Citrus Sinensis ID: 017054


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGEAVREADGSEGRTNNDDNVDKLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQVPGSSNGNLTRENQQVQTNLKV
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccccccccccccccccEEEEEccEEEEEEEcccEEEccccccccccccccHHHHcccccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHEEEEHHHHHHHHHHHHHHHHHEEEEccccccccEEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccEcc
mdnfphhlGISIMVIVIALTLFALILLLLtsgrdpgviarnanppelegyegtevgpgqtpqlclprtkdvvVNGVVVKIKYcdtcmhyrpprcshcsicnncvqkfdhhcpwvgqciglrnYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRydehvnpynkgVIKNFMEVFCtsiptsknnfrakipkepaitsrrisggftspnirkpvsdiemgRKLAWGEAvreadgsegrtnnddnvdklggsadhvtadlsrilppegmegrsishhrrsswgiksgswdiSSETFASAVEaskqvpgssngnltrenQQVQTNLKV
MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSiptsknnfrakipkepaitsrrisggftspnirkpvsdieMGRKLAWGEAVreadgsegrtnnddnvdkLGGSADHvtadlsrilppegmegrsishhrrsswgiksgSWDISSETFASAVEASkqvpgssngnltrenqqvqtnlkv
MDNFPHHLGISIMVIVialtlfalilllltSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDvvvngvvvKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGEAVREADGSEGRTNNDDNVDKLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQVPGSSNGNLTRENQQVQTNLKV
*****HHLGISIMVIVIALTLFALILLLLTSGRDPGVIA*********************PQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTS************************************************************************************************************************************************
MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPEL******************PRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKI****************************************************************************************************************************************
MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGE***********TNNDDNVDKLGGSADHVTADLSRILPPEGM*************GIKSGSWDISSETFASA***********NGNLTRE**********
MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPE***********GQTPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKIP***************************************************************************************************************************************
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRAKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGEAVREADGSEGRTNNDDNVDKLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQVPGSSNGNLTRENQQVQTNLKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
Q0WQK2443 Probable S-acyltransferas yes no 0.936 0.799 0.586 1e-125
Q9M306476 Probable S-acyltransferas no no 0.883 0.701 0.599 1e-120
Q9FLM3410 Probable S-acyltransferas no no 0.867 0.8 0.580 1e-110
Q9SB58407 Probable S-acyltransferas no no 0.891 0.828 0.464 5e-89
Q9M1K5477 Probable S-acyltransferas no no 0.632 0.501 0.565 2e-81
Q8VYS8407 Probable S-acyltransferas no no 0.624 0.579 0.551 2e-77
Q5PNZ1413 Probable S-acyltransferas no no 0.751 0.687 0.474 2e-75
O80685411 Probable S-acyltransferas no no 0.576 0.530 0.533 2e-67
B3DN87338 Probable S-acyltransferas no no 0.605 0.677 0.527 4e-65
Q8IZN3488 Probable palmitoyltransfe yes no 0.619 0.479 0.392 4e-48
>sp|Q0WQK2|ZDHC9_ARATH Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1 Back     alignment and function desciption
 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/358 (58%), Positives = 261/358 (72%), Gaps = 4/358 (1%)

Query: 1   MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGT-EVGPGQ 59
           +D+F    G+SI+ + +  T++ LILLLLTSGRDPG+I RNA+PPE E  +G  + G GQ
Sbjct: 68  IDDFSDSWGVSIVAVAVVFTIYDLILLLLTSGRDPGIIPRNAHPPEPETLDGNMDAGAGQ 127

Query: 60  TPQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIG 119
           TPQL LPR K+V +NG+  K+KYCDTCM YRPPRCSHCSICNNCV++FDHHCPWVGQCIG
Sbjct: 128 TPQLRLPRIKEVQLNGITFKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIG 187

Query: 120 LRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFIS 179
           +RNYRFFFMFVFSTTLLCIYV AFCW+ IRKIM  E+ + WKAM K+PASI LIIYTFIS
Sbjct: 188 MRNYRFFFMFVFSTTLLCIYVFAFCWVYIRKIMESEHTTTWKAMLKTPASIVLIIYTFIS 247

