Citrus Sinensis ID: 017054
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| 225456422 | 446 | PREDICTED: probable S-acyltransferase At | 0.955 | 0.809 | 0.703 | 1e-144 | |
| 255543657 | 443 | zinc finger protein, putative [Ricinus c | 0.973 | 0.830 | 0.649 | 1e-140 | |
| 224134088 | 450 | predicted protein [Populus trichocarpa] | 0.978 | 0.822 | 0.640 | 1e-138 | |
| 147863413 | 500 | hypothetical protein VITISV_001671 [Viti | 0.955 | 0.722 | 0.607 | 1e-138 | |
| 297734469 | 419 | unnamed protein product [Vitis vinifera] | 0.896 | 0.809 | 0.685 | 1e-138 | |
| 224119754 | 457 | predicted protein [Populus trichocarpa] | 0.994 | 0.822 | 0.638 | 1e-137 | |
| 225451529 | 452 | PREDICTED: probable S-acyltransferase At | 0.936 | 0.783 | 0.650 | 1e-137 | |
| 356559470 | 438 | PREDICTED: probable S-acyltransferase At | 0.970 | 0.837 | 0.616 | 1e-135 | |
| 296082308 | 489 | unnamed protein product [Vitis vinifera] | 0.880 | 0.680 | 0.643 | 1e-133 | |
| 449460541 | 450 | PREDICTED: probable S-acyltransferase At | 0.981 | 0.824 | 0.626 | 1e-133 |
| >gi|225456422|ref|XP_002284252.1| PREDICTED: probable S-acyltransferase At3g26935 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/364 (70%), Positives = 292/364 (80%), Gaps = 3/364 (0%)
Query: 1 MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQT 60
MD+FPHHLGISIMV+VIA TL+ L+LLLLTSGRDPG+I RNA+PPE EGY+GTEVG GQT
Sbjct: 73 MDDFPHHLGISIMVVVIAFTLYILVLLLLTSGRDPGIIPRNAHPPEPEGYDGTEVGAGQT 132
Query: 61 PQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGL 120
PQL LPRTKDVVVNG+ VK+KYCDTCM YRPPRCSHCSICNNCV++FDHHCPWVGQCIGL
Sbjct: 133 PQLRLPRTKDVVVNGITVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGL 192
Query: 121 RNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISV 180
RNYRFFFMFVFSTTLLC+YV FCW+ I +IM+G+ +IWKAM K+PASI LI+YTF++V
Sbjct: 193 RNYRFFFMFVFSTTLLCVYVFGFCWVYIMRIMDGKETTIWKAMAKTPASIVLIVYTFVAV 252
Query: 181 WFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRA 240
WFVGGL+VFH YLIS NQSTYENFR RYD NPYNKGVI+NFME+FCTSIP+SKNNFRA
Sbjct: 253 WFVGGLSVFHLYLISTNQSTYENFRYRYDRRANPYNKGVIENFMEIFCTSIPSSKNNFRA 312
Query: 241 KIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGEAVREADGSEGRTNNDDNVDKL 300
K+PKEP I +R + GGF SP + K +DIEMGRK W EA EA E + +NDD VDK
Sbjct: 313 KVPKEPEIPARTVGGGFVSPILGKDAADIEMGRKPFWDEAAAEAGEYERQLSNDDGVDKD 372
Query: 301 GGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVE--ASKQVP 358
G D V+ SR L EG EG HHRRSSWG SGSWDIS E A E ++ +V
Sbjct: 373 GEFTD-VSPYSSRALHAEGTEGPGALHHRRSSWGRASGSWDISPEVIAMVAEVGSANRVS 431
Query: 359 GSSN 362
G S
Sbjct: 432 GGST 435
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543657|ref|XP_002512891.1| zinc finger protein, putative [Ricinus communis] gi|223547902|gb|EEF49394.1| zinc finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224134088|ref|XP_002321733.1| predicted protein [Populus trichocarpa] gi|222868729|gb|EEF05860.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147863413|emb|CAN81512.1| hypothetical protein VITISV_001671 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297734469|emb|CBI15716.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224119754|ref|XP_002318154.1| predicted protein [Populus trichocarpa] gi|222858827|gb|EEE96374.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225451529|ref|XP_002273157.1| PREDICTED: probable S-acyltransferase At3g26935 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356559470|ref|XP_003548022.1| PREDICTED: probable S-acyltransferase At3g26935-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|296082308|emb|CBI21313.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449460541|ref|XP_004148004.1| PREDICTED: probable S-acyltransferase At3g26935-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| TAIR|locus:2091960 | 443 | AT3G26935 "AT3G26935" [Arabido | 0.973 | 0.830 | 0.547 | 1.1e-110 | |
| TAIR|locus:2099483 | 476 | AT3G48760 [Arabidopsis thalian | 0.883 | 0.701 | 0.571 | 2.1e-107 | |
