Citrus Sinensis ID: 017053


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MEQLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccEEcccccccccccccccccEEEcccccEEEEEEccccccccEEEcccccccHHHHHHHcccccccccccccEEEEEcccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccHHHcc
ccccEEcccHHHHHHHHHHHHcHHHHHHHHHHHHHcccccHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEcHHHHccccccEEEEEEcccccEEEEEEccccccccEEEEEcccccHHHHHHHcccccccccccccEEEEEEEcccccHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
meqlhlsltptAIFSFVLVSFRSSILVRMCLLRSLFLYHRKgllsvlpptaslchfrtRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIfskypdlfpeevfnmetFKWSFGILFSRLvrlpsmdgrvalvpwadmlnhscevetfldydkssqgvvfttdrqyqpgeQVFISYgkksngelllsygfvpregtnpsdsvelplslkksdKCYKEKLEALRKYGlsasecfpiqitgwPLELMAYAYLVvsppsmkgkFEEMAAAASNkmtskkdikcpeiDEQALQFILDSCESSISKYSRFLqasgsmdldttspkqlNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
MEQLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIeritnvigtyndLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVpregtnpsdsvelplslkksdkCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAvdlctserriLFRAQYIlrrrlrdirsgelralrlfdnfvnlfk
MEQLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
*****LSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVP********************KCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVS*****************************IDEQALQFILDSCESSISKYSRFL***************LNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLF*
***********AIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASN*******IKCPEIDEQALQFILDSCESSISKYSR********************RVFLKQLAVDLCTSERRILFRAQYILRRRL***************N****F*
MEQLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEM************DIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
**QLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEQLHLSLTPTAIFSFVLVSFRSSILVRMCLLRSLFLYHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
E2RBS6588 Histone-lysine N-methyltr yes no 0.494 0.318 0.270 2e-14
B2KI88594 Histone-lysine N-methyltr N/A no 0.494 0.314 0.279 4e-14
Q7SXS7596 Histone-lysine N-methyltr yes no 0.494 0.313 0.261 4e-14
B0VX69595 Histone-lysine N-methyltr yes no 0.494 0.314 0.274 9e-14
Q86TU7594 Histone-lysine N-methyltr yes no 0.494 0.314 0.274 1e-13
A9X1D0595 Histone-lysine N-methyltr N/A no 0.494 0.314 0.274 1e-13
B5FW36595 Histone-lysine N-methyltr N/A no 0.494 0.314 0.274 1e-13
B1MTJ4595 Histone-lysine N-methyltr N/A no 0.494 0.314 0.274 1e-13
C1FXW2589 Histone-lysine N-methyltr N/A no 0.494 0.317 0.274 1e-13
Q91WC0594 Histone-lysine N-methyltr yes no 0.394 0.250 0.303 2e-13
>sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1 Back     alignment and function desciption
 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 65  YLEASQIRE-RAIERITNVIGTYNDLR------LRIFSKYP--DLFP-EEVFNMETFKWS 114
           Y E  ++R+ ++ + I +V   Y +         ++   +P  +  P ++ F  E ++W+
Sbjct: 188 YFEEDEVRDLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDAFTYEDYRWA 247

Query: 115 FGILFSRLVRLPSMDGR---VALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPG 171
              + +R  ++P+ DG    +AL+P  DM NH+  + T   Y+           R ++ G
Sbjct: 248 VSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLIT-TGYNLEDDRCECVALRDFRAG 306

Query: 172 EQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSA 231
           EQ++I YG +SN E ++  GF      N  D V++ L + KSD+ Y  K E L + G+  
Sbjct: 307 EQIYIFYGTRSNAEFVIHSGFFF--DNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPT 364

