF 189

Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPR-QVVPP 240
           REG+ +        G+ V+ G+ K V +D+ L+PG+RVTV +   ++ D  +   +VV  
Sbjct: 190 REGIVVDRPTRPGHGSFVNCGMKKEVKIDKNLEPGLRVTVRLNQQQHPDCKTYHGKVVSS 249

Query: 241 SKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
             P+ ++G+YWGY VR A  +S+VF    ++ GYD  IGTSE G  V S+   LP FRH 
Sbjct: 250 QDPRTKAGLYWGYTVRLASCLSAVFAEAPFQDGYDLTIGTSERGSDVASAQ--LPNFRHA 307

Query: 300 LIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP 359
           L+ FGGL GLE   + D  L+      +F  Y NTCP QGSRTIRTEEAI ISL   Q  
Sbjct: 308 LVVFGGLQGLEAGADADPNLEVAEPSVLFDLYVNTCPGQGSRTIRTEEAILISLAALQPG 367

Query: 360 ISRA 363
           + +A
Sbjct: 368 LIQA 371

Homo sapiens (taxid: 9606)

>sp|Q10950|YMP6_CAEEL Uncharacterized protein B0361.6 OS=Caenorhabditis elegans GN=B0361.6 PE=4 SV=1

 Score =  175 bits (443), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 166/308 (53%), Gaps = 17/308 (5%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T+S+AVPG  ++N QS EL T +AGQIARA T++R+DE++++D      + + ++  N +
Sbjct: 67  TISIAVPGQFLNNAQSAELRTYMAGQIARAATLYRVDEIIIYDESCRMTDEAVNAYYNGT 126

Query: 122 NR-----SDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKH 176
            +     ++ N  G  +L ++L+YLE PQYLRK LF +   L+  G+L PLDA HHL+  
Sbjct: 127 WQGNLIPAETNYEGCFYLAKILEYLECPQYLRKDLFPIQKPLKNAGLLNPLDAQHHLKYD 186

Query: 177 EWA-PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQ---VLDPGVRVTVAMGTNRNLDAD 232
           E    FREGV LK+ + +  G + ++GL K   +D     L P  RVTV +  N      
Sbjct: 187 EKTLRFREGVVLKKRSKDGRGPICNIGLEKEFEIDSDAVQLPPYTRVTVEI-KNLTEQCK 245

Query: 233 SPRQVVP--PSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSD 290
             R  +    +  +E+G+YWGY VR    +  V +       +D + G S  G + +  D
Sbjct: 246 LYRGSITSGATVTRETGLYWGYSVRLMTGLQKVLQ----AKKFDIVAGVSPRGKLASQMD 301

Query: 291 LTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCP-HQGSRTIRTEEAI 349
           + +     +L+ FGG+AG++ ++E ++  + + A + F     T     GSR+ R EE +
Sbjct: 302 VCILNKPKILLVFGGVAGVDAAVESEELAEWRRAEDAFDVLIRTTSLSNGSRSERVEENV 361

Query: 350 FISLQYFQ 357
              L   Q
Sbjct: 362 LSVLAQVQ 369

Caenorhabditis elegans (taxid: 6239)

>sp|O13641|YGWG_SCHPO Uncharacterized protein C8D2.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi049 PE=4 SV=1

 Score =  108 bits (271), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 26/271 (9%)

Query: 48  KRDQLNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKS 107
           K  ++    P    T+S+A+P S ++   +L+L T    +I+R V+++ IDE+++ ++  
Sbjct: 3   KESEIQSLPPTRRYTISLALPISSLNVAYNLQLKTSFVWKISRIVSLYGIDEIILLEDPE 62

Query: 108 SSDNYSRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLP-- 165
              N    + ++ +   D  +    FL  LL Y ETP ++RK LF ++  L++    P  
Sbjct: 63  YVQNTQVHTLSSDAYLKDPTK----FLTDLLCYFETPFFMRKELFPLNPHLKYTSCFPLL 118

Query: 166 PLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVD--QVLDPGVRVTVAM 223
           PL        +   P+REG+    +       +++ GL+ +V+V    VL P  RVTV  
Sbjct: 119 PLRNDKASTVNIEFPYREGIVTHPSPQAKNKYIINAGLSHNVIVSSPSVLAPRTRVTV-- 176

Query: 224 GTNRNLDADSPRQ-------VVPPSKPKES-GMYWGYKVRYAPNISSVFKNCSYKGGYDH 275
                L A SP +       +V  S P+E  G YWGYKVR   + S + K+  YKGGYD 
Sbjct: 177 ----RLKAQSPNEEGQLQGDIVSFSAPREKGGHYWGYKVRSCLS-SQLCKSSPYKGGYDF 231

Query: 276 LIGTSEHGDIVNSSDL--TLP-TFRHLLIAF 303
           ++  +     + S +L  +LP +FRH ++  
Sbjct: 232 VVQINSQTSAITSKELEASLPSSFRHAVLVL 262

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q06847|Y1688_HALSA Uncharacterized protein VNG_1688C OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_1688C PE=4 SV=2

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 129/312 (41%), Gaps = 57/312 (18%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T SV VP S++   +    ATR  G +ARA  +FRID VVVF ++               
Sbjct: 2   TRSVLVPSSLVREAEDKREATRKLGYVARAAAVFRIDRVVVFPDEDG------------- 48

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPP--LDAPHHLRKHEWA 179
               E + G  F+  +L+Y  TP YLRK  F     L + G+LPP  L +          
Sbjct: 49  ----ERQWGGGFVETVLRYAATPPYLRKEAFDTRDELAYAGVLPPLRLSSWTGSDSSGSG 104

Query: 180 PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQ----VLDPGVRVTVAMGTNRNLDADSPR 235
             R+G+  +  +   V   V+ G+   + + +     +  G RVT+ + + R + A    
Sbjct: 105 SLRQGIVTQVGSEGRV--RVNCGMQHPISLHEPPGMAVSEGERVTIRVSSRRPVRAKLVD 162

Query: 236 QVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPT 295
             +P    + +G+                 +   +      I TS HG+ ++ +  +L  
Sbjct: 163 DPLPGFSVERTGL----------------GDALDRSDAGVRIATSRHGEPLSVA--SLGG 204

Query: 296 FRH------LLIAFGG--------LAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSR 341
           +R       + +AFG         L    +++ E       +A   F ++ NT P QGS 
Sbjct: 205 YRERIARDGVTVAFGAPERGLPPMLGVSADAVNESVTDSSADAPARFDAWLNTIPDQGSE 264

Query: 342 TIRTEEAIFISL 353
            +RTEEA+  +L
Sbjct: 265 VVRTEEAVLATL 276

Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (taxid: 64091)

>sp|P20571|Y1612_HALMA Uncharacterized protein rrnAC1612 OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rrnAC1612 PE=4 SV=2

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 55/310 (17%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T SV VP S+    +    ATR  G +ARA  ++R+D + V+ +   +  +         
Sbjct: 2   TTSVLVPSSLAREAEDRREATRKLGYVARAAAVYRVDRLTVYPDPDGAGKW--------- 52

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
                 E G  F+  +L+Y  TP +LRK ++     L +VG+LPPL     +R    +  
Sbjct: 53  ------EDG--FVETVLRYAATPPHLRKEMWGKRDELEYVGVLPPL----RVRSQTGSGS 100

Query: 182 REGVTLKENAPNSVG----TLVDVGLNKHVVV----DQVLDPGVRVTVAMGTNRNLDADS 233
               +L++     VG      V+ G+   + +    D  ++ G RVTV + + R + A  
Sbjct: 101 EGSGSLRQGIVTEVGADGRVRVNCGMQHPISLPVPADMDVEQGERVTVRVSSRRPVRA-- 158

Query: 234 PRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTL 293
            + V  P+         G+ V     +++       +      I +S +G+ V S+ L  
Sbjct: 159 -KLVDAPTT--------GFDV-----VAADLDAALSRDDAGLTIASSRYGEPVTSTRLGQ 204

Query: 294 PTFRH-----LLIAFG----GLAG-LEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTI 343
              R      + +AFG    GL   L+ + +   G +  +  E F  + NT P+QGS  +
Sbjct: 205 LAERRDAEGGMTVAFGAPERGLPSILDVAPDAVGGDQTSDEPEGFDLWLNTVPNQGSEVV 264

Query: 344 RTEEAIFISL 353
           RTEEA+F SL
Sbjct: 265 RTEEALFASL 274

Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (taxid: 272569)

>sp|P53336|YG5X_YEAST Uncharacterized protein YGR283C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR283C PE=1 SV=1

 Score = 72.4 bits (176), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 25/217 (11%)

Query: 55  DAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSR 114
           D    V   S+ +P ++IDN  +LE  T  A QIAR   +F + E++V D        S+
Sbjct: 32  DIESNVVKYSICIPTTVIDNCNNLEQVTFTAYQIARTAVLFNVQEIIVLDQ-------SK 84

Query: 115 SSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSS--LRFVGMLPPLDAPHH 172
                + +RS E  S    L  LLQY  TP  L    F   +   L+     PPL+    
Sbjct: 85  DKKHEKKSRSKETISDCLLLATLLQYFVTPPNLLDTTFKKKNKLYLKCASTFPPLNQLPF 144

Query: 173 LRKHEWAPFREGVTL-----KENAPNSVGTLVDVGLNKHVVV-DQVLDPGVRVTVAMGTN 226
           +       ++EG+++     K  + +++  LV +G N+ + + +Q +    RVTV     
Sbjct: 145 MNASAEQHYKEGLSIARDSSKGKSDDALTNLVYIGKNQIITLSNQNIPNTARVTV----- 199

Query: 227 RNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSV 263
                D+ R+ V        G   GY VR A  ++ V
Sbjct: 200 -----DTERKEVVSPIDAYKGKPLGYHVRMASTLNEV 231

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q04867|YM91_YEAST Uncharacterized protein YMR310C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR310C PE=1 SV=1

 Score = 66.2 bits (160), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 47/302 (15%)

Query: 64  SVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNR 123
           S+ +P +++ + ++L   T    Q+A+  ++F + EVV+ ++ S  D             
Sbjct: 21  SLCIPTTLVSDCRNLSQITHKVYQVAKFASLFNVSEVVILEDNSQVDA------------ 68

Query: 124 SDENESGAAFLVRLLQYLETPQYLRKALFS--MHSSLRFVGMLPPLDAPHHLR--KHEWA 179
           + +  S A  ++ LLQY  TP YLR  +F+      L     LP L      R  K +  
Sbjct: 69  TKKKISTAKLILALLQYFVTPPYLRNTVFNEKFRPYLTAASKLPRLSTLPFTRYQKQDHG 128

Query: 180 PFREGVTLKENAPN----SVGTL------VDVGLNKHVVVDQVLDP-GVRVTVAMGTNRN 228
            +REG+T+K   P      +G +      +++G +K + +   L P   RVT+   T   
Sbjct: 129 RYREGLTIKMQKPTLARKKIGKVFKQTKYINIGKSKALALQSQLVPINARVTIDTIT--- 185

Query: 229 LDADSPRQVVPPSKP--KESGM--YWGYKVRYAPNISSVFKNCSYKGGYDHLIG---TSE 281
                 R++V P +     +G+   +GY  R A + + +F     K GY   +    T+ 
Sbjct: 186 ------RKIVSPQEAYGDFTGLDSQYGYYTRIASSFTDLFMKGPLKEGYTQSVYVPLTTR 239

Query: 282 HGDIVNSSDL-TLPTFRHLLIAFGGLAGLEES--IEEDDGLKRKNAREVFHSYFNTCPHQ 338
              I   S L T  T  H+L+ F     L  +  +++D  +  +  +E F +    CP  
Sbjct: 240 DTSIPELSSLPTAETNPHILLVFSTWDTLARAFKLDQDQFVDCQGPQEFFDAQLP-CPVS 298