Query: 180 VWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFR 239
           +WFVGGLTVFH YLIS NQ+TYENFR RYD   NP+NKGV+ NF E F ++IP SKN+FR
Sbjct: 248 MWFVGGLTVFHLYLISTNQTTYENFRYRYDRRSNPHNKGVVNNFKETFFSTIPPSKNDFR 307

Query: 240 AKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGE-AVREADGSEGRTNNDDNVD 298
           A + +EP +  R ++GGF SPN+ K   +IEMGRK  W +     +D  +G+  N++ + 
Sbjct: 308 AMVQREPPLPPRSVAGGFMSPNMGKANDEIEMGRKAVWADMGPAMSDHGDGKHGNNERLH 367

Query: 299 KLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQ 356
              G    ++ D+   +  +    R   H RRSSWG KSGSWD+S E  A A    +Q
Sbjct: 368 VKDGELGELSPDIRATV--DEQSDRPSMHPRRSSWGRKSGSWDMSPEVMALAARVGEQ 423





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9M306|ZDH10_ARATH Probable S-acyltransferase At3g48760 OS=Arabidopsis thaliana GN=At3g48760 PE=1 SV=2 Back     alignment and function description
>sp|Q9FLM3|ZDH23_ARATH Probable S-acyltransferase At5g41060 OS=Arabidopsis thaliana GN=At5g41060 PE=2 SV=1 Back     alignment and function description
>sp|Q9SB58|ZDH19_ARATH Probable S-acyltransferase At4g24630 OS=Arabidopsis thaliana GN=At4g24630 PE=1 SV=2 Back     alignment and function description
>sp|Q9M1K5|ZDH13_ARATH Probable S-acyltransferase At3g56930 OS=Arabidopsis thaliana GN=At3g56930 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYS8|ZDH24_ARATH Probable S-acyltransferase At5g50020 OS=Arabidopsis thaliana GN=At5g50020 PE=1 SV=1 Back     alignment and function description
>sp|Q5PNZ1|ZDH21_ARATH Probable S-acyltransferase At5g05070 OS=Arabidopsis thaliana GN=At5g05070 PE=2 SV=1 Back     alignment and function description
>sp|O80685|ZDHC4_ARATH Probable S-acyltransferase At2g40990 OS=Arabidopsis thaliana GN=At2g40990 PE=2 SV=3 Back     alignment and function description
>sp|B3DN87|ZDH12_ARATH Probable S-acyltransferase At3g56920 OS=Arabidopsis thaliana GN=At3g56920 PE=2 SV=1 Back     alignment and function description
>sp|Q8IZN3|ZDH14_HUMAN Probable palmitoyltransferase ZDHHC14 OS=Homo sapiens GN=ZDHHC14 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
225456422446 PREDICTED: probable S-acyltransferase At 0.955 0.809 0.703 1e-144
255543657443 zinc finger protein, putative [Ricinus c 0.973 0.830 0.649 1e-140
224134088450 predicted protein [Populus trichocarpa] 0.978 0.822 0.640 1e-138
147863413 500 hypothetical protein VITISV_001671 [Viti 0.955 0.722 0.607 1e-138
297734469419 unnamed protein product [Vitis vinifera] 0.896 0.809 0.685 1e-138
224119754457 predicted protein [Populus trichocarpa] 0.994 0.822 0.638 1e-137
225451529452 PREDICTED: probable S-acyltransferase At 0.936 0.783 0.650 1e-137
356559470438 PREDICTED: probable S-acyltransferase At 0.970 0.837 0.616 1e-135
296082308 489 unnamed protein product [Vitis vinifera] 0.880 0.680 0.643 1e-133
449460541450 PREDICTED: probable S-acyltransferase At 0.981 0.824 0.626 1e-133
>gi|225456422|ref|XP_002284252.1| PREDICTED: probable S-acyltransferase At3g26935 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/364 (70%), Positives = 292/364 (80%), Gaps = 3/364 (0%)

Query: 1   MDNFPHHLGISIMVIVIALTLFALILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQT 60
           MD+FPHHLGISIMV+VIA TL+ L+LLLLTSGRDPG+I RNA+PPE EGY+GTEVG GQT
Sbjct: 73  MDDFPHHLGISIMVVVIAFTLYILVLLLLTSGRDPGIIPRNAHPPEPEGYDGTEVGAGQT 132