Query: 232 SECFPIQITGWPLELMAYAYLVV 254
           S  F +  T  P+     A+L V
Sbjct: 365 SSVFALHYTDPPVSAQLLAFLRV 387




Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.
Canis familiaris (taxid: 9615)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3
>sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1 Back     alignment and function description
>sp|Q7SXS7|SETD3_DANRE Histone-lysine N-methyltransferase setd3 OS=Danio rerio GN=setd3 PE=1 SV=1 Back     alignment and function description
>sp|B0VX69|SETD3_CALJA Histone-lysine N-methyltransferase setd3 OS=Callithrix jacchus GN=SETD3 PE=3 SV=2 Back     alignment and function description
>sp|Q86TU7|SETD3_HUMAN Histone-lysine N-methyltransferase setd3 OS=Homo sapiens GN=SETD3 PE=1 SV=1 Back     alignment and function description
>sp|A9X1D0|SETD3_PAPAN Histone-lysine N-methyltransferase setd3 OS=Papio anubis GN=SETD3 PE=3 SV=1 Back     alignment and function description
>sp|B5FW36|SETD3_OTOGA Histone-lysine N-methyltransferase setd3 OS=Otolemur garnettii GN=SETD3 PE=3 SV=1 Back     alignment and function description
>sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2 Back     alignment and function description
>sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1 Back     alignment and function description
>sp|Q91WC0|SETD3_MOUSE Histone-lysine N-methyltransferase setd3 OS=Mus musculus GN=Setd3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
255582876 508 Ribulose-1,5 bisphosphate carboxylase/ox 0.886 0.659 0.856 1e-168
224129218 503 predicted protein [Populus trichocarpa] 0.886 0.666 0.847 1e-166
356547583 499 PREDICTED: ribulose-1,5 bisphosphate car 0.886 0.671 0.832 1e-164
357462493 497 SET domain-containing protein [Medicago 0.886 0.674 0.808 1e-162
357469947 494 SET domain-containing protein [Medicago 0.886 0.678 0.808 1e-162
225447500 497 PREDICTED: ribulose-1,5 bisphosphate car 0.886 0.674 0.850 1e-158
449453618 497 PREDICTED: ribulose-1,5 bisphosphate car 0.886 0.674 0.823 1e-157
15231493 504 rubisco methyltransferase-like protein [ 0.886 0.664 0.805 1e-150
297829320 504 SET domain-containing protein [Arabidops 0.886 0.664 0.808 1e-150
21537309 504 putative ribulose-1,5-bisphosphate carbo 0.886 0.664 0.802 1e-150
>gi|255582876|ref|XP_002532210.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative [Ricinus communis] gi|223528106|gb|EEF30179.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 287/335 (85%), Positives = 310/335 (92%)

Query: 44  LSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPE 103
           +S LP       + TRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPE
Sbjct: 174 ISALPRQPYSLLYWTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPE 233

Query: 104 EVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFT 163
           EVFN+ETFKWSFGILFSRLVRLPSMDG+VALVPWADMLNHSCEVETFLDYDKSSQGVVFT
Sbjct: 234 EVFNLETFKWSFGILFSRLVRLPSMDGKVALVPWADMLNHSCEVETFLDYDKSSQGVVFT 293

Query: 164 TDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEA 223
           TDRQY+PGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVEL LSLKKSDK YKEKLEA
Sbjct: 294 TDRQYEPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELSLSLKKSDKSYKEKLEA 353

Query: 224 LRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCP 283
           L+K+G SAS+CFP+++TGWP+EL+AYAYL VSPPSM  KFEE+AAAASNK T KKD+  P
Sbjct: 354 LKKHGFSASQCFPVRVTGWPVELLAYAYLAVSPPSMSSKFEELAAAASNKTTIKKDVGFP 413

Query: 284 EIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERR 343
           EI+EQALQFILDSCESSISKY++FLQASGSMDLD TSPKQLNRR+FLKQLAVDLC SE+R
Sbjct: 414 EIEEQALQFILDSCESSISKYTKFLQASGSMDLDVTSPKQLNRRLFLKQLAVDLCNSEQR 473

Query: 344 ILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK 378
           ILFRAQ +LRRRLRDIRSGELRAL++FD F N FK
Sbjct: 474 ILFRAQNVLRRRLRDIRSGELRALKIFDGFRNWFK 508




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129218|ref|XP_002320530.1| predicted protein [Populus trichocarpa] gi|222861303|gb|EEE98845.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356547583|ref|XP_003542190.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357462493|ref|XP_003601528.1| SET domain-containing protein [Medicago truncatula] gi|355490576|gb|AES71779.1| SET domain-containing protein [Medicago truncatula] gi|388500078|gb|AFK38105.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357469947|ref|XP_003605258.1| SET domain-containing protein [Medicago truncatula] gi|355506313|gb|AES87455.1| SET domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|225447500|ref|XP_002267469.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Vitis vinifera] gi|296085051|emb|CBI28466.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453618|ref|XP_004144553.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like [Cucumis sativus] gi|449511789|ref|XP_004164054.1| PREDICTED: LOW QUALITY PROTEIN: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15231493|ref|NP_187424.1| rubisco methyltransferase-like protein [Arabidopsis thaliana] gi|6466950|gb|AAF13085.1|AC009176_12 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Arabidopsis thaliana] gi|6648179|gb|AAF21177.1|AC013483_1 putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Arabidopsis thaliana] gi|15028205|gb|AAK76599.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Arabidopsis thaliana] gi|19310671|gb|AAL85066.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Arabidopsis thaliana] gi|332641064|gb|AEE74585.1| rubisco methyltransferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297829320|ref|XP_002882542.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297328382|gb|EFH58801.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21537309|gb|AAM61650.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
TAIR|locus:2077342504 AT3G07670 [Arabidopsis thalian 0.886 0.664 0.805 2.6e-143
UNIPROTKB|E2RBS6588 SETD3 "Histone-lysine N-methyl 0.494 0.318 0.290 3.5e-14
UNIPROTKB|B2KI88594 SETD3 "Histone-lysine N-methyl 0.494 0.314 0.289 3.5e-14
ZFIN|ZDB-GENE-030131-9137597 setd3 "SET domain containing 3 0.539 0.341 0.282 3.6e-14
TAIR|locus:2014764482 LSMT-L "lysine methyltransfera 0.809 0.634 0.258 6.5e-14
UNIPROTKB|F6R2J7594 SETD3 "Uncharacterized protein 0.494 0.314 0.284 7.8e-14
UNIPROTKB|Q86TU7594 SETD3 "Histone-lysine N-methyl 0.494 0.314 0.284 1e-13
UNIPROTKB|A9X1D0595 SETD3 "Histone-lysine N-methyl 0.494 0.314 0.284 1e-13
UNIPROTKB|B0VX69595 SETD3 "Histone-lysine N-methyl 0.494 0.314 0.284 1e-13
UNIPROTKB|B1MTJ4595 SETD3 "Histone-lysine N-methyl 0.494 0.314 0.284 1e-13
TAIR|locus:2077342 AT3G07670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
 Identities = 270/335 (80%), Positives = 297/335 (88%)