Query: 339 GS 340
            S
Sbjct: 299 NS 300

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
255552315	369	Protein C9orf114, putative [Ricinus comm	0.965	0.989	0.719	1e-148
224099761	366	predicted protein [Populus trichocarpa]	0.955	0.986	0.720	1e-146
147790065	363	hypothetical protein VITISV_012192 [Viti	0.947	0.986	0.700	1e-144
225432580	363	PREDICTED: uncharacterized protein C9orf	0.947	0.986	0.697	1e-143
359477498	359	PREDICTED: uncharacterized protein C9orf	0.936	0.986	0.687	1e-140
449432714	367	PREDICTED: uncharacterized protein C9orf	0.933	0.961	0.665	1e-136
449520559	368	PREDICTED: uncharacterized protein C9orf	0.933	0.959	0.664	1e-136
42567956	398	uncharacterized protein [Arabidopsis tha	0.791	0.751	0.749	1e-131
297807989	381	hypothetical protein ARALYDRAFT_909964 [	0.791	0.784	0.749	1e-130
224111238	338	predicted protein [Populus trichocarpa]	0.817	0.914	0.723	1e-129

>gi|255552315|ref|XP_002517202.1| Protein C9orf114, putative [Ricinus communis] gi|223543837|gb|EEF45365.1| Protein C9orf114, putative [Ricinus communis]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/371 (71%), Positives = 312/371 (84%), Gaps = 6/371 (1%)

Query: 1   MGNKKKRGGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPI-- 58
           MG KKKR   E +  E  T ENHE  N++ + NGDS     KKKK+++R++   +     
Sbjct: 1   MGKKKKRAEAEAQ-TETETVENHEPVNDV-VVNGDSDRKKKKKKKEKERNERKKEENESK 58

Query: 59  EVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAA 118
           E  T+S+AVPGSIIDN QSLELATRLAGQIARA TIFRIDEVVVFDN+SSS    R++  
Sbjct: 59  ETATISIAVPGSIIDNAQSLELATRLAGQIARAATIFRIDEVVVFDNESSSVKEDRTTMI 118

Query: 119 NRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEW 178
              N SDENESGAAFL+R+L+YLETPQYLRKALF   +SLRFVG+LPPLDAPHHLRKHEW
Sbjct: 119 T-GNNSDENESGAAFLIRILRYLETPQYLRKALFPRLNSLRFVGLLPPLDAPHHLRKHEW 177

Query: 179 APFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVV 238
           APFREGVTLKE APNS+GTLVDVGL+K+VV+DQV++PG+RVTV MGT+RNLD++ PRQVV
Sbjct: 178 APFREGVTLKEKAPNSIGTLVDVGLSKNVVIDQVVEPGIRVTVEMGTDRNLDSELPRQVV 237

Query: 239 PPSKPKE-SGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFR 297
             SKP+E +GMYWGY+VRYA NIS+VF +C YKGGYDHL+GTSEHG I+N+S L+LPTFR
Sbjct: 238 SLSKPREEAGMYWGYRVRYASNISTVFNDCPYKGGYDHLVGTSEHGQIINASKLSLPTFR 297

Query: 298 HLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ 357
           HLLIAFGGLAGLEESIEED+ LK KN REVF+SY NTCPHQGSRTIRTEEAIFISLQYFQ
Sbjct: 298 HLLIAFGGLAGLEESIEEDNSLKGKNVREVFNSYLNTCPHQGSRTIRTEEAIFISLQYFQ 357

Query: 358 EPISRALRRVE 368
           EPI+RAL+R++
Sbjct: 358 EPINRALQRIQ 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099761|ref|XP_002311607.1| predicted protein [Populus trichocarpa] gi|222851427|gb|EEE88974.1| predicted protein [Populus trichocarpa]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/372 (72%), Positives = 303/372 (81%), Gaps = 11/372 (2%)

Query: 1   MGNKKKRGGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPI-- 58
           MG K+K+   E    +A   EN +++NEL L NGDS     KKK K + +  +D   I  
Sbjct: 1   MGKKQKKAEAE---TDAERVENDKAENELELTNGDSHKKKKKKKNKERNE--SDKEVIKA 55

Query: 59  -EVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSA 117
            E+PTVSVA+ GSII+N QSLELATRLAGQIARA TIFRIDEVVVFDNKS+ +   R+  
Sbjct: 56  KEIPTVSVAISGSIINNAQSLELATRLAGQIARAATIFRIDEVVVFDNKSNYEKEDRTLT 115

Query: 118 ANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHE 177
            +  N SDENESGAAF VR+L+YLETPQYLRKALF  H +LRFVGMLPPLDAPHHLRKHE
Sbjct: 116 TD--NYSDENESGAAFFVRILRYLETPQYLRKALFPKHCNLRFVGMLPPLDAPHHLRKHE 173

Query: 178 WAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQV 237
           WAPFREGVTL E  PNS  TLVDVGL+K+V ++QVL+PG+RVTVAMGTNRNLD+DSPRQV
Sbjct: 174 WAPFREGVTLNEKVPNSGETLVDVGLSKNVSINQVLEPGIRVTVAMGTNRNLDSDSPRQV 233

Query: 238 VPPSKPKE-SGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTF 296
           V   KP+E +GMYWGY+VRYA NISSVFK+C YKGGYDHLIGTSEHG I+NSS+L+LP F
Sbjct: 234 VSLLKPREEAGMYWGYRVRYASNISSVFKDCPYKGGYDHLIGTSEHGLIINSSELSLPAF 293

Query: 297 RHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYF 356
           RHLLIAFGGLAGLEE IEED  LK KN REVF SY NTCPHQGSRTIRTEEAIFISLQYF
Sbjct: 294 RHLLIAFGGLAGLEECIEEDSNLKGKNVREVFDSYLNTCPHQGSRTIRTEEAIFISLQYF 353

Query: 357 QEPISRALRRVE 368
           QEPI+RAL RV+
Sbjct: 354 QEPINRALHRVQ 365

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790065|emb|CAN75987.1| hypothetical protein VITISV_012192 [Vitis vinifera]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/374 (70%), Positives = 300/374 (80%), Gaps = 16/374 (4%)

Query: 1   MGNKKKR-GGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPIE 59
           MG KKKR    E E       EN+ ++NE  L NGDS S   K K  + + Q  D     
Sbjct: 1   MGKKKKRRSDFEAET------ENNTAENETELINGDSRSKKKKNKTHKDKYQATD----- 49

Query: 60  VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAAN 119
           +PT+++AVPGSII N QSLELATRLAGQ+ARA TIFRIDEVVVFD KS+S +   +S   
Sbjct: 50  IPTLTIAVPGSIIHNAQSLELATRLAGQVARAATIFRIDEVVVFDCKSTSGD---NSTVA 106

Query: 120 RSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWA 179
             + SDENE+GAAFL+R+L+YLETPQYLRK LF  H+SL+FVGMLPPLDAPHHLRKHEW 
Sbjct: 107 TPDASDENETGAAFLIRILRYLETPQYLRKILFPKHNSLKFVGMLPPLDAPHHLRKHEWG 166

Query: 180 PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVP 239
           P+REGVTLKE AP+SVGTLVDVGLNK+VV+DQVL+PG+RVTVAMGTNRNLDAD   QVV 
Sbjct: 167 PYREGVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVS 226

Query: 240 PSKPKES-GMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRH 298
            SKP+E  G YWGYKVRYA NISSVFK C +KGGYDHLIGTSEHG IV SS+L +P+FRH
Sbjct: 227 SSKPREEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRH 286

Query: 299 LLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQE 358
           LLIAFGGLAGLEES+EED  LK KN RE+F SY NTCP+QGSRTIRTEEAI ISLQYFQE
Sbjct: 287 LLIAFGGLAGLEESVEEDHSLKGKNVREIFDSYLNTCPNQGSRTIRTEEAILISLQYFQE 346

Query: 359 PISRALRRVEYKSK 372
           PI+RAL+R EY+S+
Sbjct: 347 PINRALQRFEYQSQ 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432580|ref|XP_002277845.1| PREDICTED: uncharacterized protein C9orf114 isoform 1 [Vitis vinifera] gi|297737011|emb|CBI26212.3| unnamed protein product [Vitis vinifera]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/374 (69%), Positives = 299/374 (79%), Gaps = 16/374 (4%)

Query: 1   MGNKKKR-GGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPIE 59
           MG KKKR    E E       EN+ ++NE  L NGDS S   K K  + + Q  D     
Sbjct: 1   MGKKKKRRSDFEAET------ENNTAENETELINGDSRSKKKKNKTHKDKYQATD----- 49

Query: 60  VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAAN 119
           +PT+++AVPGSII N QSLELATRLAGQIARA TIFRIDEVVVFD KS+S +    S   
Sbjct: 50  IPTLTIAVPGSIIHNAQSLELATRLAGQIARAATIFRIDEVVVFDCKSTSGD---DSTVA 106

Query: 120 RSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWA 179
             + SDENE+G AFL+R+L+YLETPQYLRK LF  H+SL+FVGMLPP+DAPHHLRKHEW 
Sbjct: 107 TPDASDENETGPAFLIRILRYLETPQYLRKTLFPKHNSLKFVGMLPPVDAPHHLRKHEWG 166

Query: 180 PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVP 239
           P+REGVTLKE AP+SVGTLVDVGLNK+VV+DQVL+PG+RVTVAMGTNRNLDAD   QVV 
Sbjct: 167 PYREGVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVS 226

Query: 240 PSKPKES-GMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRH 298
            SKP+E  G YWGYKVRYA NISSVFK C +KGGYDHLIGTSEHG IV SS+L +P+FRH
Sbjct: 227 SSKPREEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRH 286

Query: 299 LLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQE 358
           LLIAFGGLAGLEES+EED+ LK KN RE+F SY NTCP+QGSRTIRTEEAI ISLQYFQE
Sbjct: 287 LLIAFGGLAGLEESVEEDNSLKGKNVREIFDSYLNTCPNQGSRTIRTEEAILISLQYFQE 346

Query: 359 PISRALRRVEYKSK 372
           PI+RAL+R EY+S+
Sbjct: 347 PINRALQRFEYRSQ 360

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477498|ref|XP_003631986.1| PREDICTED: uncharacterized protein C9orf114 isoform 2 [Vitis vinifera]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/374 (68%), Positives = 293/374 (78%), Gaps = 20/374 (5%)

Query: 1   MGNKKKR-GGLEPELKEAATGENHESQNELSLANGDSSSCDNKKKKKRKRDQLNDDAPIE 59
           MG KKKR    E E       EN+ ++NE  L NGDS S   K K  + + Q  D     
Sbjct: 1   MGKKKKRRSDFEAET------ENNTAENETELINGDSRSKKKKNKTHKDKYQATD----- 49

Query: 60  VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAAN 119
           +PT+++AVPGSII N QSLELATRLAGQIARA TIFRIDEV +  N S S          
Sbjct: 50  IPTLTIAVPGSIIHNAQSLELATRLAGQIARAATIFRIDEVCIVMNSSRSVEL------- 102

Query: 120 RSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWA 179
             N SDENE+G AFL+R+L+YLETPQYLRK LF  H+SL+FVGMLPP+DAPHHLRKHEW 
Sbjct: 103 LINASDENETGPAFLIRILRYLETPQYLRKTLFPKHNSLKFVGMLPPVDAPHHLRKHEWG 162

Query: 180 PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVP 239
           P+REGVTLKE AP+SVGTLVDVGLNK+VV+DQVL+PG+RVTVAMGTNRNLDAD   QVV 
Sbjct: 163 PYREGVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVS 222

Query: 240 PSKPKES-GMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRH 298
            SKP+E  G YWGYKVRYA NISSVFK C +KGGYDHLIGTSEHG IV SS+L +P+FRH
Sbjct: 223 SSKPREEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRH 282

Query: 299 LLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQE 358
           LLIAFGGLAGLEES+EED+ LK KN RE+F SY NTCP+QGSRTIRTEEAI ISLQYFQE
Sbjct: 283 LLIAFGGLAGLEESVEEDNSLKGKNVREIFDSYLNTCPNQGSRTIRTEEAILISLQYFQE 342

Query: 359 PISRALRRVEYKSK 372
           PI+RAL+R EY+S+
Sbjct: 343 PINRALQRFEYRSQ 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432714|ref|XP_004134144.1| PREDICTED: uncharacterized protein C9orf114 homolog [Cucumis sativus]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/374 (66%), Positives = 292/374 (78%), Gaps = 21/374 (5%)

Query: 1   MGNKKKRGGLEPELK-EAATGENHESQNELSLANGDS--------SSCDNKKKKKRKRDQ 51
           MG KK +    PE + EA   ++ E+ +E  L NG S           +N   +  KR  
Sbjct: 1   MGKKKHK---RPEQESEALDRDDFEANHETELINGCSPEKKKKKKKKVENGSIEAEKRK- 56