Query: 61  PQLCLPRTKDVVVNGVVVKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGL 120
           PQL LPRTKDVVVNG+ VK+KYCDTCM YRPPRCSHCSICNNCV++FDHHCPWVGQCIGL
Sbjct: 133 PQLRLPRTKDVVVNGITVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGL 192

Query: 121 RNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISV 180
           RNYRFFFMFVFSTTLLC+YV  FCW+ I +IM+G+  +IWKAM K+PASI LI+YTF++V
Sbjct: 193 RNYRFFFMFVFSTTLLCVYVFGFCWVYIMRIMDGKETTIWKAMAKTPASIVLIVYTFVAV 252

Query: 181 WFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRA 240
           WFVGGL+VFH YLIS NQSTYENFR RYD   NPYNKGVI+NFME+FCTSIP+SKNNFRA
Sbjct: 253 WFVGGLSVFHLYLISTNQSTYENFRYRYDRRANPYNKGVIENFMEIFCTSIPSSKNNFRA 312

Query: 241 KIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGEAVREADGSEGRTNNDDNVDKL 300
           K+PKEP I +R + GGF SP + K  +DIEMGRK  W EA  EA   E + +NDD VDK 
Sbjct: 313 KVPKEPEIPARTVGGGFVSPILGKDAADIEMGRKPFWDEAAAEAGEYERQLSNDDGVDKD 372

Query: 301 GGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVE--ASKQVP 358
           G   D V+   SR L  EG EG    HHRRSSWG  SGSWDIS E  A   E  ++ +V 
Sbjct: 373 GEFTD-VSPYSSRALHAEGTEGPGALHHRRSSWGRASGSWDISPEVIAMVAEVGSANRVS 431

Query: 359 GSSN 362
           G S 
Sbjct: 432 GGST 435




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543657|ref|XP_002512891.1| zinc finger protein, putative [Ricinus communis] gi|223547902|gb|EEF49394.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224134088|ref|XP_002321733.1| predicted protein [Populus trichocarpa] gi|222868729|gb|EEF05860.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147863413|emb|CAN81512.1| hypothetical protein VITISV_001671 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297734469|emb|CBI15716.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224119754|ref|XP_002318154.1| predicted protein [Populus trichocarpa] gi|222858827|gb|EEE96374.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225451529|ref|XP_002273157.1| PREDICTED: probable S-acyltransferase At3g26935 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356559470|ref|XP_003548022.1| PREDICTED: probable S-acyltransferase At3g26935-like [Glycine max] Back     alignment and taxonomy information
>gi|296082308|emb|CBI21313.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449460541|ref|XP_004148004.1| PREDICTED: probable S-acyltransferase At3g26935-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
TAIR|locus:2091960443 AT3G26935 "AT3G26935" [Arabido 0.973 0.830 0.547 1.1e-110
TAIR|locus:2099483476 AT3G48760 [Arabidopsis thalian 0.883 0.701 0.571 2.1e-107
TAIR|locus:2163001410 AT5G41060 [Arabidopsis thalian 0.867 0.8 0.544 1.1e-96
TAIR|locus:2121949407 AT4G24630 [Arabidopsis thalian 0.849 0.788 0.446 5.7e-75
TAIR|locus:2080555477 AT3G56930 [Arabidopsis thalian 0.568 0.450 0.572 2.6e-70
TAIR|locus:2175349413 AT5G05070 "AT5G05070" [Arabido 0.716 0.656 0.464 5.2e-65
TAIR|locus:2063172411 AT2G40990 [Arabidopsis thalian 0.563 0.518 0.518 1.2e-60
TAIR|locus:2103650338 AT3G56920 [Arabidopsis thalian 0.558 0.624 0.515 2e-56
MGI|MGI:2444393364 Zdhhc9 "zinc finger, DHHC doma 0.619 0.642 0.396 6.6e-42
RGD|1561389364 Zdhhc9 "zinc finger, DHHC-type 0.619 0.642 0.396 6.6e-42
TAIR|locus:2091960 AT3G26935 "AT3G26935" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 206/376 (54%), Positives = 255/376 (67%)

Query:     1 MDNFPHHLGISIMVIVXXXXXXXXXXXXXXSGRDPGVIARNANPPELEGYEGT-EVGPGQ 59
             +D+F    G+SI+ +               SGRDPG+I RNA+PPE E  +G  + G GQ
Sbjct:    68 IDDFSDSWGVSIVAVAVVFTIYDLILLLLTSGRDPGIIPRNAHPPEPETLDGNMDAGAGQ 127