Query:    44 LSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLFPE 103
             +S LP       + TR ELD YLEASQIRERAIERITNV+GTY DLR RIFSK+P LFP+
Sbjct:   170 ISALPRQPYSLLYWTRTELDMYLEASQIRERAIERITNVVGTYEDLRSRIFSKHPQLFPK 229

Query:   104 EVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFT 163
             EVFN ETFKWSFGILFSRLVRLPSMDGR ALVPWADMLNH+CEVETFLDYDKSS+GVVFT
Sbjct:   230 EVFNDETFKWSFGILFSRLVRLPSMDGRFALVPWADMLNHNCEVETFLDYDKSSKGVVFT 289

Query:   164 TDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEA 223
             TDR YQPGEQVFISYG KSNGELLLSYGFVPREGTNPSDSVEL LSL+K+DKCY+EKL+A
Sbjct:   290 TDRPYQPGEQVFISYGNKSNGELLLSYGFVPREGTNPSDSVELALSLRKNDKCYEEKLDA 349

Query:   224 LRKYGLSASECFPIQITGWPLELMAYAYLVVSPPSMKGKFEEMAAAASNKMTSKKDIKCP 283
             L+K+GLS  +CFP++ITGWP+ELMAYAYLVVSPP M+  FEEMA AASNK ++K D+K P
Sbjct:   350 LKKHGLSTPQCFPVRITGWPMELMAYAYLVVSPPDMRNNFEEMAKAASNKTSTKNDLKYP 409

Query:   284 EIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLAVDLCTSERR 343
             EI+E ALQFILDSCE+SISKYSRFL+ SGSMDLD TSPKQLNR+ FLKQLAVDL TSERR
Sbjct:   410 EIEEDALQFILDSCETSISKYSRFLKESGSMDLDITSPKQLNRKAFLKQLAVDLSTSERR 469

Query:   344 ILFRAQYILRRRLRDIRSGELRALRLFDNFVNLFK 378
             IL+RAQYILRRRLRDIRSGEL+ALRLF    N FK
Sbjct:   470 ILYRAQYILRRRLRDIRSGELKALRLFSGLRNFFK 504




GO:0009507 "chloroplast" evidence=ISM
GO:0030785 "[ribulose-bisphosphate carboxylase
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0009902 "chloroplast relocation" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0034660 "ncRNA metabolic process" evidence=RCA
UNIPROTKB|E2RBS6 SETD3 "Histone-lysine N-methyltransferase setd3" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B2KI88 SETD3 "Histone-lysine N-methyltransferase setd3" [Rhinolophus ferrumequinum (taxid:59479)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9137 setd3 "SET domain containing 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2014764 LSMT-L "lysine methyltransferase (LSMT)-like" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F6R2J7 SETD3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q86TU7 SETD3 "Histone-lysine N-methyltransferase setd3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A9X1D0 SETD3 "Histone-lysine N-methyltransferase setd3" [Papio anubis (taxid:9555)] Back     alignment and assigned GO terms
UNIPROTKB|B0VX69 SETD3 "Histone-lysine N-methyltransferase setd3" [Callithrix jacchus (taxid:9483)] Back     alignment and assigned GO terms
UNIPROTKB|B1MTJ4 SETD3 "Histone-lysine N-methyltransferase setd3" [Callicebus moloch (taxid:9523)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00141165
hypothetical protein (504 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
pfam09273128 pfam09273, Rubis-subs-bind, Rubisco LSMT substrate 6e-14
pfam00856113 pfam00856, SET, SET domain 6e-10
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 5e-08
>gnl|CDD|220161 pfam09273, Rubis-subs-bind, Rubisco LSMT substrate-binding Back     alignment and domain information
 Score = 67.8 bits (166), Expect = 6e-14
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 210 LKKSDKCYKEKLEALRKYGLSASECFPIQITGW-PLELMAYAYLVVSPPSMKGKFEEMAA 268
           L  SD  Y++KL+ L + GL  +  F + I G    EL+AY  L+         ++ +  
Sbjct: 1   LSPSDPLYEDKLQLLERNGLLENGNFTLGIDGPPSWELLAYLRLLCLSDEELTAWKSVLL 60