Query: 52  LNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDN 111
                PI  PTVS+AV GSIIDN QSLELATRLAGQIARA TIFRI+EVVVFD+  SS  
Sbjct: 57  -----PISKPTVSIAVSGSIIDNAQSLELATRLAGQIARAATIFRINEVVVFDSGRSSTT 111

Query: 112 YSRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPH 171
            S  +AAN S   DE+ESGAAFL+R+L+YLETPQYLRKALF  H++LRFVGMLPPLDAPH
Sbjct: 112 GSEVAAANNS---DEDESGAAFLIRILKYLETPQYLRKALFPKHNNLRFVGMLPPLDAPH 168

Query: 172 HLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDA 231
           HLRKHEW P+REGVTLKE AP++ GT VDVGL+K+VVVD++L+PG RVTVAMGT+RNL +
Sbjct: 169 HLRKHEWGPYREGVTLKERAPDAKGTSVDVGLSKNVVVDEILEPGTRVTVAMGTDRNLFS 228

Query: 232 DSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDL 291
           D PRQVV  SKP E G+YWGY+VRYA ++S+VFK  SY+GGYDHLIGTSEHG ++ SS+L
Sbjct: 229 DLPRQVVSSSKPVEEGLYWGYRVRYASSLSAVFKESSYEGGYDHLIGTSEHGMVIKSSEL 288

Query: 292 TLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFI 351
           TLP FRHLLIAFGGLAGLEESIEED+  K KNA E+F SY NTCP QGSRTIRTEEAIFI
Sbjct: 289 TLPPFRHLLIAFGGLAGLEESIEEDNNFKSKNAHEIFSSYLNTCPLQGSRTIRTEEAIFI 348

Query: 352 SLQYFQEPISRALR 365
           SLQYFQEPI++A++
Sbjct: 349 SLQYFQEPINKAMQ 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520559|ref|XP_004167301.1| PREDICTED: uncharacterized protein C9orf114 homolog [Cucumis sativus]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/375 (66%), Positives = 292/375 (77%), Gaps = 22/375 (5%)

Query: 1   MGNKKKRGGLEPELK-EAATGENHESQNELSLANGDS---------SSCDNKKKKKRKRD 50
           MG KK +    PE + EA   ++ E+ +E  L NG S            +N   +  KR 
Sbjct: 1   MGKKKHK---RPEQESEALDRDDFEANHETELINGCSPEKKKKKKKKKVENGSIEAEKRK 57

Query: 51  QLNDDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSD 110
                 PI  PTVS+AV GSIIDN QSLELATRLAGQIARA TIFRI+EVVVFD+  SS 
Sbjct: 58  ------PISKPTVSIAVSGSIIDNAQSLELATRLAGQIARAATIFRINEVVVFDSGRSST 111

Query: 111 NYSRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAP 170
             S  +AAN S   DE+ESGAAFL+R+L+YLETPQYLRKALF  H++LRFVGMLPPLDAP
Sbjct: 112 TGSEVAAANNS---DEDESGAAFLIRILKYLETPQYLRKALFPKHNNLRFVGMLPPLDAP 168

Query: 171 HHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLD 230
           HHLRKHEW P+REGVTLKE AP++ GT VDVGL+K+VVVD++L+PG RVTVAMGT+RNL 
Sbjct: 169 HHLRKHEWGPYREGVTLKERAPDAKGTSVDVGLSKNVVVDEILEPGTRVTVAMGTDRNLF 228

Query: 231 ADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSD 290
           +D PRQVV  SKP E G+YWGY+VRYA ++S+VFK  SY+GGYDHLIGTSEHG ++ SS+
Sbjct: 229 SDLPRQVVSSSKPVEEGLYWGYRVRYASSLSAVFKESSYEGGYDHLIGTSEHGMVIKSSE 288

Query: 291 LTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIF 350
           LTLP FRHLLIAFGGLAGLEESIEED+  K KNA E+F SY NTCP QGSRTIRTEEAIF
Sbjct: 289 LTLPPFRHLLIAFGGLAGLEESIEEDNNFKSKNAHEIFSSYLNTCPLQGSRTIRTEEAIF 348

Query: 351 ISLQYFQEPISRALR 365
           ISLQYFQEPI++A++
Sbjct: 349 ISLQYFQEPINKAMQ 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567956|ref|NP_197431.2| uncharacterized protein [Arabidopsis thaliana] gi|45825145|gb|AAS77480.1| At5g19300 [Arabidopsis thaliana] gi|110741745|dbj|BAE98818.1| hypothetical protein [Arabidopsis thaliana] gi|332005299|gb|AED92682.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/307 (74%), Positives = 265/307 (86%), Gaps = 8/307 (2%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           TVS+A+ GSII NTQSLELATRLAGQIARA TIFRIDE+VVFDNKSSS+     SAA  +
Sbjct: 99  TVSIAIAGSIIHNTQSLELATRLAGQIARAATIFRIDEIVVFDNKSSSEI---ESAA--T 153

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
           N SD NESGA+FLVR+L+YLETPQYLRK+LF   + LR+VGMLPPLDAPHHLRKHEW  +
Sbjct: 154 NASDSNESGASFLVRILKYLETPQYLRKSLFPKQNDLRYVGMLPPLDAPHHLRKHEWEQY 213

Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPS 241
           REGVTL E APNS GTLVDVGL+K VVVDQVL PG+RVTVAMGT+ +LD    RQ+VPPS
Sbjct: 214 REGVTLSEKAPNSEGTLVDVGLSKSVVVDQVLGPGIRVTVAMGTDHDLDL--VRQIVPPS 271

Query: 242 KPKE-SGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLL 300
           KP+E +GMYWGYKVRYA  +SSVFK C ++GGYD+LIGTSEHG +++SS+L +PTFRHLL
Sbjct: 272 KPREEAGMYWGYKVRYASQLSSVFKECPFEGGYDYLIGTSEHGLVISSSELKIPTFRHLL 331

Query: 301 IAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPI 360
           IAFGGLAGLEESIE+D+  K KN R+VF+ Y NTCPHQGSRTIR EEA+FISLQYFQEPI
Sbjct: 332 IAFGGLAGLEESIEDDNQYKGKNVRDVFNVYLNTCPHQGSRTIRAEEAMFISLQYFQEPI 391

Query: 361 SRALRRV 367
           SRA+RR+
Sbjct: 392 SRAVRRL 398

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807989|ref|XP_002871878.1| hypothetical protein ARALYDRAFT_909964 [Arabidopsis lyrata subsp. lyrata] gi|297317715|gb|EFH48137.1| hypothetical protein ARALYDRAFT_909964 [Arabidopsis lyrata subsp. lyrata]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/307 (74%), Positives = 264/307 (85%), Gaps = 8/307 (2%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           TVS+A+ GSII NTQSLELATRLAGQIARA TIFRIDE+VVFDNKSSS+     SAA   
Sbjct: 82  TVSIAIAGSIIHNTQSLELATRLAGQIARAATIFRIDEIVVFDNKSSSEI---ESAA--M 136

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
           N SD NESGA+FLVR+L+YLETPQYLRK+LF   + LR+VGMLPPLDAPHHLRKHEW  +
Sbjct: 137 NPSDSNESGASFLVRILKYLETPQYLRKSLFPKQNDLRYVGMLPPLDAPHHLRKHEWEQY 196

Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPS 241
           REGVTL E APNS GT+VDVGL+K VVVDQVL PGVRVTVAMGT+ +LD    RQ+VPPS
Sbjct: 197 REGVTLNEKAPNSEGTMVDVGLSKSVVVDQVLSPGVRVTVAMGTDHDLDL--VRQIVPPS 254

Query: 242 KPKE-SGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLL 300
           KP+E +GMYWGYKVRYA  +SSVFK C ++GGYD+LIGTSEHG +++SS+L +PTFRHLL
Sbjct: 255 KPREEAGMYWGYKVRYASQLSSVFKECPFQGGYDYLIGTSEHGVVISSSELKIPTFRHLL 314

Query: 301 IAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPI 360
           IAFGGLAGLEESIE+D+  K KN R+VF+ Y NTCPHQGSRTIR EEA+FISLQYFQEPI
Sbjct: 315 IAFGGLAGLEESIEDDNQYKGKNVRDVFNIYLNTCPHQGSRTIRAEEAMFISLQYFQEPI 374

Query: 361 SRALRRV 367
           SRA+RR+
Sbjct: 375 SRAVRRL 381

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111238|ref|XP_002315789.1| predicted protein [Populus trichocarpa] gi|222864829|gb|EEF01960.1| predicted protein [Populus trichocarpa]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/318 (72%), Positives = 262/318 (82%), Gaps = 9/318 (2%)

Query: 54  DDAPIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEV-VVFDNKSSSDNY 112
           D    E+PTVS+AV GSII+N QSLELATRLAGQIARA TIFRIDEV ++  N  +S + 
Sbjct: 28  DKEAKEIPTVSIAVSGSIINNAQSLELATRLAGQIARAATIFRIDEVSILIFNGFTSSSE 87

Query: 113 SRSSAANRSNRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHH 172
                   +N SDENESG AF +R+L+YLETPQYLRKALF  H++LRFVGMLPPLDAPHH
Sbjct: 88  KEDPTVTTNNNSDENESGGAFFIRILRYLETPQYLRKALFPKHNNLRFVGMLPPLDAPHH 147

Query: 173 LRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDAD 232
           LRKHEWAPFREGVTL E   NS  TLVDVGL+K+VVV+Q L+PG+RVTVAMGTNRNLD D
Sbjct: 148 LRKHEWAPFREGVTLNEKVSNSGETLVDVGLSKNVVVNQALEPGIRVTVAMGTNRNLDDD 207

Query: 233 SPRQVVPPSKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDL 291
           SPRQVV  SKP+ E+G+YWGY+VRYA NISSVFK+C Y+GGYD LIGTSEHG I+NSS+L
Sbjct: 208 SPRQVVSLSKPREEAGLYWGYRVRYASNISSVFKDCPYRGGYDLLIGTSEHGLIINSSEL 267

Query: 292 TLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFI 351
           +LPTFRHLLIAFGGLAGLEESIEED  LK K+ REVF SY NTCPHQGSRTIRTE     
Sbjct: 268 SLPTFRHLLIAFGGLAGLEESIEEDSNLKGKDVREVFDSYLNTCPHQGSRTIRTE----- 322

Query: 352 SLQYFQEPISRALRRVEY 369
              YFQEPISRA++RV++
Sbjct: 323 --VYFQEPISRAMQRVQH 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
TAIR|locus:2150255	398	AT5G19300 "AT5G19300" [Arabido	0.944	0.896	0.631	1.5e-119
ZFIN|ZDB-GENE-040912-53	381	zgc:101748 "zgc:101748" [Danio	0.777	0.771	0.480	5.1e-67
MGI|MGI:106544	385	D2Wsu81e "DNA segment, Chr 2,	0.780	0.766	0.465	1.2e-63
UNIPROTKB|Q5T280	376	C9orf114 "Uncharacterized prot	0.783	0.787	0.460	2.6e-63
FB|FBgn0033473	485	CG12128 [Drosophila melanogast	0.809	0.630	0.421	1.2e-58
RGD|1563514	242	LOC499770 "similar to LOC49580	0.571	0.892	0.459	1.4e-46
GENEDB_PFALCIPARUM|PF14_0307	444	PF14_0307 "hypothetical protei	0.550	0.468	0.415	5.9e-44
UNIPROTKB|Q8ILD7	444	PF14_0307 "Putative uncharacte	0.550	0.468	0.415	5.9e-44
WB|WBGene00015160	378	B0361.6 [Caenorhabditis elegan	0.769	0.769	0.334	6.8e-40
DICTYBASE|DDB_G0286505	467	DDB_G0286505 "DUF171 family pr	0.727	0.588	0.269	4.5e-26

TAIR|locus:2150255 AT5G19300 "AT5G19300" [Arabidopsis thaliana (taxid:3702)]

 Score = 1153 (410.9 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
 Identities = 235/372 (63%), Positives = 278/372 (74%)

Query:     3 NKKKRGG----LEPELKEAATGENHESQNELSLANGDSSSCDNXXXXXXXXDQLNDDAPI 58
             NKKKR      +EPE K +  G++ E + +    N +    +          Q  +   +
Sbjct:    35 NKKKRSHEDTEIEPEQKMSLDGDSKEEKIKKKRKNKNQEE-EPELVTEKTKVQEEEKGNV 93