| TAIR|locus:2163001 | 410 | AT5G41060 [Arabidopsis thalian | 0.867 | 0.8 | 0.544 | 1.1e-96 | |
| TAIR|locus:2121949 | 407 | AT4G24630 [Arabidopsis thalian | 0.849 | 0.788 | 0.446 | 5.7e-75 | |
| TAIR|locus:2080555 | 477 | AT3G56930 [Arabidopsis thalian | 0.568 | 0.450 | 0.572 | 2.6e-70 | |
| TAIR|locus:2175349 | 413 | AT5G05070 "AT5G05070" [Arabido | 0.716 | 0.656 | 0.464 | 5.2e-65 | |
| TAIR|locus:2063172 | 411 | AT2G40990 [Arabidopsis thalian | 0.563 | 0.518 | 0.518 | 1.2e-60 | |
| TAIR|locus:2103650 | 338 | AT3G56920 [Arabidopsis thalian | 0.558 | 0.624 | 0.515 | 2e-56 | |
| MGI|MGI:2444393 | 364 | Zdhhc9 "zinc finger, DHHC doma | 0.619 | 0.642 | 0.396 | 6.6e-42 | |
| RGD|1561389 | 364 | Zdhhc9 "zinc finger, DHHC-type | 0.619 | 0.642 | 0.396 | 6.6e-42 |
| TAIR|locus:2091960 AT3G26935 "AT3G26935" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 206/376 (54%), Positives = 255/376 (67%)
Query: 1 MDNFPHHLGISIMVIVXXXXXXXXXXXXXXSGRDPGVIARNANPPELEGYEGT-EVGPGQ 59
+D+F G+SI+ + SGRDPG+I RNA+PPE E +G + G GQ
Sbjct: 68 IDDFSDSWGVSIVAVAVVFTIYDLILLLLTSGRDPGIIPRNAHPPEPETLDGNMDAGAGQ 127
Query: 60 TPQLCLPRTKDXXXXXXXXKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIG 119
TPQL LPR K+ K+KYCDTCM YRPPRCSHCSICNNCV++FDHHCPWVGQCIG
Sbjct: 128 TPQLRLPRIKEVQLNGITFKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIG 187
Query: 120 LRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFIS 179
+RNYRFFFMFVFSTTLLCIYV AFCW+ IRKIM E+ + WKAM K+PASI LIIYTFIS
Sbjct: 188 MRNYRFFFMFVFSTTLLCIYVFAFCWVYIRKIMESEHTTTWKAMLKTPASIVLIIYTFIS 247
Query: 180 VWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFR 239
+WFVGGLTVFH YLIS NQ+TYENFR RYD NP+NKGV+ NF E F ++IP SKN+FR
Sbjct: 248 MWFVGGLTVFHLYLISTNQTTYENFRYRYDRRSNPHNKGVVNNFKETFFSTIPPSKNDFR 307
Query: 240 AKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGE-AVREADGSEGRTNNDDNVD 298
A + +EP + R ++GGF SPN+ K +IEMGRK W + +D +G+ N++ +
Sbjct: 308 AMVQREPPLPPRSVAGGFMSPNMGKANDEIEMGRKAVWADMGPAMSDHGDGKHGNNERLH 367
Query: 299 KLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQVP 358
G ++ D+ + + R H RRSSWG KSGSWD+S E A A +Q
Sbjct: 368 VKDGELGELSPDIRATVDEQS--DRPSMHPRRSSWGRKSGSWDMSPEVMALAARVGEQNQ 425
Query: 359 ---GSSNGN-LTRENQ 370
GSS+G+ L EN+
Sbjct: 426 NGGGSSSGSGLVTENR 441
|
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| TAIR|locus:2099483 AT3G48760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163001 AT5G41060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121949 AT4G24630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080555 AT3G56930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2175349 AT5G05070 "AT5G05070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063172 AT2G40990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2103650 AT3G56920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:2444393 Zdhhc9 "zinc finger, DHHC domain containing 9" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1561389 Zdhhc9 "zinc finger, DHHC-type containing 9" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00017993001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (446 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 8e-43 | |
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 2e-34 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 8e-43
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 24 LILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYC 83
L T DPG + +N E E ++ ++K+C
Sbjct: 1 LWSYFKTIFTDPGYVPKNPTEKEQEKQ----------------PDEESEEGDEEDELKFC 44
Query: 84 DTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAF 143
TC +PPR HC +CN CV +FDHHCPW+ CIG RN+++F +F+ TL I +
Sbjct: 45 STCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVL 104
Query: 144 CWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYEN 203
+ + ++ + + ++ + I L++ F ++ + L FH YLI +N +TYE
Sbjct: 105 SFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLF-LSFLLFFHLYLILKNITTYEY 163
Query: 204 FRNR 207
+ +
Sbjct: 164 IKKK 167
|