Query: 269 AASNKMTSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRV 328
            A            PE +E+ALQF+   C+  +S+Y   L+      L   +  +  R  
Sbjct: 61  GAVIGHKE--APLSPENEEKALQFLEKLCKLLLSEYPTTLEED-EALLKKGNLSEQLR-- 115

Query: 329 FLKQLAVDLCTSERRIL 345
               LAV L   E+RIL
Sbjct: 116 ----LAVRLRLGEKRIL 128


Members of this family adopt a multihelical structure, with an irregular array of long and short alpha-helices. They allow binding of the protein to substrate, such as the N-terminal tails of histones H3 and H4 and the large subunit of the Rubisco holoenzyme complex. Length = 128

>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
KOG1337472 consensus N-methyltransferase [General function pr 100.0
KOG1338466 consensus Uncharacterized conserved protein [Funct 99.93
PF09273128 Rubis-subs-bind: Rubisco LSMT substrate-binding; I 99.8
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.25
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 98.41
KOG2589453 consensus Histone tail methylase [Chromatin struct 95.86
KOG1085392 consensus Predicted methyltransferase (contains a 94.19
KOG4442 729 consensus Clathrin coat binding protein/Huntingtin 93.45
KOG1079739 consensus Transcriptional repressor EZH1 [Transcri 91.99
KOG10801005 consensus Histone H3 (Lys4) methyltransferase comp 89.97
COG2940480 Proteins containing SET domain [General function p 89.28
>KOG1337 consensus N-methyltransferase [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=8.6e-35  Score=295.17  Aligned_cols=327  Identities=31%  Similarity=0.434  Sum_probs=258.7

Q ss_pred             HHHHHHHHHHHhh---cchHHHhhcCCCCCCCCCCCCHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 017053           25 ILVRMCLLRSLFL---YHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLF  101 (378)
Q Consensus        25 ~~l~~~Ll~e~~~---s~w~pYl~~LP~~~~~pl~w~~~el~~~L~gs~l~~~~~~~~~~~~~~~~~~~~~l~~~~p~~f  101 (378)
                      +.++.+|+++...   +.|.||+..||..+++|++|...++. .|.++.....+..+++.++..+..+.+ +...+|..+
T Consensus       112 ~~l~~~l~~~~~~~~~s~w~~~i~~l~~~~~~p~~~~~~~v~-~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  189 (472)
T KOG1337|consen  112 IALALFLLLEWAHGEISKWKPYISTLPSQYNSPLLWSEDEVK-SLLSTPLFEIVASRRQNLVNKSAELLE-VLQSHPSLF  189 (472)
T ss_pred             HHHHHHHHHhhhccccccchhhhhhchhhcCCccccCHHHHH-HhhcchhhHHHHHHHHHhhhhHHHHHH-HHHhccccc
Confidence            7899999999876   68999999999999999999999998 599999998888888777776666554 334455544


Q ss_pred             C---cccccHHHHHHHHHhhhccceeccCC--------CCceeeeecccccCCCCCCcccEEeeCCCCeEEEEecCcCCC
Q 017053          102 P---EEVFNMETFKWSFGILFSRLVRLPSM--------DGRVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQP  170 (378)
Q Consensus       102 ~---~~~~t~e~f~wA~~~v~SRaf~~~~~--------~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~~a~~~i~~  170 (378)
                      +   .+.++++.|.||+++|.||+|+.+..        .+..+|+|++||+||++.. ..+.|+..++.+.+++.++|++
T Consensus       190 ~~~~~d~~~~~~~~w~~~~~~sr~~~~~~~~~~~~~~~~~~~~L~P~~D~~NH~~~~-~~~~~~~~d~~~~l~~~~~v~~  268 (472)
T KOG1337|consen  190 GSDLFDTFTFSAFKWAYSIVNSRAFYLPSLQRLTAGDPDDNEALAPLIDLLNHSPEV-IKAGYNQEDEAVELVAERDVSA  268 (472)
T ss_pred             cccccCccchHHHHHHHHHHhhhhhccccccccccCCCCcchhhhhhHHhhccCchh-ccccccCCCCcEEEEEeeeecC
Confidence            3   23489999999999999999987644        2367999999999999998 4557777777999999999999


Q ss_pred             CceeEecCCCCChHHHHHhCCCccCCCCCCCCceeeccccCCCchhHHHHHHHHHHCCCCCCceeeeecCCCC-HHHHHH
Q 017053          171 GEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQITGWP-LELMAY  249 (378)
Q Consensus       171 Geei~i~YG~~~n~~lL~~YGFv~~~~~Np~D~v~l~~~l~~~d~~~~~k~~~L~~~gl~~~~~f~l~~~~~p-~~Ll~~  249 (378)
                      |+||||+||+++|++||.+||||.+  +||+|.|.+.+.++..++....+...+..+++.....|.+...+.| .+++..
T Consensus       269 geevfi~YG~~~N~eLL~~YGFv~~--~N~~d~v~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (472)
T KOG1337|consen  269 GEEVFINYGPKSNAELLLHYGFVEE--DNPYDSVTLKLALPPEDVSYLDKSDVLKKNGLPSSGEFSILLTGEPVSEMLLL  346 (472)
T ss_pred             CCeEEEecCCCchHHHHHhcCCCCC--CCCcceEEEeecccccccchhHHHHHHhhcCCCCCceEEEeecCCchhhhhhh
Confidence            9999999999999999999999988  9999999999999999999989999999999998888888877765 333444