Query:    59 EV--PTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXX 116
             E    TVS+A+ GSII NTQSLELATRLAGQIARA TIFRIDE+VVFDNK          
Sbjct:    94 EEGRATVSIAIAGSIIHNTQSLELATRLAGQIARAATIFRIDEIVVFDNKSSSEIESAAT 153

Query:   117 XXXXXXXXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKH 176
                       NESGA+FLVR+L+YLETPQYLRK+LF   + LR+VGMLPPLDAPHHLRKH
Sbjct:   154 NASDS-----NESGASFLVRILKYLETPQYLRKSLFPKQNDLRYVGMLPPLDAPHHLRKH 208

Query:   177 EWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQ 236
             EW  +REGVTL E APNS GTLVDVGL+K VVVDQVL PG+RVTVAMGT+ +LD    RQ
Sbjct:   209 EWEQYREGVTLSEKAPNSEGTLVDVGLSKSVVVDQVLGPGIRVTVAMGTDHDLDL--VRQ 266

Query:   237 VVPPSKPKE-SGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPT 295
             +VPPSKP+E +GMYWGYKVRYA  +SSVFK C ++GGYD+LIGTSEHG +++SS+L +PT
Sbjct:   267 IVPPSKPREEAGMYWGYKVRYASQLSSVFKECPFEGGYDYLIGTSEHGLVISSSELKIPT 326

Query:   296 FRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQY 355
             FRHLLIAFGGLAGLEESIE+D+  K KN R+VF+ Y NTCPHQGSRTIR EEA+FISLQY
Sbjct:   327 FRHLLIAFGGLAGLEESIEDDNQYKGKNVRDVFNVYLNTCPHQGSRTIRAEEAMFISLQY 386

Query:   356 FQEPISRALRRV 367
             FQEPISRA+RR+
Sbjct:   387 FQEPISRAVRRL 398

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000741 "karyogamy" evidence=RCA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009561 "megagametogenesis" evidence=RCA

ZFIN|ZDB-GENE-040912-53 zgc:101748 "zgc:101748" [Danio rerio (taxid:7955)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 145/302 (48%), Positives = 185/302 (61%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             TVSVA+PGS++DN QS EL T LAGQIARA  +F +DEVV+FD                 
Sbjct:    77 TVSVALPGSVMDNAQSPELRTYLAGQIARACAVFCVDEVVIFDE----LGEDAKSVEGEF 132

Query:   122 XXXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
                 +       L R+LQYLE PQYLRK  F  H  L+F G+L PLD+PHH+R  E A F
Sbjct:   133 KGVGKKGQSCVQLARILQYLECPQYLRKFFFPKHQDLQFAGLLNPLDSPHHMRIDEEAEF 192

Query:   182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVV-PP 240
             REGV L        G+ V+ G+ K V +D+ L  G+RVTV +  ++N D    + VV  P
Sbjct:   193 REGVVLDRPVKAGKGSFVNCGMRKEVQIDKQLKTGLRVTVQLNESQNKDGRVYKGVVVAP 252

Query:   241 SKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
               P+ E+G+YWGY VR A  +S+VF  C YK GYD  IGTSE G   N+  +TLP FRH+
Sbjct:   253 HIPRTEAGLYWGYSVRLASCLSAVFSECPYKEGYDLTIGTSEKGQ--NTDHVTLPAFRHM 310

Query:   300 LIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP 359
             L+ FGGL GLE S++ D+ L   +   +F  Y NTCP QGSRTIRTEEA+ ISL   ++ 
Sbjct:   311 LVVFGGLQGLEASVDADENLTISDPSVLFDLYLNTCPAQGSRTIRTEEALLISLSGLRQK 370

Query:   360 IS 361
             I+
Sbjct:   371 IA 372

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:106544 D2Wsu81e "DNA segment, Chr 2, Wayne State University 81, expressed" [Mus musculus (taxid:10090)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 141/303 (46%), Positives = 188/303 (62%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             T+SVA+PGSI+DN QS EL T LAGQIARA TIF +DE+VVFD +               
Sbjct:    75 TLSVALPGSILDNAQSPELRTYLAGQIARACTIFCVDEIVVFDEEGQDTKSVEGEFRGVG 134

Query:   122 XXXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
                 +       L R+LQYLE PQYLRKA F  H  L+F G+L PLD+PHH+R+ E + F
Sbjct:   135 ----KKGQACVQLARILQYLECPQYLRKAFFPKHQDLQFAGILNPLDSPHHMRQDEESEF 190

Query:   182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPS 241
             REGV +        G+LV+ G+ K V +D+ LDPG+RVTV +   +  +  + +  V  S
Sbjct:   191 REGVVVDRPTKAGHGSLVNCGMKKEVKIDKKLDPGLRVTVRLNQQQLPECKTYKGTVVSS 250

Query:   242 K-PK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
             + P+ ++G+YWGY VR A  +S+VF    ++ GYD  IGTSE G  V S+ L  P+FRH 
Sbjct:   251 QDPRTKAGLYWGYTVRLASCLSAVFAEAPFQDGYDLTIGTSERGSDVASAQL--PSFRHA 308

Query:   300 LIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP 359
             L+ FGGL GLE +++ D  L+  +   +F  Y NTC  QGSRTIRTEEAI ISL   Q  
Sbjct:   309 LVVFGGLQGLEAAVDADPNLEVADPSVLFDFYVNTCLSQGSRTIRTEEAILISLAALQPG 368

Query:   360 ISR 362
             +++
Sbjct:   369 LTQ 371

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5T280 C9orf114 "Uncharacterized protein C9orf114" [Homo sapiens (taxid:9606)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 140/304 (46%), Positives = 183/304 (60%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             T+SVA+PGSI+DN QS EL T LAGQIARA  IF +DE+VVFD +               
Sbjct:    74 TLSVALPGSILDNAQSPELRTYLAGQIARACAIFCVDEIVVFDEEGQDAKTVEGEFTGVG 133

Query:   122 XXXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
                 +       L R+LQYLE PQYLRKA F  H  L+F G+L PLD+PHH+R+ E + F
Sbjct:   134 ----KKGQACVQLARILQYLECPQYLRKAFFPKHQDLQFAGLLNPLDSPHHMRQDEESEF 189

Query:   182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPR-QVVPP 240
             REG+ +        G+ V+ G+ K V +D+ L+PG+RVTV +   ++ D  +   +VV  
Sbjct:   190 REGIVVDRPTRPGHGSFVNCGMKKEVKIDKNLEPGLRVTVRLNQQQHPDCKTYHGKVVSS 249

Query:   241 SKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
               P+ ++G+YWGY VR A  +S+VF    ++ GYD  IGTSE G  V S+ L  P FRH 
Sbjct:   250 QDPRTKAGLYWGYTVRLASCLSAVFAEAPFQDGYDLTIGTSERGSDVASAQL--PNFRHA 307

Query:   300 LIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP 359
             L+ FGGL GLE   + D  L+      +F  Y NTCP QGSRTIRTEEAI ISL   Q  
Sbjct:   308 LVVFGGLQGLEAGADADPNLEVAEPSVLFDLYVNTCPGQGSRTIRTEEAILISLAALQPG 367

Query:   360 ISRA 363
             + +A
Sbjct:   368 LIQA 371

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0033473 CG12128 [Drosophila melanogaster (taxid:7227)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 131/311 (42%), Positives = 177/311 (56%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             T+S+AVPGSI++N QS EL   +AGQIARA  IFR++EV+VFD+                
Sbjct:    73 TLSIAVPGSILENAQSNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSYEAD 132

Query:   122 XXXXEN---ESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEW 178
                       S +  L R+LQYLE PQYLRK  F +H  L++ G+L PLD PHHLR+   
Sbjct:   133 GEGSSTGTVRSSSLQLARILQYLECPQYLRKYFFPLHKDLKYSGLLNPLDTPHHLRQQSK 192

Query:   179 APFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVV 238
               +REGV   + A     +  +VGL   V+VD+ ++PGVRVTV M             +V
Sbjct:   193 FRYREGVICDKKAKEG-HSYANVGLLNDVLVDKAIEPGVRVTVKMEPQSESCRKQRGTLV 251

Query:   239 PPSKPK-ESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFR 297
              P +P+ E+G+YWGY+VR A ++S +F    Y  GYD  +GTS+ G  V+        F 
Sbjct:   252 SPDEPRRETGVYWGYQVRIAHSMSEIFTKSPYATGYDVTVGTSDRGTNVHEVPNRSYNFN 311

Query:   298 HLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ 357
             H+LI FGGL GLE ++  D+ L   +   +F  Y N  P QGSRTIRTEEA+ I+L   Q
Sbjct:   312 HMLIVFGGLQGLESALANDEKLTVDDPELLFDHYVNVLPRQGSRTIRTEEALLIALAALQ 371

Query:   358 EPISRALRRVE 368
             E +   +  VE
Sbjct:   372 EKLQPQVADVE 382

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1563514 LOC499770 "similar to LOC495800 protein" [Rattus norvegicus (taxid:10116)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 101/220 (45%), Positives = 139/220 (63%)

Query:   145 QYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLN 204
             +YLRKA F  H  L+F G+L PLD+PHH+R+ E + FREGV +        G+LV+ G+ 
Sbjct:    19 RYLRKAFFPKHQDLQFAGILNPLDSPHHMRQDEESEFREGVVVDRPTKAGHGSLVNCGMK 78

Query:   205 KHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSK-PK-ESGMYWGYKVRYAPNISS 262
             K V +D+ LDPG+RVTV +   +  +  + +  V  S+ P+ ++G+YWGY VR A  +S+
Sbjct:    79 KEVKIDKKLDPGLRVTVRLNQQQLPECKTYKGTVVSSQDPRTKAGLYWGYTVRLASCLSA 138

Query:   263 VFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAGLEESIEEDDGLKRK 322
             VF    ++ GYD  IGTSE G  V S+ L  P FRH L+ FGGL GLE  ++ D  L+  
Sbjct:   139 VFAEAPFQDGYDLTIGTSERGSSVASTQL--PNFRHALVVFGGLQGLEAGVDADPNLEVA 196

Query:   323 NAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISR 362
             +   +F  Y NTCP QGSRTIRTEEAI ISL   Q  +++
Sbjct:   197 DPSVLFDFYVNTCPSQGSRTIRTEEAILISLAALQPGLTQ 236

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GENEDB_PFALCIPARUM|PF14_0307 PF14_0307 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 394 (143.8 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 99/238 (41%), Positives = 140/238 (58%)

Query:   138 LQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGT 197
             LQYLETPQYLRK LF + + L+  G++ P+DAPHHLR  EW PFREGV L+++   S G 
Sbjct:   207 LQYLETPQYLRKHLFPITNFLKNSGIMNPVDAPHHLRSDEWLPFREGVVLQKS---SNGI 263

Query:   198 LVDVGLNKHVVVDQV--LDPGVRVTVAMGTN-------RNLDADSPRQVVPPSKPKESGM 248
             +VDVGL  +V+++ V  ++ G RVTV   +N       +N +     +++ PS PK   +
Sbjct:   264 IVDVGLFSNVLIENVNYINIGTRVTVLFQSNSYELFQKKNPNVLFTGKLIHPSVPKLYNL 323

Query:   249 YWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAG 308
             YWGY +    N+S +FK        D+LIGTSE G  ++ S ++    + +LI FG   G
Sbjct:   324 YWGYSIEILKNLSDIFKL-----QVDYLIGTSERGKFIDDSMVSFRDAKSVLIVFGNKDG 378

Query:   309 LEES-IEEDDGLKRK---NAREV---------FHSYFNTCPHQGSRTIRTEEAIFISL 353
             LE+  I+E +  K K     +++         F  + NTCP Q SRTIRTEEAI I+L
Sbjct:   379 LEDLLIKEKEKKKNKVFSPEKKIKVLNKMLKKFDLFINTCPCQTSRTIRTEEAITITL 436

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8ILD7 PF14_0307 "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 394 (143.8 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 99/238 (41%), Positives = 140/238 (58%)

Query:   138 LQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGT 197
             LQYLETPQYLRK LF + + L+  G++ P+DAPHHLR  EW PFREGV L+++   S G 
Sbjct:   207 LQYLETPQYLRKHLFPITNFLKNSGIMNPVDAPHHLRSDEWLPFREGVVLQKS---SNGI 263