This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| KOG1315 | 307 | consensus Predicted DHHC-type Zn-finger protein [G | 100.0 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| KOG1314 | 414 | consensus DHHC-type Zn-finger protein [General fun | 100.0 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 100.0 | |
| KOG1313 | 309 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| KOG1312 | 341 | consensus DHHC-type Zn-finger proteins [General fu | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.94 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 95.11 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 92.98 | |
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 92.65 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 92.38 |
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=374.38 Aligned_cols=222 Identities=37% Similarity=0.690 Sum_probs=181.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHcc---CCcccCCCCCCCCccCCCCCCCCCCCCCCcCCCCcceeEecceEeeeeec
Q 017054 7 HLGISIMVIVIALTLFALILLLLTSGR---DPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYC 83 (378)
Q Consensus 7 ~~g~~i~vi~~vl~i~~li~l~~ts~~---DPGiiPr~~~~~~~e~~~~~e~~~g~~p~~~~p~~k~v~vng~~~~~k~C 83 (378)
..+..+.++..+++++.++.++.++.+ |||++|++..+. .+ . .+ +.++.+++.++|..++.+||
T Consensus 50 ~~~~~~~~~~~if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~----~~---~----~~--~~~~~~~~~~~~~~~~~~~C 116 (299)
T KOG1311|consen 50 GVSPAVLVLGAIFFLLNILNLMLACFRMLSDPGIVPRADDEQ----IE---D----PE--RAPLYKNVDVNGIQVEWKYC 116 (299)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhcccCCCceecCcccCC----CC---C----cc--ccccCCCcccCCcccceEEc
Confidence 456788888888888888888888877 999999975110 01 0 01 45678889999999999999
Q ss_pred ccCCcccCCCCccCccCCcccccCCccCccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchhhh--h
Q 017054 84 DTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIW--K 161 (378)
Q Consensus 84 ~tC~i~rPpRs~HC~~C~~CV~rfDHHCpWvgnCIG~rN~r~F~lFL~~~~l~~i~~~~~~~~~i~~~~~~~~~~~~--~ 161 (378)
.+|+.+||||||||++||+||+||||||||+|||||+||||||++|++++++++++.+++++..+...........+ .
T Consensus 117 ~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (299)
T KOG1311|consen 117 DTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVL 196 (299)
T ss_pred CcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999988887665443333322 2
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhc-ccCCCCCCCCHHHHHHHHHhcCCCCCCCcccccc
Q 017054 162 AMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRN-RYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRA 240 (378)
Q Consensus 162 ~~~~~~~~i~l~i~~~l~~~~v~~L~~~hlylI~~N~TT~E~~r~-r~~~~~nPyd~G~~~N~~evfg~~~~ps~~~fr~ 240 (378)
........++++++++++++++++|+.||+++|.+|+||+|.++. +.+.+.+||++|.++|++++||.+.+++....+.
T Consensus 197 ~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~ 276 (299)
T KOG1311|consen 197 IPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFA 276 (299)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCCCcccccccc
Confidence 222334456667788899999999999999999999999999884 4444469999999999999999998887766554
Q ss_pred c
Q 017054 241 K 241 (378)
Q Consensus 241 ~ 241 (378)
.
T Consensus 277 ~ 277 (299)
T KOG1311|consen 277 R 277 (299)
T ss_pred c
Confidence 3
|
|
| >KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| d2ayja1 | 56 | Ribosomal protein L40e {Sulfolobus solfataricus [T | 80.5 |
| >d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Rubredoxin-like superfamily: Zn-binding ribosomal proteins family: Ribosomal protein L40e domain: Ribosomal protein L40e species: Sulfolobus solfataricus [TaxId: 2287]
Probab=80.50 E-value=0.41 Score=32.72 Aligned_cols=25 Identities=28% Similarity=0.680 Sum_probs=22.3
Q ss_pred eeeecccCCcccCCCCccCccCCcc
Q 017054 79 KIKYCDTCMHYRPPRCSHCSICNNC 103 (378)
Q Consensus 79 ~~k~C~tC~i~rPpRs~HC~~C~~C 103 (378)
..+.|..|...-|+|+..|+.|+.=
T Consensus 18 ~k~ICrkC~AR~p~rAt~CRKCg~~ 42 (56)
T d2ayja1 18 LKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCCC
T ss_pred hhHHHhhccccCCccccccccCCCC
Confidence 5688999999999999999988763
|