Query:    60 TPQLCLPRTKDXXXXXXXXKIKYCDTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIG 119
             TPQL LPR K+        K+KYCDTCM YRPPRCSHCSICNNCV++FDHHCPWVGQCIG
Sbjct:   128 TPQLRLPRIKEVQLNGITFKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIG 187

Query:   120 LRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFIS 179
             +RNYRFFFMFVFSTTLLCIYV AFCW+ IRKIM  E+ + WKAM K+PASI LIIYTFIS
Sbjct:   188 MRNYRFFFMFVFSTTLLCIYVFAFCWVYIRKIMESEHTTTWKAMLKTPASIVLIIYTFIS 247

Query:   180 VWFVGGLTVFHSYLISRNQSTYENFRNRYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFR 239
             +WFVGGLTVFH YLIS NQ+TYENFR RYD   NP+NKGV+ NF E F ++IP SKN+FR
Sbjct:   248 MWFVGGLTVFHLYLISTNQTTYENFRYRYDRRSNPHNKGVVNNFKETFFSTIPPSKNDFR 307

Query:   240 AKIPKEPAITSRRISGGFTSPNIRKPVSDIEMGRKLAWGE-AVREADGSEGRTNNDDNVD 298
             A + +EP +  R ++GGF SPN+ K   +IEMGRK  W +     +D  +G+  N++ + 
Sbjct:   308 AMVQREPPLPPRSVAGGFMSPNMGKANDEIEMGRKAVWADMGPAMSDHGDGKHGNNERLH 367

Query:   299 KLGGSADHVTADLSRILPPEGMEGRSISHHRRSSWGIKSGSWDISSETFASAVEASKQVP 358
                G    ++ D+   +  +    R   H RRSSWG KSGSWD+S E  A A    +Q  
Sbjct:   368 VKDGELGELSPDIRATVDEQS--DRPSMHPRRSSWGRKSGSWDMSPEVMALAARVGEQNQ 425

Query:   359 ---GSSNGN-LTRENQ 370
                GSS+G+ L  EN+
Sbjct:   426 NGGGSSSGSGLVTENR 441




GO:0008150 "biological_process" evidence=ND
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2099483 AT3G48760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163001 AT5G41060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121949 AT4G24630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080555 AT3G56930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175349 AT5G05070 "AT5G05070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063172 AT2G40990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103650 AT3G56920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:2444393 Zdhhc9 "zinc finger, DHHC domain containing 9" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1561389 Zdhhc9 "zinc finger, DHHC-type containing 9" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0WQK2ZDHC9_ARATH2, ., 3, ., 1, ., -0.58650.93650.7990yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00017993001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (446 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
pfam01529167 pfam01529, zf-DHHC, DHHC palmitoyltransferase 8e-43
COG5273309 COG5273, COG5273, Uncharacterized protein containi 2e-34
>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase Back     alignment and domain information
 Score =  146 bits (370), Expect = 8e-43
 Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 17/184 (9%)

Query: 24  LILLLLTSGRDPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYC 83
           L     T   DPG + +N    E E                    ++        ++K+C
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQ----------------PDEESEEGDEEDELKFC 44

Query: 84  DTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAF 143
            TC   +PPR  HC +CN CV +FDHHCPW+  CIG RN+++F +F+   TL  I +   
Sbjct: 45  STCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVL 104

Query: 144 CWIRIRKIMNGENVSIWKAMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYEN 203
            +  +  ++    +  +  ++   + I L++  F  ++ +  L  FH YLI +N +TYE 
Sbjct: 105 SFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLF-LSFLLFFHLYLILKNITTYEY 163

Query: 204 FRNR 207
            + +
Sbjct: 164 IKKK 167


This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 100.0
KOG1315307 consensus Predicted DHHC-type Zn-finger protein [G 100.0
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 100.0
KOG1314414 consensus DHHC-type Zn-finger protein [General fun 100.0
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 100.0
KOG1313309 consensus DHHC-type Zn-finger proteins [General fu 100.0
KOG1312341 consensus DHHC-type Zn-finger proteins [General fu 99.97
KOG0509600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.94
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 95.11
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 92.98
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 92.65
KOG0509600 consensus Ankyrin repeat and DHHC-type Zn-finger d 92.38
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=1.1e-47  Score=374.38  Aligned_cols=222  Identities=37%  Similarity=0.690  Sum_probs=181.7