Query:   198 LVDVGLNKHVVVDQV--LDPGVRVTVAMGTN-------RNLDADSPRQVVPPSKPKESGM 248
             +VDVGL  +V+++ V  ++ G RVTV   +N       +N +     +++ PS PK   +
Sbjct:   264 IVDVGLFSNVLIENVNYINIGTRVTVLFQSNSYELFQKKNPNVLFTGKLIHPSVPKLYNL 323

Query:   249 YWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLIAFGGLAG 308
             YWGY +    N+S +FK        D+LIGTSE G  ++ S ++    + +LI FG   G
Sbjct:   324 YWGYSIEILKNLSDIFKL-----QVDYLIGTSERGKFIDDSMVSFRDAKSVLIVFGNKDG 378

Query:   309 LEES-IEEDDGLKRK---NAREV---------FHSYFNTCPHQGSRTIRTEEAIFISL 353
             LE+  I+E +  K K     +++         F  + NTCP Q SRTIRTEEAI I+L
Sbjct:   379 LEDLLIKEKEKKKNKVFSPEKKIKVLNKMLKKFDLFINTCPCQTSRTIRTEEAITITL 436

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00015160 B0361.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 103/308 (33%), Positives = 158/308 (51%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             T+S+AVPG  ++N QS EL T +AGQIARA T++R+DE++++D                 
Sbjct:    67 TISIAVPGQFLNNAQSAELRTYMAGQIARAATLYRVDEIIIYDESCRMTDEAVNAYYNGT 126

Query:   122 XX-----XXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKH 176
                       N  G  +L ++L+YLE PQYLRK LF +   L+  G+L PLDA HHL+  
Sbjct:   127 WQGNLIPAETNYEGCFYLAKILEYLECPQYLRKDLFPIQKPLKNAGLLNPLDAQHHLKYD 186

Query:   177 EWA-PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQ---VLDPGVRVTVAMGTNRNLDAD 232
             E    FREGV LK+ + +  G + ++GL K   +D     L P  RVTV +  N      
Sbjct:   187 EKTLRFREGVVLKKRSKDGRGPICNIGLEKEFEIDSDAVQLPPYTRVTVEI-KNLTEQCK 245

Query:   233 SPRQVVPPSKP--KESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSD 290
               R  +       +E+G+YWGY VR    +  V +  + K  +D + G S  G + +  D
Sbjct:   246 LYRGSITSGATVTRETGLYWGYSVRLMTGLQKVLQ--AKK--FDIVAGVSPRGKLASQMD 301

Query:   291 LTLPTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCP-HQGSRTIRTEEAI 349
             + +     +L+ FGG+AG++ ++E ++  + + A + F     T     GSR+ R EE +
Sbjct:   302 VCILNKPKILLVFGGVAGVDAAVESEELAEWRRAEDAFDVLIRTTSLSNGSRSERVEENV 361

Query:   350 FISLQYFQ 357
                L   Q
Sbjct:   362 LSVLAQVQ 369

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

DICTYBASE|DDB_G0286505 DDB_G0286505 "DUF171 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 275 (101.9 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
 Identities = 85/315 (26%), Positives = 154/315 (48%)

Query:    62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXX 121
             TVS+A+P + +   QS E+ T +   I+R VT+ +IDE++VF                  
Sbjct:   161 TVSIAIPSNALSGIQSEEMKTYIIEMISRQVTMNKIDEIIVFKTDDYNEEDS-------- 212

Query:   122 XXXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRF-VGMLPPLDAPHHLRKHEWAP 180
                 + +S    L+++L+Y+ETP YLR  LF+      F V  L  +++    + ++   
Sbjct:   213 ----QQQSDLNLLLKVLEYIETPSYLRDELFNTLEKDYFNVDKLNSINSCQQQQPNDEQL 268

Query:   181 FREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLD-------ADS 233
             +REGV   ++  N   ++V+VGL K V++ + L+PG R+T+ +  + N D        D 
Sbjct:   269 YREGVVTNQHWKNQ--SIVNVGLEKLVLIPKRLNPGTRLTIDIKNSSNGDDDGTGGGGDG 326

Query:   234 PRQ---------VVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKG--GYDHLIGTSEH 282
              R+         ++ PS  K+ G YWG+ +R   +++ V   C Y+    YD++I  S++
Sbjct:   327 NRETNDKYINGKIISPSDIKKEGYYWGHHIRLVDSLAKVASTCQYEDTQNYDYIIMHSQY 386

Query:   283 GDIVNS-SDLTLPT---FRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQ 338
             G+   S +D+ +     + HLL+ F   A    ++  +   K  +   V  ++ NT    
Sbjct:   387 GEQFPSYTDVVINNAKKYNHLLVIFAD-ANASSTVNPE--FKLGSEVLVPDTHINTLVDF 443

Query:   339 GSRTIRTEEAIFISL 353
               + +R EE + I+L
Sbjct:   444 NIKKLRFEETLSITL 458

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_VIII0112	hypothetical protein (366 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_1330112	SubName- Full=Putative uncharacterized protein; (182 aa)			•						0.405
	eugene3.00031704	hypothetical protein (320 aa)			•	•					0.400

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	378
pfam02598	283	pfam02598, Methyltrn_RNA_3, Putative RNA methyltra	1e-116
COG2106	272	COG2106, COG2106, Uncharacterized conserved protei	5e-53

>gnl|CDD|217133 pfam02598, Methyltrn_RNA_3, Putative RNA methyltransferase

 Score =  339 bits (872), Expect = e-116
 Identities = 136/300 (45%), Positives = 190/300 (63%), Gaps = 21/300 (7%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
           T+SVA+P SI+ N QSLE  T  AGQIARA TIFR+DE+V++D+ S     + SS     
Sbjct: 1   TLSVAIPTSILSNAQSLEQKTYKAGQIARAATIFRVDEIVIYDDSSEVQKENNSS----- 55

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHL-RKHEWAP 180
             S +N SGA FL  LLQYLETP YLRK++F +H  L++ G+LPPLDAPHH+ R  E   
Sbjct: 56  --SKKNRSGAKFLATLLQYLETPPYLRKSVFPIHPYLKYAGLLPPLDAPHHMSRSPEEGE 113

Query: 181 FREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPP 240
           +REG+ ++ + P    + V++GL+K V +D ++ PG RVTV + + +        +VV P
Sbjct: 114 YREGLVIRMSKPGGKTSYVNIGLDKPVELDSLVPPGTRVTVRIKSQK-------GKVVSP 166

Query: 241 SKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDL---TLPTFR 297
           ++P   G+YWGYKVR A ++S VFK   +  GYD  IGTS  G  ++ ++L    +  F+
Sbjct: 167 AEPYGEGLYWGYKVRIASSLSDVFKKSPFPEGYDVTIGTSRRGKDISEAELEIKLMENFK 226

Query: 298 HLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ 357
           H+L+ FG   G E     D+ LK +  +E+F  Y NT P+QGSRTIRTEEA+ I+L    
Sbjct: 227 HILLVFG---GWEPLKGSDEILKDQGPKELFDGYLNTPPNQGSRTIRTEEAVLIALSILN 283

This family has a TIM barrel-like fold with a deep C-terminal trefoil knot. The arrangement of its hydrophilic and hydrophobic surfaces are opposite to that of the classic TIM barrel proteins. It is likely to bind RNA, and may function as a methyltransferase. Length = 283

>gnl|CDD|225017 COG2106, COG2106, Uncharacterized conserved protein [Function unknown]

 Score =  176 bits (448), Expect = 5e-53
 Identities = 93/295 (31%), Positives = 140/295 (47%), Gaps = 43/295 (14%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
            +SVA+P S++     L+L T   GQIARA  IFR+DE++++++       ++       
Sbjct: 5   MLSVAIPTSLLSEENDLKLKTYKVGQIARAAAIFRVDEIIIYEDGDDVRRDAK------- 57

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWA-- 179
                      F+  LL+Y ETP YLRK +F +   L++ G+LPPL  P H         
Sbjct: 58  -----------FITTLLEYFETPPYLRKRVFPIKRELKYAGLLPPLRIPSHTVSTSPKEG 106

Query: 180 PFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVP 239
            +REG+ ++       G LVD+G +K   +     PG RVTV     R +   SP +V P
Sbjct: 107 EYREGLVIR---RGKKGNLVDIGKDKLAKLSSPAPPGARVTV-----RIISRSSPLRVEP 158

Query: 240 PSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHL 299
              P     YWGYKVR A +++ + K          +I TS +G  ++  +   P    +
Sbjct: 159 AEPPD----YWGYKVRIAKSLNELLK---GFDLDVVVIATSRYG-PLDVRETEAPLKSKV 210

Query: 300 LIAFGGL-AGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISL 353
            + FGG   G+ E       LK    +  F    N  P QG+ T+RTEEA+  +L
Sbjct: 211 TLVFGGPEKGVLEI------LKVGGVKLEFDIVVNFIPGQGTETVRTEEAVLATL 259

Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	378
PF02598	291	Methyltrn_RNA_3: Putative RNA methyltransferase; I	100.0
KOG3925	371	consensus Uncharacterized conserved protein [Funct	100.0
COG2106	272	Uncharacterized conserved protein [Function unknow	100.0
PRK03958	176	tRNA 2'-O-methylase; Reviewed	91.39

>PF02598 Methyltrn_RNA_3: Putative RNA methyltransferase; InterPro: IPR003750 This entry describes proteins of unknown function

Probab=100.00  E-value=1.8e-101  Score=751.14  Aligned_cols=285  Identities=52%  Similarity=0.929  Sum_probs=183.6

Q ss_pred             eEEEEecCccccCCCCHHHHHHHHHHHHHHHhhhcccEEEEEcCCCCCCccccccccccCCCCCCCcchHHHHHHHHhhh
Q 017050           62 TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQYL  141 (378)
Q Consensus        62 tvSIAIP~SIlsnaqslelkT~~agqIARAaaIF~VdEIVVydd~~~~~~~~~~~~~~~~~~~~~~~~~~~fLa~lLqYl  141 (378)
                      |||||||+|||+||||+|+|||+|||||||||||||||||||||+........    ..........+++.||++|||||
T Consensus         1 tvSIaIP~Sil~n~~s~e~~T~~~gqIARaaaiF~VdEIvVydd~~~~~~~~~----~~~~~~~~~~~~~~~l~~lLqYl   76 (291)
T PF02598_consen    1 TVSIAIPGSILSNAQSLELKTYKAGQIARAAAIFRVDEIVVYDDSPKVQNNQD----GENEKGKSNRDDAEFLARLLQYL   76 (291)
T ss_dssp             -EEEEEETTTTTT---HHHHHHHHHHHHHHHHHTT--EEEEEE---------------------SSS--HHHHHHHHHHH
T ss_pred             CEEEEechHHhccCCCHHHHHHHHHHHHHHHHeecCcEEEEEccccccccccc----cccccccCCCCHHHHHHHHHHHh
Confidence            79999999999999999999999999999999999999999999532222110    11112334567899999999999


Q ss_pred             cCChhhhhhhcCCCCCccccccCCCCCCCCcC-CCCCcCCceeEEEeeccCCCCCceEEEeCCCceeeecc-cCCCCcEE
Q 017050          142 ETPQYLRKALFSMHSSLRFVGMLPPLDAPHHL-RKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQ-VLDPGVRV  219 (378)
Q Consensus       142 eTPpYLRK~LFP~h~~Lk~aGlLPPL~~PhH~-r~~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~~-~l~~g~RV  219 (378)
                      ||||||||+|||+|++|||||+||||++|||+ +.++|++||||||+++..+.++++|||||+.+++.++. .+++|+||
T Consensus        77 eTPpYLRK~lFp~~~~Lk~aGlLppL~~phH~~~~~~~~~yREGvv~~~~~~~~~~~~VdiGl~~~v~i~~~~l~~g~RV  156 (291)
T PF02598_consen   77 ETPPYLRKRLFPIHPDLKYAGLLPPLDAPHHMSRSDEWGPYREGVVVRKPSKGGKGSYVDIGLDKPVEIDKQELPPGTRV  156 (291)
T ss_dssp             HS-HHHHHHHS---GGGCCGGGS-----TTS--SS--TT-EEEEEEEEE-SSS---EEEESSSSEEEESSS----SS-EE
T ss_pred             cCCHHHHHhhcccCcccccccccCCCCCCccccCCccccceeEEEEEeCCCCCCceEEEEeCCCcEEeecccccCCCCEE
Confidence            99999999999999999999999999999999 88999999999999998766677999999999999999 99999999