Q ss_pred             HHHHcCCchhh--hhHHHHH-HHHhcccCCCCCCCCchHHHHHHHHHHHH-HHHHHhhccchhhhcCCCCCCCCCccchh
Q 017053          250 AYLVVSPPSMK--GKFEEMA-AAASNKMTSKKDIKCPEIDEQALQFILDS-CESSISKYSRFLQASGSMDLDTTSPKQLN  325 (378)
Q Consensus       250 lRv~~~~~~e~--~~~~~l~-~~~~~~~~~~~~~~s~~nE~~~~~~L~~~-~~~~L~~y~tt~eeD~~~l~~~~~~~~~~  325 (378)
                      .++..+..+..  +.+.... ..............+..+|...+..+.+. |...+..+.++++++...+.+.    .++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~vl~~~----~l~  422 (472)
T KOG1337|consen  347 FLLLDALSERLESELVCEETSISRSCEEFLSGLPVSLDNEQKLLYGLQKLLCSLTLRVFKALIDEDESVLKDN----ILS  422 (472)
T ss_pred             hhhhccccccchhhhhhhhcccccccccccccCceeecchHHHHHHHhhccccchhcccchhhhhhhhhhccc----ccc
Confidence            44343333322  1111110 00111112234455578999999999999 8889999999998777766541    122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccch
Q 017053          326 RRVFLKQLAVDLCTSERRILFRAQYILRRRLRDIRSGE  363 (378)
Q Consensus       326 ~~~~~~~~A~~~R~~EK~IL~~~~~~l~~~l~~l~~~~  363 (378)
                      .   +..++..++..+|+||.+++..+..+...+++..
T Consensus       423 ~---~~~~~~k~~~~~~~iL~~~~~~~~~~~~~l~s~~  457 (472)
T KOG1337|consen  423 K---LLELLEKLRTLEKRILEKSLKLLRSRLKLLHSLE  457 (472)
T ss_pred             h---hhhhhhhhhhhHHHHHHHHHHHHHHhhhhccccc
Confidence            2   3678999999999999999999998888888766



>KOG1338 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF09273 Rubis-subs-bind: Rubisco LSMT substrate-binding; InterPro: IPR015353 This domain adopts a multihelical structure, with an irregular array of long and short alpha-helices Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] Back     alignment and domain information
>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1079 consensus Transcriptional repressor EZH1 [Transcription] Back     alignment and domain information
>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3smt_A497 Crystal Structure Of Human Set Domain-Containing Pr 3e-14
1mlv_A444 Structure And Catalytic Mechanism Of A Set Domain P 2e-11
2h21_A440 Structure Of Rubisco Lsmt Bound To Adomet Length = 2e-11
3qxy_A449 Human Setd6 In Complex With Rela Lys310 Length = 44 8e-07
>pdb|3SMT|A Chain A, Crystal Structure Of Human Set Domain-Containing Protein3 Length = 497 Back     alignment and structure

Iteration: 1

Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 10/197 (5%) Query: 64 RYLEASQIRERAIERITNVIGTYNDLRLRIFSKYP--DLFP-EEVFNMETFKWSFGILFS 120 RYL+++Q + N Y ++ +P + P ++ F E ++W+ + + Sbjct: 194 RYLQSTQAIHDVFSQYKNTARQYAYF-YKVIQTHPHANKLPLKDSFTYEDYRWAVSSVXT 252 Query: 121 RLVRLPSMDGR---VALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVFIS 177 R ++P+ DG +AL+P D NH+ + T Y+ + ++ GEQ++I Sbjct: 253 RQNQIPTEDGSRVTLALIPLWDXCNHTNGLIT-TGYNLEDDRCECVALQDFRAGEQIYIF 311 Query: 178 YGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPI 237 YG +SN E ++ GF N D V++ L + KSD+ Y K E L + G+ S F + Sbjct: 312 YGTRSNAEFVIHSGFFF--DNNSHDRVKIKLGVSKSDRLYAXKAEVLARAGIPTSSVFAL 369 Query: 238 QITGWPLELMAYAYLVV 254 T P+ A+L V Sbjct: 370 HFTEPPISAQLLAFLRV 386
>pdb|1MLV|A Chain A, Structure And Catalytic Mechanism Of A Set Domain Protein Methyltransferase Length = 444 Back     alignment and structure
>pdb|2H21|A Chain A, Structure Of Rubisco Lsmt Bound To Adomet Length = 440 Back     alignment and structure
>pdb|3QXY|A Chain A, Human Setd6 In Complex With Rela Lys310 Length = 449 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3smt_A497 Histone-lysine N-methyltransferase SETD3; histone 2e-48
2h21_A440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 1e-46
3qxy_A449 N-lysine methyltransferase SETD6; epigenetics, pro 3e-46
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 5e-04
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Length = 497 Back     alignment and structure
 Score =  170 bits (431), Expect = 2e-48
 Identities = 68/326 (20%), Positives = 128/326 (39%), Gaps = 20/326 (6%)