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHcc---CCcccCCCCCCCCccCCCCCCCCCCCCCCcCCCCcceeEecceEeeeeec
Q 017054            7 HLGISIMVIVIALTLFALILLLLTSGR---DPGVIARNANPPELEGYEGTEVGPGQTPQLCLPRTKDVVVNGVVVKIKYC   83 (378)
Q Consensus         7 ~~g~~i~vi~~vl~i~~li~l~~ts~~---DPGiiPr~~~~~~~e~~~~~e~~~g~~p~~~~p~~k~v~vng~~~~~k~C   83 (378)
                      ..+..+.++..+++++.++.++.++.+   |||++|++..+.    .+   .    .+  +.++.+++.++|..++.+||
T Consensus        50 ~~~~~~~~~~~if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~----~~---~----~~--~~~~~~~~~~~~~~~~~~~C  116 (299)
T KOG1311|consen   50 GVSPAVLVLGAIFFLLNILNLMLACFRMLSDPGIVPRADDEQ----IE---D----PE--RAPLYKNVDVNGIQVEWKYC  116 (299)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhcccCCCceecCcccCC----CC---C----cc--ccccCCCcccCCcccceEEc
Confidence            456788888888888888888888877   999999975110    01   0    01  45678889999999999999


Q ss_pred             ccCCcccCCCCccCccCCcccccCCccCccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCchhhh--h
Q 017054           84 DTCMHYRPPRCSHCSICNNCVQKFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVHAFCWIRIRKIMNGENVSIW--K  161 (378)
Q Consensus        84 ~tC~i~rPpRs~HC~~C~~CV~rfDHHCpWvgnCIG~rN~r~F~lFL~~~~l~~i~~~~~~~~~i~~~~~~~~~~~~--~  161 (378)
                      .+|+.+||||||||++||+||+||||||||+|||||+||||||++|++++++++++.+++++..+...........+  .
T Consensus       117 ~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  196 (299)
T KOG1311|consen  117 DTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVL  196 (299)
T ss_pred             CcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999988887665443333322  2


Q ss_pred             hhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhc-ccCCCCCCCCHHHHHHHHHhcCCCCCCCcccccc
Q 017054          162 AMTKSPASIALIIYTFISVWFVGGLTVFHSYLISRNQSTYENFRN-RYDEHVNPYNKGVIKNFMEVFCTSIPTSKNNFRA  240 (378)
Q Consensus       162 ~~~~~~~~i~l~i~~~l~~~~v~~L~~~hlylI~~N~TT~E~~r~-r~~~~~nPyd~G~~~N~~evfg~~~~ps~~~fr~  240 (378)
                      ........++++++++++++++++|+.||+++|.+|+||+|.++. +.+.+.+||++|.++|++++||.+.+++....+.
T Consensus       197 ~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~  276 (299)
T KOG1311|consen  197 IPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFA  276 (299)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCCCcccccccc
Confidence            222334456667788899999999999999999999999999884 4444469999999999999999998887766554


Q ss_pred             c
Q 017054          241 K  241 (378)
Q Consensus       241 ~  241 (378)
                      .
T Consensus       277 ~  277 (299)
T KOG1311|consen  277 R  277 (299)
T ss_pred             c
Confidence            3



>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d2ayja156 Ribosomal protein L40e {Sulfolobus solfataricus [T 80.5
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]
Probab=80.50  E-value=0.41  Score=32.72  Aligned_cols=25  Identities=28%  Similarity=0.680  Sum_probs=22.3

Q ss_pred             eeeecccCCcccCCCCccCccCCcc
Q 017054           79 KIKYCDTCMHYRPPRCSHCSICNNC  103 (378)
Q Consensus        79 ~~k~C~tC~i~rPpRs~HC~~C~~C  103 (378)
                      ..+.|..|...-|+|+..|+.|+.=
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~~   42 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHST   42 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCCC
T ss_pred             hhHHHhhccccCCccccccccCCCC
Confidence            5688999999999999999988763