Q ss_pred             EEEecCCCCCCCCCCceecCCCCCCCCCcccceEEEEeCChHHHHhcCCCCCCCcEEEEeCCCCCccCCCCCCCC--CCC
Q 017050          220 TVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLP--TFR  297 (378)
Q Consensus       220 TV~l~~~~~~~~~~~~~vVsp~~p~~~G~YWGY~VR~a~sLs~vf~e~p~~~gYD~~IgTS~~G~~i~~~~~~lp--~~~  297 (378)
                      ||+|+.       ..|++|+|.+|...|+||||+||+|+||++||++|||++|||++||||++|.++++.....+  +++
T Consensus       157 TV~~~~-------~~~~vVsp~~p~~~g~YwGY~VR~a~sl~~v~~~~~~~~GYd~~IgtS~~G~~~~~~~~~~~~~~~~  229 (291)
T PF02598_consen  157 TVRIKS-------LKGKVVSPSEPREAGYYWGYSVRIASSLSEVFTECPYPEGYDLIIGTSERGEPISSSELEIKSSSFK  229 (291)
T ss_dssp             EEEEEE-------SSS-EEEE---SS--S----EEEEECEHHHHHHHC------SEEEEE-TTS-BTTTSHHHHHHHT-S
T ss_pred             EEEecC-------CcCCEeCcccCCcCCccCCeEEEEeCCHHHHHhcCCcccccceEEEECCCCeeCchhhcccccCCCC
Confidence            999984       36899999999339999999999999999999999999999999999999999987655544  899


Q ss_pred             cEEEEEcCccchhhhhhcccc--cccccccccCceEEecCCCCCccccchhHHHHHHHhhcc
Q 017050          298 HLLIAFGGLAGLEESIEEDDG--LKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ  357 (378)
Q Consensus       298 h~LIVFGg~~GLe~~~~~d~~--l~~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~  357 (378)
                      |+|||||||.+++.+++.++.  ..+.++.++||+||||||+||||||||||||+||||.||
T Consensus       230 ~~LiVFGg~~~~~~~~~~~~~~~~~~~~~~~~fD~~lN~~p~QgsrtIRtEEAv~itLa~Ln  291 (291)
T PF02598_consen  230 HLLIVFGGWSPLEGADEIDEKLFEGGEDAEELFDHWLNTCPGQGSRTIRTEEAVLITLAILN  291 (291)
T ss_dssp             EEEEE-----SSS---S----------------SEEEBSSTT-SSS---HHHHHHHHHHHHH
T ss_pred             cEEEEEecCHHHhhccccccccccccccccccCCceEecCCCCCCCccCHHHHHHHHHHhcC
Confidence            999999999999999998874  356789999999999999999999999999999999986

; PDB: 1K3R_B.

>KOG3925 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.1e-93  Score=700.45  Aligned_cols=304  Identities=45%  Similarity=0.789  Sum_probs=281.1

Q ss_pred             CCCcceEEEEecCccccCCCCHHHHHHHHHHHHHHHhhhcccEEEEEcCCCCCCccccccccccCCCCCCCcchHHHHHH
Q 017050           57 PIEVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVR  136 (378)
Q Consensus        57 ~~r~~tvSIAIP~SIlsnaqslelkT~~agqIARAaaIF~VdEIVVydd~~~~~~~~~~~~~~~~~~~~~~~~~~~fLa~  136 (378)
                      .++.+|+|||||+|||+||||+||+||+||||||||++|+|||||||||.....+.++.     .....+..++|.||++
T Consensus        64 ~~~~~t~SIaiPgsil~n~~nlel~T~~a~QIAR~aslf~V~Eiivldd~~~~~~~~~~-----~~~~~~~~s~~~~L~~  138 (371)
T KOG3925|consen   64 ESRPYTYSIAIPGSILNNAQNLELATYFAGQIARAASLFRVDEIIVLDDSEYVTNEQVN-----TSSDKENISGCKLLAR  138 (371)
T ss_pred             CCCceEEEEEechHHHhhhhhhHHHHHHhhhhhhhheeecceeEEEecccchhhhhhhc-----ccccccccccHHHHHH
Confidence            67999999999999999999999999999999999999999999999997765554321     1123567889999999


Q ss_pred             HHhhhcCChhhhhhhcCCCCCccccccCCCCCCCCcCCCCCcCCceeEEEeeccCCCCCceEEEeCCCceeeec-ccCC-
Q 017050          137 LLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVD-QVLD-  214 (378)
Q Consensus       137 lLqYleTPpYLRK~LFP~h~~Lk~aGlLPPL~~PhH~r~~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~-~~l~-  214 (378)
                      |||||||||||||+|||+|++|||||+|||||+|||++.+++++||||||+++.+++|.+++||||+.+.+.|+ ..+. 
T Consensus       139 lLqYfetPqyLRk~~Fp~~~~Lk~ag~lppLd~~hh~~q~e~~~YREGvvi~~~~~~g~~~~in~gL~k~v~I~~~~v~~  218 (371)
T KOG3925|consen  139 LLQYFETPQYLRKTLFPKHPDLKYAGLLPPLDTPHHLRQDEKFRYREGVVIKRKSPAGHGYIINAGLKKEVYIDSKAVEA  218 (371)
T ss_pred             HHhhccCcHHHHHhhccCCccccccccCCCCCchHHhhhhhhhccccceeeccCCCCCCcceecccceeeEEecchhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998 5566 


Q ss_pred             CCcEEEEEecCCCCCCCCCCceecCCCCC-CCCCcccceEEEEeCChHHHHhcCCCCCCCcEEEEeCCCCCccCCCCCCC
Q 017050          215 PGVRVTVAMGTNRNLDADSPRQVVPPSKP-KESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTL  293 (378)
Q Consensus       215 ~g~RVTV~l~~~~~~~~~~~~~vVsp~~p-~~~G~YWGY~VR~a~sLs~vf~e~p~~~gYD~~IgTS~~G~~i~~~~~~l  293 (378)
                      ||+||||+|+...+.+..+.|+||||++| +++|+||||+||+|++|++||++|||++|||++||||.+|..|.+.++..
T Consensus       219 p~~RvtV~l~aq~~~~~t~~g~IVSp~~pr~~tGlywGY~VR~assls~vf~~~P~~~GYD~~vg~s~rg~~I~s~~~~~  298 (371)
T KOG3925|consen  219 PGTRVTVRLNAQTVTCDTLRGKIVSPQDPREETGLYWGYKVRLASSLSEVFSESPFKGGYDFVVGTSTRGSAIASLSLEA  298 (371)
T ss_pred             CcceEEEecCCcCchhhhhcccccCCCCcccccCcccceeeehhhhHHHHhhcCCccCCcceEEEeccCCcccccccccc
Confidence            99999999985545566778999999999 99999999999999999999999999999999999999999999877777


Q ss_pred             CCCCcEEEEEcCccchhhhhhcccccccccccccCceEEecCCCCCccccchhHHHHHHHhhcchhHHHhhh
Q 017050          294 PTFRHLLIAFGGLAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPISRALR  365 (378)
Q Consensus       294 p~~~h~LIVFGg~~GLe~~~~~d~~l~~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~~~~~~~~~  365 (378)
                      +.+.|+|+|||||+||+.+++.|+.....++..+||.++|++|.||+||||+||+|+++|+.++.+|.+...
T Consensus       299 ~t~~~iLlvfg~l~~l~~a~e~~~~~~~~~~~~~f~~~~~~lp~pgs~~~~~ee~~~~slp~~~~~L~~~~r  370 (371)
T KOG3925|consen  299 ETPPHILLVFGGLAGLVRAFELDEQTTWRDSEDPFDVFFNQLPIPGSRTIRSEEAVLDSLPRLQTMLSTHVR  370 (371)
T ss_pred             CCCCcEEEEeechhhHHHHHHhccchhccccCCchhhhhccCCCcccccccchhhhhhhhhhhhhhhhhhhc
Confidence            889999999999999999999998878888999999999999999999999999999999999999987654

>COG2106 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-68  Score=510.88  Aligned_cols=263  Identities=34%  Similarity=0.604  Sum_probs=225.4

Q ss_pred             CcceEEEEecCccccCCCCHHHHHHHHHHHHHHHhhhcccEEEEEcCCCCCCccccccccccCCCCCCCcchHHHHHHHH
Q 017050           59 EVPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLL  138 (378)
Q Consensus        59 r~~tvSIAIP~SIlsnaqslelkT~~agqIARAaaIF~VdEIVVydd~~~~~~~~~~~~~~~~~~~~~~~~~~~fLa~lL  138 (378)
                      |..++|||||+|++++|.|++++||++||||||||||||||||||+|+....                  .++.||..||
T Consensus         2 ~~~~~Sv~iP~Sll~~~~dl~~kT~Kvg~IARaaaiF~V~eIii~~D~~~~~------------------~~~~~i~~lL   63 (272)
T COG2106           2 RRVMLSVAIPTSLLSEENDLKLKTYKVGQIARAAAIFRVDEIIIYEDGDDVR------------------RDAKFITTLL   63 (272)
T ss_pred             ceeEEEEEcchHHhhccCCHHHhHHHHHHHHHHHHhhcccEEEEEeCCCCcc------------------chhHHHHHHH
Confidence            6789999999999999999999999999999999999999999999985432                  2579999999


Q ss_pred             hhhcCChhhhhhhcCCCCCccccccCCCCCCCCcCCC--CCcCCceeEEEeeccCCCCCceEEEeCCCceeeecccCCCC
Q 017050          139 QYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRK--HEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPG  216 (378)
Q Consensus       139 qYleTPpYLRK~LFP~h~~Lk~aGlLPPL~~PhH~r~--~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~~~l~~g  216 (378)
                      |||+|||||||++||++++|||||+||||.+|||+..  +..++||||+|+++.   +++.+||||+++.+.+...+++|
T Consensus        64 ~Y~~TPpyLRK~vFp~~~~LkyAg~lPPL~ip~h~~~~~~~~Ge~ReG~v~~~~---~~~~~v~iG~~~~~~l~~~~~~~  140 (272)
T COG2106          64 EYFETPPYLRKRVFPIKRELKYAGLLPPLRIPSHTVSTSPKEGEYREGLVIRRG---KKGNLVDIGKDKLAKLSSPAPPG  140 (272)
T ss_pred             HHhcCCHHHHhhhcCCCcccccccccCCCCCCCccCcCCccceeecceEEEEec---CCceEEEecCCcceeccCCCCCC
Confidence            9999999999999999999999999999999999976  679999999999985   67799999999999999999999


Q ss_pred             cEEEEEecCCCCCCCCCCceecCCCCCCCCCcccceEEEEeCChHHHHhcCCCCCCCcEEEEeCCCCCccCCCCCCCCCC
Q 017050          217 VRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTF  296 (378)
Q Consensus       217 ~RVTV~l~~~~~~~~~~~~~vVsp~~p~~~G~YWGY~VR~a~sLs~vf~e~p~~~gYD~~IgTS~~G~~i~~~~~~lp~~  296 (378)
                      .||||++.+..      ....|.|.+|.  + ||||+||.+++|.++++..   +.++.+|+||++| +.+..+...+..
T Consensus       141 ~RvTvri~~~~------~p~~~~~~~~~--~-YwGY~V~~~~~L~e~~~~~---~~~~vvi~tsr~g-~~~~~e~~~~~~  207 (272)
T COG2106         141 ARVTVRIISRS------SPLRVEPAEPP--D-YWGYKVRIAKSLNELLKGF---DLDVVVIATSRYG-PLDVRETEAPLK  207 (272)
T ss_pred             ceEEEEEEecc------CceeeecCCCC--C-cCcEEEEehhhHHHHhhcc---CCCceEEEecccC-cceeeecccccC
Confidence            99999998441      12334444442  2 9999999999999998854   3445789999999 555555555556