Query: 44  LSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLR--LRIFSKYPDLF 101
           +  LP       +    E+  YL+++Q       +  N    Y      ++       L 
Sbjct: 175 IQTLPSEYDTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLP 233

Query: 102 PEEVFNMETFKWSFGILFSRLVRLPSMDG---RVALVPWADMLNHSCEVETFLDYDKSSQ 158
            ++ F  E ++W+   + +R  ++P+ DG    +AL+P  DM NH+  + T   Y+    
Sbjct: 234 LKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITT-GYNLEDD 292

Query: 159 GVVFTTDRQYQPGEQVFISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYK 218
                  + ++ GEQ++I YG +SN E ++  GF      N  D V++ L + KSD+ Y 
Sbjct: 293 RCECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFFFDN--NSHDRVKIKLGVSKSDRLYA 350

Query: 219 EKLEALRKYGLSASECFPIQITG--WPLELMAYAY-LVVSPPSMKGKFEEMAAAASNKMT 275
            K E L + G+  S  F +  T      +L+A+     ++   +K      +A       
Sbjct: 351 MKAEVLARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTL 410

Query: 276 SKKDIK-CPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFLKQLA 334
              +     + + +   F+ D     +  Y   ++     D        L+ R    ++A
Sbjct: 411 GNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIE----EDKSVLKNHDLSVR---AKMA 463

Query: 335 VDLCTSERRILFRAQYILRRRLRDIR 360
           + L   E+ IL +A           R
Sbjct: 464 IKLRLGEKEILEKAVKSAAVNREYYR 489


>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Length = 440 Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Length = 449 Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
3smt_A497 Histone-lysine N-methyltransferase SETD3; histone 100.0
3qxy_A449 N-lysine methyltransferase SETD6; epigenetics, pro 100.0
2h21_A440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 100.0
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 98.82
3qww_A433 SET and MYND domain-containing protein 2; methyltr 98.78
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 98.72
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 98.39
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 97.74
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 97.66
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 97.5
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 97.35
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 97.2
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 97.15
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 97.14
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 96.93
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 96.91
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 96.91
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 96.79
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 96.76
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 96.56
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 96.53
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 96.42
3db5_A151 PR domain zinc finger protein 4; methyltransferase 93.53
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 93.14
3dal_A196 PR domain zinc finger protein 1; methyltransferase 91.63
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 88.49
3ray_A237 PR domain-containing protein 11; structural genomi 82.92
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.1e-58  Score=470.08  Aligned_cols=324  Identities=22%  Similarity=0.344  Sum_probs=272.6

Q ss_pred             HHHHHHHHHHHHhh--cchHHHhhcCCCCCCCCCCCCHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 017053           24 SILVRMCLLRSLFL--YHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPDLF  101 (378)
Q Consensus        24 ~~~l~~~Ll~e~~~--s~w~pYl~~LP~~~~~pl~w~~~el~~~L~gs~l~~~~~~~~~~~~~~~~~~~~~l~~~~p~~f  101 (378)
                      +..|+++|++|+..  |+|+||+++||+.+++|++|+++|++ +|+||++...+.++.+.+.++|..+.. ++..+|+.+
T Consensus       153 ~~~Lal~Ll~E~~~~~S~w~pYl~~LP~~~~~pl~w~~eel~-~L~gt~l~~~v~~~~~~~~~~~~~~~~-~~~~~p~~~  230 (497)
T 3smt_A          153 NIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVR-YLQSTQAIHDVFSQYKNTARQYAYFYK-VIQTHPHAN  230 (497)
T ss_dssp             HHHHHHHHHHHHTCTTCTTHHHHTTSCSCCCSGGGCCHHHHH-TTSSSSHHHHHHHHHHHHHHHHHHHHH-HC----CCC
T ss_pred             HHHHHHHHHHHhcCCCCchHHHHHhCCCCCCCCCcCCHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHHH-HHHhCcccc
Confidence            56799999999864  79999999999999999999999998 699999999998888888899988764 566777753