Q ss_pred             CcEEEEEcCc-cchhhhhhcccccccccccccCceEEecCCCCCccccchhHHHHHHHhhcchhHH
Q 017050          297 RHLLIAFGGL-AGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPIS  361 (378)
Q Consensus       297 ~h~LIVFGg~-~GLe~~~~~d~~l~~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~~~~~  361 (378)
                      ..+.+|||+| .||-++...      .+....||.|+|++|+||+.||||||||+++|+.|+-.+.
T Consensus       208 ~~~~~~fg~P~~gv~~~~~~------~~~~~~~d~~~N~~p~Qg~~~vrtEEavlatl~~ln~~~~  267 (272)
T COG2106         208 SKVTLVFGGPEKGVLEILKV------GGVKLEFDIVVNFIPGQGTETVRTEEAVLATLSILNILLT  267 (272)
T ss_pred             CcceEEecCcccChheeccc------ccCccccceeEEecCCcccccccchhhHHHHHHHHHHHHH
Confidence            6899999999 777766552      1334679999999999999999999999999999986553

>PRK03958 tRNA 2'-O-methylase; Reviewed

Probab=91.39  E-value=0.25  Score=45.93  Aligned_cols=90  Identities=18%  Similarity=0.195  Sum_probs=52.3

Q ss_pred             cccc--eEEEEeCChHHHHhcCCCCCC-CcEEEEeCCCCCccCCCCCCC----CCCCcEEEEEcCccchhhhhhcccccc
Q 017050          248 MYWG--YKVRYAPNISSVFKNCSYKGG-YDHLIGTSEHGDIVNSSDLTL----PTFRHLLIAFGGLAGLEESIEEDDGLK  320 (378)
Q Consensus       248 ~YWG--Y~VR~a~sLs~vf~e~p~~~g-YD~~IgTS~~G~~i~~~~~~l----p~~~h~LIVFGg~~GLe~~~~~d~~l~  320 (378)
                      -|||  |.|++..|+.+++.+.. .+| -=.++.|+.+-.+   ...++    ...+.+||||||| |+..-        
T Consensus        52 ~~WGg~fnv~~~~s~~~~i~~~k-~~G~vvhLtmyga~~~~---~~~~ir~~~~~~~p~LIvvGg~-gvp~e--------  118 (176)
T PRK03958         52 ERWGGPFEVEVTKSWKKEIREWK-DGGIVVHLTMYGENIQD---VEPEIREAHRKGEPLLIVVGAE-KVPRE--------  118 (176)
T ss_pred             HhcCCceEEEEcCCHHHHHHHHH-hCCcEEEEEEecCCccc---hHHHHHHhhccCCcEEEEEcCC-CCCHH--------
Confidence            5897  77999999999999876 333 3355667655333   21122    1256799999987 33222        


Q ss_pred             cccccccCceEEecCCCCCccccchhHHHHHHHhhcc
Q 017050          321 RKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ  357 (378)
Q Consensus       321 ~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~  357 (378)
                         ..+++|+.| -+-+|-- ++|  =|+.|.|-.|.
T Consensus       119 ---vye~aDynl-gvg~qpH-Svr--AAlAI~LDRL~  148 (176)
T PRK03958        119 ---VYELADWNV-AVGNQPH-SEV--AALAVFLDRLF  148 (176)
T ss_pred             ---HHhhCCEEe-ccCCCCh-HHH--HHHHHHHHHhc
Confidence               225567665 2233432 333  35555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	378
1k3r_A	268	Crystal Structure Of The Methyltransferase With A K		4e-21

>pdb|1K3R|A Chain A, Crystal Structure Of The Methyltransferase With A Knot From Methanobacterium Thermoautotrophicum Length = 268

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 56/301 (18%)
Query: 63  VSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKXXXXXXXXXXXXXXXX 122
           +S+ +P S+   T  L++ T     IARA +IF +  +V++ +                 
Sbjct: 6   LSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHD----------------- 48
Query: 123 XXXENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHH-LRKHEWAPF 181
              + +  A F+  +L Y++TPQYLR+ +F +   L+ VG+LPPL  PHH   K     +
Sbjct: 49  ---DADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEY 105
Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPS 241
           R+G+T+K       GTLVD+G +K  +  +      ++TV    +  +       ++ P 
Sbjct: 106 RQGLTVKRVKK---GTLVDIGADKLALCRE------KLTVNRIMSFRVVRLGKEILIEPD 156
Query: 242 KPKESGMYWGYKV-RYAPNISSVFKNCSYKGGYDHLIGTSEHG----DIVNSSDLTLPTF 296
           +P++   YWGY+V     N++   K      G D ++ TS +      I++     +   
Sbjct: 157 EPEDR--YWGYEVLDTRRNLAESLKTV----GADVVVATSRNASPITSILDEVKTRMRGA 210
Query: 297 RHLLIAFGG-LAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQY 355
           R   I FGG   GL E I+ D              + NT P Q + T+RTEEA+  +L  
Sbjct: 211 REAAILFGGPYKGLPE-IDAD-------------IWVNTLPGQCTETVRTEEAVLATLSV 256
Query: 356 F 356
           F
Sbjct: 257 F 257

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	378
1k3r_A	268	Conserved protein MT0001; beta barrel, structural	1e-100
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1k3r_A Conserved protein MT0001; beta barrel, structural genomics, PSI; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.40.4.10 c.116.1.2 Length = 268

 Score =  297 bits (763), Expect = e-100
 Identities = 79/302 (26%), Positives = 127/302 (42%), Gaps = 54/302 (17%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
            +S+ +P S+   T  L++ T     IARA +IF +  +V++                  
Sbjct: 5   DLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYH----------------- 47

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEW-AP 180
              D+ +  A F+  +L Y++TPQYLR+ +F +   L+ VG+LPPL  PHH         
Sbjct: 48  ---DDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGE 104

Query: 181 FREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPP 240
           +R+G+T+K       GTLVD+G +K  +  + L     ++  +             ++ P
Sbjct: 105 YRQGLTVKRVKK---GTLVDIGADKLALCREKLTVNRIMSFRVVR------LGKEILIEP 155

Query: 241 SKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSS----DLTLPTF 296
            +P     YWGY+V    +            G D ++ TS +   + S        +   
Sbjct: 156 DEP--EDRYWGYEVL---DTRRNLAESLKTVGADVVVATSRNASPITSILDEVKTRMRGA 210

Query: 297 RHLLIAFGG-LAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQY 355
           R   I FGG   GL E                   + NT P Q + T+RTEEA+  +L  
Sbjct: 211 REAAILFGGPYKGLPE--------------IDADIWVNTLPGQCTETVRTEEAVLATLSV 256

Query: 356 FQ 357
           F 
Sbjct: 257 FN 258

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 59/380 (15%), Positives = 107/380 (28%), Gaps = 82/380 (21%)

Query: 27  NELSLANGDSSSCDNKKKKKRKRDQLND--DAPIEVPTVSVAVPGSII----DNTQSLEL 80
            E      D  S   +       D   D  D P  +  +S      II      + +L L
Sbjct: 12  GEHQYQYKDILS-VFEDAFVDNFD-CKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTLRL 67

Query: 81  ATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQY 140
              L  +    V  F ++EV+         NY                    FL+  ++ 
Sbjct: 68  FWTLLSKQEEMVQKF-VEEVL-------RINYK-------------------FLMSPIKT 100

Query: 141 -LETPQYLRKALFSMHSSLRFVGMLPPLDAPHHL-RKHEWAPFREGVTLKENAPNSVGTL 198
               P  + +        L        + A +++ R   +   R+   L E  P     L
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYND---NQVFAKYNVSRLQPYLKLRQA--LLELRPAK-NVL 154

Query: 199 VD--VGLNKHVVVDQVL-DPGVRVT-------VAMGTNRNLDADSP-------RQVVPPS 241
           +D  +G  K  V   V     V+         + +  N N              Q+ P  
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK-NCNSPETVLEMLQKLLYQIDPNW 213

Query: 242 KPKESGMYWGYKVRY---APNISSVFKNCSYKGGY---DHLIGTSEHGDIVNSSDL---T 292
             +        K+R       +  + K+  Y+       ++    ++    N+ +L    
Sbjct: 214 TSRSDHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNV----QNAKAWNAFNLSCKI 268

Query: 293 LPTFRHLLIAF--GGLAGLEESIEE-DDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAI 349
           L T R   +            S++     L     + +   Y +  P    R + T    
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 350 FISLQYFQEPISRALRRVEY 369
            +S+    E I   L   + 
Sbjct: 329 RLSI--IAESIRDGLATWDN 346

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	378
1k3r_A	268	Conserved protein MT0001; beta barrel, structural	100.0

>1k3r_A Conserved protein MT0001; beta barrel, structural genomics, PSI; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.40.4.10 c.116.1.2

Probab=100.00  E-value=3.8e-92  Score=676.37  Aligned_cols=248  Identities=31%  Similarity=0.517  Sum_probs=226.0

Q ss_pred             cceEEEEecCccccCCCCHHHHHHHHHHHHHHHhhhcccEEEEEcCCCCCCccccccccccCCCCCCCcchHHHHHHHHh
Q 017050           60 VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQ  139 (378)
Q Consensus        60 ~~tvSIAIP~SIlsnaqslelkT~~agqIARAaaIF~VdEIVVydd~~~~~~~~~~~~~~~~~~~~~~~~~~~fLa~lLq  139 (378)
                      ++|+|||||+||++||||+|+|||+|||||||||||||||||||||+.                    .+++.||++|||
T Consensus         3 ~~t~SIaIP~Sil~~a~s~e~kT~~~gqIARAaaIF~VdEIvVy~d~~--------------------~~~~~~l~~iL~   62 (268)
T 1k3r_A            3 RVDLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHDDA--------------------DGEARFIRDILT   62 (268)
T ss_dssp             SCEEEEEEETTTTTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEECSS--------------------CCCHHHHHHHHH
T ss_pred             eeEEEEEechHHhccCCCHHHHHHHHHHHHHHHHhccccEEEEEeCCC--------------------CCHHHHHHHHHH
Confidence            389999999999999999999999999999999999999999999863                    124789999999


Q ss_pred             hhcCChhhhhhhcCCCCCccccccCCCCCCCCcCCC-CCcCCceeEEEeeccCCCCCceEEEeCCCceeeecccCC--CC
Q 017050          140 YLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRK-HEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLD--PG  216 (378)
Q Consensus       140 YleTPpYLRK~LFP~h~~Lk~aGlLPPL~~PhH~r~-~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~~~l~--~g  216 (378)
                      ||||||||||+|||+|++|||||+||||++|||++. ++|++||||||+++.   ++++|||||+.+++.++  +|  +|
T Consensus        63 YleTPpYLRK~lFp~~~~Lk~aGlLPpL~~phH~~~~~~~~~yREGvv~~~~---~~~~~VdiGl~~~v~~~--~p~~~g  137 (268)
T 1k3r_A           63 YMDTPQYLRRKVFPIMRELKHVGILPPLRTPHHPTGKPVTGEYRQGLTVKRV---KKGTLVDIGADKLALCR--EKLTVN  137 (268)
T ss_dssp             HHHSCHHHHHHHCCCCGGGGGGGGCCCCCCTTSCCSSCCTTCEEEEEEEEEC---SSSEEEESSSSCEEECS--SCCCSS
T ss_pred             HhcCChhHhHhhCCCCcCcceecCcCCCCCCCCCCCCCCccceEEEEEEEec---CCceEEEeCCCceEEEe--cCCCCC
Confidence            999999999999999999999999999999999987 889999999999984   56799999999999998  88  99


Q ss_pred             cEEEEEecCCCCCCCCCCceecCCCCCCCCCcccceEEEEe--CChHHHHhcCCCCCCCcEEEEeCCCCCccCCCCCC-C
Q 017050          217 VRVTVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYA--PNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLT-L  293 (378)
Q Consensus       217 ~RVTV~l~~~~~~~~~~~~~vVsp~~p~~~G~YWGY~VR~a--~sLs~vf~e~p~~~gYD~~IgTS~~G~~i~~~~~~-l  293 (378)
                      +||||+|++..   +.+.+++|+|+     |+||||+||+|  + |+++|++|    |||++||||++|.++. ..+. +
T Consensus       138 ~RVTV~~~~~~---~~~~~~~V~p~-----~~YwGY~Vr~~~~~-l~~v~~~~----gyd~~I~TS~~G~~~~-~~l~~~  203 (268)
T 1k3r_A          138 RIMSFRVVRLG---KEILIEPDEPE-----DRYWGYEVLDTRRN-LAESLKTV----GADVVVATSRNASPIT-SILDEV  203 (268)
T ss_dssp             CEEEEEEEECS---SSCEEEECCCS-----SSCCCCEEEEEEEE-HHHHHHHH----CCSEEEEECTTSCBTT-TSHHHH
T ss_pred             cEEEEEecCCC---ccceeEEcCCC-----CCccCeEEEEehhh-HHHHHhhc----CCCeEEEECCCCCCch-hccchh
Confidence            99999998542   34578999987     78999999999  9 99999998    8999999999999886 3221 2


Q ss_pred             ----CCCCcEEEEEcCc-cchhhhhhcccccccccccccCceEEecCCCCCccccchhHHHHHHHhhcchhH
Q 017050          294 ----PTFRHLLIAFGGL-AGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEPI  360 (378)
Q Consensus       294 ----p~~~h~LIVFGg~-~GLe~~~~~d~~l~~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~~~~  360 (378)
                          .+++|+||||||| +||+++              +||+||||||+||||||||||||+||||.|+..+
T Consensus       204 ~~~~~~~~~~liVFG~~~~Gl~~~--------------~fd~~~Nt~P~QGsrtIRtEEAv~itLa~L~~~~  261 (268)
T 1k3r_A          204 KTRMRGAREAAILFGGPYKGLPEI--------------DADIWVNTLPGQCTETVRTEEAVLATLSVFNMLT  261 (268)
T ss_dssp             HHHHTTCSEEEEECCCSSSCCCSC--------------CCSEEEBSSTTCSSSCCCHHHHHHHHHHHHHHHT
T ss_pred             hhcccCCCeEEEEECCccccchhh--------------hcCeeEeccCCCCCccccHHHHHHHHHHHhhhhh
Confidence                4789999999999 999865              6999999999999999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	378
d1k3ra2	191	c.116.1.2 (A:1-92,A:164-262) Hypothetical protein	5e-60
d1k3ra1	71	b.40.4.10 (A:93-163) Hypothetical protein MTH1 (MT	0.003

>d1k3ra2 c.116.1.2 (A:1-92,A:164-262) Hypothetical protein MTH1 (MT0001), dimerisation domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 191

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: Hypothetical protein MTH1 (MT0001), dimerisation domain
domain: Hypothetical protein MTH1 (MT0001), dimerisation domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score =  190 bits (484), Expect = 5e-60
 Identities = 62/297 (20%), Positives = 99/297 (33%), Gaps = 115/297 (38%)

Query: 62  TVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRS 121
            +S+ +P S+   T  L++ T     IARA +IF +  +V++                  
Sbjct: 5   DLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYH----------------- 47

Query: 122 NRSDENESGAAFLVRLLQYLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPF 181
              D+ +  A F+  +L Y++TPQYLR+ +F +   L+ VG+LPPL   + +        
Sbjct: 48  ---DDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVGILPPLRTGYEVL-----DT 99

Query: 182 REGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPS 241
           R  +           +L  VG +                V + T                
Sbjct: 100 RRNL---------AESLKTVGAD----------------VVVAT---------------- 118

Query: 242 KPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSDLTLPTFRHLLI 301
                        R A  I+S+                       +     +   R   I
Sbjct: 119 ------------SRNASPITSIL----------------------DEVKTRMRGAREAAI 144

Query: 302 AFGG-LAGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQ 357
            FGG   GL E                   + NT P Q + T+RTEEA+  +L  F 
Sbjct: 145 LFGGPYKGLPEI--------------DADIWVNTLPGQCTETVRTEEAVLATLSVFN 187

>d1k3ra1 b.40.4.10 (A:93-163) Hypothetical protein MTH1 (MT0001), insert domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 71

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Hypothetical protein MTH1 (MT0001), insert domain
domain: Hypothetical protein MTH1 (MT0001), insert domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 170 PHH-LRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRN 228
           PHH   K     +R+G+T+K       GTLVD+G +K  +  + L     ++      R 
Sbjct: 1   PHHPTGKPVTGEYRQGLTVKRVKK---GTLVDIGADKLALCREKLTVNRIMSF-----RV 52

Query: 229 LDADSPRQVVPPSKPKESGMYW 250
           +       +  P +P++   YW
Sbjct: 53  VRLGKEILIE-PDEPED--RYW 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	378
d1k3ra2	191	Hypothetical protein MTH1 (MT0001), dimerisation d	100.0
d1k3ra1	71	Hypothetical protein MTH1 (MT0001), insert domain	99.25

>d1k3ra2 c.116.1.2 (A:1-92,A:164-262) Hypothetical protein MTH1 (MT0001), dimerisation domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: Hypothetical protein MTH1 (MT0001), dimerisation domain
domain: Hypothetical protein MTH1 (MT0001), dimerisation domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=100.00  E-value=3.9e-69  Score=491.50  Aligned_cols=182  Identities=31%  Similarity=0.493  Sum_probs=157.0

Q ss_pred             cceEEEEecCccccCCCCHHHHHHHHHHHHHHHhhhcccEEEEEcCCCCCCccccccccccCCCCCCCcchHHHHHHHHh
Q 017050           60 VPTVSVAVPGSIIDNTQSLELATRLAGQIARAVTIFRIDEVVVFDNKSSSDNYSRSSAANRSNRSDENESGAAFLVRLLQ  139 (378)
Q Consensus        60 ~~tvSIAIP~SIlsnaqslelkT~~agqIARAaaIF~VdEIVVydd~~~~~~~~~~~~~~~~~~~~~~~~~~~fLa~lLq  139 (378)
                      +.++|||||+||++||||+|+|||+|||||||||||+|||||||||+..                    +++.||++|||
T Consensus         3 ~~~lSvaiP~Sil~~~~s~~~~t~~~g~iARa~~if~Vdeivv~dd~~~--------------------~~~~~l~~iL~   62 (191)
T d1k3ra2           3 RVDLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHDDAD--------------------GEARFIRDILT   62 (191)
T ss_dssp             SCEEEEEEETTTTTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEECSSC--------------------CCHHHHHHHHH
T ss_pred             ceEEEEEeChHHhccCCCHHHHHHHHHHHHHHHHhccccEEEEEcCCCc--------------------cHhHHHHHHHH
Confidence            5789999999999999999999999999999999999999999998632                    24689999999


Q ss_pred             hhcCChhhhhhhcCCCCCccccccCCCCCCCCcCCCCCcCCceeEEEeeccCCCCCceEEEeCCCceeeecccCCCCcEE
Q 017050          140 YLETPQYLRKALFSMHSSLRFVGMLPPLDAPHHLRKHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRV  219 (378)
Q Consensus       140 YleTPpYLRK~LFP~h~~Lk~aGlLPPL~~PhH~r~~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~~~l~~g~RV  219 (378)
                      ||||||||||++||+|++|||||+||||++|||.+     ++|+|+                                  
T Consensus        63 YletP~YLRK~lfp~~~~Lk~aGlLpPL~~p~hv~-----~~~~~~----------------------------------  103 (191)
T d1k3ra2          63 YMDTPQYLRRKVFPIMRELKHVGILPPLRTGYEVL-----DTRRNL----------------------------------  103 (191)
T ss_dssp             HHHSCHHHHHHHCCCCGGGGGGGGCCCCCCCCEEE-----EEEEEH----------------------------------
T ss_pred             HHcCCcccccccCCCCcccccccCCCCccCCcccc-----cccccc----------------------------------
Confidence            99999999999999999999999999999999943     233321                                  


Q ss_pred             EEEecCCCCCCCCCCceecCCCCCCCCCcccceEEEEeCChHHHHhcCCCCCCCcEEEEeCCCCCccCCCC----CCCCC
Q 017050          220 TVAMGTNRNLDADSPRQVVPPSKPKESGMYWGYKVRYAPNISSVFKNCSYKGGYDHLIGTSEHGDIVNSSD----LTLPT  295 (378)
Q Consensus       220 TV~l~~~~~~~~~~~~~vVsp~~p~~~G~YWGY~VR~a~sLs~vf~e~p~~~gYD~~IgTS~~G~~i~~~~----~~lp~  295 (378)
                                                                   .+|.+..|||++||||++|+++.+..    ..+++
T Consensus       104 ---------------------------------------------~~~l~~~g~d~~I~TSr~G~~i~~~~~~~~~~~~~  138 (191)
T d1k3ra2         104 ---------------------------------------------AESLKTVGADVVVATSRNASPITSILDEVKTRMRG  138 (191)
T ss_dssp             ---------------------------------------------HHHHHHHCCSEEEEECTTSCBTTTSHHHHHHHHTT
T ss_pred             ---------------------------------------------ccccccCCCCeEEEeCCCCcChhhhhhhccccccC
Confidence                                                         11222348999999999999987641    23468


Q ss_pred             CCcEEEEEcCc-cchhhhhhcccccccccccccCceEEecCCCCCccccchhHHHHHHHhhcchh
Q 017050          296 FRHLLIAFGGL-AGLEESIEEDDGLKRKNAREVFHSYFNTCPHQGSRTIRTEEAIFISLQYFQEP  359 (378)
Q Consensus       296 ~~h~LIVFGg~-~GLe~~~~~d~~l~~~~~~~~FD~~lNt~P~QGsrTIRTEEAvlItLa~L~~~  359 (378)
                      |+|+||||||| +||++              .+||+||||||+||||||||||||+||||+|+..
T Consensus       139 ~~~~lvVFGgP~~Gl~~--------------i~~D~~vNt~P~QGsrtIRTEEAv~itLa~Ln~i  189 (191)
T d1k3ra2         139 AREAAILFGGPYKGLPE--------------IDADIWVNTLPGQCTETVRTEEAVLATLSVFNML  189 (191)
T ss_dssp             CSEEEEECCCSSSCCCS--------------CCCSEEEBSSTTCSSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECCcccCchh--------------hhCCeEEEcCCCCCCcceeHHHHHHHHHHHhhcc
Confidence            99999999998 88863              2599999999999999999999999999999853

>d1k3ra1 b.40.4.10 (A:93-163) Hypothetical protein MTH1 (MT0001), insert domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Hypothetical protein MTH1 (MT0001), insert domain
domain: Hypothetical protein MTH1 (MT0001), insert domain
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=99.25  E-value=6.3e-12  Score=95.82  Aligned_cols=70  Identities=29%  Similarity=0.536  Sum_probs=59.6

Q ss_pred             CCcCC-CCCcCCceeEEEeeccCCCCCceEEEeCCCceeeecccCCCCcEEEEEecCCCCCCCCCCceecCCCCCCCCCc
Q 017050          170 PHHLR-KHEWAPFREGVTLKENAPNSVGTLVDVGLNKHVVVDQVLDPGVRVTVAMGTNRNLDADSPRQVVPPSKPKESGM  248 (378)
Q Consensus       170 PhH~r-~~e~~~yREGvvv~~~~~~~~gs~VdiGl~k~v~i~~~l~~g~RVTV~l~~~~~~~~~~~~~vVsp~~p~~~G~  248 (378)
                      |||.. ....++||||+++++.   ++|+|||||+++++.+...+.+|.|+||+|.+-.      +...|.|.+|++.  
T Consensus         1 PhH~~g~p~vGEiReG~~~rr~---~~g~~vDiGlD~la~~k~~~~~~~r~tfrIvs~~------~pl~VeP~ep~e~--   69 (71)
T d1k3ra1           1 PHHPTGKPVTGEYRQGLTVKRV---KKGTLVDIGADKLALCREKLTVNRIMSFRVVRLG------KEILIEPDEPEDR--   69 (71)
T ss_dssp             TTSCCSSCCTTCEEEEEEEEEC---SSSEEEESSSSCEEECSSCCCSSCEEEEEEEECS------SSCEEEECCCSSS--
T ss_pred             CCCcCCCCcccceeeEEEEEec---CCcEEEEecCCceeeeecccccCcEEEEEEEEcC------CceEeecCCcccc--
Confidence            89964 4579999999999984   6889999999999999999999999999998531      2466889999654  


Q ss_pred             cc
Q 017050          249 YW  250 (378)
Q Consensus       249 YW  250 (378)
                      ||
T Consensus        70 YW   71 (71)
T d1k3ra1          70 YW   71 (71)
T ss_dssp             CC
T ss_pred             cC
Confidence            99