Q ss_pred             --C-cccccHHHHHHHHHhhhccceeccCCCC---ceeeeecccccCCCCCCcccEEeeCCCCeEEEEecCcCCCCceeE
Q 017053          102 --P-EEVFNMETFKWSFGILFSRLVRLPSMDG---RVALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRQYQPGEQVF  175 (378)
Q Consensus       102 --~-~~~~t~e~f~wA~~~v~SRaf~~~~~~~---~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~  175 (378)
                        + .+.+|+++|+||+++|+||+|.++..+|   ..+|||++||+||++.++. ..|+.+++++++++.++|++|||||
T Consensus       231 ~~~~~~~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~-~~~~~~~~~~~~~a~~~i~~Geei~  309 (497)
T 3smt_A          231 KLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLIT-TGYNLEDDRCECVALQDFRAGEQIY  309 (497)
T ss_dssp             CSTTTTCCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEE-EEEETTTTEEEEEESSCBCTTCEEE
T ss_pred             cCccccccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccc-eeeeccCCeEEEEeCCccCCCCEEE
Confidence              2 3578999999999999999999986544   4699999999999998743 3566678899999999999999999


Q ss_pred             ecCCCCChHHHHHhCCCccCCCCCCCCceeeccccCCCchhHHHHHHHHHHCCCCCCceeeeecC--CCCHHHHHHHHHH
Q 017053          176 ISYGKKSNGELLLSYGFVPREGTNPSDSVELPLSLKKSDKCYKEKLEALRKYGLSASECFPIQIT--GWPLELMAYAYLV  253 (378)
Q Consensus       176 i~YG~~~n~~lL~~YGFv~~~~~Np~D~v~l~~~l~~~d~~~~~k~~~L~~~gl~~~~~f~l~~~--~~p~~Ll~~lRv~  253 (378)
                      |+||+++|++||++|||+++  +||+|.|.|.+.++++|+++..|.++|+.+|+....+|.+..+  ++|++|++++|++
T Consensus       310 isYG~~~n~~Ll~~YGFv~~--~Np~D~v~l~l~~~~~d~l~~~K~~~L~~~gl~~~~~f~l~~~~~~~~~~Ll~~LRvl  387 (497)
T 3smt_A          310 IFYGTRSNAEFVIHSGFFFD--NNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFALHFTEPPISAQLLAFLRVF  387 (497)
T ss_dssp             ECCCSCCHHHHHHHHSCCCT--TCTTCEEEEEEECCTTSTTHHHHHHHHHHTTCCSEEEEEEESSSSCSCHHHHHHHHHH
T ss_pred             EeCCCCChHHHHHHCCCCCC--CCCCceEEEEecCCCcchhHHHHHHHHHHcCCCccceeeeecCCCCCCHHHHHHHHHH
Confidence            99999999999999999999  9999999999999999999999999999999998788888754  5789999999999


Q ss_pred             cCCchhhhhHHHHHHHHhccc---CCCCCCCCchHHHHHHHHHHHHHHHHHhhccchhhhcCCCCCCCCCccchhhHHHH
Q 017053          254 VSPPSMKGKFEEMAAAASNKM---TSKKDIKCPEIDEQALQFILDSCESSISKYSRFLQASGSMDLDTTSPKQLNRRVFL  330 (378)
Q Consensus       254 ~~~~~e~~~~~~l~~~~~~~~---~~~~~~~s~~nE~~~~~~L~~~~~~~L~~y~tt~eeD~~~l~~~~~~~~~~~~~~~  330 (378)
                      +++++++..+.. .+....+.   .....++|.+||.+++++|.+.|+.+|+.|+||+++|++++.+.    .++.   |
T Consensus       388 ~~~~~el~~~~~-~~~~~~~~~~l~~~~~piS~~nE~~v~~~L~~~~~~~L~~Y~TtieeDe~lL~~~----~ls~---r  459 (497)
T 3smt_A          388 CMTEEELKEHLL-GDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNH----DLSV---R  459 (497)
T ss_dssp             TCCHHHHHHHHH-TCSSSCTTTTTTCTTSCSCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHTTCT----TSCH---H
T ss_pred             hCCHHHHHHHhc-ccchhhhhhhcccccCCCChhhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHhcC----CCCH---H
Confidence            999988754321 00000111   11234678999999999999999999999999999999987652    1333   4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 017053          331 KQLAVDLCTSERRILFRAQYILRRRLRDIR  360 (378)
Q Consensus       331 ~~~A~~~R~~EK~IL~~~~~~l~~~l~~l~  360 (378)
                      +++|+++|+|||+||+++++.++.+....+
T Consensus       460 ~r~Av~vR~gEK~IL~~~l~~~~~~~~~~~  489 (497)
T 3smt_A          460 AKMAIKLRLGEKEILEKAVKSAAVNREYYR  489 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999998776544



>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 378
d2h2ja2261 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain 4e-24
d2h2ja1176 a.166.1.1 (A:311-486) RuBisCo LSMT C-terminal, sub 2e-17
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 2e-04
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 261 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]
 Score = 97.7 bits (242), Expect = 4e-24
 Identities = 47/188 (25%), Positives = 68/188 (36%), Gaps = 19/188 (10%)

Query: 29  MCLLRSLFLYHRKGLLSVLPPTASLCHFRTR------AELDRYLEASQIRERAIERITNV 82
              +    +  R    SV      +    T        E  + L+ SQ+ +  +     V
Sbjct: 76  WLSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGSQLLKTTVSVKEYV 135

Query: 83  IGTYNDLRLRIFSKYPDLFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLN 142
                 L   I      LFP+    ++ F W+FGIL SR       +    +VP AD++N
Sbjct: 136 KNECLKLEQEIILPNKRLFPDP-VTLDDFFWAFGILRSRAFSRLRNENL-VVVPMADLIN 193

Query: 143 HSC---------EVETFLDYDKSSQGVVFTTDRQYQPGEQVFISYG-KKSNGELLLSYGF 192
           HS          EV+               +    + GEQV+I Y   KSN EL L YGF
Sbjct: 194 HSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLNKSNAELALDYGF 253

Query: 193 VPREGTNP 200
           +     N 
Sbjct: 254 IE-PNENR 260


>d2h2ja1 a.166.1.1 (A:311-486) RuBisCo LSMT C-terminal, substrate-binding domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 176 Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 99.97
d2h2ja1176 RuBisCo LSMT C-terminal, substrate-binding domain 99.88
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 98.27
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 97.6
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 97.08
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 96.92
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=99.97  E-value=4.8e-32  Score=250.39  Aligned_cols=176  Identities=28%  Similarity=0.396  Sum_probs=150.4

Q ss_pred             chHHHHHHHHHHHHhh--cchHHHhhcCCCCCCCCCCCCHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 017053           22 RSSILVRMCLLRSLFL--YHRKGLLSVLPPTASLCHFRTRAELDRYLEASQIRERAIERITNVIGTYNDLRLRIFSKYPD   99 (378)
Q Consensus        22 ~~~~~l~~~Ll~e~~~--s~w~pYl~~LP~~~~~pl~w~~~el~~~L~gs~l~~~~~~~~~~~~~~~~~~~~~l~~~~p~   99 (378)
                      .++..++++|++|+..  |.|+||+++||+.+.+|++|+.++++ .|+++.+...+....+.+..+|..+...+....++
T Consensus        74 ~~~~~l~~~l~~e~~~~~s~~~~y~~~lp~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (261)
T d2h2ja2          74 KPWLSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQ-ELQGSQLLKTTVSVKEYVKNECLKLEQEIILPNKR  152 (261)
T ss_dssp             CHHHHHHHHHHHHHHCTTCTTHHHHTTSCSCCSCGGGCCHHHHH-TTTTCHHHHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred             CcHHHHHHHHHHHHhCCCCchhhhhhccccccCCcccCCHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            3578999999999865  69999999999999999999999998 59999999999998999999999988776666665


Q ss_pred             CCCcccccHHHHHHHHHhhhccceeccCCCCceeeeecccccCCCCCCcccEEeeC---------CCCeEEEEecCcCCC
Q 017053          100 LFPEEVFNMETFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCEVETFLDYDK---------SSQGVVFTTDRQYQP  170 (378)
Q Consensus       100 ~f~~~~~t~e~f~wA~~~v~SRaf~~~~~~~~~~LvP~~Dm~NH~~~~~~~~~~~~---------~~~~~~~~a~~~i~~  170 (378)
                      .++ ..++++.|.||+++|.||+|..+... ..+|+|++||+||++.+|+.+.++.         .++.++++|.++|++
T Consensus       153 ~~~-~~~~~~~~~~a~~~v~sr~~~~~~~~-~~~l~P~~d~~NHsc~pn~~~~~~~~~~~~~~~~~~~~~~l~A~r~I~~  230 (261)
T d2h2ja2         153 LFP-DPVTLDDFFWAFGILRSRAFSRLRNE-NLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKA  230 (261)
T ss_dssp             TCC-SCCCHHHHHHHHHHHHHHSBCCC----CCBCCTTGGGCEECSSCCSCCCCCC-----------CEEEEECSSCCCT
T ss_pred             hcc-CccCHHHHHHHHHHhhcccccccccc-cccchhhhHHhhcCCCCCcccccccccCcccccCCCcEEEEEECCCCCC
Confidence            554 45899999999999999999887543 4799999999999999998765432         346789999999999


Q ss_pred             CceeEecCCC-CChHHHHHhCCCccCCCCCCC
Q 017053          171 GEQVFISYGK-KSNGELLLSYGFVPREGTNPS  201 (378)
Q Consensus       171 Geei~i~YG~-~~n~~lL~~YGFv~~~~~Np~  201 (378)
                      ||||||+||+ ++|++||.+||||++ ++|||
T Consensus       231 GEEI~isYG~~~~n~~ll~~yGFv~~-~~n~~  261 (261)
T d2h2ja2         231 GEQVYIQYDLNKSNAELALDYGFIEP-NENRH  261 (261)
T ss_dssp             TSBCEECSCSSCCHHHHHHHSSCCCS-CGGGC
T ss_pred             CCEEEEecCCCCCHHHHHHhCCCCCC-CCCCC
Confidence            9999999995 799999999999987 35886



>d2h2ja1 a.166.1.1 (A:311-486) RuBisCo LSMT C-terminal, substrate-binding domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure